Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTAAATCCCCTATCCATTAGATTATCCAGAATCATCTTCTCCCTCCACTCTCTCTTTCCGAAACACAAATTTCATCCGAAAACCAATGCCGCAAAGACAGCAACAACAATCTGGAGGAATTCAATAATGGCGTTCATGCATCTTCATCATCACCTCCCTTCTCCATCTCTCTCATTTTCCAGATCTTCACTGCCGCTTTGCAGATCATCATCTCGTTTCTCTCCGCCGTCATCTCCATTTCCCTCCCAAAAATACACTGATTTCGGCGACCGCCTTCTTCATCTCCCCCAAAAATCTCTGAGTTTCGTGCTCTCTGGGGCTCTAGCGCTCGGCATAACCCTCTCCGGTAGTCATTCTTGCCTATTATCATCACGTTGATGAGAAAACAATGCTCAATTCGGTTTATGCTGATTCGAGTTTGAATTTTTAGGTTGTTATAAATTTGGATGTTGATACTCGTACTCTACCTTACTATAAAATTTTCATAATTTAATGAAATGCTAACAGTAATTCAGTGAGTAGGAGTTGGATTTGCTGATGCTAAAGTTGGGGTTAACAAACCGGAATTGCTTCCCAAGGAGTTCACCTCTGTCATTGATGTTGCTGGGTTTTTATCTGATGGCCAGGTATGGTTGGTTTGGCTTCATTATCTGATATAATTTTGGGTGTTTGATTCATGATCAAGTGGCCACTGCTGATTCTGATTTTCTGTGAAACAGGAAATTAGACTCAAACAAGAAATTGCTGACATTGAGAAGGATACTGGATATAAATTGCGAGTTTTGGCCCAAAATTATCCTGCGACTCCAGGTTTGTTCCATGTTTTATTGTCTTTGTCTGTCAGCAATTTCTTGTATAAAGGAGGATTAGATCACATTTCTCTCGTCTTTAATTCAGAGTTAAATGCACTCATAATATTCTTTTTATCTATGCATTAGAATTCTCTTTTGCGTGGTCTTACTAGAACGTTGAACGTCTAAGATTAGTTTATTTGGATAGAAACCACTAATCTAATCATCAGAAACAATCAATTTCATGATTTTTTTTTCAGGGCTGGCAGTAAAAGATTTTTGGCAAGTGGATGATAGGACAATCGTGTTTGTTGCTGATCCTACATTTGGTATGAACAGTGTTAGTATACTTTTCTCCTCCTATGCCTATGATGACATTGATTGATATCTTCATTCAGGTAACATATTGAACTTCAATGTTGGAGCGACGGTCGATTTAGACATTCCAAGGAGCTTTTGGAGCCGTTTGGCTGGAAAGTATGGAAACATTTTTTATTGGAAAGAGAAGGTAACATCTCCAATTGATACTTCTGTATAACAGTTACTGTTGTGAGCTTTTGCTTTGGTCACTGGTCAGGAAAATATGGTCACGATCATCATCTCATATGATCGCTCTGGTGACTTAAACAGGGTGAAGATTCGTCTATTGAATCAGCTGTTATGGCAATATCTAGTTGCTTGAGAGAACCCGTCGGCCCAAATAACTGTTCCGAGATAAAGTAAGAGCTTACAGCATCAAAGAATTCTGTTGTGTATTTTTAAACTTTATTTGTATGTTTTGACAGTGATACATGATATATAGTCTTCTCTTGCTACAACCTGCATAACTTAATTGTTTGTTTTTCTGATTCAAGAACTTAGCGTATGTCTATTACTTGAAAAAAATGGCAG
mRNA sequence
CCTAAATCCCCTATCCATTAGATTATCCAGAATCATCTTCTCCCTCCACTCTCTCTTTCCGAAACACAAATTTCATCCGAAAACCAATGCCGCAAAGACAGCAACAACAATCTGGAGGAATTCAATAATGGCGTTCATGCATCTTCATCATCACCTCCCTTCTCCATCTCTCTCATTTTCCAGATCTTCACTGCCGCTTTGCAGATCATCATCTCGTTTCTCTCCGCCGTCATCTCCATTTCCCTCCCAAAAATACACTGATTTCGGCGACCGCCTTCTTCATCTCCCCCAAAAATCTCTGAGTTTCGTGCTCTCTGGGGCTCTAGCGCTCGGCATAACCCTCTCCGGAGTTGGATTTGCTGATGCTAAAGTTGGGGTTAACAAACCGGAATTGCTTCCCAAGGAGTTCACCTCTGTCATTGATGTTGCTGGGTTTTTATCTGATGGCCAGGAAATTAGACTCAAACAAGAAATTGCTGACATTGAGAAGGATACTGGATATAAATTGCGAGTTTTGGCCCAAAATTATCCTGCGACTCCAGGGCTGGCAGTAAAAGATTTTTGGCAAGTGGATGATAGGACAATCGTGTTTGTTGCTGATCCTACATTTGGTAACATATTGAACTTCAATGTTGGAGCGACGGTCGATTTAGACATTCCAAGGAGCTTTTGGAGCCGTTTGGCTGGAAAGTATGGAAACATTTTTTATTGGAAAGAGAAGGGTGAAGATTCGTCTATTGAATCAGCTGTTATGGCAATATCTAGTTGCTTGAGAGAACCCGTCGGCCCAAATAACTGTTCCGAGATAAAGTAAGAGCTTACAGCATCAAAGAATTCTGTTGTGTATTTTTAAACTTTATTTGTATGTTTTGACAGTGATACATGATATATAGTCTTCTCTTGCTACAACCTGCATAACTTAATTGTTTGTTTTTCTGATTCAAGAACTTAGCGTATGTCTATTACTTGAAAAAAATGGCAG
Coding sequence (CDS)
ATGGCGTTCATGCATCTTCATCATCACCTCCCTTCTCCATCTCTCTCATTTTCCAGATCTTCACTGCCGCTTTGCAGATCATCATCTCGTTTCTCTCCGCCGTCATCTCCATTTCCCTCCCAAAAATACACTGATTTCGGCGACCGCCTTCTTCATCTCCCCCAAAAATCTCTGAGTTTCGTGCTCTCTGGGGCTCTAGCGCTCGGCATAACCCTCTCCGGAGTTGGATTTGCTGATGCTAAAGTTGGGGTTAACAAACCGGAATTGCTTCCCAAGGAGTTCACCTCTGTCATTGATGTTGCTGGGTTTTTATCTGATGGCCAGGAAATTAGACTCAAACAAGAAATTGCTGACATTGAGAAGGATACTGGATATAAATTGCGAGTTTTGGCCCAAAATTATCCTGCGACTCCAGGGCTGGCAGTAAAAGATTTTTGGCAAGTGGATGATAGGACAATCGTGTTTGTTGCTGATCCTACATTTGGTAACATATTGAACTTCAATGTTGGAGCGACGGTCGATTTAGACATTCCAAGGAGCTTTTGGAGCCGTTTGGCTGGAAAGTATGGAAACATTTTTTATTGGAAAGAGAAGGGTGAAGATTCGTCTATTGAATCAGCTGTTATGGCAATATCTAGTTGCTTGAGAGAACCCGTCGGCCCAAATAACTGTTCCGAGATAAAGTAA
Protein sequence
MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSFVLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK
Homology
BLAST of IVF0003095 vs. ExPASy Swiss-Prot
Match:
Q9LVV5 (Thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g52970 PE=1 SV=2)
HSP 1 Score: 316.2 bits (809), Expect = 3.0e-85
Identity = 158/201 (78.61%), Postives = 174/201 (86.57%), Query Frame = 0
Query: 28 SSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSFVLSGALALGITLSGVGFADAKVGVNKP 87
SSR SS + D + + KSLS V SGALALG++LSGVGFADAKVGVNKP
Sbjct: 23 SSREVSSSSRLSLKTSGDEENWVSRFRSKSLSLVFSGALALGLSLSGVGFADAKVGVNKP 82
Query: 88 ELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPATPGLAVKDFWQ 147
ELLPKEFTSVIDVA FLS+GQE R+ QEIA++EKDTG+KLRVLAQNYP TPGLA+KDFWQ
Sbjct: 83 ELLPKEFTSVIDVADFLSNGQEKRIAQEIANLEKDTGFKLRVLAQNYPVTPGLAIKDFWQ 142
Query: 148 VDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDSSIESA 207
VDD TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGN+FYWKEKGED+SIE+A
Sbjct: 143 VDDSTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDASIEAA 202
Query: 208 VMAISSCLREPVGPNNCSEIK 229
VMAISSCLREPVG NNC+EI+
Sbjct: 203 VMAISSCLREPVGRNNCAEIQ 223
BLAST of IVF0003095 vs. ExPASy TrEMBL
Match:
A0A1S3CH24 (thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500819 PE=4 SV=1)
HSP 1 Score: 458.8 bits (1179), Expect = 1.4e-125
Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = 0
Query: 1 MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF 60
MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPS+KYTDFGDRLLHLPQK LSF
Sbjct: 1 MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSKKYTDFGDRLLHLPQKPLSF 60
Query: 61 VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE
Sbjct: 61 VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
Query: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS
Sbjct: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
Query: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK 229
FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK
Sbjct: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK 228
BLAST of IVF0003095 vs. ExPASy TrEMBL
Match:
A0A0A0KH91 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G446440 PE=4 SV=1)
HSP 1 Score: 445.3 bits (1144), Expect = 1.6e-121
Identity = 220/228 (96.49%), Postives = 221/228 (96.93%), Query Frame = 0
Query: 1 MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF 60
MAFMHLHHHLPSPSLSFSR S PLCRSSSRFSPPSSP PSQKYTDF RLLHLPQKSLSF
Sbjct: 1 MAFMHLHHHLPSPSLSFSRPSPPLCRSSSRFSPPSSPLPSQKYTDFSHRLLHLPQKSLSF 60
Query: 61 VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE
Sbjct: 61 VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
Query: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
KDTGYKLRVLAQNYP TPGLA+KDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS
Sbjct: 121 KDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
Query: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK 229
FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVG NNCSEIK
Sbjct: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGANNCSEIK 228
BLAST of IVF0003095 vs. ExPASy TrEMBL
Match:
A0A5D3CAH5 (Thylakoid lumenal 15.0 kDa protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00230 PE=4 SV=1)
HSP 1 Score: 402.9 bits (1034), Expect = 8.9e-109
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0
Query: 1 MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF 60
MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF
Sbjct: 1 MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF 60
Query: 61 VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE
Sbjct: 61 VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
Query: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS
Sbjct: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
Query: 181 FWSRLAGKYGNIFYWKEK 199
FWSRLAGKYGNIFYWKEK
Sbjct: 181 FWSRLAGKYGNIFYWKEK 198
BLAST of IVF0003095 vs. ExPASy TrEMBL
Match:
A0A6J1EJL7 (thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111433197 PE=4 SV=1)
HSP 1 Score: 399.1 bits (1024), Expect = 1.3e-107
Identity = 198/232 (85.34%), Postives = 211/232 (90.95%), Query Frame = 0
Query: 1 MAFMHLHHHLPSPSLSFSRSSLPLCRSS----SRFSPPSSPFPSQKYTDFGDRLLHLPQK 60
MAFMHLHH LPSPSLSF +S P+ RSS SRFSPPS FPS K+TDF + LLHLP K
Sbjct: 1 MAFMHLHHRLPSPSLSFPGASPPVYRSSIFALSRFSPPSVSFPSHKFTDFTNCLLHLPPK 60
Query: 61 SLSFVLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEI 120
SLSF LS LALG+ LSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQE RLKQEI
Sbjct: 61 SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120
Query: 121 ADIEKDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLD 180
ADIEK+TGYKLRVLAQNYP TPGLA+KDFWQVDD+TIVFVADPTFGNILNFNVGA+VDLD
Sbjct: 121 ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180
Query: 181 IPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK 229
IPRSFWSRLAGKYGNIFYWKEKGE++SIE+AVMAIS+CLREPVGPNNCSEIK
Sbjct: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232
BLAST of IVF0003095 vs. ExPASy TrEMBL
Match:
A0A6J1IMV5 (thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111478838 PE=4 SV=1)
HSP 1 Score: 397.5 bits (1020), Expect = 3.7e-107
Identity = 198/232 (85.34%), Postives = 210/232 (90.52%), Query Frame = 0
Query: 1 MAFMHLHHHLPSPSLSFSRSSLPLCRS----SSRFSPPSSPFPSQKYTDFGDRLLHLPQK 60
MAFMHLHH LPSPSLSF +S P+ RS SSRFSPPS FPS K TDF + LLHLP K
Sbjct: 1 MAFMHLHHRLPSPSLSFPGASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK 60
Query: 61 SLSFVLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEI 120
SLSF LS LALG+ LSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQE RLKQEI
Sbjct: 61 SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120
Query: 121 ADIEKDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLD 180
ADIEKDTGYKLRVLAQN+P TPGLA+KDFWQVDD+TIVFVADPTFGNILNFNVGA+VDLD
Sbjct: 121 ADIEKDTGYKLRVLAQNFPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180
Query: 181 IPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK 229
IPRSFWSRLAGKYGNIFYWKEKGE++SIE+AVMAIS+CLREPVGPNNCSEIK
Sbjct: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232
BLAST of IVF0003095 vs. NCBI nr
Match:
XP_008462470.1 (PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Cucumis melo])
HSP 1 Score: 452 bits (1164), Expect = 2.03e-160
Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = 0
Query: 1 MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF 60
MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPS+KYTDFGDRLLHLPQK LSF
Sbjct: 1 MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSKKYTDFGDRLLHLPQKPLSF 60
Query: 61 VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE
Sbjct: 61 VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
Query: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS
Sbjct: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
Query: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK 228
FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK
Sbjct: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK 228
BLAST of IVF0003095 vs. NCBI nr
Match:
XP_004143269.1 (thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Cucumis sativus] >KGN48184.1 hypothetical protein Csa_003336 [Cucumis sativus])
HSP 1 Score: 439 bits (1129), Expect = 4.41e-155
Identity = 220/228 (96.49%), Postives = 221/228 (96.93%), Query Frame = 0
Query: 1 MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF 60
MAFMHLHHHLPSPSLSFSR S PLCRSSSRFSPPSSP PSQKYTDF RLLHLPQKSLSF
Sbjct: 1 MAFMHLHHHLPSPSLSFSRPSPPLCRSSSRFSPPSSPLPSQKYTDFSHRLLHLPQKSLSF 60
Query: 61 VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE
Sbjct: 61 VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
Query: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
KDTGYKLRVLAQNYP TPGLA+KDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS
Sbjct: 121 KDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
Query: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK 228
FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVG NNCSEIK
Sbjct: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGANNCSEIK 228
BLAST of IVF0003095 vs. NCBI nr
Match:
XP_038881208.1 (thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Benincasa hispida])
HSP 1 Score: 409 bits (1051), Expect = 3.42e-143
Identity = 205/228 (89.91%), Postives = 213/228 (93.42%), Query Frame = 0
Query: 1 MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF 60
MAFMHLHHHLPSPSLSF R S P+ RSS RFSPPS FPSQK TDF + LLH P+KSLSF
Sbjct: 1 MAFMHLHHHLPSPSLSFFRPSPPVFRSSFRFSPPSFSFPSQKCTDFSNWLLHFPKKSLSF 60
Query: 61 VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
SGALALGI LSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIA+IE
Sbjct: 61 AFSGALALGIALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIANIE 120
Query: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
KDTGYKLRVLAQNYP TPGLA+KDFW+VDDRTIVFVADPTFGNILNFNVGATVDLDIPRS
Sbjct: 121 KDTGYKLRVLAQNYPLTPGLAIKDFWKVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
Query: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK 228
FWSRLAGKYGNIFYWKEKGED+SIESAVMAIS+CLREPVGPNNCSEIK
Sbjct: 181 FWSRLAGKYGNIFYWKEKGEDASIESAVMAISNCLREPVGPNNCSEIK 228
BLAST of IVF0003095 vs. NCBI nr
Match:
KAA0063815.1 (thylakoid lumenal 15.0 kDa protein 2 [Cucumis melo var. makuwa] >TYK07309.1 thylakoid lumenal 15.0 kDa protein 2 [Cucumis melo var. makuwa])
HSP 1 Score: 397 bits (1019), Expect = 2.97e-138
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0
Query: 1 MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF 60
MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF
Sbjct: 1 MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF 60
Query: 61 VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE
Sbjct: 61 VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
Query: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS
Sbjct: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
Query: 181 FWSRLAGKYGNIFYWKEK 198
FWSRLAGKYGNIFYWKEK
Sbjct: 181 FWSRLAGKYGNIFYWKEK 198
BLAST of IVF0003095 vs. NCBI nr
Match:
KAG6604403.1 (Thylakoid lumenal 15.0 kDa protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 393 bits (1010), Expect = 6.99e-137
Identity = 199/232 (85.78%), Postives = 211/232 (90.95%), Query Frame = 0
Query: 1 MAFMHLHHHLPSPSLSFSRSSLPLCRSS----SRFSPPSSPFPSQKYTDFGDRLLHLPQK 60
MAFMHLHH LPSPSLSFS +S P+ RSS SRFSPPS FPS K TDF + LLHLP K
Sbjct: 1 MAFMHLHHRLPSPSLSFSGASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK 60
Query: 61 SLSFVLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEI 120
SLSF LS LALG+ LSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQE RLKQEI
Sbjct: 61 SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120
Query: 121 ADIEKDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLD 180
ADIEK+TGYKLRVLAQNYP TPGLA+KDFWQVDD+TIVFVADPTFGNILNFNVGA+VDLD
Sbjct: 121 ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180
Query: 181 IPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK 228
IPRSFWSRLAGKYGNIFYWKEKGE++SIE+AVMAIS+CLREPVGPNNCSEIK
Sbjct: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232
BLAST of IVF0003095 vs. TAIR 10
Match:
AT5G52970.1 (thylakoid lumen 15.0 kDa protein )
HSP 1 Score: 316.2 bits (809), Expect = 2.1e-86
Identity = 158/201 (78.61%), Postives = 174/201 (86.57%), Query Frame = 0
Query: 28 SSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSFVLSGALALGITLSGVGFADAKVGVNKP 87
SSR SS + D + + KSLS V SGALALG++LSGVGFADAKVGVNKP
Sbjct: 23 SSREVSSSSRLSLKTSGDEENWVSRFRSKSLSLVFSGALALGLSLSGVGFADAKVGVNKP 82
Query: 88 ELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPATPGLAVKDFWQ 147
ELLPKEFTSVIDVA FLS+GQE R+ QEIA++EKDTG+KLRVLAQNYP TPGLA+KDFWQ
Sbjct: 83 ELLPKEFTSVIDVADFLSNGQEKRIAQEIANLEKDTGFKLRVLAQNYPVTPGLAIKDFWQ 142
Query: 148 VDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDSSIESA 207
VDD TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGN+FYWKEKGED+SIE+A
Sbjct: 143 VDDSTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDASIEAA 202
Query: 208 VMAISSCLREPVGPNNCSEIK 229
VMAISSCLREPVG NNC+EI+
Sbjct: 203 VMAISSCLREPVGRNNCAEIQ 223
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LVV5 | 3.0e-85 | 78.61 | Thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Arabidopsis thaliana OX=3... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3CH24 | 1.4e-125 | 99.12 | thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=L... | [more] |
A0A0A0KH91 | 1.6e-121 | 96.49 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G446440 PE=4 SV=1 | [more] |
A0A5D3CAH5 | 8.9e-109 | 100.00 | Thylakoid lumenal 15.0 kDa protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
A0A6J1EJL7 | 1.3e-107 | 85.34 | thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like OS=Cucurbita moschata O... | [more] |
A0A6J1IMV5 | 3.7e-107 | 85.34 | thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like OS=Cucurbita maxima OX=... | [more] |
Match Name | E-value | Identity | Description | |
XP_008462470.1 | 2.03e-160 | 99.12 | PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Cucumis melo] | [more] |
XP_004143269.1 | 4.41e-155 | 96.49 | thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Cucumis sativus] >KGN48184.... | [more] |
XP_038881208.1 | 3.42e-143 | 89.91 | thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Benincasa hispida] | [more] |
KAA0063815.1 | 2.97e-138 | 100.00 | thylakoid lumenal 15.0 kDa protein 2 [Cucumis melo var. makuwa] >TYK07309.1 thyl... | [more] |
KAG6604403.1 | 6.99e-137 | 85.78 | Thylakoid lumenal 15.0 kDa protein 2, chloroplastic, partial [Cucurbita argyrosp... | [more] |
Match Name | E-value | Identity | Description | |
AT5G52970.1 | 2.1e-86 | 78.61 | thylakoid lumen 15.0 kDa protein | [more] |