IVF0004066 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATTCCGTTTGATAAACAGCCCAAGGAAATCATCATCGACTGTTCCAAAGGGGTTTTTGGCTGTCTACGTTGGAGAGACACAAAAGAGACGACATGTGATACCGATTTCTTACTTGAAGCATCCATCGTTTCAAGATTTGTTGAGTAAAGCTGAAGAAGAGTTCGGATTCGATCATCCAATGGGAGGATTGACGATCCCTTGTAATGAAGATGTATTCTTGAAAGTCACTTCTCGCTTGGCCAATTGTTGA ATGGGATTCCGTTTGATAAACAGCCCAAGGAAATCATCATCGACTGTTCCAAAGGGGTTTTTGGCTGTCTACGTTGGAGAGACACAAAAGAGACGACATGTGATACCGATTTCTTACTTGAAGCATCCATCGTTTCAAGATTTGTTGAGTAAAGCTGAAGAAGAGTTCGGATTCGATCATCCAATGGGAGGATTGACGATCCCTTGTAATGAAGATGTATTCTTGAAAGTCACTTCTCGCTTGGCCAATTGTTGA ATGGGATTCCGTTTGATAAACAGCCCAAGGAAATCATCATCGACTGTTCCAAAGGGGTTTTTGGCTGTCTACGTTGGAGAGACACAAAAGAGACGACATGTGATACCGATTTCTTACTTGAAGCATCCATCGTTTCAAGATTTGTTGAGTAAAGCTGAAGAAGAGTTCGGATTCGATCATCCAATGGGAGGATTGACGATCCCTTGTAATGAAGATGTATTCTTGAAAGTCACTTCTCGCTTGGCCAATTGTTGA MGFRLINSPRKSSSTVPKGFLAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFLKVTSRLANC Homology
BLAST of IVF0004066 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 6.7e-27 Identity = 53/72 (73.61%), Postives = 63/72 (87.50%), Query Frame = 0
BLAST of IVF0004066 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.1e-26 Identity = 52/78 (66.67%), Postives = 65/78 (83.33%), Query Frame = 0
BLAST of IVF0004066 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.5e-26 Identity = 52/77 (67.53%), Postives = 65/77 (84.42%), Query Frame = 0
BLAST of IVF0004066 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 2.0e-26 Identity = 51/78 (65.38%), Postives = 66/78 (84.62%), Query Frame = 0
BLAST of IVF0004066 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 3.3e-26 Identity = 52/78 (66.67%), Postives = 65/78 (83.33%), Query Frame = 0
BLAST of IVF0004066 vs. ExPASy TrEMBL
Match: A0A5D3CP52 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001290 PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.3e-41 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of IVF0004066 vs. ExPASy TrEMBL
Match: A0A1S3BI63 (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103490322 PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.3e-41 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of IVF0004066 vs. ExPASy TrEMBL
Match: A0A0A0K4I7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008440 PE=3 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.1e-40 Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0
BLAST of IVF0004066 vs. ExPASy TrEMBL
Match: A0A6J1HY12 (auxin-responsive protein SAUR21-like OS=Cucurbita maxima OX=3661 GN=LOC111468496 PE=3 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 7.9e-39 Identity = 81/85 (95.29%), Postives = 82/85 (96.47%), Query Frame = 0
BLAST of IVF0004066 vs. ExPASy TrEMBL
Match: A0A6J1C3M2 (auxin-responsive protein SAUR21-like OS=Momordica charantia OX=3673 GN=LOC111007637 PE=3 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 7.9e-39 Identity = 79/83 (95.18%), Postives = 81/83 (97.59%), Query Frame = 0
BLAST of IVF0004066 vs. NCBI nr
Match: XP_008448012.1 (PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo] >KAA0049686.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa] >TYK12186.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa]) HSP 1 Score: 176 bits (445), Expect = 1.85e-55 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of IVF0004066 vs. NCBI nr
Match: XP_011658572.1 (auxin-responsive protein SAUR21 [Cucumis sativus] >KGN43197.1 hypothetical protein Csa_020466 [Cucumis sativus]) HSP 1 Score: 172 bits (437), Expect = 3.07e-54 Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0
BLAST of IVF0004066 vs. NCBI nr
Match: XP_022952260.1 (auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_022969521.1 auxin-responsive protein SAUR21-like [Cucurbita maxima] >XP_023554332.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 166 bits (421), Expect = 8.77e-52 Identity = 81/85 (95.29%), Postives = 82/85 (96.47%), Query Frame = 0
BLAST of IVF0004066 vs. NCBI nr
Match: XP_022135747.1 (auxin-responsive protein SAUR21-like [Momordica charantia]) HSP 1 Score: 166 bits (420), Expect = 1.21e-51 Identity = 79/83 (95.18%), Postives = 81/83 (97.59%), Query Frame = 0
BLAST of IVF0004066 vs. NCBI nr
Match: KAG2335211.1 (hypothetical protein Bca52824_006391 [Brassica carinata]) HSP 1 Score: 127 bits (318), Expect = 5.58e-36 Identity = 57/72 (79.17%), Postives = 66/72 (91.67%), Query Frame = 0
BLAST of IVF0004066 vs. TAIR 10
Match: AT5G18030.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 120.9 bits (302), Expect = 4.8e-28 Identity = 53/72 (73.61%), Postives = 63/72 (87.50%), Query Frame = 0
BLAST of IVF0004066 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 120.2 bits (300), Expect = 8.1e-28 Identity = 52/78 (66.67%), Postives = 65/78 (83.33%), Query Frame = 0
BLAST of IVF0004066 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 119.8 bits (299), Expect = 1.1e-27 Identity = 52/77 (67.53%), Postives = 65/77 (84.42%), Query Frame = 0
BLAST of IVF0004066 vs. TAIR 10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 119.4 bits (298), Expect = 1.4e-27 Identity = 51/78 (65.38%), Postives = 66/78 (84.62%), Query Frame = 0
BLAST of IVF0004066 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 118.6 bits (296), Expect = 2.4e-27 Identity = 52/78 (66.67%), Postives = 65/78 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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