IVF0003598 (gene) Melon (IVF77) v1

Overview


Name	IVF0003598
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr01: 6061955 .. 6062482 (+)
RNA-Seq Expression	IVF0003598
Synteny	IVF0003598

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGGAAAGCAACCCCTCACCGAAGCCCTCATGAAATACCAAGAAATCATTGCTAAAACAAGCCCGTACAATGAAGGGGTTGAGAAAACTTCATTCGATGGTCTTATGCCCGAGCAAGGAAGGGAAGAAAGGCCACTCAAGATGGTAGTCATCAATGAAGTAGCAATTCAACTCCTTGAGGATAAGTCGGGTGACCTTCTTGCAATTATCTTTGGAGAAACTTTAAAGAGAGAAGAAGAACAAAAAGACCAAGAAGAGCGAGAAAGACTAGATAAAGAAAAAGTAGAAAAAGAAAGGGCTAATAAAGAGAGTAAAAAAAGAGAAGAAATCAAGGAGAAAGAAAGAGAGGAGAGGCCAAAACAAGAAAAAGAAATGAAAAAAAGGAGGAAAGGGAGAAAAGAGACAAGATGGAGAAGGCGAAGGAAGAAAGGAAGAAGAAAGAAGATGAGAAAAAGAAGAAAGAAAAAGATGAGGCGAGAAGAAAGAAAAAGGAAGTGCCCGAGGAGGCACAAGAAGAAATTGTGA

mRNA sequence

ATGTATGGAAAGCAACCCCTCACCGAAGCCCTCATGAAATACCAAGAAATCATTGCTAAAACAAGCCCGTACAATGAAGGGGTTGAGAAAACTTCATTCGATGGTCTTATGCCCGAGCAAGGAAGGGAAGAAAGGCCACTCAAGATGGTAGTCATCAATGAAGTAGCAATTCAACTCCTTGAGGATAAGTCGGGTGACCTTCTTGCAATTATCTTTGGAGAAACTTTAAAGAGAGAAGAAGAACAAAAAGACCAAGAAGAGCGAGAAAGACTAGATAAAGAAAAAGTAGAAAAAGAAAGGGCTAATAAAGAGAGTAAAAAAAGAGAAGAAATCAAGGAGAAAGAAAGAGAGGAGAGGCCAAAACAAGAAAAAGAAATGAAAAAAAGGAGGAAAGGGAGAAAAGAGACAAGATGGAGAAGGCGAAGGAAGAAAGGAAGAAGAAAGAAGATGAGAAAAAGAAGAAAGAAAAAGATGAGGCGAGAAGAAAGAAAAAGGAAGTGCCCGAGGAGGCACAAGAAGAAATTGTGA

Coding sequence (CDS)

ATGTATGGAAAGCAACCCCTCACCGAAGCCCTCATGAAATACCAAGAAATCATTGCTAAAACAAGCCCGTACAATGAAGGGGTTGAGAAAACTTCATTCGATGGTCTTATGCCCGAGCAAGGAAGGGAAGAAAGGCCACTCAAGATGGTAGTCATCAATGAAGTAGCAATTCAACTCCTTGAGGATAAGTCGGGTGACCTTCTTGCAATTATCTTTGGAGAAACTTTAAAGAGAGAAGAAGAACAAAAAGACCAAGAAGAGCGAGAAAGACTAGATAAAGAAAAAGTAGAAAAAGAAAGGGCTAATAAAGAGAGTAAAAAAAGAGAAGAAATCAAGGAGAAAGAAAGAGAGGAGAGGCCAAAACAAGAAAAAGAAATGAAAAAAAGGAGGAAAGGGAGAAAAGAGACAAGATGGAGAAGGCGAAGGAAGAAAGGAAGAAGAAAGAAGATGAGAAAAAGAAGAAAGAAAAAGATGAGGCGAGAAGAAAGAAAAAGGAAGTGCCCGAGGAGGCACAAGAAGAAATTGTGA

Protein sequence

MYGKQPLTEALMKYQEIIAKTSPYNEGVEKTSFDGLMPEQGREERPLKMVVINEVAIQLLEDKSGDLLAIIFGETLKREEEQKDQEERERLDKEKVEKERANKESKKREEIKEKEREERPKQEKEMKKRRKGRKETRWRRRRKKGRRKKMRKRRKKKMRREERKRKCPRRHKKKL

Homology

[Close]

BLAST of IVF0003598 vs. ExPASy TrEMBL
Match: A0A5D3BZ15 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00270 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 3.3e-71
Identity = 174/175 (99.43%), Postives = 174/175 (99.43%), Query Frame = 0


Query: 1   MYGKQPLTEALMKYQEIIAKTSPYNEGVEKTSFDGLMPEQGREERPLKMVVINEVAIQLL 60
           MYGKQPLTEALMKYQEIIAKTSPYNEGVEKTSFDGLMPEQGREERPLKMVVINEVAIQLL
Sbjct: 1   MYGKQPLTEALMKYQEIIAKTSPYNEGVEKTSFDGLMPEQGREERPLKMVVINEVAIQLL 60

Query: 61  EDKSGDLLAIIFGETLKREEEQKDQEERERLDKEKVEKERANKESKKREEIKEKEREERP 120
           EDKSGDLLAIIFGETLKREEEQKDQEERERLDKEKVEKERANKESKKREEIKEKEREERP
Sbjct: 61  EDKSGDLLAIIFGETLKREEEQKDQEERERLDKEKVEKERANKESKKREEIKEKEREERP 120

Query: 121 KQEKEMKKRRKGRKETRWRRRRKKGRRKKMRKRRKKKMRREERKRKCPRRHKKKL 176
           KQEKEMKKRRKGRKETRWRRRRKKGRRKKMRKRRKKKMRREERK KCPRRHKKKL
Sbjct: 121 KQEKEMKKRRKGRKETRWRRRRKKGRRKKMRKRRKKKMRREERKSKCPRRHKKKL 175

[Close]

BLAST of IVF0003598 vs. ExPASy TrEMBL
Match: A0A5A7SUZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G00150 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 3.1e-21
Identity = 99/183 (54.10%), Postives = 130/183 (71.04%), Query Frame = 0


Query: 1   MYGKQPLTEALMKYQEIIAKTSPYNEGVEKTSFDGLMPEQGREERPLKMVVINEVAIQLL 60
           M+GKQ    AL KYQ  + K S  NEG EKT  DGL+ EQ +E+RPLKMV+IN V IQL 
Sbjct: 1   MFGKQ----ALKKYQGTVGKASLSNEGAEKTPSDGLVSEQRKEKRPLKMVIINGVEIQLT 60

Query: 61  EDKSGDLLAIIFGETLKREEEQKDQE-------ERERLDKEKVEKERANKESKKREEIKE 120
           EDK GDLLAIIFGET KRE+EQK QE       E+E  +KE+ E+ER  +E K REE  E
Sbjct: 61  EDKLGDLLAIIFGETSKREDEQKVQERLEKEKVEKEEAEKEQREREREEREKKGREERVE 120

Query: 121 KEREERPKQEKEMKKRRKGRKETRWRRRRKKGRRKKM-RKRRKKKMRREERKRKCPRRHK 176
           K++E+  K++KEM++R +  KE   +++ ++ ++KK   K++KKKMR+E +KRKC RRHK
Sbjct: 121 KKKEKEKKEKKEMEERERMEKEKEVKKKEEEEKKKKEDDKKKKKKMRQEGKKRKCTRRHK 179

[Close]

BLAST of IVF0003598 vs. ExPASy TrEMBL
Match: A0A0A0K8A0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336460 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.2e-20
Identity = 66/109 (60.55%), Postives = 83/109 (76.15%), Query Frame = 0


Query: 1   MYGKQPLTEALMKYQEIIAKTSPYNEGVEKTSFDGLMPEQGREERPLKMVVINEVAIQLL 60
           M+GKQ LT+AL KYQ  + K SP+++GVE + F  L+ EQ +EE  LKMVVIN V IQLL
Sbjct: 1   MFGKQDLTKALKKYQATVGKASPFSDGVEHSPFGSLVLEQRKEEIQLKMVVINGVKIQLL 60

Query: 61  EDKSGDLLAIIFGETLKREEEQKDQEERERLDKEKVEKERANKESKKRE 110
           EDK G+LLAI+  ET KRE+EQK+QEERE L+KE + KER  +E K+RE
Sbjct: 61  EDKLGNLLAIVSRETSKREKEQKEQEEREMLEKEGMGKERVEEEQKERE 109

[Close]

BLAST of IVF0003598 vs. ExPASy TrEMBL
Match: A0A5D3C865 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001870 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.5e-04
Identity = 65/157 (41.40%), Postives = 88/157 (56.05%), Query Frame = 0


Query: 9   EALMKYQEIIAKTSPYNEGVEKTSFDGLMPEQGREERPLKMVVINEVAIQLLEDKSGDLL 68
           +AL KYQ  + K SP NE VE +   G + E+ +E+ PLK+V IN V IQL EDK  DLL
Sbjct: 21  QALKKYQATLGKASPSNEAVEHSPASGPVLEE-KEKIPLKIVFINRVKIQLPEDKLQDLL 80

Query: 69  AIIFGETLKREEEQKDQEERERLDKEKVEKERANKESKKREEIKEKEREERPKQEKEMKK 128
           AI+ GET ++EE        +R +KEK EK +   E KK E  K+K RE   K++KE + 
Sbjct: 81  AIVSGETSRKEE--------DREEKEKEEKNKEEHEEKKEEAKKKKNREGDEKKKKEEEV 140

Query: 129 RRKGRK----------------ETRWRRRRKKGRRKK 150
           RR+G +                ET++ R  KK + KK
Sbjct: 141 RRQGERLRETQDATASTFSPIAETKFERLAKKTQEKK 168

[Close]

BLAST of IVF0003598 vs. NCBI nr
Match: TYK04360.1 (hypothetical protein E5676_scaffold675G00270 [Cucumis melo var. makuwa])

HSP 1 Score: 275 bits (704), Expect = 4.79e-92
Identity = 174/175 (99.43%), Postives = 174/175 (99.43%), Query Frame = 0


Query: 1   MYGKQPLTEALMKYQEIIAKTSPYNEGVEKTSFDGLMPEQGREERPLKMVVINEVAIQLL 60
           MYGKQPLTEALMKYQEIIAKTSPYNEGVEKTSFDGLMPEQGREERPLKMVVINEVAIQLL
Sbjct: 1   MYGKQPLTEALMKYQEIIAKTSPYNEGVEKTSFDGLMPEQGREERPLKMVVINEVAIQLL 60

Query: 61  EDKSGDLLAIIFGETLKREEEQKDQEERERLDKEKVEKERANKESKKREEIKEKEREERP 120
           EDKSGDLLAIIFGETLKREEEQKDQEERERLDKEKVEKERANKESKKREEIKEKEREERP
Sbjct: 61  EDKSGDLLAIIFGETLKREEEQKDQEERERLDKEKVEKERANKESKKREEIKEKEREERP 120

Query: 121 KQEKEMKKRRKGRKETRWRRRRKKGRRKKMRKRRKKKMRREERKRKCPRRHKKKL 175
           KQEKEMKKRRKGRKETRWRRRRKKGRRKKMRKRRKKKMRREERK KCPRRHKKKL
Sbjct: 121 KQEKEMKKRRKGRKETRWRRRRKKGRRKKMRKRRKKKMRREERKSKCPRRHKKKL 175

[Close]

BLAST of IVF0003598 vs. NCBI nr
Match: KGN44567.1 (hypothetical protein Csa_016483 [Cucumis sativus])

HSP 1 Score: 109 bits (272), Expect = 2.55e-27
Identity = 66/109 (60.55%), Postives = 83/109 (76.15%), Query Frame = 0


Query: 1   MYGKQPLTEALMKYQEIIAKTSPYNEGVEKTSFDGLMPEQGREERPLKMVVINEVAIQLL 60
           M+GKQ LT+AL KYQ  + K SP+++GVE + F  L+ EQ +EE  LKMVVIN V IQLL
Sbjct: 1   MFGKQDLTKALKKYQATVGKASPFSDGVEHSPFGSLVLEQRKEEIQLKMVVINGVKIQLL 60

Query: 61  EDKSGDLLAIIFGETLKREEEQKDQEERERLDKEKVEKERANKESKKRE 109
           EDK G+LLAI+  ET KRE+EQK+QEERE L+KE + KER  +E K+RE
Sbjct: 61  EDKLGNLLAIVSRETSKREKEQKEQEEREMLEKEGMGKERVEEEQKERE 109

[Close]

BLAST of IVF0003598 vs. NCBI nr
Match: KAA0033147.1 (hypothetical protein E6C27_scaffold269G002910 [Cucumis melo var. makuwa] >TYK17087.1 hypothetical protein E5676_scaffold1032G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 111 bits (277), Expect = 4.02e-26
Identity = 105/186 (56.45%), Postives = 129/186 (69.35%), Query Frame = 0


Query: 1   MYGKQPLTEALMKYQEIIAKTSPYNEGVEKTSFDGLMPEQGREERPLKMVVINEVAIQLL 60
           M+GKQ    AL KYQ  + K S  NEG EKT  DGL+ EQ +E+RPLKMV+IN V IQL 
Sbjct: 1   MFGKQ----ALKKYQGTVGKASLSNEGAEKTPSDGLVSEQRKEKRPLKMVIINGVEIQLT 60

Query: 61  EDKSGDLLAIIFGETLKREEEQKDQEERERLDKEKVEKERANKESKKRE--EIKEKEREE 120
           EDK GDLLAIIFGET KRE+EQK QE   RL+KEKVEKE A KE ++RE  E ++K REE
Sbjct: 61  EDKLGDLLAIIFGETSKREDEQKVQE---RLEKEKVEKEEAEKEQREREREEREKKGREE 120

Query: 121 RPKQEKEMKKRRKGRKETRWRRRRKKGRRKKMR---------KRRKKKMRREERKRKCPR 175
           R +++KE +K+ K   E R R  ++K  +KK           K++KKKMR+E +KRKC R
Sbjct: 121 RVEKKKEKEKKEKKEMEERERMEKEKEVKKKEEEEKKKKEDDKKKKKKMRQEGKKRKCTR 179

[Close]

BLAST of IVF0003598 vs. NCBI nr
Match: KAA0060686.1 (hypothetical protein E6C27_scaffold22G005880 [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 2.80e-14
Identity = 46/81 (56.79%), Postives = 52/81 (64.20%), Query Frame = 0


Query: 1  MYGKQPLTEALMKYQEIIAKTSPYNEGVEKTSFDGLMPEQGREERPLKMVVINEVAIQLL 60
          M  KQ LTEALMKYQ+I+ K S  N   EKT     M E+  E+   + VVINEV IQL 
Sbjct: 1  MSVKQALTEALMKYQQIVGKASLSNPRAEKTPSGSPMLEKRTEKCLFEKVVINEVEIQLS 60

Query: 61 EDKSGDLLAIIFGETLKREEE 81
          EDK  DLL I+ GET KREEE
Sbjct: 61 EDKLSDLLIIVSGETSKREEE 81

[Close]

BLAST of IVF0003598 vs. NCBI nr
Match: TYK03307.1 (hypothetical protein E5676_scaffold298G001510 [Cucumis melo var. makuwa])

HSP 1 Score: 73.2 bits (178), Expect = 1.56e-13
Identity = 46/81 (56.79%), Postives = 51/81 (62.96%), Query Frame = 0


Query: 1  MYGKQPLTEALMKYQEIIAKTSPYNEGVEKTSFDGLMPEQGREERPLKMVVINEVAIQLL 60
          M  KQ LTEALMKYQ+I+ K S  N   EKT     M E+  E+   K VVINEV IQL 
Sbjct: 1  MSVKQALTEALMKYQQIVGKASLSNAKAEKTPSGSPMLEKRTEKCLFKKVVINEVEIQLP 60

Query: 61 EDKSGDLLAIIFGETLKREEE 81
          EDK  DLL I+  ET KREEE
Sbjct: 61 EDKLSDLLIIVSRETSKREEE 81

The following BLAST results are available for this feature:

BLAST of IVF0003598 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0003598 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BZ15	3.3e-71	99.43	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SUZ4	3.1e-21	54.10	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0K8A0	1.2e-20	60.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336460 PE=4 SV=1	[more]
A0A5D3C865	3.5e-04	41.40	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of IVF0003598 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK04360.1	4.79e-92	99.43	hypothetical protein E5676_scaffold675G00270 [Cucumis melo var. makuwa]	[more]
KGN44567.1	2.55e-27	60.55	hypothetical protein Csa_016483 [Cucumis sativus]	[more]
KAA0033147.1	4.02e-26	56.45	hypothetical protein E6C27_scaffold269G002910 [Cucumis melo var. makuwa] >TYK170...	[more]
KAA0060686.1	2.80e-14	56.79	hypothetical protein E6C27_scaffold22G005880 [Cucumis melo var. makuwa]	[more]
TYK03307.1	1.56e-13	56.79	hypothetical protein E5676_scaffold298G001510 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0003598 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 76..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0003598.1	IVF0003598.1	mRNA