IVF0003740 (gene) Melon (IVF77) v1

Overview


Name	IVF0003740
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ubiquitin-conjugating enzyme E2 20
Location	chr05: 1201234 .. 1203029 (-)
RNA-Seq Expression	IVF0003740
Synteny	IVF0003740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGCGTTAAAGCAATGACCAAAAGTAGCCGTTGGAAATTCAAAAAGCAAACCTAATTGGAATCTTCGCCTTCTCCGTAACGTTCACTAAATTTTTTGAATATTTATCCTTTCATATCAAATCCCTAATTTCTTCATCTCTTTCCTTCGCTTCAATTCCCCAAATTTCCTCTCTCCCCTCTCTAACAACATCTCTTTGATTCTTCTTTGGGGGGAGAATTGCTTCCATCTTCTTCAACAATCTTCGTATCTACTTCGGATCAAAGAGATAATGGCGGCCATCAACCGGTACACAGACAACACAGCCCCGGCTAACCCGGTTGTTTCTCCAGCCAAGCAATCCTTGCCGCCTGCCAAAACCGCCGACTCTCAATCTGTTCTCAAGAGGTATGAACCTCTCCCCATCTTCTCTATCGCTGCGGATCCACCGCTTATCGCATCTGATTTCTGCTTTATGTGGTCTTGGGGCTTTGTTGAACTTTAAGCTGGATGAGGTTGTTCTAGAGTTCCGGATCTTGTGATCTTTTACAATCTGAACTGATTTTTTATATTGATTGTTTGATGGTTTTTCTTAATGATCTTTTTAGGGTTTTAGGGGTAATTTGAAGAAAATAGTAAAGAATCAATCTTACTGGGAACTCTGTTTGTTTCGACCAACTAACAATTTTCTTGTTATTTTCGTTGTATTTTCTTCTTGCTCAGGTTGCAGTCTGAATTAATGGCATTAATGGTAAGACTTGCTTCCATCTGATTTCTTGGACTGGTAATTCTTGAAGTAGTTGGAAATGTGATTATTTAAAACTCCATTTTTTACAATATTGCAGATGAGTGGAGACTCTGGGATCTCAGCTTTTCCCGAGGAAGATAACATTTTTTGTTGGAAAGGGACAATAACTGGAAGCAAAGAGACAGTGTTTGAAGGAACAGAGTACAGGTTATCATTTTCATTCCCTAATGATTACCCTTTTAAGCCTCCAAAGGTCAAGTTTGAGACTGGCTGCTTTCACCCAAATGTGGATGTTTATGGCAATATTTGCTTGGATATACTTCAGGTAATCTTCAGCTCCGGATGAAATCTTCAATATTGAAATGTAACTTCTCTGATTTTGTTAGCATTACAGCAACCTAAAGTGAGAAATGTATTATTTCTTGTAGGATAAATGGTCATCAGCATATGATGTGAGAACTATACTTCTATCAATTCAGAGTCTGCTCGGAGGTAATAGTTCTTTTATGAATTCATCTTTAAAGCACAAGTTTTCCCCCCATAAAAGTACTTGGTCTTTGAATTATGAAAGTTCTCCAACTATTTATGGGATAACTCTGGCAAAACAAACTTGGTAGAGAACTTGAATATATAACTTTGTTGATTAAAACATTATCTATCTTTTAAAGTTTAGAAACAATAGTTCCATCTATTGCGACTTGGATGGTCATATTTCGACCTGAATCCTTTTTTATATGGAGTTGAATATAGAATGTGCAATAATAAGCCTTTGCCATTTATTTGCAGAACCGAACATAAGTTCACCTCTAAACACTCAGGCAGCCCAATTGTGGAGTAATCAAGAAGGTGGGGTTTCTATTATTTTTCTTTCCTCATTAAATTTGTGTTTCTATGTTATGAAAGTTGGCTCACTCCATATATCTATGTTTGTTTGTAGAATACCGGAAAATGGTGGAGAAATTGTACAAGCCTCCAACAGCAGCTTAGCTTTGTTTTTTTAGACTGACTAGGATTTGTATCTCTCTTTTTGCGCTAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAAGAGA

mRNA sequence

GTGGCGTTAAAGCAATGACCAAAAGTAGCCGTTGGAAATTCAAAAAGCAAACCTAATTGGAATCTTCGCCTTCTCCGTAACGTTCACTAAATTTTTTGAATATTTATCCTTTCATATCAAATCCCTAATTTCTTCATCTCTTTCCTTCGCTTCAATTCCCCAAATTTCCTCTCTCCCCTCTCTAACAACATCTCTTTGATTCTTCTTTGGGGGGAGAATTGCTTCCATCTTCTTCAACAATCTTCGTATCTACTTCGGATCAAAGAGATAATGGCGGCCATCAACCGGTACACAGACAACACAGCCCCGGCTAACCCGGTTGTTTCTCCAGCCAAGCAATCCTTGCCGCCTGCCAAAACCGCCGACTCTCAATCTGTTCTCAAGAGGTTGCAGTCTGAATTAATGGCATTAATGATGAGTGGAGACTCTGGGATCTCAGCTTTTCCCGAGGAAGATAACATTTTTTGTTGGAAAGGGACAATAACTGGAAGCAAAGAGACAGTGTTTGAAGGAACAGAGTACAGGTTATCATTTTCATTCCCTAATGATTACCCTTTTAAGCCTCCAAAGGTCAAGTTTGAGACTGGCTGCTTTCACCCAAATGTGGATGTTTATGGCAATATTTGCTTGGATATACTTCAGGATAAATGGTCATCAGCATATGATGTGAGAACTATACTTCTATCAATTCAGAGTCTGCTCGGAGAACCGAACATAAGTTCACCTCTAAACACTCAGGCAGCCCAATTGTGGAGTAATCAAGAAGAATACCGGAAAATGGTGGAGAAATTGTACAAGCCTCCAACAGCAGCTTAGCTTTGTTTTTTTAGACTGACTAGGATTTGTATCTCTCTTTTTGCGCTAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAAGAGA

Coding sequence (CDS)

ATGGCGGCCATCAACCGGTACACAGACAACACAGCCCCGGCTAACCCGGTTGTTTCTCCAGCCAAGCAATCCTTGCCGCCTGCCAAAACCGCCGACTCTCAATCTGTTCTCAAGAGGTTGCAGTCTGAATTAATGGCATTAATGATGAGTGGAGACTCTGGGATCTCAGCTTTTCCCGAGGAAGATAACATTTTTTGTTGGAAAGGGACAATAACTGGAAGCAAAGAGACAGTGTTTGAAGGAACAGAGTACAGGTTATCATTTTCATTCCCTAATGATTACCCTTTTAAGCCTCCAAAGGTCAAGTTTGAGACTGGCTGCTTTCACCCAAATGTGGATGTTTATGGCAATATTTGCTTGGATATACTTCAGGATAAATGGTCATCAGCATATGATGTGAGAACTATACTTCTATCAATTCAGAGTCTGCTCGGAGAACCGAACATAAGTTCACCTCTAAACACTCAGGCAGCCCAATTGTGGAGTAATCAAGAAGAATACCGGAAAATGGTGGAGAAATTGTACAAGCCTCCAACAGCAGCTTAG

Protein sequence

MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTAA

Homology

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BLAST of IVF0003740 vs. ExPASy Swiss-Prot
Match: Q8L7T3 (Ubiquitin-conjugating enzyme E2 20 OS=Arabidopsis thaliana OX=3702 GN=UBC20 PE=2 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.3e-83
Identity = 153/180 (85.00%), Postives = 158/180 (87.78%), Query Frame = 0


Query: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAA+N Y  NT    P  + +KQ   P KT DSQSVLKRLQSELM LMM G  GISAFPE
Sbjct: 1   MAAVNGYQGNTPADPPASNGSKQPAAPTKTVDSQSVLKRLQSELMGLMMGGGPGISAFPE 60

Query: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120
           EDNIFCWKGTITGSK+TVFEGTEYRLS SF NDYPFKPPKVKFET CFHPNVDVYGNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPP+A
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPSA 180

[Close]

BLAST of IVF0003740 vs. ExPASy Swiss-Prot
Match: Q9LJZ5 (Ubiquitin-conjugating enzyme E2 19 OS=Arabidopsis thaliana OX=3702 GN=UBC19 PE=1 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 2.7e-81
Identity = 150/181 (82.87%), Postives = 156/181 (86.19%), Query Frame = 0


Query: 1   MAAINRYTDNT-APANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFP 60
           MA +N YT NT A   P  + +KQS PP KT DS SVLKRLQSELM LMM  D GISAFP
Sbjct: 1   MATVNGYTGNTPAATTPAATGSKQSAPPTKTVDSHSVLKRLQSELMGLMMGADPGISAFP 60

Query: 61  EEDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120
           EEDNIFCWKGTITGSK+TVFEGTEYRLS +F NDYPFK PKVKFET CFHPNVD+YGNIC
Sbjct: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLN QAAQLWSNQEEYRKMVEKLYKP  
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQEEYRKMVEKLYKPLN 180

[Close]

BLAST of IVF0003740 vs. ExPASy Swiss-Prot
Match: Q54XS6 (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum OX=44689 GN=ube2c PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 6.9e-53
Identity = 97/150 (64.67%), Postives = 119/150 (79.33%), Query Frame = 0


Query: 31  ADSQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTITGSKETVFEGTEYRLSFSF 90
           +   SV KRLQSELM LMM    GISAFP+ DNIF W GTI G+K+TV+E  E+++S  F
Sbjct: 2   SQDHSVSKRLQSELMNLMMGPSPGISAFPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKF 61

Query: 91  PNDYPFKPPKVKFETGCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNIS 150
           P DYP+KPP VKFET CFHPNVD  GNICLDIL+DKWS  Y+VR++L+SIQSLLGEPN  
Sbjct: 62  PTDYPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNE 121

Query: 151 SPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 181
           SPLN+ AA LWSNQ+EY+K+++K Y+  T+
Sbjct: 122 SPLNSYAASLWSNQDEYKKVLDKRYQEATS 151

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BLAST of IVF0003740 vs. ExPASy Swiss-Prot
Match: Q4R9D1 (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis OX=9541 GN=UBE2C PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.7e-51
Identity = 100/168 (59.52%), Postives = 120/168 (71.43%), Query Frame = 0


Query: 8   TDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCW 67
           + N  PA   V+ A++   P+  A    V KRLQ ELM LMMSGD GISAFPE DN+F W
Sbjct: 3   SQNRDPAATSVTAARKGAEPSGGAARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKW 62

Query: 68  KGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICLDILQDKW 127
            GTI G+  TV+E   Y+LS  FP+ YP+  P VKF T C+HPNVD  GNICLDIL+DKW
Sbjct: 63  VGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKW 122

Query: 128 SSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLY 176
           S+ YDVRTILLSIQSLLGEPNI SPLNT AA+LW N   ++K +++ Y
Sbjct: 123 SALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETY 170

[Close]

BLAST of IVF0003740 vs. ExPASy Swiss-Prot
Match: Q32PA5 (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus OX=9913 GN=UBE2C PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.9e-51
Identity = 99/168 (58.93%), Postives = 119/168 (70.83%), Query Frame = 0


Query: 8   TDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCW 67
           + N  P    V+ A++   P+  A    V KRLQ ELM LMMSGD GISAFPE DN+F W
Sbjct: 3   SQNRDPVAASVAAARKGAEPSGGAARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKW 62

Query: 68  KGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICLDILQDKW 127
            GTI G+  TV+E   Y+LS  FP+ YP+  P VKF T C+HPNVD  GNICLDIL+DKW
Sbjct: 63  VGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKW 122

Query: 128 SSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLY 176
           S+ YDVRTILLSIQSLLGEPNI SPLNT AA+LW N   ++K +++ Y
Sbjct: 123 SALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETY 170

[Close]

BLAST of IVF0003740 vs. ExPASy TrEMBL
Match: A0A5D3BA03 (Ubiquitin-conjugating enzyme E2 20-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00870 PE=3 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 6.6e-99
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE
Sbjct: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120
           EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL
Sbjct: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]

BLAST of IVF0003740 vs. ExPASy TrEMBL
Match: A0A0A0KF07 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G434330 PE=3 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 6.6e-99
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE
Sbjct: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120
           EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL
Sbjct: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]

BLAST of IVF0003740 vs. ExPASy TrEMBL
Match: A0A1S3BLY8 (ubiquitin-conjugating enzyme E2 20 OS=Cucumis melo OX=3656 GN=LOC103491487 PE=3 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 6.6e-99
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE
Sbjct: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120
           EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL
Sbjct: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]

BLAST of IVF0003740 vs. ExPASy TrEMBL
Match: A0A6J1H1C8 (ubiquitin-conjugating enzyme E2 20-like OS=Cucurbita moschata OX=3662 GN=LOC111459191 PE=3 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 3.6e-97
Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAINRYTDNT PANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE
Sbjct: 1   MAAINRYTDNTTPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120
           EDNIFCWKGTITGSK+TVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPN SSPLNTQAAQLWSNQE+YRKMVEKLYKPPTA
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPTA 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]

BLAST of IVF0003740 vs. ExPASy TrEMBL
Match: A0A6J1K3C1 (ubiquitin-conjugating enzyme E2 20-like OS=Cucurbita maxima OX=3661 GN=LOC111490778 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.0e-96
Identity = 174/181 (96.13%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAINRYTDNT P+NPVVSPAKQSLPPAK ADSQSVLKRLQSELMALMMSGDSGISAFPE
Sbjct: 1   MAAINRYTDNTTPSNPVVSPAKQSLPPAKAADSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120
           EDNIFCWKGTITGSK+TVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVD+YGNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPN SSPLNTQAAQLWSNQE+YRKMVEKLYKPPTA
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPTA 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]

BLAST of IVF0003740 vs. NCBI nr
Match: XP_004140207.1 (ubiquitin-conjugating enzyme E2 20 [Cucumis sativus] >XP_008449688.1 PREDICTED: ubiquitin-conjugating enzyme E2 20 [Cucumis melo] >KAA0061782.1 ubiquitin-conjugating enzyme E2 20-like isoform X3 [Cucumis melo var. makuwa] >KGN48113.1 hypothetical protein Csa_003824 [Cucumis sativus] >TYJ96123.1 ubiquitin-conjugating enzyme E2 20-like isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 372 bits (955), Expect = 4.10e-130
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE
Sbjct: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120
           EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL
Sbjct: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180

[Close]

BLAST of IVF0003740 vs. NCBI nr
Match: XP_038900928.1 (LOW QUALITY PROTEIN: ubiquitin-conjugating enzyme E2 20 [Benincasa hispida])

HSP 1 Score: 370 bits (951), Expect = 1.67e-129
Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAINRYTDNT PANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE
Sbjct: 1   MAAINRYTDNTTPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120
           EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL
Sbjct: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180

[Close]

BLAST of IVF0003740 vs. NCBI nr
Match: XP_022957735.1 (ubiquitin-conjugating enzyme E2 20-like [Cucurbita moschata] >KAG6605929.1 Ubiquitin-conjugating enzyme E2 19, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035878.1 Ubiquitin-conjugating enzyme E2 19, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 366 bits (940), Expect = 8.24e-128
Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAINRYTDNT PANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE
Sbjct: 1   MAAINRYTDNTTPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120
           EDNIFCWKGTITGSK+TVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPN SSPLNTQAAQLWSNQE+YRKMVEKLYKPPTA
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPTA 180

[Close]

BLAST of IVF0003740 vs. NCBI nr
Match: XP_023533942.1 (ubiquitin-conjugating enzyme E2 20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 366 bits (939), Expect = 1.17e-127
Identity = 176/181 (97.24%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAINRYTDNT PANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE
Sbjct: 1   MAAINRYTDNTTPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120
           EDNIFCWKGTITGSK+TVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVD+YGNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPN SSPLNTQAAQLWSNQE+YRKMVEKLYKPPTA
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPTA 180

[Close]

BLAST of IVF0003740 vs. NCBI nr
Match: XP_022995155.1 (ubiquitin-conjugating enzyme E2 20-like [Cucurbita maxima])

HSP 1 Score: 363 bits (931), Expect = 1.94e-126
Identity = 174/181 (96.13%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAINRYTDNT P+NPVVSPAKQSLPPAK ADSQSVLKRLQSELMALMMSGDSGISAFPE
Sbjct: 1   MAAINRYTDNTTPSNPVVSPAKQSLPPAKAADSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120
           EDNIFCWKGTITGSK+TVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVD+YGNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPN SSPLNTQAAQLWSNQE+YRKMVEKLYKPPTA
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPTA 180

[Close]

BLAST of IVF0003740 vs. TAIR 10
Match: AT1G50490.1 (ubiquitin-conjugating enzyme 20 )

HSP 1 Score: 310.5 bits (794), Expect = 9.2e-85
Identity = 153/180 (85.00%), Postives = 158/180 (87.78%), Query Frame = 0


Query: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAA+N Y  NT    P  + +KQ   P KT DSQSVLKRLQSELM LMM G  GISAFPE
Sbjct: 1   MAAVNGYQGNTPADPPASNGSKQPAAPTKTVDSQSVLKRLQSELMGLMMGGGPGISAFPE 60

Query: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120
           EDNIFCWKGTITGSK+TVFEGTEYRLS SF NDYPFKPPKVKFET CFHPNVDVYGNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPP+A
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPSA 180

[Close]

BLAST of IVF0003740 vs. TAIR 10
Match: AT3G20060.1 (ubiquitin-conjugating enzyme19 )

HSP 1 Score: 302.8 bits (774), Expect = 1.9e-82
Identity = 150/181 (82.87%), Postives = 156/181 (86.19%), Query Frame = 0


Query: 1   MAAINRYTDNT-APANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFP 60
           MA +N YT NT A   P  + +KQS PP KT DS SVLKRLQSELM LMM  D GISAFP
Sbjct: 1   MATVNGYTGNTPAATTPAATGSKQSAPPTKTVDSHSVLKRLQSELMGLMMGADPGISAFP 60

Query: 61  EEDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120
           EEDNIFCWKGTITGSK+TVFEGTEYRLS +F NDYPFK PKVKFET CFHPNVD+YGNIC
Sbjct: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLN QAAQLWSNQEEYRKMVEKLYKP  
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQEEYRKMVEKLYKPLN 180

[Close]

BLAST of IVF0003740 vs. TAIR 10
Match: AT3G20060.2 (ubiquitin-conjugating enzyme19 )

HSP 1 Score: 257.3 bits (656), Expect = 9.2e-69
Identity = 122/136 (89.71%), Postives = 125/136 (91.91%), Query Frame = 0


Query: 45  MALMMSGDSGISAFPEEDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFE 104
           M LMM  D GISAFPEEDNIFCWKGTITGSK+TVFEGTEYRLS +F NDYPFK PKVKFE
Sbjct: 1   MGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFE 60

Query: 105 TGCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQ 164
           T CFHPNVD+YGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLN QAAQLWSNQ
Sbjct: 61  TCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQ 120

Query: 165 EEYRKMVEKLYKPPTA 181
           EEYRKMVEKLYKP  A
Sbjct: 121 EEYRKMVEKLYKPLNA 136

[Close]

BLAST of IVF0003740 vs. TAIR 10
Match: AT2G02760.1 (ubiquiting-conjugating enzyme 2 )

HSP 1 Score: 129.4 bits (324), Expect = 2.9e-30
Identity = 62/138 (44.93%), Postives = 90/138 (65.22%), Query Frame = 0


Query: 38  KRLQSELMALMMSGDSGISAFPEEDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFK 97
           KRL  +   L     +GIS  P+++NI  W   I G  +T ++G  ++LS  F  DYP K
Sbjct: 7   KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66

Query: 98  PPKVKFETGCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQA 157
           PP V+F +  FHPN+   G+ICLDILQ++WS  YDV  IL SIQSLL +PN +SP N++A
Sbjct: 67  PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126

Query: 158 AQLWS-NQEEYRKMVEKL 175
           A+++S ++ EY + V ++
Sbjct: 127 ARMFSESKREYNRRVREV 144

[Close]

BLAST of IVF0003740 vs. TAIR 10
Match: AT1G14400.1 (ubiquitin carrier protein 1 )

HSP 1 Score: 129.0 bits (323), Expect = 3.8e-30
Identity = 62/135 (45.93%), Postives = 88/135 (65.19%), Query Frame = 0


Query: 38  KRLQSELMALMMSGDSGISAFPEEDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFK 97
           KRL  +   L     +GIS  P+++NI  W   I G  +T ++G  ++LS  F  DYP K
Sbjct: 7   KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66

Query: 98  PPKVKFETGCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQA 157
           PP V+F +  FHPN+   G+ICLDILQ++WS  YDV  IL SIQSLL +PN +SP N++A
Sbjct: 67  PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126

Query: 158 AQLWS-NQEEYRKMV 172
           A+++S ++ EY + V
Sbjct: 127 ARMYSESKREYNRRV 141

The following BLAST results are available for this feature:

BLAST of IVF0003740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7T3	1.3e-83	85.00	Ubiquitin-conjugating enzyme E2 20 OS=Arabidopsis thaliana OX=3702 GN=UBC20 PE=2...	[more]
Q9LJZ5	2.7e-81	82.87	Ubiquitin-conjugating enzyme E2 19 OS=Arabidopsis thaliana OX=3702 GN=UBC19 PE=1...	[more]
Q54XS6	6.9e-53	64.67	Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum OX=44689 ...	[more]
Q4R9D1	1.7e-51	59.52	Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis OX=9541 GN=UBE2C PE=2 S...	[more]
Q32PA5	4.9e-51	58.93	Ubiquitin-conjugating enzyme E2 C OS=Bos taurus OX=9913 GN=UBE2C PE=2 SV=1	[more]

BLAST of IVF0003740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BA03	6.6e-99	100.00	Ubiquitin-conjugating enzyme E2 20-like isoform X3 OS=Cucumis melo var. makuwa O...	[more]
A0A0A0KF07	6.6e-99	100.00	UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G434330 PE...	[more]
A0A1S3BLY8	6.6e-99	100.00	ubiquitin-conjugating enzyme E2 20 OS=Cucumis melo OX=3656 GN=LOC103491487 PE=3 ...	[more]
A0A6J1H1C8	3.6e-97	97.79	ubiquitin-conjugating enzyme E2 20-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1K3C1	4.0e-96	96.13	ubiquitin-conjugating enzyme E2 20-like OS=Cucurbita maxima OX=3661 GN=LOC111490...	[more]

BLAST of IVF0003740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140207.1	4.10e-130	100.00	ubiquitin-conjugating enzyme E2 20 [Cucumis sativus] >XP_008449688.1 PREDICTED: ...	[more]
XP_038900928.1	1.67e-129	99.45	LOW QUALITY PROTEIN: ubiquitin-conjugating enzyme E2 20 [Benincasa hispida]	[more]
XP_022957735.1	8.24e-128	97.79	ubiquitin-conjugating enzyme E2 20-like [Cucurbita moschata] >KAG6605929.1 Ubiqu...	[more]
XP_023533942.1	1.17e-127	97.24	ubiquitin-conjugating enzyme E2 20-like [Cucurbita pepo subsp. pepo]	[more]
XP_022995155.1	1.94e-126	96.13	ubiquitin-conjugating enzyme E2 20-like [Cucurbita maxima]	[more]

BLAST of IVF0003740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50490.1	9.2e-85	85.00	ubiquitin-conjugating enzyme 20	[more]
AT3G20060.1	1.9e-82	82.87	ubiquitin-conjugating enzyme19	[more]
AT3G20060.2	9.2e-69	89.71	ubiquitin-conjugating enzyme19	[more]
AT2G02760.1	2.9e-30	44.93	ubiquiting-conjugating enzyme 2	[more]
AT1G14400.1	3.8e-30	45.93	ubiquitin carrier protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 38..180 e-value: 2.0E-59 score: 213.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR24068:SF373	BNAC06G03670D PROTEIN	coord: 18..178
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 18..178
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 39..173 e-value: 5.1E-47 score: 159.0
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 35..180 score: 48.205151
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 38..175 e-value: 7.16541E-64 score: 191.262
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 28..177 e-value: 2.5E-57 score: 194.8
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 28..174
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 108..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0003740.1	IVF0003740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031145	anaphase-promoting complex-dependent catabolic process
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0030071	regulation of mitotic metaphase/anaphase transition
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity