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IVF0003804 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGAAGCTCCTTCGCTTCTCTCTCTATGCATCGCCCTAATCACAGATGAGATTGTTCAAAGTAATCATCTCCATACTTCTTCTATTACTGATACTCCGTTCCTACTCCCGATTCGTCTCTCTTCCCTGTTTTCTTCATCCGTTGTTCTTGTTTACTTTCAGGGGATGACGTTCCACCGTCTCTCTACGACCTTCCTCCTGACTTGTTGGATACTCTGGCTTTGCAGTTGCCGCCCTTGGCTTTACACAATTTACAATCTGGAATGTACGTTCTCCCTCCCTAA ATGGCGGAAGCTCCTTCGCTTCTCTCTCTATGCATCGCCCTAATCACAGATGAGATTGTTCAAAGGGATGACGTTCCACCGTCTCTCTACGACCTTCCTCCTGACTTGTTGGATACTCTGGCTTTGCAGTTGCCGCCCTTGGCTTTACACAATTTACAATCTGGAATGTACGTTCTCCCTCCCTAA ATGGCGGAAGCTCCTTCGCTTCTCTCTCTATGCATCGCCCTAATCACAGATGAGATTGTTCAAAGGGATGACGTTCCACCGTCTCTCTACGACCTTCCTCCTGACTTGTTGGATACTCTGGCTTTGCAGTTGCCGCCCTTGGCTTTACACAATTTACAATCTGGAATGTACGTTCTCCCTCCCTAA MAEAPSLLSLCIALITDEIVQRDDVPPSLYDLPPDLLDTLALQLPPLALHNLQSGMYVLPP Homology
BLAST of IVF0003804 vs. ExPASy TrEMBL
Match: A0A5D3C7E3 (NACHT, LRR and PYD domains-containing protein 5 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00940 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.1e-24 Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of IVF0003804 vs. ExPASy TrEMBL
Match: A0A1S3CFT7 (uncharacterized protein LOC103500467 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500467 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 4.2e-21 Identity = 54/56 (96.43%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of IVF0003804 vs. ExPASy TrEMBL
Match: A0A1S3CFV1 (uncharacterized protein LOC103500467 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103500467 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 4.2e-21 Identity = 54/56 (96.43%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of IVF0003804 vs. ExPASy TrEMBL
Match: A0A1S3CFY9 (uncharacterized protein LOC103500467 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500467 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 4.2e-21 Identity = 54/56 (96.43%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of IVF0003804 vs. ExPASy TrEMBL
Match: A0A0A0K6N3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G330380 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.6e-20 Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 0
BLAST of IVF0003804 vs. NCBI nr
Match: KAA0050632.1 (NACHT, LRR and PYD domains-containing protein 5 isoform X3 [Cucumis melo var. makuwa] >TYK07801.1 NACHT, LRR and PYD domains-containing protein 5 isoform X3 [Cucumis melo var. makuwa]) HSP 1 Score: 120 bits (301), Expect = 3.50e-34 Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of IVF0003804 vs. NCBI nr
Match: XP_008461992.1 (PREDICTED: uncharacterized protein LOC103500467 isoform X3 [Cucumis melo]) HSP 1 Score: 108 bits (271), Expect = 5.38e-26 Identity = 54/56 (96.43%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of IVF0003804 vs. NCBI nr
Match: XP_008461991.1 (PREDICTED: uncharacterized protein LOC103500467 isoform X2 [Cucumis melo]) HSP 1 Score: 108 bits (271), Expect = 5.99e-26 Identity = 54/56 (96.43%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of IVF0003804 vs. NCBI nr
Match: XP_008461989.1 (PREDICTED: uncharacterized protein LOC103500467 isoform X1 [Cucumis melo] >XP_008461990.1 PREDICTED: uncharacterized protein LOC103500467 isoform X1 [Cucumis melo]) HSP 1 Score: 108 bits (271), Expect = 8.37e-26 Identity = 54/56 (96.43%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of IVF0003804 vs. NCBI nr
Match: XP_004139728.1 (protein NLRC3 isoform X2 [Cucumis sativus] >KGN44867.2 hypothetical protein Csa_016637 [Cucumis sativus]) HSP 1 Score: 98.2 bits (243), Expect = 5.48e-22 Identity = 49/56 (87.50%), Postives = 53/56 (94.64%), Query Frame = 0
BLAST of IVF0003804 vs. TAIR 10
Match: AT2G20210.1 (RNI-like superfamily protein ) HSP 1 Score: 48.5 bits (114), Expect = 2.2e-06 Identity = 24/56 (42.86%), Postives = 35/56 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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