IVF0003726 (gene) Melon (IVF77) v1

Overview


Name	IVF0003726
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	dehydration-responsive element-binding protein 1F-like
Location	chr04: 30083234 .. 30083865 (+)
RNA-Seq Expression	IVF0003726
Synteny	IVF0003726

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCCACAAATTTTCTCAACTTAATGCCTTCCTCGTCTTCCAGCTCAACCAACGACCACCTTCCGCCGCCCACCACGGTGGCCAAGCGAAAGGCCGGTCGGAAAAAATTTCAAGAGACCCGCCACCCGATTTACAAAGGCGTTCGCCAAAGGAATGGTAAATGGGTTTGCGAGCTTCGACAACCTAACAAAAAATCTAGCTTTTGGGTTGGAACTTTTTGTAGCCCGAAAACCGCCGCAATTGCATACGACGTAGTTGCCTTGGCCATTAAAGGTGAGTCCGTATCACTCAATTTCCCCAACTTCGCTCACTCATTTCCACGAGTTATGTCCTCGTCTTCTTCCATAAACGATATTCGCGCGATGGCGATTAAGACGGCAGAGACATTTACGTCAAGCGACATAATGATGCCTTTGTCGTCTCCATCGTCACCCTCATCGTTGTGTTCTTTAATGTCAGAGGAGAAGGTAGTACCAAATTATTTTTGGGACGAGGAGGAGGTGTTTAACATGCCTGCGATAATTGCGGGTATTGCAGAGGGTTTGATTATAACACCACCGGGAATGAAGAGGGAATTCGATTGGGAGGATTCTGAGAACACGATGGAATTGTCGTTATGGAGTCATGAGTGA

mRNA sequence

CATCCACAAATTTTCTCAACTTAATGCCTTCCTCGTCTTCCAGCTCAACCAACGACCACCTTCCGCCGCCCACCACGGTGGCCAAGCGAAAGGCCGGTCGGAAAAAATTTCAAGAGACCCGCCACCCGATTTACAAAGGCGTTCGCCAAAGGAATGGTAAATGGGTTTGCGAGCTTCGACAACCTAACAAAAAATCTAGCTTTTGGGTTGGAACTTTTTGTAGCCCGAAAACCGCCGCAATTGCATACGACGTAGTTGCCTTGGCCATTAAAGGTGAGTCCGTATCACTCAATTTCCCCAACTTCGCTCACTCATTTCCACGAGTTATGTCCTCGTCTTCTTCCATAAACGATATTCGCGCGATGGCGATTAAGACGGCAGAGACATTTACGTCAAGCGACATAATGATGCCTTTGTCGTCTCCATCGTCACCCTCATCGTTGTGTTCTTTAATGTCAGAGGAGAAGGTAGTACCAAATTATTTTTGGGACGAGGAGGAGGTGTTTAACATGCCTGCGATAATTGCGGGTATTGCAGAGGGTTTGATTATAACACCACCGGGAATGAAGAGGGAATTCGATTGGGAGGATTCTGAGAACACGATGGAATTGTCGTTATGGAGTCATGAGTGA

Coding sequence (CDS)

ATGCCTTCCTCGTCTTCCAGCTCAACCAACGACCACCTTCCGCCGCCCACCACGGTGGCCAAGCGAAAGGCCGGTCGGAAAAAATTTCAAGAGACCCGCCACCCGATTTACAAAGGCGTTCGCCAAAGGAATGGTAAATGGGTTTGCGAGCTTCGACAACCTAACAAAAAATCTAGCTTTTGGGTTGGAACTTTTTGTAGCCCGAAAACCGCCGCAATTGCATACGACGTAGTTGCCTTGGCCATTAAAGGTGAGTCCGTATCACTCAATTTCCCCAACTTCGCTCACTCATTTCCACGAGTTATGTCCTCGTCTTCTTCCATAAACGATATTCGCGCGATGGCGATTAAGACGGCAGAGACATTTACGTCAAGCGACATAATGATGCCTTTGTCGTCTCCATCGTCACCCTCATCGTTGTGTTCTTTAATGTCAGAGGAGAAGGTAGTACCAAATTATTTTTGGGACGAGGAGGAGGTGTTTAACATGCCTGCGATAATTGCGGGTATTGCAGAGGGTTTGATTATAACACCACCGGGAATGAAGAGGGAATTCGATTGGGAGGATTCTGAGAACACGATGGAATTGTCGTTATGGAGTCATGAGTGA

Protein sequence

MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSFWVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAETFTSSDIMMPLSSPSSPSSLCSLMSEEKVVPNYFWDEEEVFNMPAIIAGIAEGLIITPPGMKREFDWEDSENTMELSLWSHE

Homology

[Close]

BLAST of IVF0003726 vs. ExPASy Swiss-Prot
Match: P93835 (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=DREB1B PE=1 SV=2)

HSP 1 Score: 129.4 bits (324), Expect = 4.5e-29
Identity = 76/191 (39.79%), Postives = 114/191 (59.69%), Query Frame = 0


Query: 17  TTVAKRKAGRKKFQETRHPIYKGVRQRN-GKWVCELRQPNKKSSFWVGTFCSPKTAAIAY 76
           T+  K+ AGRKKF+ETRHPIY+GVRQRN GKWV E+R+PNKK+  W+GTF + + AA A+
Sbjct: 28  TSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAH 87

Query: 77  DVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAETFTSSDIMMPLSSPS 136
           DV ALA++G S  LNF + A      +  S+   DI+  A + A  F   D     ++ +
Sbjct: 88  DVAALALRGRSACLNFADSAWRLR--IPESTCAKDIQKAAAEAALAF--QDETCDTTTTN 147

Query: 137 SPSSLCSLMSEEKVVPN-----YFWDEEEVFNMPAIIAGIAEGLIITPPGMKREFDWEDS 196
               +   M E    P      ++ DEE +F MP ++  +AEG+++ PP ++   ++ D 
Sbjct: 148 HGLDMEETMVEAIYTPEQSEGAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHNY-DG 207

Query: 197 ENTMELSLWSH 202
           E   ++SLWS+
Sbjct: 208 EGDGDVSLWSY 213

[Close]

BLAST of IVF0003726 vs. ExPASy Swiss-Prot
Match: A2WZI4 (Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. indica OX=39946 GN=DREB1F PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.5e-29
Identity = 81/210 (38.57%), Postives = 118/210 (56.19%), Query Frame = 0


Query: 2   PSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNG--KWVCELRQPNKKSS 61
           PSS     +  LPP     KR+AGRKKF+ETRHP+Y+GVR R G  +WVCE+R+P  ++ 
Sbjct: 17  PSSPGGGHHHRLPP-----KRRAGRKKFRETRHPVYRGVRARAGGSRWVCEVREPQAQAR 76

Query: 62  FWVGTFCSPKTAAIAYDVVALAIKGE-SVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKT 121
            W+GT+ +P+ AA A+DV A+A++GE    LNFP+   + PR  ++S    DIR  A + 
Sbjct: 77  IWLGTYPTPEMAARAHDVAAIALRGERGAELNFPDSPSTLPRARTASP--EDIRLAAAQA 136

Query: 122 AETFTSSDIMMPLSSPSSPSSLCS---LMSEEKVVPNYFWDEEEVFNMPAIIAGIAEGLI 181
           AE +       PL+ P  P    S     +        F DE+ +F+MP +I  +A G++
Sbjct: 137 AELYRRPP--PPLALPEDPQEGTSGGGATATSGRPAAVFVDEDAIFDMPGLIDDMARGMM 196

Query: 182 ITPPGMKREF-DW-----EDSENTMELSLW 200
           +TPP + R   DW     +D    M+  LW
Sbjct: 197 LTPPAIGRSLDDWAAIDDDDDHYHMDYKLW 217

[Close]

BLAST of IVF0003726 vs. ExPASy Swiss-Prot
Match: Q8S9Z5 (Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. japonica OX=39947 GN=DREB1F PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.5e-29
Identity = 81/210 (38.57%), Postives = 118/210 (56.19%), Query Frame = 0


Query: 2   PSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNG--KWVCELRQPNKKSS 61
           PSS     +  LPP     KR+AGRKKF+ETRHP+Y+GVR R G  +WVCE+R+P  ++ 
Sbjct: 17  PSSPGGGHHHRLPP-----KRRAGRKKFRETRHPVYRGVRARAGGSRWVCEVREPQAQAR 76

Query: 62  FWVGTFCSPKTAAIAYDVVALAIKGE-SVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKT 121
            W+GT+ +P+ AA A+DV A+A++GE    LNFP+   + PR  ++S    DIR  A + 
Sbjct: 77  IWLGTYPTPEMAARAHDVAAIALRGERGAELNFPDSPSTLPRARTASP--EDIRLAAAQA 136

Query: 122 AETFTSSDIMMPLSSPSSPSSLCS---LMSEEKVVPNYFWDEEEVFNMPAIIAGIAEGLI 181
           AE +       PL+ P  P    S     +        F DE+ +F+MP +I  +A G++
Sbjct: 137 AELYRRPP--PPLALPEDPQEGTSGGGATATSGRPAAVFVDEDAIFDMPGLIDDMARGMM 196

Query: 182 ITPPGMKREF-DW-----EDSENTMELSLW 200
           +TPP + R   DW     +D    M+  LW
Sbjct: 197 LTPPAIGRSLDDWAAIDDDDDHYHMDYKLW 217

[Close]

BLAST of IVF0003726 vs. ExPASy Swiss-Prot
Match: Q9M0L0 (Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=DREB1A PE=1 SV=2)

HSP 1 Score: 127.5 bits (319), Expect = 1.7e-28
Identity = 76/202 (37.62%), Postives = 122/202 (60.40%), Query Frame = 0


Query: 4   SSSSSTNDHLPP-PTTVAKRKAGRKKFQETRHPIYKGVRQRN-GKWVCELRQPNKKSSFW 63
           SS SS  D++P   ++  K+ AGRKKF+ETRHPIY+GVR+RN GKWVCE+R+PNKK+  W
Sbjct: 17  SSVSSGGDYIPTLASSCPKKPAGRKKFRETRHPIYRGVRRRNSGKWVCEVREPNKKTRIW 76

Query: 64  VGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAET 123
           +GTF + + AA A+DV ALA++G S  LNF + A      +  S+   DI+  A + A  
Sbjct: 77  LGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLR--IPESTCAKDIQKAAAEAALA 136

Query: 124 FTSS--DIMMPLSSPSSPSSLCSLMSEEKVVPNYFWDEEEVFNMPAIIAGIAEGLIITPP 183
           F     D           + + ++ + E+    ++  +E +F MP+++A +AEG+++  P
Sbjct: 137 FQDEMCDATTDHGFDMEETLVEAIYTAEQSENAFYMHDEAMFEMPSLLANMAEGMLLPLP 196

Query: 184 GMKREFDWEDSENTMELSLWSH 202
            ++   + E   +  ++SLWS+
Sbjct: 197 SVQWNHNHEVDGDDDDVSLWSY 216

[Close]

BLAST of IVF0003726 vs. ExPASy Swiss-Prot
Match: Q9SYS6 (Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=DREB1C PE=1 SV=2)

HSP 1 Score: 125.9 bits (315), Expect = 5.0e-28
Identity = 78/205 (38.05%), Postives = 122/205 (59.51%), Query Frame = 0


Query: 4   SSSSSTNDHLPP-PTTVAKRKAGRKKFQETRHPIYKGVRQRN-GKWVCELRQPNKKSSFW 63
           S  SS  D+ P   T+  K+ AGRKKF+ETRHPIY+GVRQRN GKWVCELR+PNKK+  W
Sbjct: 17  SPVSSGGDYSPKLATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVCELREPNKKTRIW 76

Query: 64  VGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAET 123
           +GTF + + AA A+DV A+A++G S  LNF + A      +  S+   +I+  A + A  
Sbjct: 77  LGTFQTAEMAARAHDVAAIALRGRSACLNFADSAWRLR--IPESTCAKEIQKAAAEAALN 136

Query: 124 FTSSDIMMPLSSPSSPSSLCSLMSEEKVVPN-----YFWDEEEVFNMPAIIAGIAEGLII 183
           F   D M  +++ +    +   + E    P      ++ DEE +  M +++  +AEG+++
Sbjct: 137 F--QDEMCHMTTDAHGLDMEETLVEAIYTPEQSQDAFYMDEEAMLGMSSLLDNMAEGMLL 196

Query: 184 TPPGMKREFDWEDSENTMELSLWSH 202
             P ++  +++ D E   ++SLWS+
Sbjct: 197 PSPSVQWNYNF-DVEGDDDVSLWSY 216

[Close]

BLAST of IVF0003726 vs. ExPASy TrEMBL
Match: A0A5D3DNN2 (Dehydration-responsive element-binding protein 1F-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003570 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 2.7e-109
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSF 60
           MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSF
Sbjct: 1   MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSF 60

Query: 61  WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE 120
           WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE
Sbjct: 61  WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE 120

Query: 121 TFTSSDIMMPLSSPSSPSSLCSLMSEEKVVPNYFWDEEEVFNMPAIIAGIAEGLIITPPG 180
           TFTSSDIMMPLSSPSSPSSLCSLMSEEKVVPNYFWDEEEVFNMPAIIAGIAEGLIITPPG
Sbjct: 121 TFTSSDIMMPLSSPSSPSSLCSLMSEEKVVPNYFWDEEEVFNMPAIIAGIAEGLIITPPG 180

Query: 181 MKREFDWEDSENTMELSLWSHE 203
           MKREFDWEDSENTMELSLWSHE
Sbjct: 181 MKREFDWEDSENTMELSLWSHE 202

[Close]

BLAST of IVF0003726 vs. ExPASy TrEMBL
Match: A0A1S3B6L0 (dehydration-responsive element-binding protein 1F-like OS=Cucumis melo OX=3656 GN=LOC103486580 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 2.7e-109
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSF 60
           MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSF
Sbjct: 1   MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSF 60

Query: 61  WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE 120
           WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE
Sbjct: 61  WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE 120

Query: 121 TFTSSDIMMPLSSPSSPSSLCSLMSEEKVVPNYFWDEEEVFNMPAIIAGIAEGLIITPPG 180
           TFTSSDIMMPLSSPSSPSSLCSLMSEEKVVPNYFWDEEEVFNMPAIIAGIAEGLIITPPG
Sbjct: 121 TFTSSDIMMPLSSPSSPSSLCSLMSEEKVVPNYFWDEEEVFNMPAIIAGIAEGLIITPPG 180

Query: 181 MKREFDWEDSENTMELSLWSHE 203
           MKREFDWEDSENTMELSLWSHE
Sbjct: 181 MKREFDWEDSENTMELSLWSHE 202

[Close]

BLAST of IVF0003726 vs. ExPASy TrEMBL
Match: I3WEU3 (CBF3 protein OS=Cucumis sativus OX=3659 GN=CBF3 PE=2 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.4e-97
Identity = 189/205 (92.20%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSF 60
           M SSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELR+PNKKSSF
Sbjct: 1   MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF 60

Query: 61  WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE 120
           WVGTFCSPK AAIAYDVVALAIKGESV LNFPNFAHSFPRVMSSSSSI+DIRAMAIKTAE
Sbjct: 61  WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 120

Query: 121 TFTSSDIMMP--LSSPSSPSSLCSLMSEEKVV-PNYFWDEEEVFNMPAIIAGIAEGLIIT 180
           TFTS DI+ P  LSSPSS  SLCSLMSEEKVV PNYFWDEEEVFNMPAIIAG+AEGLIIT
Sbjct: 121 TFTSGDILTPLSLSSPSS-LSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIIT 180

Query: 181 PPGMKREFDWEDSENTMELSLWSHE 203
           PPGMK+EFDWEDSENT+ELSLWSHE
Sbjct: 181 PPGMKKEFDWEDSENTIELSLWSHE 204

[Close]

BLAST of IVF0003726 vs. ExPASy TrEMBL
Match: A0A140DCV7 (CRT/DRE-binding factor 3 OS=Cucumis melo OX=3656 PE=2 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.4e-97
Identity = 189/205 (92.20%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSF 60
           M SSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELR+PNKKSSF
Sbjct: 1   MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF 60

Query: 61  WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE 120
           WVGTFCSPK AAIAYDVVALAIKGESV LNFPNFAHSFPRVMSSSSSI+DIRAMAIKTAE
Sbjct: 61  WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 120

Query: 121 TFTSSDIMMP--LSSPSSPSSLCSLMSEEKVV-PNYFWDEEEVFNMPAIIAGIAEGLIIT 180
           TFTS DI+ P  LSSPSS  SLCSLMSEEKVV PNYFWDEEEVFNMPAIIAG+AEGLIIT
Sbjct: 121 TFTSGDILTPLSLSSPSS-LSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIIT 180

Query: 181 PPGMKREFDWEDSENTMELSLWSHE 203
           PPGMK+EFDWEDSENT+ELSLWSHE
Sbjct: 181 PPGMKKEFDWEDSENTIELSLWSHE 204

[Close]

BLAST of IVF0003726 vs. ExPASy TrEMBL
Match: A0A6J1F3A6 (dehydration-responsive element-binding protein 1B-like OS=Cucurbita moschata OX=3662 GN=LOC111441748 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.5e-72
Identity = 151/210 (71.90%), Postives = 170/210 (80.95%), Query Frame = 0


Query: 1   MPSSSSSSTNDHLPP--PTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKS 60
           MPSSSSSSTN+HLPP   T   KRKAGRKKFQETRHPIYKGVRQRNGKWV ELR PNK S
Sbjct: 1   MPSSSSSSTNEHLPPSQKTASTKRKAGRKKFQETRHPIYKGVRQRNGKWVSELRWPNKNS 60

Query: 61  SFWVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKT 120
           +FWVGTFC+P+ AA+AYDVVAL IKGES  LNFPN+ H FPRV SSSSSINDIR MA++ 
Sbjct: 61  TFWVGTFCTPEMAAVAYDVVALTIKGESAPLNFPNWTHLFPRVKSSSSSINDIRTMAVEA 120

Query: 121 AETFTSSDIMMPLSSPSSPSSLC-SLMSEEKVVP-----NYFWDEEEVFNMPAIIAGIAE 180
           AE FTSS+ +  LSS    SSLC SL SEEKV+P         DEEEVFNMPAIIAG+AE
Sbjct: 121 AEAFTSSNRLSSLSS----SSLCSSLTSEEKVIPAVLTDRLVLDEEEVFNMPAIIAGMAE 180

Query: 181 GLIITPPGMKREFDWEDSENTMELSLWSHE 203
           GLI+TPPGMKR F+WE+ E+T+ELSLW+ +
Sbjct: 181 GLILTPPGMKRGFNWEEYEDTVELSLWNDD 206

[Close]

BLAST of IVF0003726 vs. NCBI nr
Match: XP_008442807.1 (PREDICTED: dehydration-responsive element-binding protein 1F-like [Cucumis melo] >KAA0043910.1 dehydration-responsive element-binding protein 1F-like [Cucumis melo var. makuwa] >TYK25227.1 dehydration-responsive element-binding protein 1F-like [Cucumis melo var. makuwa])

HSP 1 Score: 402 bits (1034), Expect = 1.83e-141
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSF 60
           MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSF
Sbjct: 1   MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSF 60

Query: 61  WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE 120
           WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE
Sbjct: 61  WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE 120

Query: 121 TFTSSDIMMPLSSPSSPSSLCSLMSEEKVVPNYFWDEEEVFNMPAIIAGIAEGLIITPPG 180
           TFTSSDIMMPLSSPSSPSSLCSLMSEEKVVPNYFWDEEEVFNMPAIIAGIAEGLIITPPG
Sbjct: 121 TFTSSDIMMPLSSPSSPSSLCSLMSEEKVVPNYFWDEEEVFNMPAIIAGIAEGLIITPPG 180

Query: 181 MKREFDWEDSENTMELSLWSHE 202
           MKREFDWEDSENTMELSLWSHE
Sbjct: 181 MKREFDWEDSENTMELSLWSHE 202

[Close]

BLAST of IVF0003726 vs. NCBI nr
Match: NP_001267604.1 (dehydration-responsive element-binding protein 1A-like [Cucumis sativus] >AFL03400.1 CBF3 protein [Cucumis sativus] >AMK37722.1 CRT/DRE-binding factor 3 [Cucumis melo])

HSP 1 Score: 363 bits (933), Expect = 4.93e-126
Identity = 189/205 (92.20%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSF 60
           M SSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELR+PNKKSSF
Sbjct: 1   MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF 60

Query: 61  WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE 120
           WVGTFCSPK AAIAYDVVALAIKGESV LNFPNFAHSFPRVMSSSSSI+DIRAMAIKTAE
Sbjct: 61  WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 120

Query: 121 TFTSSDIMMPLSSPSSPSSL--CSLMSEEKVV-PNYFWDEEEVFNMPAIIAGIAEGLIIT 180
           TFTS DI+ PLS  SSPSSL  CSLMSEEKVV PNYFWDEEEVFNMPAIIAG+AEGLIIT
Sbjct: 121 TFTSGDILTPLSL-SSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIIT 180

Query: 181 PPGMKREFDWEDSENTMELSLWSHE 202
           PPGMK+EFDWEDSENT+ELSLWSHE
Sbjct: 181 PPGMKKEFDWEDSENTIELSLWSHE 204

[Close]

BLAST of IVF0003726 vs. NCBI nr
Match: KAE8651078.1 (hypothetical protein Csa_001557 [Cucumis sativus])

HSP 1 Score: 363 bits (933), Expect = 1.00e-125
Identity = 189/205 (92.20%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSF 60
           M SSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELR+PNKKSSF
Sbjct: 21  MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF 80

Query: 61  WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE 120
           WVGTFCSPK AAIAYDVVALAIKGESV LNFPNFAHSFPRVMSSSSSI+DIRAMAIKTAE
Sbjct: 81  WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 140

Query: 121 TFTSSDIMMPLSSPSSPSSL--CSLMSEEKVV-PNYFWDEEEVFNMPAIIAGIAEGLIIT 180
           TFTS DI+ PLS  SSPSSL  CSLMSEEKVV PNYFWDEEEVFNMPAIIAG+AEGLIIT
Sbjct: 141 TFTSGDILTPLSL-SSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIIT 200

Query: 181 PPGMKREFDWEDSENTMELSLWSHE 202
           PPGMK+EFDWEDSENT+ELSLWSHE
Sbjct: 201 PPGMKKEFDWEDSENTIELSLWSHE 224

[Close]

BLAST of IVF0003726 vs. NCBI nr
Match: XP_038906080.1 (dehydration-responsive element-binding protein 1B-like [Benincasa hispida])

HSP 1 Score: 312 bits (799), Expect = 1.24e-105
Identity = 160/205 (78.05%), Postives = 181/205 (88.29%), Query Frame = 0


Query: 1   MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSF 60
           M SSSSSSTNDHL PP  V KR+AGR+KFQETRHPI+KGVRQRNGKWV ELR+PNKKSS 
Sbjct: 1   MSSSSSSSTNDHLSPPAVV-KRRAGRQKFQETRHPIFKGVRQRNGKWVSELRRPNKKSSL 60

Query: 61  WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE 120
           WVGTFC+PKTAA+AYDVVALAIKGES SLNFPN A+SFPRVMSSS+ I+DIR MAI+TA+
Sbjct: 61  WVGTFCNPKTAAVAYDVVALAIKGESASLNFPNLAYSFPRVMSSST-IHDIRTMAIETAK 120

Query: 121 TFTSSDIMM---PLSSPSSPSSLCSLMSEEKVVPNYFWDEEEVFNMPAIIAGIAEGLIIT 180
            FTSSDI+    PLS PSS S LCSL ++EKVVPN+FWDE+EVFNMPAIIAG+AEGLI+T
Sbjct: 121 AFTSSDILTSLSPLSPPSSQSLLCSLTADEKVVPNFFWDEDEVFNMPAIIAGMAEGLILT 180

Query: 181 PPGMKREFDWEDSENTMELSLWSHE 202
           PP +K EFDWED EN +EL+LWSHE
Sbjct: 181 PPKIKSEFDWEDCENIIELTLWSHE 203

[Close]

BLAST of IVF0003726 vs. NCBI nr
Match: KAG6580677.1 (Dehydration-responsive element-binding protein 1B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 282 bits (722), Expect = 7.30e-94
Identity = 151/210 (71.90%), Postives = 170/210 (80.95%), Query Frame = 0


Query: 1   MPSSSSSSTNDHLPPP--TTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKS 60
           MPSSSSSSTN+HLPP   T   KRKAGRKKFQETRHPIYKGVRQRNGKWV ELR PNK S
Sbjct: 1   MPSSSSSSTNEHLPPSQKTASTKRKAGRKKFQETRHPIYKGVRQRNGKWVSELRWPNKNS 60

Query: 61  SFWVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKT 120
           +FWVGTFC+P+ AA+AYDVVAL IKGES  LNFPN+ H FPRV SSSSSINDIR MA++ 
Sbjct: 61  TFWVGTFCTPEMAAVAYDVVALTIKGESAPLNFPNWTHLFPRVTSSSSSINDIRTMAVEA 120

Query: 121 AETFTSSDIMMPLSSPSSPSSLCS-LMSEEKVVPNYFWD-----EEEVFNMPAIIAGIAE 180
           AE FTSS+ +  LSS    SSLCS LMSEE V+P    D     EEEVFNMPAIIA +AE
Sbjct: 121 AEAFTSSNRLSSLSS----SSLCSSLMSEEMVIPEVLTDRLVLDEEEVFNMPAIIASMAE 180

Query: 181 GLIITPPGMKREFDWEDSENTMELSLWSHE 202
           GLI+TPPGMKR F+WE+ E+T+ELSLW+H+
Sbjct: 181 GLILTPPGMKRGFNWEEYEDTVELSLWNHD 206

[Close]

BLAST of IVF0003726 vs. TAIR 10
Match: AT4G25490.1 (C-repeat/DRE binding factor 1 )

HSP 1 Score: 129.4 bits (324), Expect = 3.2e-30
Identity = 76/191 (39.79%), Postives = 114/191 (59.69%), Query Frame = 0


Query: 17  TTVAKRKAGRKKFQETRHPIYKGVRQRN-GKWVCELRQPNKKSSFWVGTFCSPKTAAIAY 76
           T+  K+ AGRKKF+ETRHPIY+GVRQRN GKWV E+R+PNKK+  W+GTF + + AA A+
Sbjct: 28  TSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAH 87

Query: 77  DVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAETFTSSDIMMPLSSPS 136
           DV ALA++G S  LNF + A      +  S+   DI+  A + A  F   D     ++ +
Sbjct: 88  DVAALALRGRSACLNFADSAWRLR--IPESTCAKDIQKAAAEAALAF--QDETCDTTTTN 147

Query: 137 SPSSLCSLMSEEKVVPN-----YFWDEEEVFNMPAIIAGIAEGLIITPPGMKREFDWEDS 196
               +   M E    P      ++ DEE +F MP ++  +AEG+++ PP ++   ++ D 
Sbjct: 148 HGLDMEETMVEAIYTPEQSEGAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHNY-DG 207

Query: 197 ENTMELSLWSH 202
           E   ++SLWS+
Sbjct: 208 EGDGDVSLWSY 213

[Close]

BLAST of IVF0003726 vs. TAIR 10
Match: AT4G25480.1 (dehydration response element B1A )

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-29
Identity = 76/202 (37.62%), Postives = 122/202 (60.40%), Query Frame = 0


Query: 4   SSSSSTNDHLPP-PTTVAKRKAGRKKFQETRHPIYKGVRQRN-GKWVCELRQPNKKSSFW 63
           SS SS  D++P   ++  K+ AGRKKF+ETRHPIY+GVR+RN GKWVCE+R+PNKK+  W
Sbjct: 17  SSVSSGGDYIPTLASSCPKKPAGRKKFRETRHPIYRGVRRRNSGKWVCEVREPNKKTRIW 76

Query: 64  VGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAET 123
           +GTF + + AA A+DV ALA++G S  LNF + A      +  S+   DI+  A + A  
Sbjct: 77  LGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLR--IPESTCAKDIQKAAAEAALA 136

Query: 124 FTSS--DIMMPLSSPSSPSSLCSLMSEEKVVPNYFWDEEEVFNMPAIIAGIAEGLIITPP 183
           F     D           + + ++ + E+    ++  +E +F MP+++A +AEG+++  P
Sbjct: 137 FQDEMCDATTDHGFDMEETLVEAIYTAEQSENAFYMHDEAMFEMPSLLANMAEGMLLPLP 196

Query: 184 GMKREFDWEDSENTMELSLWSH 202
            ++   + E   +  ++SLWS+
Sbjct: 197 SVQWNHNHEVDGDDDDVSLWSY 216

[Close]

BLAST of IVF0003726 vs. TAIR 10
Match: AT4G25470.1 (C-repeat/DRE binding factor 2 )

HSP 1 Score: 125.9 bits (315), Expect = 3.6e-29
Identity = 78/205 (38.05%), Postives = 122/205 (59.51%), Query Frame = 0


Query: 4   SSSSSTNDHLPP-PTTVAKRKAGRKKFQETRHPIYKGVRQRN-GKWVCELRQPNKKSSFW 63
           S  SS  D+ P   T+  K+ AGRKKF+ETRHPIY+GVRQRN GKWVCELR+PNKK+  W
Sbjct: 17  SPVSSGGDYSPKLATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVCELREPNKKTRIW 76

Query: 64  VGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAET 123
           +GTF + + AA A+DV A+A++G S  LNF + A      +  S+   +I+  A + A  
Sbjct: 77  LGTFQTAEMAARAHDVAAIALRGRSACLNFADSAWRLR--IPESTCAKEIQKAAAEAALN 136

Query: 124 FTSSDIMMPLSSPSSPSSLCSLMSEEKVVPN-----YFWDEEEVFNMPAIIAGIAEGLII 183
           F   D M  +++ +    +   + E    P      ++ DEE +  M +++  +AEG+++
Sbjct: 137 F--QDEMCHMTTDAHGLDMEETLVEAIYTPEQSQDAFYMDEEAMLGMSSLLDNMAEGMLL 196

Query: 184 TPPGMKREFDWEDSENTMELSLWSH 202
             P ++  +++ D E   ++SLWS+
Sbjct: 197 PSPSVQWNYNF-DVEGDDDVSLWSY 216

[Close]

BLAST of IVF0003726 vs. TAIR 10
Match: AT2G36450.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 2.6e-27
Identity = 67/159 (42.14%), Postives = 97/159 (61.01%), Query Frame = 0


Query: 25  GRKKFQETRHPIYKGVRQR--NGKWVCELRQPNKKSSFWVGTFCSPKTAAIAYDVVALAI 84
           G  K    RHP+Y+GVRQR  + KWV E+R+P K +  W+GTF +P+ AAIAYDV ALA+
Sbjct: 3   GTSKDNGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALAL 62

Query: 85  KGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAETFTSSDIMMPLSSPSSPSS--L 144
           KG    LNFPN   S P   S S +  DI+A A   A  F ++   + +++ +S +S   
Sbjct: 63  KGSQAELNFPNSVSSLPAPTSMSPA--DIQAAAASAAAAFGAARDAIVMANNNSQTSGVA 122

Query: 145 CSLMSEEKVVPNYFWDEEEVFNMPAIIAGIAEGLIITPP 180
           C   S +    N F DE+ VF+MP ++  +AEG++++PP
Sbjct: 123 CMNSSYDNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPP 159

[Close]

BLAST of IVF0003726 vs. TAIR 10
Match: AT5G51990.1 (C-repeat-binding factor 4 )

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-26
Identity = 77/211 (36.49%), Postives = 116/211 (54.98%), Query Frame = 0


Query: 2   PSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRN-GKWVCELRQPNKKSSF 61
           P S SS  +  L   ++  K++AGRKKF+ETRHPIY+GVRQRN GKWVCE+R+PNKKS  
Sbjct: 21  PVSDSSECSPKL--ASSCPKKRAGRKKFRETRHPIYRGVRQRNSGKWVCEVREPNKKSRI 80

Query: 62  WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE 121
           W+GTF + + AA A+DV ALA++G S  LNF + A      +  ++   +I+  A + A 
Sbjct: 81  WLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLR--IPETTCPKEIQKAASEAAM 140

Query: 122 TFTSSDIMMPLSSPSSPSSLC-------SLMSEEKVVPNYFWDEEEVFNMPAIIAGIAEG 181
            F +        + +                +EE+    ++ D+E +  MP     +AEG
Sbjct: 141 AFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGVFYMDDEALLGMPNFFENMAEG 200

Query: 182 LIITPPGMKREFDW--EDSENTMELSLWSHE 203
           +++ PP    E  W   D +   ++SLWS +
Sbjct: 201 MLLPPP----EVGWNHNDFDGVGDVSLWSFD 223

The following BLAST results are available for this feature:

BLAST of IVF0003726 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93835	4.5e-29	39.79	Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=370...	[more]
A2WZI4	4.5e-29	38.57	Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. indica ...	[more]
Q8S9Z5	4.5e-29	38.57	Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. japonic...	[more]
Q9M0L0	1.7e-28	37.62	Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=370...	[more]
Q9SYS6	5.0e-28	38.05	Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana OX=370...	[more]

BLAST of IVF0003726 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DNN2	2.7e-109	100.00	Dehydration-responsive element-binding protein 1F-like OS=Cucumis melo var. maku...	[more]
A0A1S3B6L0	2.7e-109	100.00	dehydration-responsive element-binding protein 1F-like OS=Cucumis melo OX=3656 G...	[more]
I3WEU3	1.4e-97	92.20	CBF3 protein OS=Cucumis sativus OX=3659 GN=CBF3 PE=2 SV=1	[more]
A0A140DCV7	1.4e-97	92.20	CRT/DRE-binding factor 3 OS=Cucumis melo OX=3656 PE=2 SV=1	[more]
A0A6J1F3A6	1.5e-72	71.90	dehydration-responsive element-binding protein 1B-like OS=Cucurbita moschata OX=...	[more]

BLAST of IVF0003726 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442807.1	1.83e-141	100.00	PREDICTED: dehydration-responsive element-binding protein 1F-like [Cucumis melo]...	[more]
NP_001267604.1	4.93e-126	92.20	dehydration-responsive element-binding protein 1A-like [Cucumis sativus] >AFL034...	[more]
KAE8651078.1	1.00e-125	92.20	hypothetical protein Csa_001557 [Cucumis sativus]	[more]
XP_038906080.1	1.24e-105	78.05	dehydration-responsive element-binding protein 1B-like [Benincasa hispida]	[more]
KAG6580677.1	7.30e-94	71.90	Dehydration-responsive element-binding protein 1B, partial [Cucurbita argyrosper...	[more]

BLAST of IVF0003726 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25490.1	3.2e-30	39.79	C-repeat/DRE binding factor 1	[more]
AT4G25480.1	1.2e-29	37.62	dehydration response element B1A	[more]
AT4G25470.1	3.6e-29	38.05	C-repeat/DRE binding factor 2	[more]
AT2G36450.1	2.6e-27	42.14	Integrase-type DNA-binding superfamily protein	[more]
AT5G51990.1	1.3e-26	36.49	C-repeat-binding factor 4	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 74..94 score: 44.42 coord: 37..48 score: 41.21
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 36..98 e-value: 7.9E-16 score: 68.6
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 35..84 e-value: 2.7E-9 score: 37.1
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 36..92 score: 15.803961
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 35..93 e-value: 1.12944E-20 score: 79.6231
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 36..93 e-value: 2.3E-16 score: 61.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR31839:SF39	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1B-LIKE	coord: 12..200
None	No IPR available	PANTHER	PTHR31839	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D	coord: 12..200
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 36..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0003726.2	IVF0003726.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity