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IVF0003975 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAAATGTGGTTGTTTTGTGGCTCCTGATGGCGACTTGGGTGGCCGAAGCTCAAATTTCGAAGGATGTGGTAATAAGGGTACCGCCGGTGAGGTATTTCATTCATGTTGCAAATGATCTAACCAACCAAGATATGTTTGTGCATTGTCAGTCCAAGGACGATGATTTGAGAATTCAACATTTGGTCCATCGTGGAGATGAATTTCGATGGAACTTTAAGGAGAACTTTTGGAAAACAACTTTGTTTTGGTGCAGATTGGAGAAGTCAGATGCACATGTCTCTTTTAATGTCTTTTGGCCTGAGAGTAAGCACCACTGGCTTCGTGATCGATGTGGGAGTCAAGGAGTTTGTATTTGGTCTGCTAAAGATGATGGAATTTACTTGAGAAACCTACCCGCTCAAAATGAAGAATTTGTTCACAAATGGATCATTATTTGA ATGAGAAATGTGGTTGTTTTGTGGCTCCTGATGGCGACTTGGGTGGCCGAAGCTCAAATTTCGAAGGATGTGGTAATAAGGGTACCGCCGGTGAGGTATTTCATTCATGTTGCAAATGATCTAACCAACCAAGATATGTTTGTGCATTGTCAGTCCAAGGACGATGATTTGAGAATTCAACATTTGGTCCATCGTGGAGATGAATTTCGATGGAACTTTAAGGAGAACTTTTGGAAAACAACTTTGTTTTGGTGCAGATTGGAGAAGTCAGATGCACATGTCTCTTTTAATGTCTTTTGGCCTGAGAGTAAGCACCACTGGCTTCGTGATCGATGTGGGAGTCAAGGAGTTTGTATTTGGTCTGCTAAAGATGATGGAATTTACTTGAGAAACCTACCCGCTCAAAATGAAGAATTTGTTCACAAATGGATCATTATTTGA ATGAGAAATGTGGTTGTTTTGTGGCTCCTGATGGCGACTTGGGTGGCCGAAGCTCAAATTTCGAAGGATGTGGTAATAAGGGTACCGCCGGTGAGGTATTTCATTCATGTTGCAAATGATCTAACCAACCAAGATATGTTTGTGCATTGTCAGTCCAAGGACGATGATTTGAGAATTCAACATTTGGTCCATCGTGGAGATGAATTTCGATGGAACTTTAAGGAGAACTTTTGGAAAACAACTTTGTTTTGGTGCAGATTGGAGAAGTCAGATGCACATGTCTCTTTTAATGTCTTTTGGCCTGAGAGTAAGCACCACTGGCTTCGTGATCGATGTGGGAGTCAAGGAGTTTGTATTTGGTCTGCTAAAGATGATGGAATTTACTTGAGAAACCTACCCGCTCAAAATGAAGAATTTGTTCACAAATGGATCATTATTTGA MRNVVVLWLLMATWVAEAQISKDVVIRVPPVRYFIHVANDLTNQDMFVHCQSKDDDLRIQHLVHRGDEFRWNFKENFWKTTLFWCRLEKSDAHVSFNVFWPESKHHWLRDRCGSQGVCIWSAKDDGIYLRNLPAQNEEFVHKWIII Homology
BLAST of IVF0003975 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 9.0e-19 Identity = 49/125 (39.20%), Postives = 74/125 (59.20%), Query Frame = 0
BLAST of IVF0003975 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 4.4e-18 Identity = 50/131 (38.17%), Postives = 75/131 (57.25%), Query Frame = 0
BLAST of IVF0003975 vs. ExPASy Swiss-Prot
Match: Q40975 (Self-incompatibility protein S1 OS=Papaver rhoeas OX=33128 GN=S1 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 5.5e-08 Identity = 33/84 (39.29%), Postives = 50/84 (59.52%), Query Frame = 0
BLAST of IVF0003975 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.6e-07 Identity = 30/95 (31.58%), Postives = 47/95 (49.47%), Query Frame = 0
BLAST of IVF0003975 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.0e-06 Identity = 26/81 (32.10%), Postives = 43/81 (53.09%), Query Frame = 0
BLAST of IVF0003975 vs. ExPASy TrEMBL
Match: A0A5A7U887 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G001440 PE=3 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 5.7e-85 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of IVF0003975 vs. ExPASy TrEMBL
Match: A0A1S3CHP5 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500549 PE=3 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 1.2e-79 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
BLAST of IVF0003975 vs. ExPASy TrEMBL
Match: A0A5A7UAS6 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00440 PE=3 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 5.4e-51 Identity = 95/145 (65.52%), Postives = 114/145 (78.62%), Query Frame = 0
BLAST of IVF0003975 vs. ExPASy TrEMBL
Match: A0A5A7SNG3 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11658G00010 PE=3 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 1.2e-50 Identity = 91/142 (64.08%), Postives = 112/142 (78.87%), Query Frame = 0
BLAST of IVF0003975 vs. ExPASy TrEMBL
Match: A0A5D3DIG9 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00380 PE=3 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 1.2e-50 Identity = 95/144 (65.97%), Postives = 110/144 (76.39%), Query Frame = 0
BLAST of IVF0003975 vs. NCBI nr
Match: KAA0050597.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07843.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]) HSP 1 Score: 319 bits (817), Expect = 3.42e-110 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of IVF0003975 vs. NCBI nr
Match: XP_008462119.2 (PREDICTED: uncharacterized protein LOC103500549 [Cucumis melo]) HSP 1 Score: 301 bits (771), Expect = 2.36e-103 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
BLAST of IVF0003975 vs. NCBI nr
Match: KAE8646229.1 (hypothetical protein Csa_016318 [Cucumis sativus]) HSP 1 Score: 280 bits (715), Expect = 1.46e-92 Identity = 127/144 (88.19%), Postives = 135/144 (93.75%), Query Frame = 0
BLAST of IVF0003975 vs. NCBI nr
Match: XP_004139724.1 (S-protein homolog 1-like [Cucumis sativus]) HSP 1 Score: 263 bits (673), Expect = 2.24e-88 Identity = 118/133 (88.72%), Postives = 125/133 (93.98%), Query Frame = 0
BLAST of IVF0003975 vs. NCBI nr
Match: XP_038896423.1 (S-protein homolog 1-like [Benincasa hispida]) HSP 1 Score: 209 bits (531), Expect = 1.33e-66 Identity = 97/145 (66.90%), Postives = 114/145 (78.62%), Query Frame = 0
BLAST of IVF0003975 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 94.7 bits (234), Expect = 6.4e-20 Identity = 49/125 (39.20%), Postives = 74/125 (59.20%), Query Frame = 0
BLAST of IVF0003975 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 92.4 bits (228), Expect = 3.2e-19 Identity = 50/131 (38.17%), Postives = 75/131 (57.25%), Query Frame = 0
BLAST of IVF0003975 vs. TAIR 10
Match: AT5G04347.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 68.9 bits (167), Expect = 3.7e-12 Identity = 38/110 (34.55%), Postives = 58/110 (52.73%), Query Frame = 0
BLAST of IVF0003975 vs. TAIR 10
Match: AT1G28305.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 65.5 bits (158), Expect = 4.1e-11 Identity = 36/113 (31.86%), Postives = 56/113 (49.56%), Query Frame = 0
BLAST of IVF0003975 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 58.5 bits (140), Expect = 5.1e-09 Identity = 31/102 (30.39%), Postives = 52/102 (50.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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