IVF0003957 (gene) Melon (IVF77) v1

Overview


Name	IVF0003957
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	double-stranded RNA-binding protein 1-like
Location	chr04: 25088610 .. 25103453 (-)
RNA-Seq Expression	IVF0003957
Synteny	IVF0003957

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGAAAGAACTCGTTTGCACCATCTATCACCCTTACTTTCTTATATTTGCAATAAGTTCAAAAAAAAAAAAAAAAGAGCGTTTATATAGTTTTATTTTTAAAATTATACATATTTTTATCACTTTATTACATAAGCAATGTTGGATTTTGGGGCAACCAAGGGGAAGCAAGAAGTGAAGTCCTTCCTCTCCACACTCTCCATCTTCTTCTCAATTTCTAGGGTTCTTCATTTTCTCTCTCTCTCTCTACTGAAACCCCTTCCTTTCATTCAACATGTTCAAAACAAAGCTTCAAGAACTCTGTCATCGCAAATCTTACAAATTACCTGAATACTCAGTGGTTAAACAAGGCCAAGACCACGACCCACGTTTTGAAGCCACTGTCACCGTCGACGGCAAGCAATTCTGTTCATCCACTCCTTCTAAATCTTCCAAGCAAGCACAGAACGATGCTGCTAAGCTTGCTTTTGACTTCTTTTCTCTTCCTTCTTTACCTCAACCGTCCCAGCAGCTTTGCCCTCAACCAGTTTTGCCAGAATCCTCTTCTCCCCCGAAACTAATTCCTTCTATTCTCCCATTTTCTCCCCCCTCTCTAGATTTATCTTCTTTTCCTCAGCCGTCTTTGCCTTCGCAATTGGGTACGTGTTAACACTCTTTTTTCTTCCCACTTTCCATTTTCTTCCATCACTATTTTGTTGAGTGTATGTGTTAATAGCATTTCCATTTTCATCTCTATGGCAATAAGATTATAAAGAAATTGCAAGTTTTTGTCTTCTTTTGGGGGGAAGGGTGATCTAGGTATTGGTTATTTTTAGAATAAGAACGATTTTCTATATTAGGTAATGTTTGTGGTTCCCCATCAAAATGTTGCTTCGTATGATTGTGTTGTTAATAAGTTTAGCATTACAAAAAATTATTCCAATGGACTACGAGTGAAGAAGATATACCATGCTTACAAAATGGAGGAACCAATTTACAAATTACCTCATTAAAGAGCTAGGCTAGGCAAGTAATTCGAGTGATGTGAGACTCTAAATCTTGCTCTTTGCAGCGAAGCTACGGTAATGTCTCTCCAGCCTAATATACCGAAAGACAGCCTTGATTTTTCCATAGGGTCTTTTTCTCAAGGGATGCTTGATTGAGCGATAGGAAGAAGAGTCCATATATTATCATTCTTATTATTTTTCTGATAAGAGACAGAGAACCTTATATATTATTTGGATTTTCAATATTCCATGATCCAAAAGCCAACCATAAGAAATCCCAAAAAGATCTTGCTAAGGAACACGAGCTGGAAAGGTATCTGTGAGCTTCAGAATCCCTTTTGCATGAAATACAAACAATTAGGAGAGATATAAGCCTGGGGGATGTTTGTTGTATTGTATCTTGTTTTGGGATGTTTAAAAAATGGCTCCCTTATAAAAAACTACACTTTTTTGGGCGGATATTTTCCTTCCCGGATGGTGTGATATATTTCATCTTTGGCATGGATTCCAAGTCCTGCTAGGGGTTTTGATCAGGATTTGGATGTGAAAACACCATCCTTGTACAAATTCAAGACTGATGCGTCCTTATTTATCAGGCATAATAAATGAAAGGGCATTTGATTGCCTAGTCCATTCTTTAATTTCATCATCAGTAAGACTTCTTATTGGCCAAATGTTCCATGATCAAGATGGTCTCCCTTATGTTTTTTTTTTAAACGAAGACAAGAATATTTATTAATGTAAACTCAAAGTACAAGAGGATTACAGAGAAACCTAAAGGGGGGGGGGGGGTGTGAGCGGATCATAATATCCCAAAGAAAATCCAAAGACCATAAGAAGTCAAAGTACAACAATTACAGCGGTGCAAAACAACCAAAATAGTCAAAAATAAAACTGAAGAAAAAAACAATACAAGAAATGAACCAAAAACAGAAAAGATTGGTTTTCCAAAACCAGCAAACCGACATATTTAGGAATGTGGAAGTTGCAAGAGGATCAACAACAGATTAACCATAAAACTTGAAGGAAGACAACCCAATTTAAACATAGATCGTGAATGGAATAATCATTAAATTCTTGACTTAAAGAGCACTGGGTTGCTGCATTCCTTTTTGCAGTGTCCACAGCGTCTAACCAAGCCCCTGCCTTTTCATGAAAGATACACTGATTGCGCTCAAACCAAATTTCTGCCAGCAGTGCTTTAAACATGTTTTCCCAATTAAACGTGGTCTCTTTGACAGAATCGGCCCCTTCAATAGCTGGAAAACGTTTGAGCTTTATCTAAAAGAGAAGATGGAGAGAGGTGAACTGAAAGAGACTTAATTGAGAATATACCTTATGGATCGATTTTCCTGATTCTTATAACCTCCATTTCAGTCACCCTTTCTGTCTAACAAGGATTGAGAAGCAGTACCACCGTCAGTAGACCAAGTAAATCTGTTGTTTTGTAATGGAATCTCCATAGGAAAGGCCACCTCAATGAAGTTGTTAAATAACTTCATTCCTCTTGTGTTCCTGCCTGAAGGAAAGCGCTCATGGGCCTATCTAATGACAGTAAAGTCCTTCCTAAATACCAAGTCTCAGCTGAACATGCTTGAAGGATAATAGCCCCGACCACGTTTGTAACCCAGCAACTCTTTTTACAAATCGTGAAGCAACTGATTGAGAGAGAGAACCTCCCTTTAATGGTTTCCACTATCAAAATCCTGCTTCGGTCCCACATGGTAAGCATCCCCCTGAAAATTCTTTTGATTCCACAAAGACCCAGCCAATGTCCCTAGAGCTCCAAAGTATTTTTGTATAAGTATTATTAAATCTTTCCATTTTAGATTCCTGGATCTTTACCAAAATCGGATTAATCGCTTTTAGGAACTTCTTGAGAGCAATGCACTTGGATGGAACCTTTGAGCCCCCTGTGTTCCAGGAGACTACCTTCATTGGTGGTAGTAACTACATTGCAGTGATAGAACAACTTGCTCAGACCAGAATAATACCACAATCTTTGACTATGGGCACCAACTCCTTCGACAAATCTGAAGATTTTAGCGAGGAGGACCGAGGGGTGTCGTCTAGCGGGGCACAATCAGCTTCAAATAGAACTTTAAATCCATCCCTTCAATTTTCGCATAAGCCTTATGACCAGGACACCTCAAGCCCGTTGAATCTTCACTACTAACATCGAAGGGTGAGTCTATCTCCATATATGCCTGCTTCTTAGTGGTGACAATAGAATGGCAAGGGGAACCTCGTACTAATGTTACCTTTGTGTTAGGGTCCGTGAAATTCGAGTAATTGAGAAATTTTGGACTAGGAGAATTAGTTACTGACCTGTTGAAAGAATCAGGCTTGGACTTTGGAACCACACACCTCTAAGAGATTTGGGTTATCTTCAGAAAGGGAAGGCTTGAGTTCATGTTTCCGGTGGGGATCCAAAATAGGGGCTTTGGTCCCCCTTCTGTTAGTAGGGGTGTTTTGCCAGGCTGGTTTTTTTATGTGCCCTTGTATTCTTTTATTCTTTCTCAATAAAAGTTGTTTGGTTAAAGAAAAAAATGTTCCACGATCAAGAAACAATATTGCCTAAGGTCTAAAATGGACGCCTCATCCTTGAGGGTAAGAGGATATAAGGAGGGGAACTATGTATCCCATCGATGACCTAGATGACATAAATGGGCCTCATTTCATCATTTTATACCCAATCTGCCTATTAGCACTCTATTCATGCAAAATGACATTTAAATCTATAAATTTTTCATGAACTAGCTCAATTTTTACCAAAAAATATCACACATTTACTGTGGTATCAATTCTCAAATAGAACAGCTGATATTGAAAGGAAACATGGAGTAAAGGGTCTATCTCCTAGCAATTTATCCCCTCAAAAGTAAGTATTCTTCCCATCTCTTTCAACATAATGAACAAATTGGAAAAGAAAAGGAAGCTTAGTAAAAATCTCTTTTCATGTGTTTCTGGAAATGCATTTTAAATCCACCGAGAAGCCACTCAAAAGGGTCAGGGCTGTACTTGCTTATAATGACCTTGTGCCATAAGCTGTCTGTTCACGATGAAATTGCAATGACCATTTAGCCAAAATGACCTTGTTCCTGGCTCTTATGTTATCTCTGCCTAACCCTCCAAGGTTTAACAGCCTAGCCACCACCTCCCATTTCACAAGATGAGAACCTTTCCCTCATTAACCCCCTCCCTTAACATTCCCTTTCTCAACTTCTCAAAAACCTACCTGACTGCACTAGGGACTCTAAAAAGGGACATAGAAATAGATCAGGTTGTTGTTCAGGACTTGGTGAATTGTATTTTATTTTTTTGGATAAGAGGACTGAATGAAATGTAAACTTACCACTTTTTTTTAAAAAAGAAAAAACTCTTCCTGAAATGTTGACTTTTTTTCAATCTTACGAATGACACGGTCCCACAATGTGAGCTTTCTAGGATTATGACCGTGGGGAAGGCCTAAAATTGGAAGAAGAAGAGGCTCCAACCTCACACCCCACCCTAGTGAACTGGAAAGTAAATGTTAACAGAACCGCAACTTAGAAAAATATGAGGCAAGTTAGTGTAGATTGTAGAAGTAGAAGTGATTTAGGTTGGATTGAATTCCCGACATGGGAAGAACAAATGGATGCAAACTTAAATACAAGTTGGCTGAAGGCATGGAAAACAAATGGATGTTGATTGAAATGATTTCTATTCCATAAAACAACTTACATGTTAAGGGAGAATTCTGGAGGTTTCTGATAGAACACAGTGTAGATGTTCTTTATTCAACTTGGTAAAAGATACTTAAGTACAAAGACAGATTGATAGATTATCAATCCTGGAAATAAAACACAAAAATACAACAAAACAATAAGAACATACCACTCTGTTCTCCTCCTCTCATGGAAAAATAGCCCTCTCATAAAGTGAAAACTTCTCTCCACTCACAGACTCCTCTCCTTCCCTCCTAAATAACTGAAAGACCGTAAAAAATAACAGCACTACCCTTATAACTACCCAATAACTTCCAATTTCTCTTTCTTCTTTCTCCTACTATATTGCAATATTATGGGAGGTCTAACAGTTCCCTCCGTTAAAATGACCAACATATACCTTATGGTTGGGTGGCCGGTGAACCGGGTGGGCTTAGAGATTTGTAACCTAAAGATTCACAATAGAGCTTTATTGGCCAAGTGGCTGTAGTGCTTTGCCCTTGAGCTTGAATCCTTATGGCGTTAGATGATTGTGAACAAGCATGATCTCCATCCTTTTGATTGGGTGGAGGGGTTAAAGGCACACATTGAAATTGGAAAGACATATCCTTTGAGTTTCCAACTTTCTTTCGATTCACTCGTATTGTTGGGTGGGGGGACAACAAGGAAACATATTTCTGGGAGCACCTGTGGGTGGGGGACAATACTCTTTGTTCTTTGTATCTGCATCTTTTTCTCTTGTCCTCTTTTAAAAACCGTTCGGTTTCGGATCGTTTGGTTTGGTCTAAAAATTTAGTGTCCTCTTTCGGGTTCCATCGTAATTTGTCTAATAGGGAAACCGAAAAGGTTGCTTCTCTTCTTTCTTTGCTTGAGAGCTACAGTTTCAGGGAGGGGAGGAGGGATTTTCGTGTTTGGAGTTCTAACCCAAGTTAAGGTTTCTTGTGTAAATCCTTATTTAGTTTGTTGTTGGATCCCTCTCCCATTAGGAAGTATGTTTTTGATGTGGTCTAGAGGATTAAGGTTCCTAAGAAAGTTAGATTCTTTATTTGGAAAGTCTTGCTTGGTCGTGTGAACATTGTTGATAGGCTTGTTAGGAGAAGAACCTCCCTTGTTGGGCCTTTTTGTTGTACTATTTGTCGGAAGGTAAAAGAAGACCTCAATCATCTCTTTTGGGATTGGCCGTATGTGTGGTGCTCTTTTTTGTAGGATTTTGATGTAATTATGCTGGCCAAAAGGAGCATTTGTGTGACGATCGAGGAGTTCCTCCTCCATCTGCCTTTTAGAGAGAAATGTCAATTTTTGTAGCTTGCTGGGGTGTATGCTATGCTTTGGGATAATTGGGGGGAGAAGAGTGATCGGGTATTTAGAGGTAGGGAAAGGGACTCTTGTGAGGTTTGGTCCTTAGCTAGATTTCATGTGTTCCTTTGGGTTTTGATTTTGAAGATCTTTTGTAACTATTCTATTGGTAACATTTTACTTAGTTGGAACCCCTTCTTTTAGTTGGGGTGTTTTGGTGGTCTTTTTTTTTTGTATGCTCTTATATTCTTTTTTTTTTCCTCAATAAAAGTTGTTGCTTTTATTTATAAAAAAAAAAAAAAAGGAAGAAAAAGAAGAAAAGAACCCTTAAAATCCTTAGATCTAAAAATGTGCTCTAGTTAATTTTCCGCCTTAGATCTAAAGACTCACTGTAGCAGTAGGTATATTATTAGGGAGATAGAAGTGCAGTGAGCAAGTGTGCAAATGGTTTGGCCATGGAGAGATAGTGGGCACATGCTTTAGATTACTGAGGATTGATCATGTCTAGAAATAGTGGGATGAAAGAGAACGCATCACATGCATCAAAGAGAGACTGAATCTTGGGTTGGAGCATGTTCATTGCAAGATGATGGGATAAACTTCCACAAGATGTTTTCAATAAAATGGAGCCTAGTGTAACTGTTTTCTGAAAATCATTTCTGGATTCGTTCCCGCCAAATACTGACCTGTTATTGTTATTACATCTGCATTTATAGAAAAATAAAATTAAACATGATTCCATCAACTCACTCAACGTACAGTTTTCAATTCCTCTGTTATAATCTTAATGACTTTGACATGGTTGCACTAATTCCTTAAAATATTTGGCCTTGCTGTAATTGTTTGTTATCCTGGACAACACAAAGTCAAGAAGGTAAGTTAAAGTAGGAACTGTAGGATTTAGATATTAAATTGATTTTTCTAATGTGCAAGAATACATAAAGTTGTCACTTTTCTTTTCTTGCAGGCAATTTTGGTGCGATAGCTAACCTGGACAACAAAGTTACTTCCCCACCGAGACCAGAAGTAAAGCTTGAGGTGGCAAACAAATCTTCTGAACTTAAGGAATCTAGTAAAGGTTTTAAAAACAGCATTCAATGCTTACAAAGCTTTCCAGTACCTCTTCACATTTTTAAAAAAATAATTATTGTTTGTATTTGAGCCAGCAAATTATTTTCTAATCATGCACACTTATGGATGCTCATAGTTATATTCAATAACGTGGTCTGATTCTTCCTGTAGATTCTCCCATCATGAGTAATATGGACGTCAAATTTGCAGGACAGTCAGTTGAACCAAAAATTCTGAACACTGACAAGTCTCCCGTGGTTGAAGACTTCGACAAAGAATGCCTTAAATTGACTGGTTAGAAAGGATTACCACTAAATTACTCTACATTAATGAAGATATACTGCTTCAATATTATGGTAACGTTGTGGCACAGCTTGGTTCATTTTGACCAGTTATGCTAAGCACGTGGTATGATTTTACTAATCTCCTAACCAGTCGAGGTGGTTGAACACTTTAAGGGGGTGTTTGGCCCTTAAAGGGAGTTCCTCCTCGATCCGTCTTTTAGGGAGAAAGATTGGTTTCTTTGGCTTGCTGGTCTGTGCATGGTTTTGTGGGATGTGTAGAACAGGAGGGTGTTTAGGGGTGTGGAGAGGGATCCTTTGGAGTTATGGTCCCTTGTTTGCTTTCTTGTTTTCCTTTGGGCTTCGATTTCAAAGACTTTTGGTTATTATTCTCTACAGGAGGGATTTGTTGGATACCCAGATTAGTGTAGGATTAGGGGTATAAGGGTAATTAGATAGTTAGGCAGTTACATATAGTAGTGGTTATAAATAAGAAGTTGGAGAGGGAAGAAGGGGGATTATTAAGTAGTTAGGTCTTGAGTAGTATTGTCAAGAAAGGGGGGTTCCAAGTACCATAAACTTGGATCATATTGTAGTTCTTTGATTCTCAATATATTTCAATTTTAATTCTTGTTAGGGACGAGTGTTCCATCTTTTTGGTATCCAAGCGTAATTACCTGGGAAACGATTAGCCATGGCACATAAATGGTTCGAGGAGAAACTCGAAGAATTCGATCAGGAAGTTTTTGGAATAAGAGTGGAGTTGCATAAATTGCCAATGATCGAAGAAAACTTGTCATTGATGGCGAAGAGCATTGAACGATTGGGCATCCAAGTGGCGAAACAATAACAGCAACAACAGTTGCTATTGAAATACATCGAAGGAATGGTGAAGGAGAAATCGACGATGACTAAAGGGATGGAAGGTTCGTTTAAGTAACGGACATTTGATTGGGAGTATCGTTGAAGGAGGAAATACGATGATGAAAGAAATCAAGTTTGAAGTGAAGATTTAGTAAATCTAAAGGAGAAGAAAATTCGAACGATTGGAGCAAATTCAAGAAGGTGCAGATACCGGTTTTCGGTGGAAACAATCCAAACTCTTGGTTGTTCAGAGCTGACCGTTAGTTCGAAATTCATAAGTTGGAGAAGTTGACGGTGGCCGTAATTAGCTTCGACGGGGCGACATCGGACTAGTACAGATCGTACGAAGAGCATGAACCTTTCCAGAATTGGGTAGATTTGAAACAAAGATTATTAATCCGATTCCGATTGGTGAGGGAGGGATCCATTTGTGGAAGATTCTTGGCCATCAAGCAAGAGATGACTGTAGAGGAATATCGTAATTTGTTTGATAAGTTGGTGGCACTATTGCCACACCTGCCGAAAGAAGTGTTGGAAGTAACATTCATGAATGGGCTGAGCCCATAGATCAAGGTGGAGGTGGAGTGTTGGGAGCCAATTGGGCTAGCTCAAATGATGAAATTGGCCCAGCGTGTTGAAAACAGAGGGATCACGAGAAGATAAGGCCCAAACTACCATACCTATTGTTAAAACTAACTTTCCATTGAATGTGAATGAATCAAAAACAAGAGGAAATTTTCCGATGAGAACCATAACCTTGCAAGGTGTGGCCGCAAGAGAGAACCAGCGCGAAGGACTGTCGAAAAGACTAACTGATGCAGAATTCTAAGCTCGGAGGGAGAAAGGTCTTTGTTTTCATGTGAAGAAAAGTATCACGCCGGTTATCCTTGTAAGGTGAAGGAGCAGAAGGAGTTGAGAGTGCTGGTTGTTTGAGAAAACGGAGTGGAAATAGAGATAATTGAGGAAGACTATCACGAGGAAGAAGTTGAGATGAAAACAATGGAGGTGGAGAAAGAAGAAAAACCAAACATTGAGTTGTGAATAAACTCAGTGGTTGGCTTGACCAATCCGGGCACAATGAAGGTAAAAGGGAAAATCAAAGAAGAGGAGGTTATTTTGTGGGGAGTTCCCCGTTCATCCTTGAGAGATAGGAGAGGCAGAGAGGGAAATTTCTTCATTGTTCTTAGTTCCGAATTGATATCTTATTAGTTCTACTTTGTAATCGGATTCCCCTTTTTTGTGGTTTTTTTTTTTTTGTGTTTTCCAATGTATTCTTTCATTGTTTTAGATGAAAGTTGTTATTTAAATAAAGAGAAGGGGTGTTTGGTTCTTGGTGAGATTTCTTGTTTCGCTTTGTGCTTCGGTTTCAAAGTTTTTATTTATTTATTGTAAATATTCCTTAAGCAACATCATAGTGGGGATTTTTTTTGAAGGGGGTGCTTTTGTGGGCTTTTTTTTTTTTTTTTTATTTAATTCTTTTTCCTGTATGCCTTTGTTTTCTTTGATGTTTCTTTTCTCTATGAAAGTTGTTGATTATTAAAAAAAGAAAAGGAGTTTTTGGCCCATGAGCAATTAACAAGATAAATACACATTCTCTATGAGAATTGAATTCCCTTCTTGCCTCTTAAGAAAATTTCAATATGCTCAAATCTTTTGTATGGGATTGACTATGAATAAGGTCATTGGGGATTGAATAATTAGTGCATCAAAGGGGTTAGGTGATCATCAGTTGGTTATAGTCAATTTTGGGCTAAAACAAATGCCAACCGGCTACTACTGACATATAAGATTTGATCAGTCGGTTTTAGATGATTTTTGGGAGGTTGTTGATGGCAATCGACCGTCCATATGATCGGCTGGTAAGTTTTGGCTGGTTTTGTATGTCTGGCAAACTAAACAAAAAATGCAATAAAGATGAGAAAAAACAAAATCAAAGAGAAGAGAGAAGCAAAGGAAAAGAAGAAAATAACAGAAGGTAATAACGTAAAAGAAAAAGGGGAAAGAGATTTTAGAAGGAATAAATCAAGAAAGAAAACGAATAAAAATCTTATCCAAAGGATAGAAGAGAAATAGAGAGAGCCCATATTGGCGGCAGTTTTAACGTCGACGGAGGCTGGTGGGAGGAGGGAAGAGAAAAGAAAGAAGGGGATGAAGAAGAAGGTGTGATGAGAAGATAGGCTAGAAGGAAATAGGAGGGAAAATTAGGAGAATCGGATTTTGGGAAATGGCAGGGAAAAGAAGAGAATCAAATTTTGGGATATGGGAGTGGGAGGGAGATTGCCATGTGTGAGAGAAGAGAGAGGAAGAAAACAAATTTTTCTTCTAATAACCGATCTTAAAGAAGTGGCTATAAGTTATTTTCATACACTTCTGGAAGAGGTCAATTTAAGTGAAGAGGAAAGTTGGGGTCTTTGCATTTTTTTCTTCCTGAAACGGTTTTGATTGTGTGAATATAGGAGCTTTTTTTTGGTTAAAGAGCTTGATTCAGGTAGACACCTTAGACATATCTGTATTTATTTATTTTTATTTTATTAATTTGGATTGGAGAATTTTCGAGTAAATGGGTTTCTCCTAGGTGTCTCAATCATCCACAGCCTTTAGGATAGTTCCTTTTCGTTTTTTCTAGCATTACCTCCTTTCTTATTTAAAGAAAAAAGAACGAAAAAAAAAAAAAGACTAAGCCGTAGTTGACTTAGAGAATGTAGTGCCTACTTGGTCGAAGAATGGCACTTGGGAATAGACTGACTTATGATTGGACAAGATTCAAACAATTTTATTATGATTTTTTTTTATTTCGATCATTTCAAGAGAGAAAGCTACATACGAGGTTATTGGCTTCATGTGAAGGACGTATGTGAGTGTTTGGTTGCATCAAAATGCTAGCTGCATACCGAATCTATTCTATGTATAATAGTAGGCGAAGAAAGGAACTTCATAAATGAACTTAAGCTAAACATAGCTGTTGAGGTGAAGATGTTATTGATGGATATGACTTATGAGTGAGGAAAAGGAACTTAAAGTTATTACCTAGTATGAGAAAAAGGCTGGGTATCAACTGTAGTAGTTATAATCCAAAAGTTGGGAAGAATGCAGATGCGACAATACCTAAGCGGCTAAGCCTCCAAACTTTCAATTCAACACAAAAAGATAGTATCTTGGTGTACAATTTTTGAGCACCTTTTGTATACATTTCTCACTTGGTGCAAATTCACCTTTTTTTTTCTTTTTCTTTTTTGGTGTGGTTAAAATCTCAAATCTCTTATATTGTCTTATAATAGTTTGATGTAATATCTCACTGCAGTTGTTGCCCTTTTGTAATTTCACACATAGTGAAATTCTAATTGAATGTCTCTTAAAAAATGGGTAGTCGTACTGCAGAAGTGATTAGGTAGGCCTGCAAATAGGAAAAGAACATGGTTTATGCTTCTTTACAGTGAGAATTCATTGATGTGAGAACAAGGACTCGCCAATATTGGTTGTATTTTTTCTCTGGGGGATAAAAGTACCATTTTTATTCAAATCAATAAGATTGCAAGAGGAATCCAAATACGAAACAGTGCCTTACCAACAAGAACAGAAGCAACTAATAACATATATAAGTACTGCAATCATCTCCCGAGTTTTTCTTCAATTCATAATCCCAATATCTCTATCTTATCATAATCTTGTTTGTAGTGTGTGCACATGTGTTTGGTGTTTTGAGAAAAGGCTTATCTTTTTAGTTCTTTCTTGTTATTTTTTCCCATGTATCTCACAGTTTTCAGTCCGAATTTGAAGTTCATACTGCCACTCCAGTTATGTATGATTACTTATCAGAACTTGGCTACTTCTTTTGATGCTCATAGGTATGCAACATTTGTACAAGAATAAGCTGCAAAATTTCTCCCAGAAGAGAAGCCTCACTTTACCTATGTACACATGTGAGCGTGATGGCCCACCCCATGCTAGTCGCTTCAGATGTAAAGTGGAAATAGATGGAAAGACTTATGGAAGTCCAGAATTTCATGGCACATTGAAAGATGCTGAGAATGCAGTTGCAAAAGTTGCTTTAATGTGTTTATGTCAAGATGGAGCTCAAGAGGCTAGTATTCTAATTTAACCTTCAATGAAAAAGAATAAATAATTGCACTGCACATATATGAATGAAACAACCATCTCTCACGTGTTACTTCTAAATTTCTGGATGTTTATTTCTTTTATAAATGATAGGATTCTGATTCTGGCCTTTACAAAAATCTCTTACAAGAGATGGCCCAAAAAGGAGGTCTAGGTTTACCAGCTTATTCAACATCGCAATCCGGTGAAGTTCATGTACCGGTCTTTGTTTCTACAGTGAAAGTAGGAGAAGAAAATTTCGAAGGGAAACCATCAAGAACTAAGAAACAAGCTGAGATGAGTGCTGCAAAAGTTGCTTTTTTTACCATAAAGGAGGGTAAGTGTTATTGGCAAGTATATCTATTGAGTACCTTTTTGTCGGTTTCAGTTCTTAGCAAAGCTTTTAATCACCTTAAGCATGCACATTTTTTTCTCTCTAAATTCTATGATTGAGGTATGCAATGTGCACAAGTTTATGGTCCGATGAGACATGGGAGTCAATGGACTAGAGCATAATACTTATCCTAAATGTTTAAACTATTAATCACCAATTATGGATGGCTTGAACTTGCCTTGAGTTTCTTTGCTTAGCTTTATATCATTTACTAGGGGTGAGGATGATAGACTGAAAAACCGAGCCGACTAACCAAATTGAAGTCGGTCGGGGTTGGTTTCGGAAAGTTTCAAATCAAGAATTTTCAGAAAGCATTTTTAAGTATTAAACCGACCGACACAAACCGACCCTTACTCATCAATGTTGAGGTCGGTTTGACACTTTACTAAATCGACTATGGTCGGTTCGAGGTCGGTTTTGTTAAAAAACCGACTCCAACCGGCAGATGATCACCCCTAGCATTTACTATATTTTGTGCAATTTGCAATCTAGGCAAGATTGCATCTTCTAGAGAACGAGCTTCTCAAGTCATTTCGTCTAGCTTGCAATCAAATGTCAGCACTGGCCAGGAACTGCAAGTGATCTTCAGTAAGGGTGTAAGCGGTTTGGTTTGGTCCGAGTTTCATATAAAACCGGAATCGAACCGCTCATTTGATGAAAGAACAAGTCTAAACCAGTACTGAACCTGTGTCATTGATGAACCGAGTCGTCCGAACCGTTTGGGCTGCCAGTTTGGTCAGCTCGGATCTCGGTTCATCGAATACATACATGTGCACGTATGCTTCATCACAAGTGCCTTTTTATTAAGAAATAAAATAAAATTTTGCACGTTCACTAGATTCGAACCACATCCTGGTGTTTCTAGGTGTGCTCCCCCATCAACCTAACCAGTAACCTTTTGGTTACATTACTCACACTTGATATATTTAGTTTATCGGCCGGTTTGGTTATGCAGTTTACTTTTTTTGGCAAACCCAAAATTGACTGTTATTTTTGGTTTTTTAGTTCTCCAACCCGAAATCTTCAAACCAAGCCATTTCAAATCGAACCAATAAAGCGGTTTTGGTCGGTTTGAGTGGTTTCACAGTTTTCTCGGTTTTTCCTTGCATCCCTAGTCACAGTCCTGGAATTTCAGATCTAAACATGGCAATTGAGAAACAACACAATGATGGAAGTGGTTTTGCCCCCTTAGACTATTATATTAAGTACTCTGTTGCTTGGTTATTACGTATGTTAACGGAAAATTAGGGTTTACGGATTATTATTATTTTTCATTATAATTTTTCTTTTTAGCATTTTATATTTATGTATTTTTCTTTAGTGGTATTTTTGAGGCCTATTTATTCCTCTACGTAAAAGGTCGTTATGTAGTCTTTATTATTCTGATTTTTTCTATATATTATATAAAATTATCAATAAGTTCCCAATATTTCTCGTCTATTGAACATTAGATGAACTGATGGCATGCAATCAAAATTTTCAAATTCCTTAACTCCAATAAACCCTCACCCAAATATGATATAGAAAACTTATTCAAACCTTGAAACATGTTAGATACATTTCAACCGTTAAGTTTCTGACTATTGTCATCTTGTATTATAAATTTATTGTTCTACATTAGTCAGTCTTTTATTCCATGTTTAGGATCTCAAAGCATTTCAACAAGAAAGAGAGCTCCATCGTGTGACCTTGCTATTGAAGTTCCCCGTGCTATTGCGACATCATCCCATAATGTTGCTCAACCAGGTGAGAGCAATGATTACGTCTCAAGGATAGTCTCAAAGCTAGAAGCTGGAAAAAGCTCATCTTCCAAAAGGATATTTGTTTGCCCTCGTCAACCGAATATGACAATTCCGAAGGAAAGTTCGGTATTACCAATAAGTGATGACCAATGGGTTGCATTCTCGGTCGAAACTGGAAGTAGTCAATAACTTTGCCATGAATAATGGACTTTTGAATTGTAACTTAACCTTGCTCAGGACTGAAGTATGTCAACTCCTAATGCTTAGGTAGATACATATGTATCTATTAACTCAGAATTGTGGACAATACTTGGAACAACATCGTTGATGTTTGCTTGCTTTTGTGGTTTAGAATTATTGGTAGGCTTAGTTTTTACCTGCAACTTGATCTTCATTGTAAAAAGGCG

mRNA sequence

GAAAGAAAGAACTCGTTTGCACCATCTATCACCCTTACTTTCTTATATTTGCAATAAGTTCAAAAAAAAAAAAAAAAGAGCGTTTATATAGTTTTATTTTTAAAATTATACATATTTTTATCACTTTATTACATAAGCAATGTTGGATTTTGGGGCAACCAAGGGGAAGCAAGAAGTGAAGTCCTTCCTCTCCACACTCTCCATCTTCTTCTCAATTTCTAGGGTTCTTCATTTTCTCTCTCTCTCTCTACTGAAACCCCTTCCTTTCATTCAACATGTTCAAAACAAAGCTTCAAGAACTCTGTCATCGCAAATCTTACAAATTACCTGAATACTCAGTGGTTAAACAAGGCCAAGACCACGACCCACGTTTTGAAGCCACTGTCACCGTCGACGGCAAGCAATTCTGTTCATCCACTCCTTCTAAATCTTCCAAGCAAGCACAGAACGATGCTGCTAAGCTTGCTTTTGACTTCTTTTCTCTTCCTTCTTTACCTCAACCGTCCCAGCAGCTTTGCCCTCAACCAGTTTTGCCAGAATCCTCTTCTCCCCCGAAACTAATTCCTTCTATTCTCCCATTTTCTCCCCCCTCTCTAGATTTATCTTCTTTTCCTCAGCCGTCTTTGCCTTCGCAATTGGGCAATTTTGGTGCGATAGCTAACCTGGACAACAAAGTTACTTCCCCACCGAGACCAGAAGTAAAGCTTGAGGTGGCAAACAAATCTTCTGAACTTAAGGAATCTAGTAAAGATTCTCCCATCATGAGTAATATGGACGTCAAATTTGCAGGACAGTCAGTTGAACCAAAAATTCTGAACACTGACAAGTCTCCCGTGGTTGAAGACTTCGACAAAGAATGCCTTAAATTGACTGGTATGCAACATTTGTACAAGAATAAGCTGCAAAATTTCTCCCAGAAGAGAAGCCTCACTTTACCTATGTACACATGTGAGCGTGATGGCCCACCCCATGCTAGTCGCTTCAGATGTAAAGTGGAAATAGATGGAAAGACTTATGGAAGTCCAGAATTTCATGGCACATTGAAAGATGCTGAGAATGCAGTTGCAAAAGTTGCTTTAATGTGTTTATGTCAAGATGGAGCTCAAGAGGATTCTGATTCTGGCCTTTACAAAAATCTCTTACAAGAGATGGCCCAAAAAGGAGGTCTAGGTTTACCAGCTTATTCAACATCGCAATCCGGTGAAGTTCATGTACCGGTCTTTGTTTCTACAGTGAAAGTAGGAGAAGAAAATTTCGAAGGGAAACCATCAAGAACTAAGAAACAAGCTGAGATGAGTGCTGCAAAAGTTGCTTTTTTTACCATAAAGGAGGGATCTCAAAGCATTTCAACAAGAAAGAGAGCTCCATCGTGTGACCTTGCTATTGAAGTTCCCCGTGCTATTGCGACATCATCCCATAATGTTGCTCAACCAGGTGAGAGCAATGATTACGTCTCAAGGATAGTCTCAAAGCTAGAAGCTGGAAAAAGCTCATCTTCCAAAAGGATATTTGTTTGCCCTCGTCAACCGAATATGACAATTCCGAAGGAAAGTTCGGTATTACCAATAAGTGATGACCAATGGGTTGCATTCTCGGTCGAAACTGGAAGTAGTCAATAACTTTGCCATGAATAATGGACTTTTGAATTGTAACTTAACCTTGCTCAGGACTGAAGTATGTCAACTCCTAATGCTTAGGTAGATACATATGTATCTATTAACTCAGAATTGTGGACAATACTTGGAACAACATCGTTGATGTTTGCTTGCTTTTGTGGTTTAGAATTATTGGTAGGCTTAGTTTTTACCTGCAACTTGATCTTCATTGTAAAAAGGCG

Coding sequence (CDS)

ATGTTCAAAACAAAGCTTCAAGAACTCTGTCATCGCAAATCTTACAAATTACCTGAATACTCAGTGGTTAAACAAGGCCAAGACCACGACCCACGTTTTGAAGCCACTGTCACCGTCGACGGCAAGCAATTCTGTTCATCCACTCCTTCTAAATCTTCCAAGCAAGCACAGAACGATGCTGCTAAGCTTGCTTTTGACTTCTTTTCTCTTCCTTCTTTACCTCAACCGTCCCAGCAGCTTTGCCCTCAACCAGTTTTGCCAGAATCCTCTTCTCCCCCGAAACTAATTCCTTCTATTCTCCCATTTTCTCCCCCCTCTCTAGATTTATCTTCTTTTCCTCAGCCGTCTTTGCCTTCGCAATTGGGCAATTTTGGTGCGATAGCTAACCTGGACAACAAAGTTACTTCCCCACCGAGACCAGAAGTAAAGCTTGAGGTGGCAAACAAATCTTCTGAACTTAAGGAATCTAGTAAAGATTCTCCCATCATGAGTAATATGGACGTCAAATTTGCAGGACAGTCAGTTGAACCAAAAATTCTGAACACTGACAAGTCTCCCGTGGTTGAAGACTTCGACAAAGAATGCCTTAAATTGACTGGTATGCAACATTTGTACAAGAATAAGCTGCAAAATTTCTCCCAGAAGAGAAGCCTCACTTTACCTATGTACACATGTGAGCGTGATGGCCCACCCCATGCTAGTCGCTTCAGATGTAAAGTGGAAATAGATGGAAAGACTTATGGAAGTCCAGAATTTCATGGCACATTGAAAGATGCTGAGAATGCAGTTGCAAAAGTTGCTTTAATGTGTTTATGTCAAGATGGAGCTCAAGAGGATTCTGATTCTGGCCTTTACAAAAATCTCTTACAAGAGATGGCCCAAAAAGGAGGTCTAGGTTTACCAGCTTATTCAACATCGCAATCCGGTGAAGTTCATGTACCGGTCTTTGTTTCTACAGTGAAAGTAGGAGAAGAAAATTTCGAAGGGAAACCATCAAGAACTAAGAAACAAGCTGAGATGAGTGCTGCAAAAGTTGCTTTTTTTACCATAAAGGAGGGATCTCAAAGCATTTCAACAAGAAAGAGAGCTCCATCGTGTGACCTTGCTATTGAAGTTCCCCGTGCTATTGCGACATCATCCCATAATGTTGCTCAACCAGGTGAGAGCAATGATTACGTCTCAAGGATAGTCTCAAAGCTAGAAGCTGGAAAAAGCTCATCTTCCAAAAGGATATTTGTTTGCCCTCGTCAACCGAATATGACAATTCCGAAGGAAAGTTCGGTATTACCAATAAGTGATGACCAATGGGTTGCATTCTCGGTCGAAACTGGAAGTAGTCAATAA

Protein sequence

MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSSTPSKSSKQAQNDAAKLAFDFFSLPSLPQPSQQLCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSLPSQLGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSKDSPIMSNMDVKFAGQSVEPKILNTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKVEIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTRKRAPSCDLAIEVPRAIATSSHNVAQPGESNDYVSRIVSKLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSVETGSSQ

Homology

[Close]

BLAST of IVF0003957 vs. ExPASy Swiss-Prot
Match: Q5N8Z0 (Double-stranded RNA-binding protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB1 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.7e-36
Identity = 134/457 (29.32%), Postives = 193/457 (42.23%), Query Frame = 0


Query: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQF-CSSTPSKSSKQAQND 60
           M+K++LQELC ++ +  PEY+    G  H P F ATV+V+G +F      ++S+K+A N 
Sbjct: 1   MYKSRLQELCQQRRWAPPEYTHRCAGPAHAPLFGATVSVNGVEFRTPEDAARSAKEAHNI 60

Query: 61  AAKLAFDFFSLPSLPQPSQQLCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSLPS 120
           AAK AFD  S  SLP P                        P  PPS + SS        
Sbjct: 61  AAKAAFDHLS--SLPLP------------------------PPPPPSENQSS-------- 120

Query: 121 QLGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSKDSPIMSNMDVKFAGQSVEPKI 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LNTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCK 240
                                    YK++LQ ++QK+   LP Y   R+GP HASRF+  
Sbjct: 181 -------------------------YKSQLQIYAQKKGKLLPSYQTIREGPGHASRFKSV 240

Query: 241 VEIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDS---DSGLYKNLLQEMAQKG 300
           V +DGK + SPE+  T+K+AE+A AK+ALM L Q+ +  +        YKNLLQE+AQK 
Sbjct: 241 VTVDGKAFESPEYFHTVKEAESAAAKLALMSLPQEASSSEQVPVQPLSYKNLLQELAQKH 300

Query: 301 GLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAF--FTIKEGS 360
           G  LP YST+  G V VP+F STV   + +F+G+P+ TKKQAEM+AA+VAF  F  +  +
Sbjct: 301 GFSLPVYSTTSDGSVQVPMFKSTVVFQDGSFQGEPANTKKQAEMNAARVAFQHFEDRRKN 338

Query: 361 QSISTRKRAPS---------------CDLAIEVPRAIATSSHNVAQPGESNDYVSRIVSK 420
              ST  R P                 +    VP A   +SH+     + + +     + 
Sbjct: 361 ALSSTVLRGPHLGQGTVHISAGQVKIAEPVFSVPLASTATSHSATGATDRDYHSLGSTNP 338

Query: 421 LEAGKSSSSKRIFVCP---RQPNMTIPKESSVLPISD 434
           L   KS++   + + P   +      P+  +VL + D
Sbjct: 421 LPIAKSTNCADVHIQPCEFKDEKPAFPEPKTVLEVMD 338

[Close]

BLAST of IVF0003957 vs. ExPASy Swiss-Prot
Match: Q8H1D4 (Double-stranded RNA-binding protein 4 OS=Arabidopsis thaliana OX=3702 GN=DBR4 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.7e-34
Identity = 81/165 (49.09%), Postives = 107/165 (64.85%), Query Frame = 0


Query: 201 MQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKVEIDGKTYGSPEFHGTLKDAE 260
           M H+YK +LQ ++ + +L LP+Y  ER+GPPHA RFRC V   G+T+ S EF  TLK AE
Sbjct: 1   MDHVYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAE 60

Query: 261 NAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTV 320
           +A AK+A+  L    + E  D   YKNLLQE+AQK    LP Y+T+ SG  H P F STV
Sbjct: 61  HAAAKIAVASLTPQ-SPEGIDVA-YKNLLQEIAQKESSLLPFYATATSGPSHAPTFTSTV 120

Query: 321 KVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTRKRAPS 366
           +   + F G+ ++TKK AEMSAAKVAF +IK G+ + +     PS
Sbjct: 121 EFAGKVFSGEEAKTKKLAEMSAAKVAFMSIKNGNSNQTGSPTLPS 163

[Close]

BLAST of IVF0003957 vs. ExPASy Swiss-Prot
Match: Q9SKN2 (Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=DRB2 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.7e-31
Identity = 88/265 (33.21%), Postives = 142/265 (53.58%), Query Frame = 0


Query: 204 LYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKVEIDGKTYGSPEFHGTLKDAENAV 263
           +YKN+LQ  +Q+    LP YTC R+GP HA RF+  V  +G+ + SP++  TL+ AE++ 
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 264 AKVALMCLCQDGAQED------SDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFV 323
           A+VAL  L   G           ++G+YKNLLQE+AQ+ G  LP Y+T +SG  H PVF 
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 324 STVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTRKRAPSCDLAIE---VPR 383
            TV++    F G P++ KKQAE +AA  A+ ++K+ ++  S+    P     +E   + R
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 384 AIAT----------SSHNVAQPGESNDYVSRIVSKLEAGKSSSSKRI--FVCPRQPNMTI 443
           A+            SS +   P     ++  +         +++ RI  F+CP+QP+ + 
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQPSRS- 240

Query: 444 PKESSVLPISDDQWVAFSVETGSSQ 448
            + S       D+ +A ++E+ S Q
Sbjct: 241 SRSSLAATSGIDRIMAAALESRSYQ 264

[Close]

BLAST of IVF0003957 vs. ExPASy Swiss-Prot
Match: Q9LJF5 (Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DRB3 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 8.2e-31
Identity = 65/155 (41.94%), Postives = 101/155 (65.16%), Query Frame = 0


Query: 204 LYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKVEIDGKTYGSPEFHGTLKDAENAV 263
           +YKN+LQ  +Q+   +LP YTC R+GP HA RF+  V  +G+ + SP +  TL+ AE++ 
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 264 AKVALMCLCQDGAQED------SDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFV 323
           A+VAL  L   G  +        ++G+YKNLLQE A + GL LP Y++ +SG  H+P F 
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 324 STVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKE 353
            TV++   +F G+ ++TKKQAE +AA  A+F++++
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRK 155

[Close]

BLAST of IVF0003957 vs. ExPASy Swiss-Prot
Match: Q9AV50 (Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB6 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 8.2e-31
Identity = 69/155 (44.52%), Postives = 102/155 (65.81%), Query Frame = 0


Query: 204 LYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKVEIDGKTYGSPEFHGTLKDAENAV 263
           +YKN+LQ  +Q+    LP YTC R+GP HA RF+  V  +G+ + SP F  TL+ AE+A 
Sbjct: 1   MYKNQLQELAQRSCFNLPAYTCLREGPDHAPRFKAAVNFNGEQFESPGFFTTLRQAEHAA 60

Query: 264 AKVALMCLCQDG------AQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFV 323
           A+VAL  L + G      A+   ++G+YKNLLQE+AQ+ G  LP+Y+T +SG  H+PVF 
Sbjct: 61  AEVALAALARRGPSYSLAARILDETGVYKNLLQEVAQRVGAPLPSYTTERSGLGHLPVFT 120

Query: 324 STVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKE 353
            TV++    F G P++ KKQAE +AA  A+ ++++
Sbjct: 121 CTVELAGITFTGDPAKNKKQAEKNAASAAWSSLRQ 155

[Close]

BLAST of IVF0003957 vs. ExPASy TrEMBL
Match: A0A1S3CMT3 (double-stranded RNA-binding protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502699 PE=4 SV=1)

HSP 1 Score: 877.5 bits (2266), Expect = 2.4e-251
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 0


Query: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSSTPSKSSKQAQNDA 60
           MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSSTPSKSSKQAQNDA
Sbjct: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSSTPSKSSKQAQNDA 60

Query: 61  AKLAFDFFSLPSLPQPSQQLCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSLPSQ 120
           AKLAFDFFSLPSLPQPSQQLCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSLPSQ
Sbjct: 61  AKLAFDFFSLPSLPQPSQQLCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSLPSQ 120

Query: 121 LGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSKDSPIMSNMDVKFAGQSVEPKIL 180
           LGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSKDSPIMSNMDVKFAGQSVEPKIL
Sbjct: 121 LGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSKDSPIMSNMDVKFAGQSVEPKIL 180

Query: 181 NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240
           NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV
Sbjct: 181 NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240

Query: 241 EIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL 300
           EIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL
Sbjct: 241 EIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL 300

Query: 301 PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTR 360
           PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTR
Sbjct: 301 PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTR 360

Query: 361 KRAPSCDLAIEVPRAIATSSHNVAQPGESNDYVSRIVSKLEAGKSSSSKRIFVCPRQPNM 420
           KRAPSCDLAIEVPRAIATSSHNVAQPGESNDYVSRIVSKLEAGKSSSSKRIFVCPRQPNM
Sbjct: 361 KRAPSCDLAIEVPRAIATSSHNVAQPGESNDYVSRIVSKLEAGKSSSSKRIFVCPRQPNM 420

Query: 421 TIPKESSVLPISDDQWVAFSVETGSSQ 448
           TIPKESSVLPISDDQWVAFSVETGSSQ
Sbjct: 421 TIPKESSVLPISDDQWVAFSVETGSSQ 447

[Close]

BLAST of IVF0003957 vs. ExPASy TrEMBL
Match: A0A1S3CMN7 (double-stranded RNA-binding protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502699 PE=4 SV=1)

HSP 1 Score: 776.9 bits (2005), Expect = 4.4e-221
Identity = 406/447 (90.83%), Postives = 406/447 (90.83%), Query Frame = 0


Query: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSSTPSKSSKQAQNDA 60
           MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSSTPSKSSKQAQNDA
Sbjct: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSSTPSKSSKQAQNDA 60

Query: 61  AKLAFDFFSLPSLPQPSQQLCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSLPSQ 120
           AKLAFDFFSLPSLPQPSQQLCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSLPSQ
Sbjct: 61  AKLAFDFFSLPSLPQPSQQLCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSLPSQ 120

Query: 121 LGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSKDSPIMSNMDVKFAGQSVEPKIL 180
           LGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSK                      
Sbjct: 121 LGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSK---------------------- 180

Query: 181 NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240
                              GMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV
Sbjct: 181 -------------------GMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240

Query: 241 EIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL 300
           EIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL
Sbjct: 241 EIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL 300

Query: 301 PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTR 360
           PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTR
Sbjct: 301 PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTR 360

Query: 361 KRAPSCDLAIEVPRAIATSSHNVAQPGESNDYVSRIVSKLEAGKSSSSKRIFVCPRQPNM 420
           KRAPSCDLAIEVPRAIATSSHNVAQPGESNDYVSRIVSKLEAGKSSSSKRIFVCPRQPNM
Sbjct: 361 KRAPSCDLAIEVPRAIATSSHNVAQPGESNDYVSRIVSKLEAGKSSSSKRIFVCPRQPNM 406

Query: 421 TIPKESSVLPISDDQWVAFSVETGSSQ 448
           TIPKESSVLPISDDQWVAFSVETGSSQ
Sbjct: 421 TIPKESSVLPISDDQWVAFSVETGSSQ 406

[Close]

BLAST of IVF0003957 vs. ExPASy TrEMBL
Match: A0A6J1IZS6 (double-stranded RNA-binding protein 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479924 PE=4 SV=1)

HSP 1 Score: 654.4 bits (1687), Expect = 3.3e-184
Identity = 346/448 (77.23%), Postives = 379/448 (84.60%), Query Frame = 0


Query: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSSTPSKSSKQAQNDA 60
           MFKTKLQELCHRKSY+LP YSVVKQGQDHDPRFEATVTV G +FCS TP KSSKQAQNDA
Sbjct: 1   MFKTKLQELCHRKSYELPVYSVVKQGQDHDPRFEATVTVAGNKFCSQTPCKSSKQAQNDA 60

Query: 61  AKLAFDFFSLPSLPQPSQQLCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSLPSQ 120
           AKLAFDFFSLPS P+  +   PQP  PESS P + +     FS PSL +SSFPQPSLPSQ
Sbjct: 61  AKLAFDFFSLPSSPK-LEPYHPQPSFPESSPPLEQLRYSPQFSHPSLHISSFPQPSLPSQ 120

Query: 121 LGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSKDSPIMSNMDVKFAGQSVEPKIL 180
              FGA  NLDN V+ P RP VKLEVAN+SS L ES+KDS I SNM VKF+ QSVEPKI 
Sbjct: 121 SDTFGATTNLDNTVSYPQRP-VKLEVANESSGLVESTKDSSITSNMGVKFSAQSVEPKIQ 180

Query: 181 NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240
           NTDKSPVV+ FDKEC KLTGM+HLYKNKLQNF+QK++LTLP+YTCERDGPPHASRFRCKV
Sbjct: 181 NTDKSPVVDYFDKECSKLTGMEHLYKNKLQNFAQKKNLTLPVYTCERDGPPHASRFRCKV 240

Query: 241 EIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL 300
           EIDGKTY SPEFH TLKDAENAVAKVAL+  CQDG QE  DSGLYKNLLQEMAQK GLGL
Sbjct: 241 EIDGKTYESPEFHATLKDAENAVAKVALLSSCQDGVQE--DSGLYKNLLQEMAQKKGLGL 300

Query: 301 PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTR 360
           P YSTSQSGE+HVPVFVSTVK+GE NFEG+ SRTKKQAEMSAAK A+ +IKEGSQSISTR
Sbjct: 301 PVYSTSQSGEIHVPVFVSTVKIGEANFEGEQSRTKKQAEMSAAKAAYMSIKEGSQSISTR 360

Query: 361 KRAP-SCDLAIEVPRAIATSSHNVAQPGESNDYVSRIVSKLEAGKSSSSKRIFVCPRQPN 420
           KRAP SCD+  EV R IA SS NVAQPG +NDYV  +VSKLEAGKSSSSKR+ VCPRQPN
Sbjct: 361 KRAPSSCDIDHEVSRDIAISSRNVAQPGNTNDYVLNLVSKLEAGKSSSSKRVIVCPRQPN 420

Query: 421 MTIPKESSVLPISDDQWVAFSVETGSSQ 448
           MT PK+ +VLP+SDDQWVAFS+ T ++Q
Sbjct: 421 MTFPKDITVLPVSDDQWVAFSLSTKANQ 444

[Close]

BLAST of IVF0003957 vs. ExPASy TrEMBL
Match: A0A5D3D5D0 (Double-stranded RNA-binding protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00620 PE=4 SV=1)

HSP 1 Score: 644.0 bits (1660), Expect = 4.5e-181
Identity = 326/327 (99.69%), Postives = 327/327 (100.00%), Query Frame = 0


Query: 121 LGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSKDSPIMSNMDVKFAGQSVEPKIL 180
           +GNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSKDSPIMSNMDVKFAGQSVEPKIL
Sbjct: 47  IGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSKDSPIMSNMDVKFAGQSVEPKIL 106

Query: 181 NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240
           NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV
Sbjct: 107 NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 166

Query: 241 EIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL 300
           EIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL
Sbjct: 167 EIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL 226

Query: 301 PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTR 360
           PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTR
Sbjct: 227 PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTR 286

Query: 361 KRAPSCDLAIEVPRAIATSSHNVAQPGESNDYVSRIVSKLEAGKSSSSKRIFVCPRQPNM 420
           KRAPSCDLAIEVPRAIATSSHNVAQPGESNDYVSRIVSKLEAGKSSSSKRIFVCPRQPNM
Sbjct: 287 KRAPSCDLAIEVPRAIATSSHNVAQPGESNDYVSRIVSKLEAGKSSSSKRIFVCPRQPNM 346

Query: 421 TIPKESSVLPISDDQWVAFSVETGSSQ 448
           TIPKESSVLPISDDQWVAFSVETGSSQ
Sbjct: 347 TIPKESSVLPISDDQWVAFSVETGSSQ 373

[Close]

BLAST of IVF0003957 vs. ExPASy TrEMBL
Match: A0A6J1EVN0 (double-stranded RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436989 PE=4 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 1.4e-177
Identity = 348/499 (69.74%), Postives = 381/499 (76.35%), Query Frame = 0


Query: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSSTPSKSSKQAQNDA 60
           MFKTKLQELCHRKSY+LP YSVVKQGQDHDPRFEATVTV G +FCS TP KSSKQAQNDA
Sbjct: 1   MFKTKLQELCHRKSYELPVYSVVKQGQDHDPRFEATVTVAGNKFCSQTPCKSSKQAQNDA 60

Query: 61  AKLAFDFFSLPSLPQPSQQLCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSLPSQ 120
           AKLAFDFFSLPS P+  +   PQP  PESS P + +     FS PSL +SSFPQPSLPSQ
Sbjct: 61  AKLAFDFFSLPSSPK-LEPFHPQPSFPESSPPLEQLRYSPQFSHPSLHISSFPQPSLPSQ 120

Query: 121 LGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSKDSPIMSNMDVKFAGQSVEPKIL 180
              FGA +NLDN V+ P RPE KLEVAN+ SEL ES+KDS I SNMDVKF+ QSVEPKI 
Sbjct: 121 SDTFGATSNLDNPVSYPLRPE-KLEVANECSELVESTKDSSITSNMDVKFSAQSVEPKIQ 180

Query: 181 NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240
           NTDKSPVV+ FDKEC KLTGMQHLYKNKLQNF+QK++LTLP+YTCERDGPPHASRFR KV
Sbjct: 181 NTDKSPVVDYFDKECSKLTGMQHLYKNKLQNFAQKKNLTLPVYTCERDGPPHASRFRSKV 240

Query: 241 EIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL 300
           EIDGKTY SPEFH TLKDAENAVAKVAL+  CQDG QE  DSGLYKNLLQEMAQK GLGL
Sbjct: 241 EIDGKTYESPEFHATLKDAENAVAKVALLSSCQDGVQE--DSGLYKNLLQEMAQKKGLGL 300

Query: 301 PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKE-------- 360
           PAYSTSQSGE+HVPVFVSTVK+GE NFEG+ SRTKKQAEMSAAK A+ +IKE        
Sbjct: 301 PAYSTSQSGEIHVPVFVSTVKIGEANFEGEQSRTKKQAEMSAAKAAYISIKEGKSSSTSP 360

Query: 361 -------------------------------------------GSQSISTRKRAP-SCDL 420
                                                      GSQSISTRKRAP SCD+
Sbjct: 361 RGRASPQGISCRLQSSVSTDLELQVRSSPVISHPAFEKQPNDGGSQSISTRKRAPSSCDI 420

Query: 421 AIEVPRAIATSSHNVAQPGESNDYVSRIVSKLEAGKSSSSKRIFVCPRQPNMTIPKESSV 448
             EV R IA SS NVAQPG +NDYV  +VSKLEAGKSSSSKR+ VCPRQPNMT PK+ +V
Sbjct: 421 DHEVCRDIAISSRNVAQPGNTNDYVLNLVSKLEAGKSSSSKRVIVCPRQPNMTFPKDITV 480

[Close]

BLAST of IVF0003957 vs. NCBI nr
Match: XP_008464954.1 (PREDICTED: double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 878 bits (2268), Expect = 0.0
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 0


Query: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSSTPSKSSKQAQNDA 60
           MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSSTPSKSSKQAQNDA
Sbjct: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSSTPSKSSKQAQNDA 60

Query: 61  AKLAFDFFSLPSLPQPSQQLCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSLPSQ 120
           AKLAFDFFSLPSLPQPSQQLCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSLPSQ
Sbjct: 61  AKLAFDFFSLPSLPQPSQQLCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSLPSQ 120

Query: 121 LGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSKDSPIMSNMDVKFAGQSVEPKIL 180
           LGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSKDSPIMSNMDVKFAGQSVEPKIL
Sbjct: 121 LGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSKDSPIMSNMDVKFAGQSVEPKIL 180

Query: 181 NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240
           NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV
Sbjct: 181 NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240

Query: 241 EIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL 300
           EIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL
Sbjct: 241 EIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL 300

Query: 301 PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTR 360
           PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTR
Sbjct: 301 PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTR 360

Query: 361 KRAPSCDLAIEVPRAIATSSHNVAQPGESNDYVSRIVSKLEAGKSSSSKRIFVCPRQPNM 420
           KRAPSCDLAIEVPRAIATSSHNVAQPGESNDYVSRIVSKLEAGKSSSSKRIFVCPRQPNM
Sbjct: 361 KRAPSCDLAIEVPRAIATSSHNVAQPGESNDYVSRIVSKLEAGKSSSSKRIFVCPRQPNM 420

Query: 421 TIPKESSVLPISDDQWVAFSVETGSSQ 447
           TIPKESSVLPISDDQWVAFSVETGSSQ
Sbjct: 421 TIPKESSVLPISDDQWVAFSVETGSSQ 447

[Close]

BLAST of IVF0003957 vs. NCBI nr
Match: XP_004141127.1 (double-stranded RNA-binding protein 1 [Cucumis sativus] >KAE8651270.1 hypothetical protein Csa_001302 [Cucumis sativus])

HSP 1 Score: 813 bits (2101), Expect = 7.11e-296
Identity = 416/447 (93.06%), Postives = 428/447 (95.75%), Query Frame = 0


Query: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSSTPSKSSKQAQNDA 60
           MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCS TPSKSSKQAQNDA
Sbjct: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSPTPSKSSKQAQNDA 60

Query: 61  AKLAFDFFSLPSLPQPSQQLCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSLPSQ 120
           AKLAFDFFSLPSLPQP +QLCPQP+LP+SSSPPKLIPSI PF PPSL+LSSFPQPSL SQ
Sbjct: 61  AKLAFDFFSLPSLPQPPEQLCPQPLLPQSSSPPKLIPSIPPF-PPSLNLSSFPQPSLTSQ 120

Query: 121 LGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSKDSPIMSNMDVKFAGQSVEPKIL 180
           LGNFGAI NLDNKVTSPPRPEVK EV+ KSSELKESSKDSPIMSNMDVKF  QSVEP+I 
Sbjct: 121 LGNFGAITNLDNKVTSPPRPEVKHEVSYKSSELKESSKDSPIMSNMDVKFTAQSVEPRIQ 180

Query: 181 NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240
           NT+KSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKR LTLPMYTCERDGPPHASRFRCKV
Sbjct: 181 NTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKV 240

Query: 241 EIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL 300
           EIDGKTY S EFHGTLKDAENAVAKVALM LCQDGAQEDSDSGLYKNLLQEMAQKGGLGL
Sbjct: 241 EIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL 300

Query: 301 PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTR 360
           PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVA+FTIKEGSQSISTR
Sbjct: 301 PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTR 360

Query: 361 KRAPSCDLAIEVPRAIATSSHNVAQPGESNDYVSRIVSKLEAGKSSSSKRIFVCPRQPNM 420
           KRAPSCDLA+E+PR IATSSHNVAQPG+S DYVSRIVS+LEAGKSSSSKRIFVCPRQPNM
Sbjct: 361 KRAPSCDLALEIPRDIATSSHNVAQPGQSKDYVSRIVSRLEAGKSSSSKRIFVCPRQPNM 420

Query: 421 TIPKESSVLPISDDQWVAFSVETGSSQ 447
           TIPKESSVLPISDDQWVAFS ETG SQ
Sbjct: 421 TIPKESSVLPISDDQWVAFSFETGPSQ 446

[Close]

BLAST of IVF0003957 vs. NCBI nr
Match: XP_008464955.1 (PREDICTED: double-stranded RNA-binding protein 1 isoform X2 [Cucumis melo])

HSP 1 Score: 777 bits (2006), Expect = 4.68e-282
Identity = 406/447 (90.83%), Postives = 406/447 (90.83%), Query Frame = 0


Query: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSSTPSKSSKQAQNDA 60
           MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSSTPSKSSKQAQNDA
Sbjct: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSSTPSKSSKQAQNDA 60

Query: 61  AKLAFDFFSLPSLPQPSQQLCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSLPSQ 120
           AKLAFDFFSLPSLPQPSQQLCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSLPSQ
Sbjct: 61  AKLAFDFFSLPSLPQPSQQLCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSLPSQ 120

Query: 121 LGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSKDSPIMSNMDVKFAGQSVEPKIL 180
           LGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSK                      
Sbjct: 121 LGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSK---------------------- 180

Query: 181 NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240
                              GMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV
Sbjct: 181 -------------------GMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240

Query: 241 EIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL 300
           EIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL
Sbjct: 241 EIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL 300

Query: 301 PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTR 360
           PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTR
Sbjct: 301 PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTR 360

Query: 361 KRAPSCDLAIEVPRAIATSSHNVAQPGESNDYVSRIVSKLEAGKSSSSKRIFVCPRQPNM 420
           KRAPSCDLAIEVPRAIATSSHNVAQPGESNDYVSRIVSKLEAGKSSSSKRIFVCPRQPNM
Sbjct: 361 KRAPSCDLAIEVPRAIATSSHNVAQPGESNDYVSRIVSKLEAGKSSSSKRIFVCPRQPNM 406

Query: 421 TIPKESSVLPISDDQWVAFSVETGSSQ 447
           TIPKESSVLPISDDQWVAFSVETGSSQ
Sbjct: 421 TIPKESSVLPISDDQWVAFSVETGSSQ 406

[Close]

BLAST of IVF0003957 vs. NCBI nr
Match: XP_038904852.1 (double-stranded RNA-binding protein 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 701 bits (1808), Expect = 2.10e-250
Identity = 379/501 (75.65%), Postives = 400/501 (79.84%), Query Frame = 0


Query: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSSTPSKSSKQAQNDA 60
           MFKT+LQELCHRKSY+LPEYSVVKQGQDHDPRFEATVTVDGKQF S  P KSSKQAQN+A
Sbjct: 1   MFKTQLQELCHRKSYQLPEYSVVKQGQDHDPRFEATVTVDGKQFSSLVPCKSSKQAQNEA 60

Query: 61  AKLAFDFFSLPSLPQPSQQ---LCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSL 120
           AK+AFDFFSLPS PQP  Q    CPQP+LPESS PPKLIP I PFS  SLD+SSFPQP+L
Sbjct: 61  AKIAFDFFSLPSSPQPPLQPDHSCPQPLLPESSPPPKLIPCIPPFSHSSLDVSSFPQPTL 120

Query: 121 PSQLGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSKDSPIMSNMDVKFAGQSVEP 180
           PS LG+ GAI NLDN VTSP RPEV LEVAN+S EL++S KDS IMSNMDVKFA Q VEP
Sbjct: 121 PSHLGSIGAITNLDNTVTSPLRPEVTLEVANESFELEKSPKDSSIMSNMDVKFAAQLVEP 180

Query: 181 KILNTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFR 240
           KI NTDKSPVVEDFDKECLKLTGMQHLYKNKLQN +QKR L+LPMYTCERDGPPHASRFR
Sbjct: 181 KIQNTDKSPVVEDFDKECLKLTGMQHLYKNKLQNLAQKRGLSLPMYTCERDGPPHASRFR 240

Query: 241 CKVEIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGG 300
           CKVEIDGKTY SPEFHGTLKDAENAVAKVAL+ LCQDGAQEDS  GLYKNLLQEMAQK G
Sbjct: 241 CKVEIDGKTYESPEFHGTLKDAENAVAKVALLSLCQDGAQEDS--GLYKNLLQEMAQKRG 300

Query: 301 LGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEG---- 360
           LGLP YSTSQSGEVHVPVFVSTVKVGEE  EGKPSRTKKQAEMSAAKVA+FTIKEG    
Sbjct: 301 LGLPIYSTSQSGEVHVPVFVSTVKVGEETSEGKPSRTKKQAEMSAAKVAYFTIKEGKIAS 360

Query: 361 ----------------------------------------------SQSISTRKRAPSCD 420
                                                         SQSISTRKRAPSCD
Sbjct: 361 PRERDSQAISSSLQSNVSTDQDLQVISSPVISHPSMSIEKQPNDGGSQSISTRKRAPSCD 420

Query: 421 LAIEVPRAIATSSHNVAQPGESNDYVSRI-VSKLEAGKSSSSKRIFVCPRQPNMTIPKES 447
           L IE  R IA SSHNVA  GESNDYVS + VSKLEAGKSSSSKR+ VCPRQPNMT PK +
Sbjct: 421 LGIEASRDIAISSHNVAHLGESNDYVSNLLVSKLEAGKSSSSKRVIVCPRQPNMTFPKGT 480

[Close]

BLAST of IVF0003957 vs. NCBI nr
Match: XP_038904854.1 (double-stranded RNA-binding protein 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 669 bits (1726), Expect = 3.91e-238
Identity = 367/501 (73.25%), Postives = 388/501 (77.45%), Query Frame = 0


Query: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSSTPSKSSKQAQNDA 60
           MFKT+LQELCHRKSY+LPEYSVVKQGQDHDPRFEATVTVDGKQF S  P KSSKQAQN+A
Sbjct: 1   MFKTQLQELCHRKSYQLPEYSVVKQGQDHDPRFEATVTVDGKQFSSLVPCKSSKQAQNEA 60

Query: 61  AKLAFDFFSLPSLPQPSQQ---LCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSL 120
           AK+AFDFFSLPS PQP  Q    CPQP+LPESS PPKLIP I PFS  SLD+SSFPQP+L
Sbjct: 61  AKIAFDFFSLPSSPQPPLQPDHSCPQPLLPESSPPPKLIPCIPPFSHSSLDVSSFPQPTL 120

Query: 121 PSQLGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSKDSPIMSNMDVKFAGQSVEP 180
           PS LG+ GAI NLDN VTSP RPEV LEVAN+S EL++S K              Q VEP
Sbjct: 121 PSHLGSIGAITNLDNTVTSPLRPEVTLEVANESFELEKSPK-------------AQLVEP 180

Query: 181 KILNTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFR 240
           KI NTDKSPVVEDFDKECLKLTGMQHLYKNKLQN +QKR L+LPMYTCERDGPPHASRFR
Sbjct: 181 KIQNTDKSPVVEDFDKECLKLTGMQHLYKNKLQNLAQKRGLSLPMYTCERDGPPHASRFR 240

Query: 241 CKVEIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGG 300
           CKVEIDGKTY SPEFHGTLKDAENAVAKVAL+ LCQDGAQEDS  GLYKNLLQEMAQK G
Sbjct: 241 CKVEIDGKTYESPEFHGTLKDAENAVAKVALLSLCQDGAQEDS--GLYKNLLQEMAQKRG 300

Query: 301 LGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEG---- 360
           LGLP YSTSQSGEVHVPVFVSTVKVGEE  EGKPSRTKKQAEMSAAKVA+FTIKEG    
Sbjct: 301 LGLPIYSTSQSGEVHVPVFVSTVKVGEETSEGKPSRTKKQAEMSAAKVAYFTIKEGKIAS 360

Query: 361 ----------------------------------------------SQSISTRKRAPSCD 420
                                                         SQSISTRKRAPSCD
Sbjct: 361 PRERDSQAISSSLQSNVSTDQDLQVISSPVISHPSMSIEKQPNDGGSQSISTRKRAPSCD 420

Query: 421 LAIEVPRAIATSSHNVAQPGESNDYVSRI-VSKLEAGKSSSSKRIFVCPRQPNMTIPKES 447
           L IE  R IA SSHNVA  GESNDYVS + VSKLEAGKSSSSKR+ VCPRQPNMT PK +
Sbjct: 421 LGIEASRDIAISSHNVAHLGESNDYVSNLLVSKLEAGKSSSSKRVIVCPRQPNMTFPKGT 480

[Close]

BLAST of IVF0003957 vs. TAIR 10
Match: AT3G62800.1 (double-stranded-RNA-binding protein 4 )

HSP 1 Score: 147.1 bits (370), Expect = 3.3e-35
Identity = 81/165 (49.09%), Postives = 107/165 (64.85%), Query Frame = 0


Query: 201 MQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKVEIDGKTYGSPEFHGTLKDAE 260
           M H+YK +LQ ++ + +L LP+Y  ER+GPPHA RFRC V   G+T+ S EF  TLK AE
Sbjct: 1   MDHVYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAE 60

Query: 261 NAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTV 320
           +A AK+A+  L    + E  D   YKNLLQE+AQK    LP Y+T+ SG  H P F STV
Sbjct: 61  HAAAKIAVASLTPQ-SPEGIDVA-YKNLLQEIAQKESSLLPFYATATSGPSHAPTFTSTV 120

Query: 321 KVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTRKRAPS 366
           +   + F G+ ++TKK AEMSAAKVAF +IK G+ + +     PS
Sbjct: 121 EFAGKVFSGEEAKTKKLAEMSAAKVAFMSIKNGNSNQTGSPTLPS 163

[Close]

BLAST of IVF0003957 vs. TAIR 10
Match: AT3G62800.2 (double-stranded-RNA-binding protein 4 )

HSP 1 Score: 147.1 bits (370), Expect = 3.3e-35
Identity = 81/165 (49.09%), Postives = 107/165 (64.85%), Query Frame = 0


Query: 201 MQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKVEIDGKTYGSPEFHGTLKDAE 260
           M H+YK +LQ ++ + +L LP+Y  ER+GPPHA RFRC V   G+T+ S EF  TLK AE
Sbjct: 1   MDHVYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAE 60

Query: 261 NAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTV 320
           +A AK+A+  L    + E  D   YKNLLQE+AQK    LP Y+T+ SG  H P F STV
Sbjct: 61  HAAAKIAVASLTPQ-SPEGIDVA-YKNLLQEIAQKESSLLPFYATATSGPSHAPTFTSTV 120

Query: 321 KVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTRKRAPS 366
           +   + F G+ ++TKK AEMSAAKVAF +IK G+ + +     PS
Sbjct: 121 EFAGKVFSGEEAKTKKLAEMSAAKVAFMSIKNGNSNQTGSPTLPS 163

[Close]

BLAST of IVF0003957 vs. TAIR 10
Match: AT3G62800.3 (double-stranded-RNA-binding protein 4 )

HSP 1 Score: 147.1 bits (370), Expect = 3.3e-35
Identity = 81/165 (49.09%), Postives = 107/165 (64.85%), Query Frame = 0


Query: 201 MQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKVEIDGKTYGSPEFHGTLKDAE 260
           M H+YK +LQ ++ + +L LP+Y  ER+GPPHA RFRC V   G+T+ S EF  TLK AE
Sbjct: 1   MDHVYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAE 60

Query: 261 NAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTV 320
           +A AK+A+  L    + E  D   YKNLLQE+AQK    LP Y+T+ SG  H P F STV
Sbjct: 61  HAAAKIAVASLTPQ-SPEGIDVA-YKNLLQEIAQKESSLLPFYATATSGPSHAPTFTSTV 120

Query: 321 KVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTRKRAPS 366
           +   + F G+ ++TKK AEMSAAKVAF +IK G+ + +     PS
Sbjct: 121 EFAGKVFSGEEAKTKKLAEMSAAKVAFMSIKNGNSNQTGSPTLPS 163

[Close]

BLAST of IVF0003957 vs. TAIR 10
Match: AT2G28380.1 (dsRNA-binding protein 2 )

HSP 1 Score: 137.5 bits (345), Expect = 2.6e-32
Identity = 88/265 (33.21%), Postives = 142/265 (53.58%), Query Frame = 0


Query: 204 LYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKVEIDGKTYGSPEFHGTLKDAENAV 263
           +YKN+LQ  +Q+    LP YTC R+GP HA RF+  V  +G+ + SP++  TL+ AE++ 
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 264 AKVALMCLCQDGAQED------SDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFV 323
           A+VAL  L   G           ++G+YKNLLQE+AQ+ G  LP Y+T +SG  H PVF 
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 324 STVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKEGSQSISTRKRAPSCDLAIE---VPR 383
            TV++    F G P++ KKQAE +AA  A+ ++K+ ++  S+    P     +E   + R
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 384 AIAT----------SSHNVAQPGESNDYVSRIVSKLEAGKSSSSKRI--FVCPRQPNMTI 443
           A+            SS +   P     ++  +         +++ RI  F+CP+QP+ + 
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQPSRS- 240

Query: 444 PKESSVLPISDDQWVAFSVETGSSQ 448
            + S       D+ +A ++E+ S Q
Sbjct: 241 SRSSLAATSGIDRIMAAALESRSYQ 264

[Close]

BLAST of IVF0003957 vs. TAIR 10
Match: AT3G26932.1 (dsRNA-binding protein 3 )

HSP 1 Score: 136.3 bits (342), Expect = 5.8e-32
Identity = 65/155 (41.94%), Postives = 101/155 (65.16%), Query Frame = 0


Query: 204 LYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKVEIDGKTYGSPEFHGTLKDAENAV 263
           +YKN+LQ  +Q+   +LP YTC R+GP HA RF+  V  +G+ + SP +  TL+ AE++ 
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 264 AKVALMCLCQDGAQED------SDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFV 323
           A+VAL  L   G  +        ++G+YKNLLQE A + GL LP Y++ +SG  H+P F 
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 324 STVKVGEENFEGKPSRTKKQAEMSAAKVAFFTIKE 353
            TV++   +F G+ ++TKKQAE +AA  A+F++++
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRK 155

The following BLAST results are available for this feature:

BLAST of IVF0003957 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5N8Z0	1.7e-36	29.32	Double-stranded RNA-binding protein 1 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q8H1D4	4.7e-34	49.09	Double-stranded RNA-binding protein 4 OS=Arabidopsis thaliana OX=3702 GN=DBR4 PE...	[more]
Q9SKN2	3.7e-31	33.21	Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=DRB2 PE...	[more]
Q9LJF5	8.2e-31	41.94	Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DRB3 PE...	[more]
Q9AV50	8.2e-31	44.52	Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of IVF0003957 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CMT3	2.4e-251	100.00	double-stranded RNA-binding protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A1S3CMN7	4.4e-221	90.83	double-stranded RNA-binding protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1IZS6	3.3e-184	77.23	double-stranded RNA-binding protein 1-like isoform X2 OS=Cucurbita maxima OX=366...	[more]
A0A5D3D5D0	4.5e-181	99.69	Double-stranded RNA-binding protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1EVN0	1.4e-177	69.74	double-stranded RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of IVF0003957 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464954.1	0.0	100.00	PREDICTED: double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo]	[more]
XP_004141127.1	7.11e-296	93.06	double-stranded RNA-binding protein 1 [Cucumis sativus] >KAE8651270.1 hypothetic...	[more]
XP_008464955.1	4.68e-282	90.83	PREDICTED: double-stranded RNA-binding protein 1 isoform X2 [Cucumis melo]	[more]
XP_038904852.1	2.10e-250	75.65	double-stranded RNA-binding protein 1-like isoform X1 [Benincasa hispida]	[more]
XP_038904854.1	3.91e-238	73.25	double-stranded RNA-binding protein 1-like isoform X2 [Benincasa hispida]	[more]

BLAST of IVF0003957 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62800.1	3.3e-35	49.09	double-stranded-RNA-binding protein 4	[more]
AT3G62800.2	3.3e-35	49.09	double-stranded-RNA-binding protein 4	[more]
AT3G62800.3	3.3e-35	49.09	double-stranded-RNA-binding protein 4	[more]
AT2G28380.1	2.6e-32	33.21	dsRNA-binding protein 2	[more]
AT3G26932.1	5.8e-32	41.94	dsRNA-binding protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014720	Double-stranded RNA-binding domain	SMART	SM00358	DRBM_3	coord: 2..69 e-value: 1.7E-14 score: 64.2 coord: 205..272 e-value: 3.1E-12 score: 56.7 coord: 285..351 e-value: 2.0E-14 score: 63.9
IPR014720	Double-stranded RNA-binding domain	PFAM	PF00035	dsrm	coord: 205..268 e-value: 1.2E-12 score: 48.4 coord: 285..346 e-value: 4.2E-12 score: 46.6 coord: 3..65 e-value: 1.4E-15 score: 57.8
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 204..273 score: 11.38275
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 1..70 score: 14.125971
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 284..352 score: 10.824394
None	No IPR available	GENE3D	3.30.160.20		coord: 201..271 e-value: 1.6E-22 score: 81.6
None	No IPR available	GENE3D	3.30.160.20		coord: 1..69 e-value: 1.6E-21 score: 78.3
None	No IPR available	GENE3D	3.30.160.20		coord: 283..354 e-value: 7.5E-21 score: 76.1
None	No IPR available	PANTHER	PTHR46031	FAMILY NOT NAMED	coord: 394..442 coord: 1..373
None	No IPR available	PANTHER	PTHR46031:SF16	DOUBLE-STRANDED RNA-BINDING PROTEIN 4	coord: 394..442 coord: 1..373
None	No IPR available	CDD	cd10845	DSRM_RNAse_III_family	coord: 2..68 e-value: 3.8958E-16 score: 70.5991
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 284..350
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 2..91
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 199..271

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0003957.4	IVF0003957.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003725	double-stranded RNA binding