IVF0003485 (gene) Melon (IVF77) v1

Overview


Name	IVF0003485
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Dynein light chain, type 1/2
Location	chr02: 21834141 .. 21835052 (+)
RNA-Seq Expression	IVF0003485
Synteny	IVF0003485

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCCATATCTCACCCACTCAACTTATCCACCCCCACCACCACCTTCATCACTCCCCATAGCTCTCACTCCCACAAATCCATGGCTACTCATAATACAACTTCCTCATCCAAATCCATGGACCCCCACCTCAGAAACCAACCTCCCGACGCCGCCGTCGCCGTCGTCACTCCTGCCGTTGTCTCTCCCCACCCAACATCACCAAAACTAGATCCCCCAACCCCTTTGTCCGACTCAGACAACTTGTCAAAATCACACCCACCTTCCCCTGTCGGCCCCAGAACAGAGCAAAAGGTAGCCAAAAAACTCAATGAAACCCCTCAAGAACACACCACTACAGAGAAATTCAATGGTTCTGAAGAGAGATTTGAACATATGATCAACTGTATCACTGCCAAAGAAAGGGAAATGAAACAACTTCTAAAGGAACATGAACATGTCACTCGCAGACTCTCTATTTCTCTTTCTTCATCTCGTAGTGGAAGAAGAAGATCATTCTATGGCTCGCAGATTCAGTTAGGAGATGTGTTTGCTAAAAATGGAGCCAAAGTGGTTTCGGCTGATATGCCACCGTTTATGCAAATCCATGCCGTCGATTGCGCTAGAAAAGCACATGACAGTATGGAAAAGTTCACTTCCAAATCCCTTGCCCTGACTCTCAAGAAGGTACATACAAATCAATTAGTTCATTTTGGTATTTCTTGTTCAAAATGGTGAATTGGGTTGGCTGATTTTGGCAGGAATTTGATGGGGTTTACGGGCCGGCATGGCATTGTATTGTGGGGAAGAGTTTTGGGTCATTTGTAACACATTCAGTGGGTGGATTTCTGTATTTTTCCATGGCTCAGAAGCTTTACATTCTTCTCTTCAAAACTACTGTACAAAGAGCCAATTAGAAATAATACTGAATAAC

mRNA sequence

GTTCCATATCTCACCCACTCAACTTATCCACCCCCACCACCACCTTCATCACTCCCCATAGCTCTCACTCCCACAAATCCATGGCTACTCATAATACAACTTCCTCATCCAAATCCATGGACCCCCACCTCAGAAACCAACCTCCCGACGCCGCCGTCGCCGTCGTCACTCCTGCCGTTGTCTCTCCCCACCCAACATCACCAAAACTAGATCCCCCAACCCCTTTGTCCGACTCAGACAACTTGTCAAAATCACACCCACCTTCCCCTGTCGGCCCCAGAACAGAGCAAAAGGTAGCCAAAAAACTCAATGAAACCCCTCAAGAACACACCACTACAGAGAAATTCAATGGTTCTGAAGAGAGATTTGAACATATGATCAACTGTATCACTGCCAAAGAAAGGGAAATGAAACAACTTCTAAAGGAACATGAACATGTCACTCGCAGACTCTCTATTTCTCTTTCTTCATCTCGTAGTGGAAGAAGAAGATCATTCTATGGCTCGCAGATTCAGTTAGGAGATGTGTTTGCTAAAAATGGAGCCAAAGTGGTTTCGGCTGATATGCCACCGTTTATGCAAATCCATGCCGTCGATTGCGCTAGAAAAGCACATGACAGTATGGAAAAGTTCACTTCCAAATCCCTTGCCCTGACTCTCAAGAAGGAATTTGATGGGGTTTACGGGCCGGCATGGCATTGTATTGTGGGGAAGAGTTTTGGGTCATTTGTAACACATTCAGTGGGTGGATTTCTGTATTTTTCCATGGCTCAGAAGCTTTACATTCTTCTCTTCAAAACTACTGTACAAAGAGCCAATTAGAAATAATACTGAATAAC

Coding sequence (CDS)

ATGGCTACTCATAATACAACTTCCTCATCCAAATCCATGGACCCCCACCTCAGAAACCAACCTCCCGACGCCGCCGTCGCCGTCGTCACTCCTGCCGTTGTCTCTCCCCACCCAACATCACCAAAACTAGATCCCCCAACCCCTTTGTCCGACTCAGACAACTTGTCAAAATCACACCCACCTTCCCCTGTCGGCCCCAGAACAGAGCAAAAGGTAGCCAAAAAACTCAATGAAACCCCTCAAGAACACACCACTACAGAGAAATTCAATGGTTCTGAAGAGAGATTTGAACATATGATCAACTGTATCACTGCCAAAGAAAGGGAAATGAAACAACTTCTAAAGGAACATGAACATGTCACTCGCAGACTCTCTATTTCTCTTTCTTCATCTCGTAGTGGAAGAAGAAGATCATTCTATGGCTCGCAGATTCAGTTAGGAGATGTGTTTGCTAAAAATGGAGCCAAAGTGGTTTCGGCTGATATGCCACCGTTTATGCAAATCCATGCCGTCGATTGCGCTAGAAAAGCACATGACAGTATGGAAAAGTTCACTTCCAAATCCCTTGCCCTGACTCTCAAGAAGGAATTTGATGGGGTTTACGGGCCGGCATGGCATTGTATTGTGGGGAAGAGTTTTGGGTCATTTGTAACACATTCAGTGGGTGGATTTCTGTATTTTTCCATGGCTCAGAAGCTTTACATTCTTCTCTTCAAAACTACTGTACAAAGAGCCAATTAG

Protein sequence

MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDPPTPLSDSDNLSKSHPPSPVGPRTEQKVAKKLNETPQEHTTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHVTRRLSISLSSSRSGRRRSFYGSQIQLGDVFAKNGAKVVSADMPPFMQIHAVDCARKAHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKTTVQRAN

Homology

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BLAST of IVF0003485 vs. ExPASy Swiss-Prot
Match: Q86A88 (Dynein light chain, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=dlcB PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.4e-16
Identity = 44/83 (53.01%), Postives = 55/83 (66.27%), Query Frame = 0


Query: 157 VVSADMPPFMQIHAVDCARKAHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSF 216
           V +ADMP FMQ  A +C  KA +  E    + +A+ +KKEFD  Y P WHCIVGKSFGSF
Sbjct: 10  VKNADMPDFMQQDATECTIKAFE--ETNIERDIAMIIKKEFDKKYSPTWHCIVGKSFGSF 69

Query: 217 VTHSVGGFLYFSMAQKLYILLFK 240
           VTH    F+YF++  K  +LLFK
Sbjct: 70  VTHETKNFIYFNI-NKHSVLLFK 89

[Close]

BLAST of IVF0003485 vs. ExPASy Swiss-Prot
Match: O02414 (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=1043166 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.2e-15
Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = 0


Query: 155 AKVVSADMPPFMQIHAVDCARKAHDSMEKFT-SKSLALTLKKEFDGVYGPAWHCIVGKSF 214
           A + +ADMP  MQ  AVDCA +A   +EKF   K +A  +KKEFD  Y P WHCIVG++F
Sbjct: 6   AVIKNADMPEDMQQDAVDCATQA---LEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNF 65

Query: 215 GSFVTHSVGGFLYFSMAQKLYILLFKT 241
           GS+VTH    F+YF + Q + +LLFK+
Sbjct: 66  GSYVTHETKHFIYFYLGQ-VAVLLFKS 88

[Close]

BLAST of IVF0003485 vs. ExPASy Swiss-Prot
Match: Q3MHR3 (Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.8e-15
Identity = 45/87 (51.72%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 155 AKVVSADMPPFMQIHAVDCARKAHDSMEKFT-SKSLALTLKKEFDGVYGPAWHCIVGKSF 214
           A + +ADM   MQ  AVDCA +A   MEK+   K +A  +KKEFD  Y P WHCIVG++F
Sbjct: 6   AVIKNADMSEDMQQDAVDCATQA---MEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNF 65

Query: 215 GSFVTHSVGGFLYFSMAQKLYILLFKT 241
           GS+VTH    F+YF + Q + ILLFK+
Sbjct: 66  GSYVTHETKHFIYFYLGQ-VAILLFKS 88

[Close]

BLAST of IVF0003485 vs. ExPASy Swiss-Prot
Match: Q96FJ2 (Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.8e-15
Identity = 45/87 (51.72%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 155 AKVVSADMPPFMQIHAVDCARKAHDSMEKFT-SKSLALTLKKEFDGVYGPAWHCIVGKSF 214
           A + +ADM   MQ  AVDCA +A   MEK+   K +A  +KKEFD  Y P WHCIVG++F
Sbjct: 6   AVIKNADMSEDMQQDAVDCATQA---MEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNF 65

Query: 215 GSFVTHSVGGFLYFSMAQKLYILLFKT 241
           GS+VTH    F+YF + Q + ILLFK+
Sbjct: 66  GSYVTHETKHFIYFYLGQ-VAILLFKS 88

[Close]

BLAST of IVF0003485 vs. ExPASy Swiss-Prot
Match: Q9D0M5 (Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.8e-15
Identity = 45/87 (51.72%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 155 AKVVSADMPPFMQIHAVDCARKAHDSMEKFT-SKSLALTLKKEFDGVYGPAWHCIVGKSF 214
           A + +ADM   MQ  AVDCA +A   MEK+   K +A  +KKEFD  Y P WHCIVG++F
Sbjct: 6   AVIKNADMSEDMQQDAVDCATQA---MEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNF 65

Query: 215 GSFVTHSVGGFLYFSMAQKLYILLFKT 241
           GS+VTH    F+YF + Q + ILLFK+
Sbjct: 66  GSYVTHETKHFIYFYLGQ-VAILLFKS 88

[Close]

BLAST of IVF0003485 vs. ExPASy TrEMBL
Match: A0A5A7UPX5 (Dynein light chain, type 1/2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002210 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 7.3e-133
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDPPTPLSDSDNLSKSHP 60
           MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDPPTPLSDSDNLSKSHP
Sbjct: 1   MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDPPTPLSDSDNLSKSHP 60

Query: 61  PSPVGPRTEQKVAKKLNETPQEHTTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHV 120
           PSPVGPRTEQKVAKKLNETPQEHTTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHV
Sbjct: 61  PSPVGPRTEQKVAKKLNETPQEHTTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHV 120

Query: 121 TRRLSISLSSSRSGRRRSFYGSQIQLGDVFAKNGAKVVSADMPPFMQIHAVDCARKAHDS 180
           TRRLSISLSSSRSGRRRSFYGSQIQLGDVFAKNGAKVVSADMPPFMQIHAVDCARKAHDS
Sbjct: 121 TRRLSISLSSSRSGRRRSFYGSQIQLGDVFAKNGAKVVSADMPPFMQIHAVDCARKAHDS 180

Query: 181 MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT 240
           MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT
Sbjct: 181 MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT 240

Query: 241 TVQRAN 247
           TVQRAN
Sbjct: 241 TVQRAN 246

[Close]

BLAST of IVF0003485 vs. ExPASy TrEMBL
Match: A0A1S3BVI8 (uncharacterized protein LOC103493957 OS=Cucumis melo OX=3656 GN=LOC103493957 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 7.3e-133
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDPPTPLSDSDNLSKSHP 60
           MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDPPTPLSDSDNLSKSHP
Sbjct: 1   MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDPPTPLSDSDNLSKSHP 60

Query: 61  PSPVGPRTEQKVAKKLNETPQEHTTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHV 120
           PSPVGPRTEQKVAKKLNETPQEHTTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHV
Sbjct: 61  PSPVGPRTEQKVAKKLNETPQEHTTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHV 120

Query: 121 TRRLSISLSSSRSGRRRSFYGSQIQLGDVFAKNGAKVVSADMPPFMQIHAVDCARKAHDS 180
           TRRLSISLSSSRSGRRRSFYGSQIQLGDVFAKNGAKVVSADMPPFMQIHAVDCARKAHDS
Sbjct: 121 TRRLSISLSSSRSGRRRSFYGSQIQLGDVFAKNGAKVVSADMPPFMQIHAVDCARKAHDS 180

Query: 181 MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT 240
           MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT
Sbjct: 181 MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT 240

Query: 241 TVQRAN 247
           TVQRAN
Sbjct: 241 TVQRAN 246

[Close]

BLAST of IVF0003485 vs. ExPASy TrEMBL
Match: A0A0A0LPA2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G008410 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.2e-128
Identity = 238/246 (96.75%), Postives = 241/246 (97.97%), Query Frame = 0


Query: 1   MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDPPTPLSDSDNLSKSHP 60
           MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLD PTPLSDSDNLSKS P
Sbjct: 1   MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDSPTPLSDSDNLSKSRP 60

Query: 61  PSPVGPRTEQKVAKKLNETPQEHTTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHV 120
           PSPVGPRTEQKVAK  NETPQEH+TTEKFNGSEERFEHMINCITAKEREMKQLLKEHEH+
Sbjct: 61  PSPVGPRTEQKVAKNPNETPQEHSTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHL 120

Query: 121 TRRLSISLSSSRSGRRRSFYGSQIQLGDVFAKNGAKVVSADMPPFMQIHAVDCARKAHDS 180
           TRRLS+SLSSSRSGRRRSFYGSQIQLGDVFAKNG KVVSADMPPFMQIHAVDCARKAHDS
Sbjct: 121 TRRLSVSLSSSRSGRRRSFYGSQIQLGDVFAKNGVKVVSADMPPFMQIHAVDCARKAHDS 180

Query: 181 MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT 240
           MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT
Sbjct: 181 MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT 240

Query: 241 TVQRAN 247
           TVQRAN
Sbjct: 241 TVQRAN 246

[Close]

BLAST of IVF0003485 vs. ExPASy TrEMBL
Match: A0A6J1E0M2 (uncharacterized protein LOC111429742 OS=Cucurbita moschata OX=3662 GN=LOC111429742 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.3e-102
Identity = 209/250 (83.60%), Postives = 219/250 (87.60%), Query Frame = 0


Query: 1   MATHNTTSSSKSMDPHLRNQPPDAAVA-VVTPAVVSPHPTSPKLDPPTPLSDSDNLSKSH 60
           MA+H T+S   S+DP+ RN P  AA A VVT A VSP+PTS KLDP TPLSDSD LSKSH
Sbjct: 1   MASHETSS---SIDPNRRNHPAAAAAASVVTLAAVSPNPTSSKLDPITPLSDSDKLSKSH 60

Query: 61  PPSP--VGPRTEQKVAKKLNETPQEHTTTEKFNGSEERFEHMINCITAKEREMKQLLKEH 120
           PPSP  VGPRT Q VAKK NE P E +TTEKFN SEE+FE MINCITAKEREMKQLLKEH
Sbjct: 61  PPSPKMVGPRTVQMVAKKPNEAPLERSTTEKFNDSEEKFERMINCITAKEREMKQLLKEH 120

Query: 121 EHVTRRLSISLSSSRSG-RRRSFYGSQIQLGDVFAKNGAKVVSADMPPFMQIHAVDCARK 180
           EH+TRRLS+SLSSSRSG RRRS  GSQI+L DVFA NG KVVSADMPPFMQIHAVDCARK
Sbjct: 121 EHLTRRLSVSLSSSRSGRRRRSICGSQIELADVFANNGVKVVSADMPPFMQIHAVDCARK 180

Query: 181 AHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYIL 240
           AHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYIL
Sbjct: 181 AHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYIL 240

Query: 241 LFKTTVQRAN 247
           LFKTTVQRAN
Sbjct: 241 LFKTTVQRAN 247

[Close]

BLAST of IVF0003485 vs. ExPASy TrEMBL
Match: A0A6J1IBG1 (uncharacterized protein LOC111471403 OS=Cucurbita maxima OX=3661 GN=LOC111471403 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.8e-97
Identity = 196/264 (74.24%), Postives = 212/264 (80.30%), Query Frame = 0


Query: 1   MATHNTT-----SSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDPPTPLSDSDNL 60
           MA+H T+     S    MD H R QP   A A      VSPHPTSPKLDP TPLSDSDNL
Sbjct: 15  MASHQTSHQRLLSPPPKMDLHRRTQPTTPAAA----TTVSPHPTSPKLDPITPLSDSDNL 74

Query: 61  SKSHPPSP-------------VGPRTEQKVAKKLNETPQEHTTTEKFNGSEERFEHMINC 120
           SKSHPPSP             VGPRT  K AKK NETP++H+TTEKFN SEE+FE MINC
Sbjct: 75  SKSHPPSPKVVPVSLHSNPKMVGPRTVHKQAKKPNETPRQHSTTEKFNDSEEKFERMINC 134

Query: 121 ITAKEREMKQLLKEHEHVTRRLSISLSSSRSGRRRSFYGSQIQLGDVFAKNGAKVVSADM 180
           IT KEREMKQLL +H+H+TRRLS+SLSSSRSGRR+S  GSQIQL ++FA NG KVVSADM
Sbjct: 135 ITTKEREMKQLLVDHQHLTRRLSVSLSSSRSGRRKSICGSQIQLAELFANNGVKVVSADM 194

Query: 181 PPFMQIHAVDCARKAHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVG 240
           PPFMQIHAVDCARKAHDSMEKFTSKSLAL+LK+EFDG YGPAWHCIVGKSFGSFVTHSVG
Sbjct: 195 PPFMQIHAVDCARKAHDSMEKFTSKSLALSLKQEFDGAYGPAWHCIVGKSFGSFVTHSVG 254

Query: 241 GFLYFSMAQKLYILLFKTTVQRAN 247
           GFLYFS+AQKLYILLFKTTV RAN
Sbjct: 255 GFLYFSLAQKLYILLFKTTVLRAN 274

[Close]

BLAST of IVF0003485 vs. NCBI nr
Match: XP_008453160.1 (PREDICTED: uncharacterized protein LOC103493957 [Cucumis melo] >KAA0057912.1 Dynein light chain, type 1/2 [Cucumis melo var. makuwa] >TYJ98600.1 Dynein light chain, type 1/2 [Cucumis melo var. makuwa])

HSP 1 Score: 483 bits (1242), Expect = 1.04e-171
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDPPTPLSDSDNLSKSHP 60
           MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDPPTPLSDSDNLSKSHP
Sbjct: 1   MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDPPTPLSDSDNLSKSHP 60

Query: 61  PSPVGPRTEQKVAKKLNETPQEHTTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHV 120
           PSPVGPRTEQKVAKKLNETPQEHTTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHV
Sbjct: 61  PSPVGPRTEQKVAKKLNETPQEHTTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHV 120

Query: 121 TRRLSISLSSSRSGRRRSFYGSQIQLGDVFAKNGAKVVSADMPPFMQIHAVDCARKAHDS 180
           TRRLSISLSSSRSGRRRSFYGSQIQLGDVFAKNGAKVVSADMPPFMQIHAVDCARKAHDS
Sbjct: 121 TRRLSISLSSSRSGRRRSFYGSQIQLGDVFAKNGAKVVSADMPPFMQIHAVDCARKAHDS 180

Query: 181 MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT 240
           MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT
Sbjct: 181 MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT 240

Query: 241 TVQRAN 246
           TVQRAN
Sbjct: 241 TVQRAN 246

[Close]

BLAST of IVF0003485 vs. NCBI nr
Match: XP_004138141.2 (uncharacterized protein LOC101215824 [Cucumis sativus] >KGN63633.1 hypothetical protein Csa_013893 [Cucumis sativus])

HSP 1 Score: 467 bits (1202), Expect = 1.31e-165
Identity = 238/246 (96.75%), Postives = 241/246 (97.97%), Query Frame = 0


Query: 1   MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDPPTPLSDSDNLSKSHP 60
           MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLD PTPLSDSDNLSKS P
Sbjct: 1   MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDSPTPLSDSDNLSKSRP 60

Query: 61  PSPVGPRTEQKVAKKLNETPQEHTTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHV 120
           PSPVGPRTEQKVAK  NETPQEH+TTEKFNGSEERFEHMINCITAKEREMKQLLKEHEH+
Sbjct: 61  PSPVGPRTEQKVAKNPNETPQEHSTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHL 120

Query: 121 TRRLSISLSSSRSGRRRSFYGSQIQLGDVFAKNGAKVVSADMPPFMQIHAVDCARKAHDS 180
           TRRLS+SLSSSRSGRRRSFYGSQIQLGDVFAKNG KVVSADMPPFMQIHAVDCARKAHDS
Sbjct: 121 TRRLSVSLSSSRSGRRRSFYGSQIQLGDVFAKNGVKVVSADMPPFMQIHAVDCARKAHDS 180

Query: 181 MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT 240
           MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT
Sbjct: 181 MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT 240

Query: 241 TVQRAN 246
           TVQRAN
Sbjct: 241 TVQRAN 246

[Close]

BLAST of IVF0003485 vs. NCBI nr
Match: XP_038879954.1 (uncharacterized protein LOC120071657 [Benincasa hispida])

HSP 1 Score: 417 bits (1073), Expect = 9.19e-146
Identity = 222/259 (85.71%), Postives = 230/259 (88.80%), Query Frame = 0


Query: 1   MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDPPTPLSDSDNLSKSHP 60
           MA+HNT+SSSKSMDPH RNQPP AA AVVTPAVVSPHPTSPKLDP TPLSDSDNLSKS+P
Sbjct: 1   MASHNTSSSSKSMDPHRRNQPP-AAAAVVTPAVVSPHPTSPKLDPTTPLSDSDNLSKSNP 60

Query: 61  PSP-------------VGPRTEQKVAKKLNETPQEHTTTEKFNGSEERFEHMINCITAKE 120
           PSP             VGP T QKVAKK NETPQEH+TTEKFN SEER+E MINCITAKE
Sbjct: 61  PSPKVDSISLHSHPKMVGPITVQKVAKKPNETPQEHSTTEKFNDSEERYERMINCITAKE 120

Query: 121 REMKQLLKEHEHVTRRLSISLSSSRSGRRRSFYGSQIQLGDVFAKNGAKVVSADMPPFMQ 180
           REMKQLLKEHEH+TRRLS+SLSSSRSGRR+S   SQIQL DVFA NG KVVSADMPPFMQ
Sbjct: 121 REMKQLLKEHEHLTRRLSVSLSSSRSGRRKSICVSQIQLADVFANNGVKVVSADMPPFMQ 180

Query: 181 IHAVDCARKAHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYF 240
           IHAVDCARK HDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYF
Sbjct: 181 IHAVDCARKTHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYF 240

Query: 241 SMAQKLYILLFKTTVQRAN 246
           SMAQKLYILLFKTTVQRAN
Sbjct: 241 SMAQKLYILLFKTTVQRAN 258

[Close]

BLAST of IVF0003485 vs. NCBI nr
Match: KAG6589483.1 (Dynein light chain, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 389 bits (1000), Expect = 7.08e-135
Identity = 211/249 (84.74%), Postives = 221/249 (88.76%), Query Frame = 0


Query: 1   MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDPPTPLSDSDNLSKSHP 60
           MA+H T+SS   +DP+ RN P   A +VVT A VSP+PTSPKLDP TPLSDSD LSKSHP
Sbjct: 1   MASHETSSS---IDPNRRNHP---AASVVTLAAVSPNPTSPKLDPITPLSDSDKLSKSHP 60

Query: 61  PSP--VGPRTEQKVAKKLNETPQEHTTTEKFNGSEERFEHMINCITAKEREMKQLLKEHE 120
           PSP  VGPRT Q VAKK NE PQEH+TTEKFN SEERFE MINCITAKEREMKQLLKEHE
Sbjct: 61  PSPKMVGPRTVQMVAKKPNEAPQEHSTTEKFNNSEERFERMINCITAKEREMKQLLKEHE 120

Query: 121 HVTRRLSISLSSSRSGRRR-SFYGSQIQLGDVFAKNGAKVVSADMPPFMQIHAVDCARKA 180
           H+TRRLS+SLSSSRSGRRR S  GSQI+L DVFA NG KVVSADMPPFMQIHAVDCARKA
Sbjct: 121 HLTRRLSVSLSSSRSGRRRRSICGSQIELADVFANNGVKVVSADMPPFMQIHAVDCARKA 180

Query: 181 HDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILL 240
           HDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILL
Sbjct: 181 HDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILL 240

Query: 241 FKTTVQRAN 246
           FKTTVQRAN
Sbjct: 241 FKTTVQRAN 243

[Close]

BLAST of IVF0003485 vs. NCBI nr
Match: XP_023516401.1 (uncharacterized protein LOC111780277 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 389 bits (1000), Expect = 7.60e-135
Identity = 211/249 (84.74%), Postives = 222/249 (89.16%), Query Frame = 0


Query: 1   MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDPPTPLSDSDNLSKSHP 60
           MA+H T+SS   +DP+ RN P  AA +VVT A VSP+PTSPKLDP TPLSDSD LSKSHP
Sbjct: 1   MASHETSSS---IDPNRRNHPA-AAASVVTLAAVSPNPTSPKLDPITPLSDSDKLSKSHP 60

Query: 61  PSP--VGPRTEQKVAKKLNETPQEHTTTEKFNGSEERFEHMINCITAKEREMKQLLKEHE 120
           PSP  VGPRT Q VAKK NE PQEH+TTEKFN SEE+FE MINCITAKEREMKQLLKEHE
Sbjct: 61  PSPKMVGPRTVQMVAKKPNEAPQEHSTTEKFNDSEEKFERMINCITAKEREMKQLLKEHE 120

Query: 121 HVTRRLSISLSSSRSGRRR-SFYGSQIQLGDVFAKNGAKVVSADMPPFMQIHAVDCARKA 180
           H+TRRLS+SLSSSRSGRRR S  GSQI+L DVFA NG KVVSADMPPFMQIHAVDCARKA
Sbjct: 121 HLTRRLSVSLSSSRSGRRRRSICGSQIELADVFANNGVKVVSADMPPFMQIHAVDCARKA 180

Query: 181 HDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILL 240
           HDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILL
Sbjct: 181 HDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILL 240

Query: 241 FKTTVQRAN 246
           FKTTVQRAN
Sbjct: 241 FKTTVQRAN 245

[Close]

BLAST of IVF0003485 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 127.1 bits (318), Expect = 2.0e-29
Identity = 61/91 (67.03%), Postives = 72/91 (79.12%), Query Frame = 0


Query: 156 KVVSADMPPFMQIHAVDCARKAHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGS 215
           ++++ADMP FMQ HA  CAR   DS+EKF+SK +A  LKKEFD  YGPAWHCIVG SFGS
Sbjct: 118 RILAADMPGFMQAHAFRCARMTLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFGS 177

Query: 216 FVTHSVGGFLYFSMAQKLYILLFKTTVQRAN 247
           FVTHS G F+YFSM  KLY+LLFKT V+ A+
Sbjct: 178 FVTHSTGCFIYFSM-DKLYVLLFKTKVRPAS 207

[Close]

BLAST of IVF0003485 vs. TAIR 10
Match: AT1G23220.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 92.4 bits (228), Expect = 5.3e-19
Identity = 55/116 (47.41%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 135 RRRSFYGSQIQ------LGDVFAKNGAKVVSADMPPFMQIHAVDCARKAHDSME-KFTSK 194
           RR  F  S IQ        D   +   +V ++DMP   Q  A   +R+  ++   K  +K
Sbjct: 10  RRSKFLNSLIQKKKAKEQQDQKDEFNVRVRASDMPLPQQNRAFSLSREILNATPGKADNK 69

Query: 195 SLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKTTVQ 244
            LA  LKK+FD  YGPAWHCIVG SFGS+VTHS GGFLYF +  K+Y+LLFKT V+
Sbjct: 70  RLAHALKKDFDSAYGPAWHCIVGTSFGSYVTHSTGGFLYFQI-DKVYVLLFKTAVE 124

[Close]

BLAST of IVF0003485 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 76.6 bits (187), Expect = 3.0e-14
Identity = 40/85 (47.06%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 155 AKVVSADMPPFMQIHAVDCARKAHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFG 214
           A V  +DMP  MQ+ A+  A +A D  + F  KS+A  +KKEFD  YG  W C+VG +FG
Sbjct: 6   AMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVVGSNFG 65

Query: 215 SFVTHSVGGFLYFSMAQKLYILLFK 240
            F THS G F+YF + + L  L+FK
Sbjct: 66  CFFTHSKGTFIYFQL-ETLKFLIFK 89

[Close]

BLAST of IVF0003485 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 76.3 bits (186), Expect = 4.0e-14
Identity = 40/85 (47.06%), Postives = 52/85 (61.18%), Query Frame = 0


Query: 155 AKVVSADMPPFMQIHAVDCARKAHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFG 214
           AKV   DMP  MQ+ A+  A ++ D  + F S S+A  +KKEFD  YG  W C+VG +FG
Sbjct: 6   AKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVVGTNFG 65

Query: 215 SFVTHSVGGFLYFSMAQKLYILLFK 240
            F THS G F+YF +   L  L+FK
Sbjct: 66  CFFTHSKGTFIYFHLG-TLNFLIFK 89

[Close]

BLAST of IVF0003485 vs. TAIR 10
Match: AT4G15930.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 74.3 bits (181), Expect = 1.5e-13
Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 0


Query: 155 AKVVSADMPPFMQIHAVDCARKAHDSMEKFT-SKSLALTLKKEFDGVYGPAWHCIVGKSF 214
           A + SADM   MQ  A++ A  A    EK++  K +A  +KKEFD  +G  WHCIVG++F
Sbjct: 40  AVIKSADMKDDMQKEAIEIAISA---FEKYSVEKDIAENIKKEFDKKHGATWHCIVGRNF 99

Query: 215 GSFVTHSVGGFLYFSMAQKLYILLFKT 241
           GS+VTH    F+YF + QK  +LLFK+
Sbjct: 100 GSYVTHETNHFVYFYLDQKA-VLLFKS 122

The following BLAST results are available for this feature:

BLAST of IVF0003485 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q86A88	5.4e-16	53.01	Dynein light chain, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=dlcB PE=...	[more]
O02414	1.2e-15	51.72	Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=10431...	[more]
Q3MHR3	7.8e-15	51.72	Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1	[more]
Q96FJ2	7.8e-15	51.72	Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1	[more]
Q9D0M5	7.8e-15	51.72	Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1	[more]

BLAST of IVF0003485 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UPX5	7.3e-133	100.00	Dynein light chain, type 1/2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3BVI8	7.3e-133	100.00	uncharacterized protein LOC103493957 OS=Cucumis melo OX=3656 GN=LOC103493957 PE=...	[more]
A0A0A0LPA2	3.2e-128	96.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G008410 PE=4 SV=1	[more]
A0A6J1E0M2	2.3e-102	83.60	uncharacterized protein LOC111429742 OS=Cucurbita moschata OX=3662 GN=LOC1114297...	[more]
A0A6J1IBG1	3.8e-97	74.24	uncharacterized protein LOC111471403 OS=Cucurbita maxima OX=3661 GN=LOC111471403...	[more]

BLAST of IVF0003485 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453160.1	1.04e-171	100.00	PREDICTED: uncharacterized protein LOC103493957 [Cucumis melo] >KAA0057912.1 Dyn...	[more]
XP_004138141.2	1.31e-165	96.75	uncharacterized protein LOC101215824 [Cucumis sativus] >KGN63633.1 hypothetical ...	[more]
XP_038879954.1	9.19e-146	85.71	uncharacterized protein LOC120071657 [Benincasa hispida]	[more]
KAG6589483.1	7.08e-135	84.74	Dynein light chain, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023516401.1	7.60e-135	84.74	uncharacterized protein LOC111780277 [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0003485 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20110.1	2.0e-29	67.03	Dynein light chain type 1 family protein	[more]
AT1G23220.1	5.3e-19	47.41	Dynein light chain type 1 family protein	[more]
AT1G52240.2	3.0e-14	47.06	RHO guanyl-nucleotide exchange factor 11	[more]
AT3G16120.1	4.0e-14	47.06	Dynein light chain type 1 family protein	[more]
AT4G15930.1	1.5e-13	47.13	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 103..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..63
None	No IPR available	PANTHER	PTHR11886:SF80	INTRASTRAND CROSS-LINK RECOGNITION PROTEIN-LIKE	coord: 9..246
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 150..240 e-value: 7.8E-38 score: 141.7
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 155..240 e-value: 1.7E-28 score: 98.8
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 9..246
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 149..241 e-value: 1.3E-30 score: 107.2
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 153..240

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0003485.1	IVF0003485.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0030286	dynein complex
molecular_function	GO:0045505	dynein intermediate chain binding
molecular_function	GO:0051959	dynein light intermediate chain binding