Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGACCCTGAAAGCTTCACGCTACCTTGCTCAATTGGCAGGATCGATCTAGGTCGTGCTCTATGTGACTTGGGAGCAAGCATTAATTTGATGCCTCTTTCTATATATTTAAGAAGTTGAAGACAAGGGAGCTGCAACCAACTCATACGAGAGTCCAATTTGTTCGTAGGTCCACTTTCAAACCTAAGGACGAGATTGAAGATGTTTTGGTTAAGGTGGACAAATTTTTACTTCTCACAAACTTTGTCAGTCTGGACTATGAAGCTAATCGGAAGGTACCTATCATTTTAGGGCGGCCATTCCAATCAACTGGTCGTGCCCTCATACATGTCCACCAAGGGGAACTTACAATGCTTTTTAATGACGAAAAAATTACATTTAATGTGGCTAACGCAATGAAGTTCCCTGATGATGTTGCGAGTTGCAATATAAAAGAGTTCCTGGGTTGGGACTATTAG
mRNA sequence
ATGGCAGACCCTGAAAGCTTCACGCTACCTTGCTCAATTGGCAGGATCGATCTAGGTCGTGCTCTATGTGACTTGGGAGCAAGCATTAATTTGATGCCTCTTTCTATATATTTAAGAATCCAATTTGTTCGTAGGTCCACTTTCAAACCTAAGGACGAGATTGAAGATGTTTTGGTTAAGGTGGACAAATTTTTACTTCTCACAAACTTTGTCAGTCTGGACTATGAAGCTAATCGGAAGGTACCTATCATTTTAGGGCGGCCATTCCAATCAACTGGTCGTGCCCTCATACATGTCCACCAAGGGGAACTTACAATGCTTTTTAATGACGAAAAAATTACATTTAATGTGGCTAACGCAATGAAGTTCCCTGATGATGTTGCGAGTTGCAATATAAAAGAGTTCCTGGGTTGGGACTATTAG
Coding sequence (CDS)
ATGGCAGACCCTGAAAGCTTCACGCTACCTTGCTCAATTGGCAGGATCGATCTAGGTCGTGCTCTATGTGACTTGGGAGCAAGCATTAATTTGATGCCTCTTTCTATATATTTAAGAATCCAATTTGTTCGTAGGTCCACTTTCAAACCTAAGGACGAGATTGAAGATGTTTTGGTTAAGGTGGACAAATTTTTACTTCTCACAAACTTTGTCAGTCTGGACTATGAAGCTAATCGGAAGGTACCTATCATTTTAGGGCGGCCATTCCAATCAACTGGTCGTGCCCTCATACATGTCCACCAAGGGGAACTTACAATGCTTTTTAATGACGAAAAAATTACATTTAATGTGGCTAACGCAATGAAGTTCCCTGATGATGTTGCGAGTTGCAATATAAAAGAGTTCCTGGGTTGGGACTATTAG
Protein sequence
MADPESFTLPCSIGRIDLGRALCDLGASINLMPLSIYLRIQFVRRSTFKPKDEIEDVLVKVDKFLLLTNFVSLDYEANRKVPIILGRPFQSTGRALIHVHQGELTMLFNDEKITFNVANAMKFPDDVASCNIKEFLGWDY
Homology
BLAST of IVF0004313 vs. ExPASy TrEMBL
Match:
A0A5A7VJ95 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00710 PE=4 SV=1)
HSP 1 Score: 174.1 bits (440), Expect = 4.1e-40
Identity = 91/149 (61.07%), Postives = 107/149 (71.81%), Query Frame = 0
Query: 1 MADPESFTLPCSIGRIDLGRALCDLGASINLMPLSIY------------LRIQFVRRSTF 60
M D SFT+PCSI +DLG LCDLGASINLMPLSI+ +R+QFV RS
Sbjct: 120 MTDCRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMRLQFVDRSIA 179
Query: 61 KPKDEIEDVLVKVDKFLLLTNFVSLDYEANRKVPIILGRPFQSTGRALIHVHQGELTMLF 120
K + +IED+LVKVDKFL +F+ LDYEAN++VPII GRPF STG ALI VHQGELTM F
Sbjct: 180 KHEGKIEDILVKVDKFLFHADFIILDYEANQEVPIIFGRPFLSTGHALIDVHQGELTMRF 239
Query: 121 NDEKITFNVANAMKFPDDVASCNIKEFLG 138
NDE + FNV NAMKFP D + ++ E LG
Sbjct: 240 NDE-VKFNVMNAMKFPTDDKNYSMIESLG 267
BLAST of IVF0004313 vs. ExPASy TrEMBL
Match:
A0A1S3CN55 (uncharacterized protein LOC103502805 OS=Cucumis melo OX=3656 GN=LOC103502805 PE=4 SV=1)
HSP 1 Score: 174.1 bits (440), Expect = 4.1e-40
Identity = 91/149 (61.07%), Postives = 107/149 (71.81%), Query Frame = 0
Query: 1 MADPESFTLPCSIGRIDLGRALCDLGASINLMPLSIY------------LRIQFVRRSTF 60
M D SFT+PCSI +DLG LCDLGASINLMPLSI+ +R+QFV RS
Sbjct: 31 MTDCRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMRLQFVDRSIA 90
Query: 61 KPKDEIEDVLVKVDKFLLLTNFVSLDYEANRKVPIILGRPFQSTGRALIHVHQGELTMLF 120
K + +IED+LVKVDKFL +F+ LDYEAN++VPII GRPF STG ALI VHQGELTM F
Sbjct: 91 KHEGKIEDILVKVDKFLFHADFIILDYEANQEVPIIFGRPFLSTGHALIDVHQGELTMRF 150
Query: 121 NDEKITFNVANAMKFPDDVASCNIKEFLG 138
NDE + FNV NAMKFP D + ++ E LG
Sbjct: 151 NDE-VKFNVMNAMKFPTDDKNYSMIESLG 178
BLAST of IVF0004313 vs. ExPASy TrEMBL
Match:
A0A5D3DPZ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00150 PE=4 SV=1)
HSP 1 Score: 165.6 bits (418), Expect = 1.5e-37
Identity = 86/140 (61.43%), Postives = 100/140 (71.43%), Query Frame = 0
Query: 1 MADPESFTLPCSIGRIDLGRALCDLGASINLMPLSIYLRIQFVRRSTFKPKDEIEDVLVK 60
M DP SFT+ S G +DLG ALCDLGASINLMPLSI+ ++ + +IEDVLVK
Sbjct: 42 MTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGI-------GEGKIEDVLVK 101
Query: 61 VDKFLLLTNFVSLDYEANRKVPIILGRPFQSTGRALIHVHQGELTMLFNDEKITFNVANA 120
VDKFL +FV LDY+A+RKVPIILGRPF ST LI VHQGELTM FNDE+I FNV
Sbjct: 102 VDKFLFSEDFVILDYKADRKVPIILGRPFLSTSCTLIGVHQGELTMHFNDEEIKFNVVKP 161
Query: 121 MKFPDDVASCNIKEFLGWDY 141
MKFP DV + + + GWDY
Sbjct: 162 MKFPSDVENYSAIKSFGWDY 174
BLAST of IVF0004313 vs. ExPASy TrEMBL
Match:
A0A1S3BHX3 (uncharacterized protein LOC103490055 OS=Cucumis melo OX=3656 GN=LOC103490055 PE=4 SV=1)
HSP 1 Score: 163.7 bits (413), Expect = 5.6e-37
Identity = 86/148 (58.11%), Postives = 101/148 (68.24%), Query Frame = 0
Query: 1 MADPESFTLPCSIGRIDLGRALCDLGASINLMPLSIY------------LRIQFVRRSTF 60
M P SF +PCSI +DLG LCDLGASINLMPLSI+ +R Q RS
Sbjct: 42 MTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSIT 101
Query: 61 KPKDEIEDVLVKVDKFLLLTNFVSLDYEANRKVPIILGRPFQSTGRALIHVHQGELTMLF 120
PK +IEDVLVKVDKFL +F+ LDYEA+ +V IIL R F STGRAL ++HQGELT+ F
Sbjct: 102 NPKGKIEDVLVKVDKFLFFADFIILDYEADEEVLIILRRLFLSTGRALTYIHQGELTVFF 161
Query: 121 NDEKITFNVANAMKFPDDVASCNIKEFL 137
N+++I FNV NAMKFP D SCN E L
Sbjct: 162 NNKEIKFNVINAMKFPLDDESCNTIESL 189
BLAST of IVF0004313 vs. ExPASy TrEMBL
Match:
A0A6J1DY39 (uncharacterized protein LOC111025653 OS=Momordica charantia OX=3673 GN=LOC111025653 PE=4 SV=1)
HSP 1 Score: 161.8 bits (408), Expect = 2.1e-36
Identity = 80/144 (55.56%), Postives = 103/144 (71.53%), Query Frame = 0
Query: 1 MADPESFTLPCSIGRIDLGRALCDLGASINLMPLSIY------------LRIQFVRRSTF 60
+ DP SFT+PC IG D+GRALCDLGASINLMPLSI+ + +Q RS
Sbjct: 612 LKDPGSFTIPCLIGGKDVGRALCDLGASINLMPLSIFKKFEIGKASPTTVTLQLADRSIT 671
Query: 61 KPKDEIEDVLVKVDKFLLLTNFVSLDYEANRKVPIILGRPFQSTGRALIHVHQGELTMLF 120
KP+ +IEDVLVKVDKF+ T+F+ LD EA++ VPIILGRPF +TG LI V +GELTM
Sbjct: 672 KPEGKIEDVLVKVDKFIFPTDFIILDCEADKDVPIILGRPFLATGETLIDVKKGELTMRV 731
Query: 121 NDEKITFNVANAMKFPDDVASCNI 133
+D+K+TFN+ +AMK+ DD+ C +
Sbjct: 732 DDQKVTFNMLDAMKYXDDMEECAV 755
BLAST of IVF0004313 vs. NCBI nr
Match:
XP_008465121.1 (PREDICTED: uncharacterized protein LOC103502805 [Cucumis melo])
HSP 1 Score: 172 bits (435), Expect = 2.33e-51
Identity = 91/149 (61.07%), Postives = 107/149 (71.81%), Query Frame = 0
Query: 1 MADPESFTLPCSIGRIDLGRALCDLGASINLMPLSIY------------LRIQFVRRSTF 60
M D SFT+PCSI +DLG LCDLGASINLMPLSI+ +R+QFV RS
Sbjct: 31 MTDCRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMRLQFVDRSIA 90
Query: 61 KPKDEIEDVLVKVDKFLLLTNFVSLDYEANRKVPIILGRPFQSTGRALIHVHQGELTMLF 120
K + +IED+LVKVDKFL +F+ LDYEAN++VPII GRPF STG ALI VHQGELTM F
Sbjct: 91 KHEGKIEDILVKVDKFLFHADFIILDYEANQEVPIIFGRPFLSTGHALIDVHQGELTMRF 150
Query: 121 NDEKITFNVANAMKFPDDVASCNIKEFLG 137
NDE + FNV NAMKFP D + ++ E LG
Sbjct: 151 NDE-VKFNVMNAMKFPTDDKNYSMIESLG 178
BLAST of IVF0004313 vs. NCBI nr
Match:
XP_030478287.1 (uncharacterized protein LOC115695357 [Cannabis sativa])
HSP 1 Score: 168 bits (426), Expect = 2.72e-49
Identity = 83/143 (58.04%), Postives = 104/143 (72.73%), Query Frame = 0
Query: 1 MADPESFTLPCSIGRIDLGRALCDLGASINLMPLSIYLRI------------QFVRRSTF 60
+ DP SFT+PCSIG D+GRALCDLGASINLMP+SI+ ++ Q RS
Sbjct: 91 LKDPGSFTIPCSIGGRDVGRALCDLGASINLMPMSIFKKLGIGEARPTTVTLQLADRSMA 150
Query: 61 KPKDEIEDVLVKVDKFLLLTNFVSLDYEANRKVPIILGRPFQSTGRALIHVHQGELTMLF 120
P+ +IEDVLV+VDKF+ +F+ LDYEA+R VPIILGRPF +TGR LI V GELTM
Sbjct: 151 HPEGKIEDVLVQVDKFIFPADFIILDYEADRDVPIILGRPFLATGRTLIDVQNGELTMRV 210
Query: 121 NDEKITFNVANAMKFPDDVASCN 131
ND+K+TFNV NAM+FPD++ C+
Sbjct: 211 NDQKVTFNVFNAMRFPDEIEECS 233
BLAST of IVF0004313 vs. NCBI nr
Match:
XP_030504924.1 (uncharacterized protein LOC115719886 [Cannabis sativa])
HSP 1 Score: 168 bits (426), Expect = 6.10e-49
Identity = 83/143 (58.04%), Postives = 104/143 (72.73%), Query Frame = 0
Query: 1 MADPESFTLPCSIGRIDLGRALCDLGASINLMPLSIYLRI------------QFVRRSTF 60
+ DP SFT+PCSIG D+GRALCDLGASINLMP+SI+ ++ Q RS
Sbjct: 10 LKDPGSFTIPCSIGGRDVGRALCDLGASINLMPMSIFKKLGIGEARPTTVTLQLADRSMA 69
Query: 61 KPKDEIEDVLVKVDKFLLLTNFVSLDYEANRKVPIILGRPFQSTGRALIHVHQGELTMLF 120
P+ +IEDVLV+VDKF+ +F+ LDYEA+R VPIILGRPF +TGR LI V GELTM
Sbjct: 70 HPEGKIEDVLVQVDKFIFPADFIILDYEADRDVPIILGRPFLATGRTLIDVQNGELTMRV 129
Query: 121 NDEKITFNVANAMKFPDDVASCN 131
ND+K+TFNV NAM+FPD++ C+
Sbjct: 130 NDQKVTFNVFNAMRFPDEIEECS 152
BLAST of IVF0004313 vs. NCBI nr
Match:
XP_030477929.1 (uncharacterized protein LOC115694963 [Cannabis sativa])
HSP 1 Score: 168 bits (426), Expect = 1.13e-48
Identity = 83/143 (58.04%), Postives = 104/143 (72.73%), Query Frame = 0
Query: 1 MADPESFTLPCSIGRIDLGRALCDLGASINLMPLSIYLRI------------QFVRRSTF 60
+ DP SFT+PCSIG D+GRALCDLGASINLMP+SI+ ++ Q RS
Sbjct: 70 LKDPGSFTIPCSIGGRDVGRALCDLGASINLMPMSIFKKLGIGEARPTTVTLQLADRSMA 129
Query: 61 KPKDEIEDVLVKVDKFLLLTNFVSLDYEANRKVPIILGRPFQSTGRALIHVHQGELTMLF 120
P+ +IEDVLV+VDKF+ +F+ LDYEA+R VPIILGRPF +TGR LI V GELTM
Sbjct: 130 HPEGKIEDVLVQVDKFIFPADFIILDYEADRDVPIILGRPFLATGRTLIDVQNGELTMRV 189
Query: 121 NDEKITFNVANAMKFPDDVASCN 131
ND+K+TFNV NAM+FPD++ C+
Sbjct: 190 NDQKVTFNVFNAMRFPDEIEECS 212
BLAST of IVF0004313 vs. NCBI nr
Match:
KAA0067858.1 (uncharacterized protein E6C27_scaffold2484G00710 [Cucumis melo var. makuwa])
HSP 1 Score: 172 bits (435), Expect = 1.15e-48
Identity = 91/149 (61.07%), Postives = 107/149 (71.81%), Query Frame = 0
Query: 1 MADPESFTLPCSIGRIDLGRALCDLGASINLMPLSIY------------LRIQFVRRSTF 60
M D SFT+PCSI +DLG LCDLGASINLMPLSI+ +R+QFV RS
Sbjct: 120 MTDCRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMRLQFVDRSIA 179
Query: 61 KPKDEIEDVLVKVDKFLLLTNFVSLDYEANRKVPIILGRPFQSTGRALIHVHQGELTMLF 120
K + +IED+LVKVDKFL +F+ LDYEAN++VPII GRPF STG ALI VHQGELTM F
Sbjct: 180 KHEGKIEDILVKVDKFLFHADFIILDYEANQEVPIIFGRPFLSTGHALIDVHQGELTMRF 239
Query: 121 NDEKITFNVANAMKFPDDVASCNIKEFLG 137
NDE + FNV NAMKFP D + ++ E LG
Sbjct: 240 NDE-VKFNVMNAMKFPTDDKNYSMIESLG 267
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7VJ95 | 4.1e-40 | 61.07 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A1S3CN55 | 4.1e-40 | 61.07 | uncharacterized protein LOC103502805 OS=Cucumis melo OX=3656 GN=LOC103502805 PE=... | [more] |
A0A5D3DPZ2 | 1.5e-37 | 61.43 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3BHX3 | 5.6e-37 | 58.11 | uncharacterized protein LOC103490055 OS=Cucumis melo OX=3656 GN=LOC103490055 PE=... | [more] |
A0A6J1DY39 | 2.1e-36 | 55.56 | uncharacterized protein LOC111025653 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
Match Name | E-value | Identity | Description | |
XP_008465121.1 | 2.33e-51 | 61.07 | PREDICTED: uncharacterized protein LOC103502805 [Cucumis melo] | [more] |
XP_030478287.1 | 2.72e-49 | 58.04 | uncharacterized protein LOC115695357 [Cannabis sativa] | [more] |
XP_030504924.1 | 6.10e-49 | 58.04 | uncharacterized protein LOC115719886 [Cannabis sativa] | [more] |
XP_030477929.1 | 1.13e-48 | 58.04 | uncharacterized protein LOC115694963 [Cannabis sativa] | [more] |
KAA0067858.1 | 1.15e-48 | 61.07 | uncharacterized protein E6C27_scaffold2484G00710 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |