IVF0003355 (gene) Melon (IVF77) v1

Overview


Name	IVF0003355
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Ribonuclease H
Location	chr08: 27472246 .. 27473286 (-)
RNA-Seq Expression	IVF0003355
Synteny	IVF0003355

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTTTCGATGGTGCCTCAAATGAGCTGGAACATGGGATTAGAGTTGTGCTAATTTCTCCAGAAGGAAAGCTTTTCCCCCTAACGACCAAGTTATGTTTTGAATGCACTCACAATATCGTTGAATATGAAGCTTGCATTATGGGACTTCAAGTAGCATGCGATATGAGTATTAAAAAGTTGAAAGTTTTAGGTGACTCGATGTTAGTGATACATCAAGTAAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTACCTTACATCCAATACGTTACAAAATTGTCTCAAAATTTTGAGAAGATTTCATTTAACCATGTTCTTAAGGAAGACAATCAAATGGCGGATGCATTAGCCACACTGGCAGTGATGTTTGATCTTAATCTTGAATTTGAACTTCATCCAATCCAAATTACAAAGCGAGATGTGCCAGCATATTGCATGAATGTTGGAAATGATAACAAGCCATGGTATTTTGACATTAAGCAATACATAAAGTGTAGAGAATATCCATATGCTTCAGAGACTGACAAACGCACAATAAGAAGGTTGGCCATGAACTTTTTCTTAAGTGGTGAAGTTCTTTATAAAAGAAACCACAATATGGTGCTCCTTCGGTGTGTTGATGAAGAGGAAGCAAAACAAATTATGACAAACATTCATGAAGGAATATGTGGAACACATGCTAATGGACATATGATGGCTAGACAAATACTTAGATCTGGTTATTATTGGACAACAATGGAATCAGATTGCATAAAATATGCAAGGAAATGTAAAAAGTGTCAAATTTATATGGATAAGATCCATGTAGCAACATCTCCATTACATATCTTGTCATCACCATGGCCATTTTCTTTATGGGGAATGGATGTTATTGGACCCATTGATCCTAAAGCCTCAAATGGCCATCGTTTTATTCTTGTGGCCATTGATTACTTCATTAAATGTATAGAGGCTGCATCTTATTGCAATGTTACAAAGGGAGTTGTGCTCAAGTTTATAAAGAAAGAGCTTATATGTCGTTATGGTCTCCCATAA

mRNA sequence

ATGCTTTTCGATGGTGCCTCAAATGAGCTGGAACATGGGATTAGAGTTGTGCTAATTTCTCCAGAAGGAAAGCTTTTCCCCCTAACGACCAAGTTATGTTTTGAATGCACTCACAATATCGTTGAATATGAAGCTTGCATTATGGGACTTCAAGTAGCATGCGATATGAGTATTAAAAAGTTGAAAGTTTTAGGTGACTCGATGTTAGTGATACATCAAGTAAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTACCTTACATCCAATACGTTACAAAATTGTCTCAAAATTTTGAGAAGATTTCATTTAACCATGTTCTTAAGGAAGACAATCAAATGGCGGATGCATTAGCCACACTGGCAGTGATGTTTGATCTTAATCTTGAATTTGAACTTCATCCAATCCAAATTACAAAGCGAGATGTGCCAGCATATTGCATGAATGTTGGAAATGATAACAAGCCATGGTATTTTGACATTAAGCAATACATAAAGTGTAGAGAATATCCATATGCTTCAGAGACTGACAAACGCACAATAAGAAGGTTGGCCATGAACTTTTTCTTAAGTGGTGAAGTTCTTTATAAAAGAAACCACAATATGGTGCTCCTTCGGTGTGTTGATGAAGAGGAAGCAAAACAAATTATGACAAACATTCATGAAGGAATATGTGGAACACATGCTAATGGACATATGATGGCTAGACAAATACTTAGATCTGGTTATTATTGGACAACAATGGAATCAGATTGCATAAAATATGCAAGGAAATGTAAAAAGTGTCAAATTTATATGGATAAGATCCATGTAGCAACATCTCCATTACATATCTTGTCATCACCATGGCCATTTTCTTTATGGGGAATGGATGTTATTGGACCCATTGATCCTAAAGCCTCAAATGGCCATCGTTTTATTCTTGTGGCCATTGATTACTTCATTAAATGTATAGAGGCTGCATCTTATTGCAATGTTACAAAGGGAGTTGTGCTCAAGTTTATAAAGAAAGAGCTTATATGTCGTTATGGTCTCCCATAA

Coding sequence (CDS)

ATGCTTTTCGATGGTGCCTCAAATGAGCTGGAACATGGGATTAGAGTTGTGCTAATTTCTCCAGAAGGAAAGCTTTTCCCCCTAACGACCAAGTTATGTTTTGAATGCACTCACAATATCGTTGAATATGAAGCTTGCATTATGGGACTTCAAGTAGCATGCGATATGAGTATTAAAAAGTTGAAAGTTTTAGGTGACTCGATGTTAGTGATACATCAAGTAAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTACCTTACATCCAATACGTTACAAAATTGTCTCAAAATTTTGAGAAGATTTCATTTAACCATGTTCTTAAGGAAGACAATCAAATGGCGGATGCATTAGCCACACTGGCAGTGATGTTTGATCTTAATCTTGAATTTGAACTTCATCCAATCCAAATTACAAAGCGAGATGTGCCAGCATATTGCATGAATGTTGGAAATGATAACAAGCCATGGTATTTTGACATTAAGCAATACATAAAGTGTAGAGAATATCCATATGCTTCAGAGACTGACAAACGCACAATAAGAAGGTTGGCCATGAACTTTTTCTTAAGTGGTGAAGTTCTTTATAAAAGAAACCACAATATGGTGCTCCTTCGGTGTGTTGATGAAGAGGAAGCAAAACAAATTATGACAAACATTCATGAAGGAATATGTGGAACACATGCTAATGGACATATGATGGCTAGACAAATACTTAGATCTGGTTATTATTGGACAACAATGGAATCAGATTGCATAAAATATGCAAGGAAATGTAAAAAGTGTCAAATTTATATGGATAAGATCCATGTAGCAACATCTCCATTACATATCTTGTCATCACCATGGCCATTTTCTTTATGGGGAATGGATGTTATTGGACCCATTGATCCTAAAGCCTCAAATGGCCATCGTTTTATTCTTGTGGCCATTGATTACTTCATTAAATGTATAGAGGCTGCATCTTATTGCAATGTTACAAAGGGAGTTGTGCTCAAGTTTATAAAGAAAGAGCTTATATGTCGTTATGGTCTCCCATAA

Protein sequence

MLFDGASNELEHGIRVVLISPEGKLFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYASETDKRTIRRLAMNFFLSGEVLYKRNHNMVLLRCVDEEEAKQIMTNIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARKCKKCQIYMDKIHVATSPLHILSSPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFIKCIEAASYCNVTKGVVLKFIKKELICRYGLP

Homology

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BLAST of IVF0003355 vs. ExPASy Swiss-Prot
Match: Q8K259 (Gypsy retrotransposon integrase-like protein 1 OS=Mus musculus OX=10090 GN=Gin1 PE=2 SV=2)

HSP 1 Score: 75.5 bits (184), Expect = 1.3e-12
Identity = 50/181 (27.62%), Postives = 90/181 (49.72%), Query Frame = 0


Query: 161 IKQYIKCREY-PYASETDKRTIRRLAMNFFLSGEVLY----KRNHNMVLLRCVDEEEAKQ 220
           I  Y +  EY P    +++  IRR A  F    + L+     R  N +++  V EEE K+
Sbjct: 15  IAYYKRTGEYHPTTLPSERSGIRRAAKKFVFKEKKLFYVGKDRKQNRLVV--VSEEEKKK 74

Query: 221 IMTNIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARKCKKCQIYMDKIHVATSP 280
           ++   HE   G H +G      ++ SGYYWT++ +D  ++   C+ CQ+  + + VA   
Sbjct: 75  VLRECHENGPGVH-HGISRTLTLVESGYYWTSVTNDVKQWVYACQHCQVAKNTVIVAPQQ 134

Query: 281 -LHILSSPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFIKCIEAASYCNVTKGVVLKF 336
            L ++ +PW  S+  +D++GP    ++  H + ++  D F K +     C+V+   + K 
Sbjct: 135 HLPMVGNPW--SVVTVDLMGPFH-TSNRSHVYAIIMTDLFTKWVMILPLCDVSASEISKA 189

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BLAST of IVF0003355 vs. ExPASy TrEMBL
Match: A0A5D3DEM4 (RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1721G00450 PE=4 SV=1)

HSP 1 Score: 726.9 bits (1875), Expect = 4.1e-206
Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0


Query: 1   MLFDGASNELEHGIRVVLISPEGKLFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK 60
           MLFDGASNELEHGIRVVLISPEGKLFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK
Sbjct: 144 MLFDGASNELEHGIRVVLISPEGKLFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK 203

Query: 61  LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT 120
           LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT
Sbjct: 204 LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT 263

Query: 121 LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYASETDKRT 180
           LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYASETDKRT
Sbjct: 264 LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYASETDKRT 323

Query: 181 IRRLAMNFFLSGEVLYKRNHNMVLLRCVDEEEAKQIMTNIHEGICGTHANGHMMARQILR 240
           IRRLAMNFFLSGEVLYKRNHNMVLLRCVDEEEAKQIMTNIHEGICGTHANGHMMARQILR
Sbjct: 324 IRRLAMNFFLSGEVLYKRNHNMVLLRCVDEEEAKQIMTNIHEGICGTHANGHMMARQILR 383

Query: 241 SGYYWTTMESDCIKYARKCKKCQIYMDKIHVATSPLHILSSPWPFSLWGMDVIGPIDPKA 300
           SGYYWTTMESDCIKYARKCKKCQIYMDKIHVATSPLHILSSPWPFSLWGMDVIGPIDPKA
Sbjct: 384 SGYYWTTMESDCIKYARKCKKCQIYMDKIHVATSPLHILSSPWPFSLWGMDVIGPIDPKA 443

Query: 301 SNGHRFILVAIDYFIKCIEAASYCNVTKGVVLKFIKKELICRYGLP 347
           SNGHRFILVAIDYFIKCIEAASYCNVTKGVVLKFIKKELICRYGLP
Sbjct: 444 SNGHRFILVAIDYFIKCIEAASYCNVTKGVVLKFIKKELICRYGLP 489

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BLAST of IVF0003355 vs. ExPASy TrEMBL
Match: A0A5A7VHZ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001360 PE=4 SV=1)

HSP 1 Score: 705.7 bits (1820), Expect = 9.7e-200
Identity = 339/345 (98.26%), Postives = 340/345 (98.55%), Query Frame = 0


Query: 1   MLFDGASNELEHGIRVVLISPEGKLFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK 60
           MLFDGASNELEHGI VVLISPEGK+FPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK
Sbjct: 287 MLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK 346

Query: 61  LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT 120
           LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT
Sbjct: 347 LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT 406

Query: 121 LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY-ASETDKR 180
           LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY ASETDKR
Sbjct: 407 LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYEASETDKR 466

Query: 181 TIRRLAMNFFLSGEVLYKRNHNMVLLRCVDEEEAKQIMTNIHEGICGTHANGHMMARQIL 240
           TIRRLAMNFFLSGEVLYKRNHNMVLLRCVDEEEAKQIMTNIHEGICGTHANGHMMARQIL
Sbjct: 467 TIRRLAMNFFLSGEVLYKRNHNMVLLRCVDEEEAKQIMTNIHEGICGTHANGHMMARQIL 526

Query: 241 RSGYYWTTMESDCIKYARKCKKCQIYMDKIHVATSPLHILSSPWPFSLWGMDVIGPIDPK 300
           RSGYYWTTMESDCIKYARKCKKCQIYMDKIHVA SPLHILSSPWP SLWGMDVIGPIDPK
Sbjct: 527 RSGYYWTTMESDCIKYARKCKKCQIYMDKIHVAASPLHILSSPWPLSLWGMDVIGPIDPK 586

Query: 301 ASNGHRFILVAIDYFIKCIEAASYCNVTKGVVLKFIKKELICRYG 345
           ASNGHRFILVAIDYFIK IEAASYCNVTKGVVLKFIKKELICRYG
Sbjct: 587 ASNGHRFILVAIDYFIKWIEAASYCNVTKGVVLKFIKKELICRYG 631

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BLAST of IVF0003355 vs. ExPASy TrEMBL
Match: A0A5A7T1X2 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00190 PE=4 SV=1)

HSP 1 Score: 677.2 bits (1746), Expect = 3.7e-191
Identity = 324/347 (93.37%), Postives = 334/347 (96.25%), Query Frame = 0


Query: 1   MLFDGASNELEHGIRVVLISPEGKLFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK 60
           MLFDGASNEL HGI VVLISPEGK+FPLT KLCFECTHNI EYEACIMGLQVACDMSIKK
Sbjct: 1   MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQVACDMSIKK 60

Query: 61  LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT 120
           LKVLGDSMLVIHQVKEEWETRDAKLVPY QYVTKLSQ FEKISF+HV +EDN+MADALAT
Sbjct: 61  LKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQKFEKISFDHVPREDNRMADALAT 120

Query: 121 LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY-ASETDKR 180
           LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY ASE DKR
Sbjct: 121 LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYEASENDKR 180

Query: 181 TIRRLAMNFFLSGEVLYKRNHNMVLLRCVDEEEAKQIMTNIHEGICGTHANGHMMARQIL 240
           TIRRLAMNFFLSGEVLYKRNH+MVLLRCVDEEEAKQIMT+I+EGICGTHANGHMMARQIL
Sbjct: 181 TIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQIL 240

Query: 241 RSGYYWTTMESDCIKYARKCKKCQIYMDKIHVATSPLHILSSPWPFSLWGMDVIGPIDPK 300
           RSGYYWTTMESDCIKYAR+CKKCQIYMDKIHVA S LHILS+PWPFSLWGMDVIGPIDPK
Sbjct: 241 RSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASSLHILSAPWPFSLWGMDVIGPIDPK 300

Query: 301 ASNGHRFILVAIDYFIKCIEAASYCNVTKGVVLKFIKKELICRYGLP 347
           ASNGHRFILVAIDYF K IEAASYCNVT+GVVLKFIKKELICRYGLP
Sbjct: 301 ASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLP 347

[Close]

BLAST of IVF0003355 vs. ExPASy TrEMBL
Match: A0A5A7TRL7 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00010 PE=4 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 2.4e-190
Identity = 321/347 (92.51%), Postives = 333/347 (95.97%), Query Frame = 0


Query: 1    MLFDGASNELEHGIRVVLISPEGKLFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK 60
            MLFDGASNEL HGI VVLISPEGK+FPLT KLCFECTHNI EYEACIMGL+VACDMSIKK
Sbjct: 1240 MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLRVACDMSIKK 1299

Query: 61   LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT 120
            LKVLGDSMLVIHQVKEEWETR AKLVPY QYVTKLSQNFEKISF+HV +EDN+MADALAT
Sbjct: 1300 LKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLSQNFEKISFDHVPREDNRMADALAT 1359

Query: 121  LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY-ASETDKR 180
            LA+MFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY A E DKR
Sbjct: 1360 LAMMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYEALENDKR 1419

Query: 181  TIRRLAMNFFLSGEVLYKRNHNMVLLRCVDEEEAKQIMTNIHEGICGTHANGHMMARQIL 240
            TIR+LAMNFFLSGEV YKRNH+MVLLRCVDEEEAKQIMT+IHEGICGTHANGHMMARQIL
Sbjct: 1420 TIRKLAMNFFLSGEVFYKRNHDMVLLRCVDEEEAKQIMTDIHEGICGTHANGHMMARQIL 1479

Query: 241  RSGYYWTTMESDCIKYARKCKKCQIYMDKIHVATSPLHILSSPWPFSLWGMDVIGPIDPK 300
            RSGYYWTTMESDCIKYAR+CKKCQIYMDKIHVA SPLHILS+PWPFSLWGMDVIGPIDPK
Sbjct: 1480 RSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPK 1539

Query: 301  ASNGHRFILVAIDYFIKCIEAASYCNVTKGVVLKFIKKELICRYGLP 347
            ASNGHRFILVAIDYF K IEAASYCNVT+GVVLKFIKKELICRYGLP
Sbjct: 1540 ASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLP 1586

[Close]

BLAST of IVF0003355 vs. ExPASy TrEMBL
Match: A0A5D3DMD2 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00160 PE=4 SV=1)

HSP 1 Score: 671.0 bits (1730), Expect = 2.7e-189
Identity = 321/347 (92.51%), Postives = 329/347 (94.81%), Query Frame = 0


Query: 1   MLFDGASNELEHGIRVVLISPEGKLFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK 60
           MLFDGASNEL HGI VVLISPEGK+FPLT KLCFECTHNI EYEACIMGLQVACDMSIKK
Sbjct: 399 MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQVACDMSIKK 458

Query: 61  LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT 120
           LKVLGDSMLVIHQVKEEWETRDAKLVPY QYVTKLSQNFEKISF+HV +EDN+MADALAT
Sbjct: 459 LKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRMADALAT 518

Query: 121 LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY-ASETDKR 180
           LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY ASE DKR
Sbjct: 519 LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYEASENDKR 578

Query: 181 TIRRLAMNFFLSGEVLYKRNHNMVLLRCVDEEEAKQIMTNIHEGICGTHANGHMMARQIL 240
            IRRL MNFFLSGEVLYKRNH+MVLLRCVDEEEAKQIMT+IHEGICGTHANGHMMARQIL
Sbjct: 579 AIRRLTMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIHEGICGTHANGHMMARQIL 638

Query: 241 RSGYYWTTMESDCIKYARKCKKCQIYMDKIHVATSPLHILSSPWPFSLWGMDVIGPIDPK 300
           RSGYYWTTMESDCIKYARKCKKCQIYMDKIHVA SPLHI S+ WPFSLWGMDVIG IDPK
Sbjct: 639 RSGYYWTTMESDCIKYARKCKKCQIYMDKIHVAASPLHIFSASWPFSLWGMDVIGSIDPK 698

Query: 301 ASNGHRFILVAIDYFIKCIEAASYCNVTKGVVLKFIKKELICRYGLP 347
           ASNGH FILVAIDYF K IE ASYCNVT+GVVLKFIKKELICRYGLP
Sbjct: 699 ASNGHPFILVAIDYFTKWIEVASYCNVTRGVVLKFIKKELICRYGLP 745

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BLAST of IVF0003355 vs. NCBI nr
Match: TYK21789.1 (uncharacterized protein E5676_scaffold1721G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 727 bits (1876), Expect = 1.14e-262
Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0


Query: 1   MLFDGASNELEHGIRVVLISPEGKLFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK 60
           MLFDGASNELEHGIRVVLISPEGKLFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK
Sbjct: 144 MLFDGASNELEHGIRVVLISPEGKLFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK 203

Query: 61  LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT 120
           LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT
Sbjct: 204 LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT 263

Query: 121 LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYASETDKRT 180
           LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYASETDKRT
Sbjct: 264 LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYASETDKRT 323

Query: 181 IRRLAMNFFLSGEVLYKRNHNMVLLRCVDEEEAKQIMTNIHEGICGTHANGHMMARQILR 240
           IRRLAMNFFLSGEVLYKRNHNMVLLRCVDEEEAKQIMTNIHEGICGTHANGHMMARQILR
Sbjct: 324 IRRLAMNFFLSGEVLYKRNHNMVLLRCVDEEEAKQIMTNIHEGICGTHANGHMMARQILR 383

Query: 241 SGYYWTTMESDCIKYARKCKKCQIYMDKIHVATSPLHILSSPWPFSLWGMDVIGPIDPKA 300
           SGYYWTTMESDCIKYARKCKKCQIYMDKIHVATSPLHILSSPWPFSLWGMDVIGPIDPKA
Sbjct: 384 SGYYWTTMESDCIKYARKCKKCQIYMDKIHVATSPLHILSSPWPFSLWGMDVIGPIDPKA 443

Query: 301 SNGHRFILVAIDYFIKCIEAASYCNVTKGVVLKFIKKELICRYGLP 346
           SNGHRFILVAIDYFIKCIEAASYCNVTKGVVLKFIKKELICRYGLP
Sbjct: 444 SNGHRFILVAIDYFIKCIEAASYCNVTKGVVLKFIKKELICRYGLP 489

[Close]

BLAST of IVF0003355 vs. NCBI nr
Match: KAA0067952.1 (uncharacterized protein E6C27_scaffold138G001360 [Cucumis melo var. makuwa])

HSP 1 Score: 705 bits (1820), Expect = 1.04e-246
Identity = 339/345 (98.26%), Postives = 340/345 (98.55%), Query Frame = 0


Query: 1   MLFDGASNELEHGIRVVLISPEGKLFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK 60
           MLFDGASNELEHGI VVLISPEGK+FPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK
Sbjct: 287 MLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK 346

Query: 61  LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT 120
           LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT
Sbjct: 347 LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT 406

Query: 121 LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY-ASETDKR 180
           LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY ASETDKR
Sbjct: 407 LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYEASETDKR 466

Query: 181 TIRRLAMNFFLSGEVLYKRNHNMVLLRCVDEEEAKQIMTNIHEGICGTHANGHMMARQIL 240
           TIRRLAMNFFLSGEVLYKRNHNMVLLRCVDEEEAKQIMTNIHEGICGTHANGHMMARQIL
Sbjct: 467 TIRRLAMNFFLSGEVLYKRNHNMVLLRCVDEEEAKQIMTNIHEGICGTHANGHMMARQIL 526

Query: 241 RSGYYWTTMESDCIKYARKCKKCQIYMDKIHVATSPLHILSSPWPFSLWGMDVIGPIDPK 300
           RSGYYWTTMESDCIKYARKCKKCQIYMDKIHVA SPLHILSSPWP SLWGMDVIGPIDPK
Sbjct: 527 RSGYYWTTMESDCIKYARKCKKCQIYMDKIHVAASPLHILSSPWPLSLWGMDVIGPIDPK 586

Query: 301 ASNGHRFILVAIDYFIKCIEAASYCNVTKGVVLKFIKKELICRYG 344
           ASNGHRFILVAIDYFIK IEAASYCNVTKGVVLKFIKKELICRYG
Sbjct: 587 ASNGHRFILVAIDYFIKWIEAASYCNVTKGVVLKFIKKELICRYG 631

[Close]

BLAST of IVF0003355 vs. NCBI nr
Match: KAA0036943.1 (uncharacterized protein E6C27_scaffold86G00190 [Cucumis melo var. makuwa])

HSP 1 Score: 677 bits (1747), Expect = 7.25e-243
Identity = 324/347 (93.37%), Postives = 334/347 (96.25%), Query Frame = 0


Query: 1   MLFDGASNELEHGIRVVLISPEGKLFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK 60
           MLFDGASNEL HGI VVLISPEGK+FPLT KLCFECTHNI EYEACIMGLQVACDMSIKK
Sbjct: 1   MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQVACDMSIKK 60

Query: 61  LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT 120
           LKVLGDSMLVIHQVKEEWETRDAKLVPY QYVTKLSQ FEKISF+HV +EDN+MADALAT
Sbjct: 61  LKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQKFEKISFDHVPREDNRMADALAT 120

Query: 121 LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY-ASETDKR 180
           LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY ASE DKR
Sbjct: 121 LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYEASENDKR 180

Query: 181 TIRRLAMNFFLSGEVLYKRNHNMVLLRCVDEEEAKQIMTNIHEGICGTHANGHMMARQIL 240
           TIRRLAMNFFLSGEVLYKRNH+MVLLRCVDEEEAKQIMT+I+EGICGTHANGHMMARQIL
Sbjct: 181 TIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQIL 240

Query: 241 RSGYYWTTMESDCIKYARKCKKCQIYMDKIHVATSPLHILSSPWPFSLWGMDVIGPIDPK 300
           RSGYYWTTMESDCIKYAR+CKKCQIYMDKIHVA S LHILS+PWPFSLWGMDVIGPIDPK
Sbjct: 241 RSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASSLHILSAPWPFSLWGMDVIGPIDPK 300

Query: 301 ASNGHRFILVAIDYFIKCIEAASYCNVTKGVVLKFIKKELICRYGLP 346
           ASNGHRFILVAIDYF K IEAASYCNVT+GVVLKFIKKELICRYGLP
Sbjct: 301 ASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLP 347

[Close]

BLAST of IVF0003355 vs. NCBI nr
Match: KAA0055609.1 (uncharacterized protein E6C27_scaffold222G00930 [Cucumis melo var. makuwa])

HSP 1 Score: 668 bits (1724), Expect = 1.54e-239
Identity = 320/347 (92.22%), Postives = 328/347 (94.52%), Query Frame = 0


Query: 1   MLFDGASNELEHGIRVVLISPEGKLFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK 60
           MLFDGASNEL HGI VVLISPEGK+FPLT KLCFECTHNI EYEACIMGLQVACDMSIKK
Sbjct: 25  MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQVACDMSIKK 84

Query: 61  LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT 120
           LKVLGDSMLVIHQVKEEWETRDAKLVPY QYVTKLSQNFEKI F+HV +E+NQMADALAT
Sbjct: 85  LKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKILFDHVPRENNQMADALAT 144

Query: 121 LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY-ASETDKR 180
           LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY ASE DKR
Sbjct: 145 LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYEASENDKR 204

Query: 181 TIRRLAMNFFLSGEVLYKRNHNMVLLRCVDEEEAKQIMTNIHEGICGTHANGHMMARQIL 240
            IRRL MNFFLSGEVLYKRNH+MVLLRCVDEEEAKQIMT+IHEGICGTHANGHMMARQIL
Sbjct: 205 AIRRLTMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIHEGICGTHANGHMMARQIL 264

Query: 241 RSGYYWTTMESDCIKYARKCKKCQIYMDKIHVATSPLHILSSPWPFSLWGMDVIGPIDPK 300
           RSGYYWTTMESDCIKYARKCKKCQIYMDKIHVA SPLHI S+ WPFSLWGMDVIG IDPK
Sbjct: 265 RSGYYWTTMESDCIKYARKCKKCQIYMDKIHVAASPLHIFSASWPFSLWGMDVIGSIDPK 324

Query: 301 ASNGHRFILVAIDYFIKCIEAASYCNVTKGVVLKFIKKELICRYGLP 346
           ASNGH FILVAIDYF K IE ASYCNVT+GVVLKFIKKELICRYGLP
Sbjct: 325 ASNGHPFILVAIDYFTKWIEVASYCNVTRGVVLKFIKKELICRYGLP 371

[Close]

BLAST of IVF0003355 vs. NCBI nr
Match: TYK24459.1 (uncharacterized protein E5676_scaffold717G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 671 bits (1731), Expect = 5.09e-235
Identity = 321/347 (92.51%), Postives = 329/347 (94.81%), Query Frame = 0


Query: 1   MLFDGASNELEHGIRVVLISPEGKLFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK 60
           MLFDGASNEL HGI VVLISPEGK+FPLT KLCFECTHNI EYEACIMGLQVACDMSIKK
Sbjct: 399 MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQVACDMSIKK 458

Query: 61  LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT 120
           LKVLGDSMLVIHQVKEEWETRDAKLVPY QYVTKLSQNFEKISF+HV +EDN+MADALAT
Sbjct: 459 LKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRMADALAT 518

Query: 121 LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY-ASETDKR 180
           LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY ASE DKR
Sbjct: 519 LAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYEASENDKR 578

Query: 181 TIRRLAMNFFLSGEVLYKRNHNMVLLRCVDEEEAKQIMTNIHEGICGTHANGHMMARQIL 240
            IRRL MNFFLSGEVLYKRNH+MVLLRCVDEEEAKQIMT+IHEGICGTHANGHMMARQIL
Sbjct: 579 AIRRLTMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIHEGICGTHANGHMMARQIL 638

Query: 241 RSGYYWTTMESDCIKYARKCKKCQIYMDKIHVATSPLHILSSPWPFSLWGMDVIGPIDPK 300
           RSGYYWTTMESDCIKYARKCKKCQIYMDKIHVA SPLHI S+ WPFSLWGMDVIG IDPK
Sbjct: 639 RSGYYWTTMESDCIKYARKCKKCQIYMDKIHVAASPLHIFSASWPFSLWGMDVIGSIDPK 698

Query: 301 ASNGHRFILVAIDYFIKCIEAASYCNVTKGVVLKFIKKELICRYGLP 346
           ASNGH FILVAIDYF K IE ASYCNVT+GVVLKFIKKELICRYGLP
Sbjct: 699 ASNGHPFILVAIDYFTKWIEVASYCNVTRGVVLKFIKKELICRYGLP 745

[Close]

BLAST of IVF0003355 vs. TAIR 10
Match: AT3G01410.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 8.0e-13
Identity = 41/123 (33.33%), Postives = 62/123 (50.41%), Query Frame = 0


Query: 3   FDGAS--NELEHGIRVVLISPEGKLFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK 62
           FDGAS  N  + G   VL + +  +     +     T+N+ EY A ++GL+ A D   K 
Sbjct: 159 FDGASKGNPGKAGAGAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLRSALDKGFKN 218

Query: 63  LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT 122
           + VLGDSMLV  QV+  W+T   K+    +   +L  +F+     H+ +E N  AD  A 
Sbjct: 219 VHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSEADKQAN 278

Query: 123 LAV 124
            A+
Sbjct: 279 SAI 281

[Close]

BLAST of IVF0003355 vs. TAIR 10
Match: AT3G01410.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 8.0e-13
Identity = 41/123 (33.33%), Postives = 62/123 (50.41%), Query Frame = 0


Query: 3   FDGAS--NELEHGIRVVLISPEGKLFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK 62
           FDGAS  N  + G   VL + +  +     +     T+N+ EY A ++GL+ A D   K 
Sbjct: 159 FDGASKGNPGKAGAGAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLRSALDKGFKN 218

Query: 63  LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT 122
           + VLGDSMLV  QV+  W+T   K+    +   +L  +F+     H+ +E N  AD  A 
Sbjct: 219 VHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSEADKQAN 278

Query: 123 LAV 124
            A+
Sbjct: 279 SAI 281

[Close]

BLAST of IVF0003355 vs. TAIR 10
Match: AT1G24090.1 (RNase H family protein )

HSP 1 Score: 63.5 bits (153), Expect = 3.7e-10
Identity = 43/123 (34.96%), Postives = 57/123 (46.34%), Query Frame = 0


Query: 3   FDGAS--NELEHGIRVVLISPEGKLFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK 62
           FDGAS  N    G   VL + +G L     +     T+N  EY A I+GL+ A +   K 
Sbjct: 221 FDGASKGNPGLSGAAAVLKTEDGSLICRVRQGLGIATNNAAEYHALILGLKYAIEKGYKN 280

Query: 63  LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT 122
           +KV GDS LV  Q+K +W+     L    +    L         +HVL+  N  AD  A 
Sbjct: 281 IKVKGDSKLVCMQIKGQWKVNHEVLAKLHKEAKLLCNKCVSFEISHVLRNLNADADEQAN 340

Query: 123 LAV 124
           LAV
Sbjct: 341 LAV 343

[Close]

BLAST of IVF0003355 vs. TAIR 10
Match: AT5G51080.1 (RNase H family protein )

HSP 1 Score: 56.6 bits (135), Expect = 4.6e-08
Identity = 40/122 (32.79%), Postives = 56/122 (45.90%), Query Frame = 0


Query: 3   FDGAS--NELEHGIRVVLISPEGKLFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK 62
           FDGAS  N    G   VL + +G L     +     T+N  EY   I+GL+ A +    K
Sbjct: 190 FDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHAIEKGYTK 249

Query: 63  LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT 122
           +KV  DS LV  Q+K +W+     L    +   +LS        +HVL+  N  AD  A 
Sbjct: 250 IKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISHVLRSLNSDADEQAN 309

[Close]

BLAST of IVF0003355 vs. TAIR 10
Match: AT5G51080.2 (RNase H family protein )

HSP 1 Score: 56.6 bits (135), Expect = 4.6e-08
Identity = 40/122 (32.79%), Postives = 56/122 (45.90%), Query Frame = 0


Query: 3   FDGAS--NELEHGIRVVLISPEGKLFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKK 62
           FDGAS  N    G   VL + +G L     +     T+N  EY   I+GL+ A +    K
Sbjct: 190 FDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHAIEKGYTK 249

Query: 63  LKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFNHVLKEDNQMADALAT 122
           +KV  DS LV  Q+K +W+     L    +   +LS        +HVL+  N  AD  A 
Sbjct: 250 IKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISHVLRSLNSDADEQAN 309

The following BLAST results are available for this feature:

BLAST of IVF0003355 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8K259	1.3e-12	27.62	Gypsy retrotransposon integrase-like protein 1 OS=Mus musculus OX=10090 GN=Gin1 ...	[more]

BLAST of IVF0003355 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DEM4	4.1e-206	100.00	RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7VHZ0	9.7e-200	98.26	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7T1X2	3.7e-191	93.37	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00190 ...	[more]
A0A5A7TRL7	2.4e-190	92.51	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00010...	[more]
A0A5D3DMD2	2.7e-189	92.51	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00160...	[more]

BLAST of IVF0003355 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK21789.1	1.14e-262	100.00	uncharacterized protein E5676_scaffold1721G00450 [Cucumis melo var. makuwa]	[more]
KAA0067952.1	1.04e-246	98.26	uncharacterized protein E6C27_scaffold138G001360 [Cucumis melo var. makuwa]	[more]
KAA0036943.1	7.25e-243	93.37	uncharacterized protein E6C27_scaffold86G00190 [Cucumis melo var. makuwa]	[more]
KAA0055609.1	1.54e-239	92.22	uncharacterized protein E6C27_scaffold222G00930 [Cucumis melo var. makuwa]	[more]
TYK24459.1	5.09e-235	92.51	uncharacterized protein E5676_scaffold717G00160 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0003355 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01410.1	8.0e-13	33.33	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G01410.2	8.0e-13	33.33	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G24090.1	3.7e-10	34.96	RNase H family protein	[more]
AT5G51080.1	4.6e-08	32.79	RNase H family protein	[more]
AT5G51080.2	4.6e-08	32.79	RNase H family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 278..346 e-value: 3.0E-12 score: 48.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..129 e-value: 4.0E-30 score: 106.5
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 208..265 e-value: 3.5E-8 score: 33.4
None	No IPR available	GENE3D	1.10.340.70		coord: 174..265 e-value: 2.9E-15 score: 58.3
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 1..315
None	No IPR available	PANTHER	PTHR24559:SF322	RNA-DIRECTED DNA POLYMERASE (REVERSE TRANSCRIPTASE), RIBONUCLEASE H-LIKE PROTEIN	coord: 1..315
None	No IPR available	CDD	cd09279	RNase_HI_like	coord: 1..122 e-value: 1.04732E-39 score: 134.908
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 3..122 e-value: 4.5E-21 score: 74.9
IPR002156	Ribonuclease H domain	PROSITE	PS50879	RNASE_H	coord: 1..124 score: 13.193008
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 280..346
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 2..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0003355.1	IVF0003355.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0030430	host cell cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0003676	nucleic acid binding