IVF0003055 (gene) Melon (IVF77) v1

Overview


Name	IVF0003055
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ethylene-responsive transcription factor RAP2-11
Location	chr05: 167368 .. 168002 (-)
RNA-Seq Expression	IVF0003055
Synteny	IVF0003055

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGTTCAGTTGAAAAACAAGAGCGTAGAGATGTTGCATTTAAATTAGTAGGGAAATGCATCAAGAAGAGATCTGGTAAACGCAGCTTTGTTGGTGTCAGGCAAAGACCTTCTGGGAAATGGGTTGCAGAGATCAAAGACGCAACTCATGATATCAGAATGTGGTTGGGAACCTTCAACACAGCGGAGGAAGCTGCCAGAGCCTATGACGAAGCCGCCTGCCTCCTCCGTGGCTCGAATGCTAGAACCAACTTTACTCTCGCTTCCAACTCCTCCTCCACCCTCTCTTTCAAATCAGAAACCTTCTCATCCATAAGATCACTTTGAAACGAAGTTCTATCACTGAAACCCATGCCCATGTTGCTCATTCTGAAACAAACCAAGAAACACACATGTTTGATAATGATACAGTCTGGAACAGCTGCAATGGAGAAATTGAGGTGGGTTTTTGTCACTTCACCCATTCATGCTGCCATCTTCCTCTTGGGTTCAATTTTGATATGGATGAGTCTTTGTCTGCACCGAATGGAATCACTGAACATTTAGGAAATACATATGATGATGCCTTTGACACATCTTCTGCTCAACTTGATTATACCGATTTCTCTTCATTTTTCTTTGTACCAACCTGA

mRNA sequence

ATGGAGGGTTCAGTTGAAAAACAAGAGCGTAGAGATGTTGCATTTAAATTAGTAGGGAAATGCATCAAGAAGAGATCTGGTAAACGCAGCTTTGTTGGTGTCAGGCAAAGACCTTCTGGGAAATGGGTTGCAGAGATCAAAGACGCAACTCATGATATCAGAATGTGGTTGGGAACCTTCAACACAGCGGAGGAAGCTGCCAGAGCCTATGACGAAGCCGCCTGCCTCCTCCGTGGCTCGAATGCTAGAACCAACTTTACTCTCATCACTTTGAAACGAAGTTCTATCACTGAAACCCATGCCCATGTTGCTCATTCTGAAACAAACCAAGAAACACACATGTTTGATAATGATACAGTCTGGAACAGCTGCAATGGAGAAATTGAGGTGGGTTTTTGTCACTTCACCCATTCATGCTGCCATCTTCCTCTTGGGTTCAATTTTGATATGGATGAGTCTTTGTCTGCACCGAATGGAATCACTGAACATTTAGGAAATACATATGATGATGCCTTTGACACATCTTCTGCTCAACTTGATTATACCGATTTCTCTTCATTTTTCTTTGTACCAACCTGA

Coding sequence (CDS)

ATGGAGGGTTCAGTTGAAAAACAAGAGCGTAGAGATGTTGCATTTAAATTAGTAGGGAAATGCATCAAGAAGAGATCTGGTAAACGCAGCTTTGTTGGTGTCAGGCAAAGACCTTCTGGGAAATGGGTTGCAGAGATCAAAGACGCAACTCATGATATCAGAATGTGGTTGGGAACCTTCAACACAGCGGAGGAAGCTGCCAGAGCCTATGACGAAGCCGCCTGCCTCCTCCGTGGCTCGAATGCTAGAACCAACTTTACTCTCATCACTTTGAAACGAAGTTCTATCACTGAAACCCATGCCCATGTTGCTCATTCTGAAACAAACCAAGAAACACACATGTTTGATAATGATACAGTCTGGAACAGCTGCAATGGAGAAATTGAGGTGGGTTTTTGTCACTTCACCCATTCATGCTGCCATCTTCCTCTTGGGTTCAATTTTGATATGGATGAGTCTTTGTCTGCACCGAATGGAATCACTGAACATTTAGGAAATACATATGATGATGCCTTTGACACATCTTCTGCTCAACTTGATTATACCGATTTCTCTTCATTTTTCTTTGTACCAACCTGA

Protein sequence

MEGSVEKQERRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTFNTAEEAARAYDEAACLLRGSNARTNFTLITLKRSSITETHAHVAHSETNQETHMFDNDTVWNSCNGEIEVGFCHFTHSCCHLPLGFNFDMDESLSAPNGITEHLGNTYDDAFDTSSAQLDYTDFSSFFFVPT

Homology

[Close]

BLAST of IVF0003055 vs. ExPASy Swiss-Prot
Match: Q6J9S1 (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702 GN=RAP2-11 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-23
Identity = 53/64 (82.81%), Postives = 54/64 (84.38%), Query Frame = 0


Query: 23 KKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTFNTAEEAARAYDEAACLLRGSNA 82
          K +  K  FVGVRQRPSGKWVAEIKD T  IRMWLGTF TAEEAARAYDEAACLLRGSN 
Sbjct: 14 KSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNT 73

Query: 83 RTNF 87
          RTNF
Sbjct: 74 RTNF 77

[Close]

BLAST of IVF0003055 vs. ExPASy Swiss-Prot
Match: A0A1X9PY88 (Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN1 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.0e-22
Identity = 51/63 (80.95%), Postives = 53/63 (84.13%), Query Frame = 0


Query: 24 KRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTFNTAEEAARAYDEAACLLRGSNAR 83
          + S    FVGVRQRPSG+WVAEIKD T  IRMWLGTF TAEEAARAYDEAACLLRGSN R
Sbjct: 28 RNSNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTR 87

Query: 84 TNF 87
          TNF
Sbjct: 88 TNF 90

[Close]

BLAST of IVF0003055 vs. ExPASy Swiss-Prot
Match: A2Q5W1 (Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=ERN1 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 8.7e-22
Identity = 60/127 (47.24%), Postives = 74/127 (58.27%), Query Frame = 0


Query: 23  KKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTFNTAEEAARAYDEAACLLRGSNA 82
           +  +    FVGVRQRPSG+WVAEIKD T  IRMWLGTF TAEEAARAYDEAACLLRGSN 
Sbjct: 31  RNSNNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNT 90

Query: 83  RTNF---------------TLITLKRSSITETHAHVAHSETNQETHMFDNDTVW-NSCNG 134
           RTNF                L+  ++    +    VA + +N +T + +  T+  N  N 
Sbjct: 91  RTNFITHVSLDSPLASRIRNLLNNRKGDKKQEDGAVASAPSNSKTTISNTSTITSNDDNK 150

[Close]

BLAST of IVF0003055 vs. ExPASy Swiss-Prot
Match: A9Y0K8 (Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=ERN2 PE=1 SV=2)

HSP 1 Score: 99.8 bits (247), Expect = 3.7e-20
Identity = 49/64 (76.56%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 23 KKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTFNTAEEAARAYDEAACLLRGSNA 82
          KK   +  FVGVRQRPSG++VAEIKD T +IRMWLGTF TAEEAARAYDEAA LLRGS  
Sbjct: 25 KKSETRDKFVGVRQRPSGRYVAEIKDTTQNIRMWLGTFETAEEAARAYDEAATLLRGSKT 84

Query: 83 RTNF 87
          RTNF
Sbjct: 85 RTNF 88

[Close]

BLAST of IVF0003055 vs. ExPASy Swiss-Prot
Match: A9Y0K9 (Ethylene-responsive transcription factor ERN3 OS=Medicago truncatula OX=3880 GN=ERN3 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.1e-19
Identity = 45/60 (75.00%), Postives = 51/60 (85.00%), Query Frame = 0


Query: 28 KRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTFNTAEEAARAYDEAACLLRGSNARTNFT 87
          +  FVGVRQR SGKW AEIKD + +IRMWLGT+ TAEEAARAYDEAA LLRG+N RTNF+
Sbjct: 22 RSKFVGVRQRASGKWAAEIKDTSKNIRMWLGTYKTAEEAARAYDEAAFLLRGTNTRTNFS 81

[Close]

BLAST of IVF0003055 vs. ExPASy TrEMBL
Match: A0A5D3DDY8 (Ethylene-responsive transcription factor RAP2-11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G001050 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.1e-103
Identity = 192/211 (91.00%), Postives = 192/211 (91.00%), Query Frame = 0


Query: 1   MEGSVEKQERRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60
           MEGSVEKQERRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF
Sbjct: 1   MEGSVEKQERRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60

Query: 61  NTAEEAARAYDEAACLLRGSNARTNFTL-------------------ITLKRSSITETHA 120
           NTAEEAARAYDEAACLLRGSNARTNFTL                   ITLKRSSITETHA
Sbjct: 61  NTAEEAARAYDEAACLLRGSNARTNFTLASNSSSTLSFKIRNLLIHKITLKRSSITETHA 120

Query: 121 HVAHSETNQETHMFDNDTVWNSCNGEIEVGFCHFTHSCCHLPLGFNFDMDESLSAPNGIT 180
           HVAHSETNQETHMFDNDTVWNSCNGEIEVGFCHFTHSCCHLPLGFNFDMDESLSAPNGIT
Sbjct: 121 HVAHSETNQETHMFDNDTVWNSCNGEIEVGFCHFTHSCCHLPLGFNFDMDESLSAPNGIT 180

Query: 181 EHLGNTYDDAFDTSSAQLDYTDFSSFFFVPT 193
           EHLGNTYDDAFDTSSAQLDYTDFSSFFFVPT
Sbjct: 181 EHLGNTYDDAFDTSSAQLDYTDFSSFFFVPT 211

[Close]

BLAST of IVF0003055 vs. ExPASy TrEMBL
Match: A0A1S3BN65 (ethylene-responsive transcription factor RAP2-11 OS=Cucumis melo OX=3656 GN=LOC103491681 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.1e-103
Identity = 192/211 (91.00%), Postives = 192/211 (91.00%), Query Frame = 0


Query: 1   MEGSVEKQERRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60
           MEGSVEKQERRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF
Sbjct: 1   MEGSVEKQERRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60

Query: 61  NTAEEAARAYDEAACLLRGSNARTNFTL-------------------ITLKRSSITETHA 120
           NTAEEAARAYDEAACLLRGSNARTNFTL                   ITLKRSSITETHA
Sbjct: 61  NTAEEAARAYDEAACLLRGSNARTNFTLASNSSSTLSFKIRNLLIHKITLKRSSITETHA 120

Query: 121 HVAHSETNQETHMFDNDTVWNSCNGEIEVGFCHFTHSCCHLPLGFNFDMDESLSAPNGIT 180
           HVAHSETNQETHMFDNDTVWNSCNGEIEVGFCHFTHSCCHLPLGFNFDMDESLSAPNGIT
Sbjct: 121 HVAHSETNQETHMFDNDTVWNSCNGEIEVGFCHFTHSCCHLPLGFNFDMDESLSAPNGIT 180

Query: 181 EHLGNTYDDAFDTSSAQLDYTDFSSFFFVPT 193
           EHLGNTYDDAFDTSSAQLDYTDFSSFFFVPT
Sbjct: 181 EHLGNTYDDAFDTSSAQLDYTDFSSFFFVPT 211

[Close]

BLAST of IVF0003055 vs. ExPASy TrEMBL
Match: A0A0A0L1N6 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G268100 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.0e-94
Identity = 177/211 (83.89%), Postives = 182/211 (86.26%), Query Frame = 0


Query: 1   MEGSVEKQERRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60
           ME SVEKQE RDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF
Sbjct: 1   MESSVEKQEHRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60

Query: 61  NTAEEAARAYDEAACLLRGSNARTNFTL-------------------ITLKRSSITETHA 120
           NT EEAARAYDEAACLLRGSNARTNFTL                   ITLKRSSITETHA
Sbjct: 61  NTPEEAARAYDEAACLLRGSNARTNFTLASNSSSALSFKIRNLLIHKITLKRSSITETHA 120

Query: 121 HVAHSETNQETHMFDNDTVWNSCNGEIEVGFCHFTHSCCHLPLGFNFDMDESLSAPNGIT 180
           HVAHSETNQE HMFDN+ VW+SCNGEIEVGFCHFTHSCC LPLGFNFDMDESLSA NGIT
Sbjct: 121 HVAHSETNQEMHMFDNNAVWSSCNGEIEVGFCHFTHSCCDLPLGFNFDMDESLSALNGIT 180

Query: 181 EHLGNTYDDAFDTSSAQLDYTDFSSFFFVPT 193
           +HLGN YDDAFDT +A +DYTDFSSFFFVPT
Sbjct: 181 QHLGNAYDDAFDTPAAHIDYTDFSSFFFVPT 211

[Close]

BLAST of IVF0003055 vs. ExPASy TrEMBL
Match: A0A6J1JC79 (ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita maxima OX=3661 GN=LOC111483721 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 5.3e-38
Identity = 115/239 (48.12%), Postives = 138/239 (57.74%), Query Frame = 0


Query: 1   MEGSVEKQERRDVAF--KLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLG 60
           MEGSVEKQ+ ++V+     +GKC K RS +RSFVGVRQRPSGKWVAEIKD THDIRMWLG
Sbjct: 28  MEGSVEKQQHKEVSVSGSKIGKC-KDRSRRRSFVGVRQRPSGKWVAEIKDTTHDIRMWLG 87

Query: 61  TFNTAEEAARAYDEAACLLRGSNARTNFTL-------------------ITLKRSS---- 120
           TF TAEEAA AYDEAA LLRG+N RTNF                     I+LKRSS    
Sbjct: 88  TFKTAEEAATAYDEAARLLRGANTRTNFATHLKSTSALSFKIRNLLNQKISLKRSSSKTS 147

Query: 121 ------ITE---THAHVAHS-ETNQETH-MFDNDTVWNSCNGEIE-VGFCHFTHSCCHLP 175
                 ITE    H+ ++ S  TNQE H  FDN    ++C+GE+E +G   F+HS  HLP
Sbjct: 148 PTKLGPITEIEGAHSGLSFSTATNQEIHKTFDNADWSSACSGEVEALGLRQFSHSWWHLP 207

[Close]

BLAST of IVF0003055 vs. ExPASy TrEMBL
Match: A0A6J1FVD0 (ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita moschata OX=3662 GN=LOC111448784 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.5e-37
Identity = 116/239 (48.54%), Postives = 137/239 (57.32%), Query Frame = 0


Query: 1   MEGSVEKQERRDVAF--KLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLG 60
           MEGSVEKQ+ ++V+     VGKC K RS + SFVGVRQRPSGKWVAEIKD THDIRMWLG
Sbjct: 3   MEGSVEKQQHKEVSVSGSKVGKC-KDRSRRCSFVGVRQRPSGKWVAEIKDTTHDIRMWLG 62

Query: 61  TFNTAEEAARAYDEAACLLRGSNARTNFTL-------------------ITLKRSS---- 120
           TF TAEEAA AYDEAA LLRG+N RTNF                     I+LKRSS    
Sbjct: 63  TFKTAEEAATAYDEAARLLRGANTRTNFATHLKSTPALSFKIRNLLNQKISLKRSSSKTS 122

Query: 121 ------ITE---THAHVAHS-ETNQETH-MFDNDTVWNSCNGEIEV-GFCHFTHSCCHLP 175
                 ITE    H+ ++ S  TNQE H  FDN    ++C+GE+EV G   F+HS  HLP
Sbjct: 123 PTKLGPITEIEGAHSGLSFSTATNQEIHKTFDNADWSSACSGEVEVLGLRQFSHSWWHLP 182

[Close]

BLAST of IVF0003055 vs. NCBI nr
Match: XP_008449953.1 (PREDICTED: ethylene-responsive transcription factor RAP2-11 [Cucumis melo] >KAA0040108.1 ethylene-responsive transcription factor RAP2-11 [Cucumis melo var. makuwa] >TYK21733.1 ethylene-responsive transcription factor RAP2-11 [Cucumis melo var. makuwa])

HSP 1 Score: 384 bits (985), Expect = 4.98e-134
Identity = 192/211 (91.00%), Postives = 192/211 (91.00%), Query Frame = 0


Query: 1   MEGSVEKQERRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60
           MEGSVEKQERRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF
Sbjct: 1   MEGSVEKQERRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60

Query: 61  NTAEEAARAYDEAACLLRGSNARTNFTL-------------------ITLKRSSITETHA 120
           NTAEEAARAYDEAACLLRGSNARTNFTL                   ITLKRSSITETHA
Sbjct: 61  NTAEEAARAYDEAACLLRGSNARTNFTLASNSSSTLSFKIRNLLIHKITLKRSSITETHA 120

Query: 121 HVAHSETNQETHMFDNDTVWNSCNGEIEVGFCHFTHSCCHLPLGFNFDMDESLSAPNGIT 180
           HVAHSETNQETHMFDNDTVWNSCNGEIEVGFCHFTHSCCHLPLGFNFDMDESLSAPNGIT
Sbjct: 121 HVAHSETNQETHMFDNDTVWNSCNGEIEVGFCHFTHSCCHLPLGFNFDMDESLSAPNGIT 180

Query: 181 EHLGNTYDDAFDTSSAQLDYTDFSSFFFVPT 192
           EHLGNTYDDAFDTSSAQLDYTDFSSFFFVPT
Sbjct: 181 EHLGNTYDDAFDTSSAQLDYTDFSSFFFVPT 211

[Close]

BLAST of IVF0003055 vs. NCBI nr
Match: XP_004149659.1 (ethylene-responsive transcription factor ERN2 [Cucumis sativus])

HSP 1 Score: 353 bits (906), Expect = 5.49e-122
Identity = 177/211 (83.89%), Postives = 182/211 (86.26%), Query Frame = 0


Query: 1   MEGSVEKQERRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60
           ME SVEKQE RDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF
Sbjct: 1   MESSVEKQEHRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60

Query: 61  NTAEEAARAYDEAACLLRGSNARTNFTL-------------------ITLKRSSITETHA 120
           NT EEAARAYDEAACLLRGSNARTNFTL                   ITLKRSSITETHA
Sbjct: 61  NTPEEAARAYDEAACLLRGSNARTNFTLASNSSSALSFKIRNLLIHKITLKRSSITETHA 120

Query: 121 HVAHSETNQETHMFDNDTVWNSCNGEIEVGFCHFTHSCCHLPLGFNFDMDESLSAPNGIT 180
           HVAHSETNQE HMFDN+ VW+SCNGEIEVGFCHFTHSCC LPLGFNFDMDESLSA NGIT
Sbjct: 121 HVAHSETNQEMHMFDNNAVWSSCNGEIEVGFCHFTHSCCDLPLGFNFDMDESLSALNGIT 180

Query: 181 EHLGNTYDDAFDTSSAQLDYTDFSSFFFVPT 192
           +HLGN YDDAFDT +A +DYTDFSSFFFVPT
Sbjct: 181 QHLGNAYDDAFDTPAAHIDYTDFSSFFFVPT 211

[Close]

BLAST of IVF0003055 vs. NCBI nr
Match: KAE8649421.1 (hypothetical protein Csa_021681 [Cucumis sativus])

HSP 1 Score: 347 bits (889), Expect = 9.66e-119
Identity = 174/208 (83.65%), Postives = 179/208 (86.06%), Query Frame = 0


Query: 1   MEGSVEKQERRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60
           ME SVEKQE RDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF
Sbjct: 1   MESSVEKQEHRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60

Query: 61  NTAEEAARAYDEAACLLRGSNARTNFTL-------------------ITLKRSSITETHA 120
           NT EEAARAYDEAACLLRGSNARTNFTL                   ITLKRSSITETHA
Sbjct: 61  NTPEEAARAYDEAACLLRGSNARTNFTLASNSSSALSFKIRNLLIHKITLKRSSITETHA 120

Query: 121 HVAHSETNQETHMFDNDTVWNSCNGEIEVGFCHFTHSCCHLPLGFNFDMDESLSAPNGIT 180
           HVAHSETNQE HMFDN+ VW+SCNGEIEVGFCHFTHSCC LPLGFNFDMDESLSA NGIT
Sbjct: 121 HVAHSETNQEMHMFDNNAVWSSCNGEIEVGFCHFTHSCCDLPLGFNFDMDESLSALNGIT 180

Query: 181 EHLGNTYDDAFDTSSAQLDYTDFSSFFF 189
           +HLGN YDDAFDT +A +DYTDFSSFFF
Sbjct: 181 QHLGNAYDDAFDTPAAHIDYTDFSSFFF 208

[Close]

BLAST of IVF0003055 vs. NCBI nr
Match: XP_038902282.1 (ethylene-responsive transcription factor RAP2-11-like [Benincasa hispida])

HSP 1 Score: 240 bits (613), Expect = 1.49e-77
Identity = 130/200 (65.00%), Postives = 147/200 (73.50%), Query Frame = 0


Query: 1   MEGSVEKQERRDVAFKLVG-KCIKKRSGKR--SFVGVRQRPSGKWVAEIKDATHDIRMWL 60
           MEGSVEKQ+ +    KL G KC K RSGKR  SFVGVRQRPSGKWVAEIKD THDIRMWL
Sbjct: 1   MEGSVEKQDHK----KLPGAKCSKDRSGKRQRSFVGVRQRPSGKWVAEIKDTTHDIRMWL 60

Query: 61  GTFNTAEEAARAYDEAACLLRGSNARTNFTL-------------------ITLKRSSITE 120
           GTFNTAE AARAYDEAACL+RG NARTNFTL                   ITLKR++I  
Sbjct: 61  GTFNTAEAAARAYDEAACLIRGPNARTNFTLTSTSSSALSIKIRNLLIHKITLKRNAIKT 120

Query: 121 THAHVAHSETNQETHMFDNDTVWNSCNGEIEVGFCHFTHSCC-HLPLGFNFDMDESLSAP 177
                AHS T Q+ H+FDN+ +W++C G+ E+GFCH THSCC HLPLGFN DMDE LSA 
Sbjct: 121 P----AHSATVQDMHIFDNNALWSTCTGDFEMGFCHVTHSCCSHLPLGFNLDMDEPLSAL 180

[Close]

BLAST of IVF0003055 vs. NCBI nr
Match: XP_023512705.1 (ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pepo] >XP_023512706.1 ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167 bits (422), Expect = 5.55e-48
Identity = 117/241 (48.55%), Postives = 136/241 (56.43%), Query Frame = 0


Query: 1   MEGSVEKQERRDVAFK--LVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLG 60
           MEGSV+KQ+ ++V+     VGKC K RS +RSFVGVRQRPSGKWVAEIKD THDIRMWLG
Sbjct: 1   MEGSVKKQQHKEVSVSGSKVGKC-KDRSRRRSFVGVRQRPSGKWVAEIKDTTHDIRMWLG 60

Query: 61  TFNTAEEAARAYDEAACLLRGSNARTNFTL-------------------ITLKRSS---- 120
           TF TAEEAA AYDEAA LLRG+N RTNF                     I+LKRSS    
Sbjct: 61  TFKTAEEAATAYDEAARLLRGANTRTNFATHLKSTSALSFKIRNLLNQKISLKRSSSKTS 120

Query: 121 ------ITETHAHVAHS------ETNQETHM-FDNDTVWNSCNGEIEV-GFCHFTHSCCH 174
                 ITE     AHS       TNQE H  FDN    ++C+GE+EV G   F+HS  H
Sbjct: 121 PTKLGPITEIEG--AHSGLSCSTATNQEIHKTFDNADWSSACSGEVEVLGLRQFSHSWWH 180

[Close]

BLAST of IVF0003055 vs. TAIR 10
Match: AT5G19790.1 (related to AP2 11 )

HSP 1 Score: 111.3 bits (277), Expect = 8.6e-25
Identity = 53/64 (82.81%), Postives = 54/64 (84.38%), Query Frame = 0


Query: 23 KKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTFNTAEEAARAYDEAACLLRGSNA 82
          K +  K  FVGVRQRPSGKWVAEIKD T  IRMWLGTF TAEEAARAYDEAACLLRGSN 
Sbjct: 14 KSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNT 73

Query: 83 RTNF 87
          RTNF
Sbjct: 74 RTNF 77

[Close]

BLAST of IVF0003055 vs. TAIR 10
Match: AT4G23750.1 (cytokinin response factor 2 )

HSP 1 Score: 83.2 bits (204), Expect = 2.5e-16
Identity = 44/92 (47.83%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 3   GSVEKQERRDVAFKL------VGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMW 62
           G +E ++R+  A K       V       +G++ F GVRQRP GKW AEI+D    +R+W
Sbjct: 88  GQMESKKRQKRAVKSESTVSPVVSATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLW 147

Query: 63  LGTFNTAEEAARAYDEAACLLRGSNARTNFTL 89
           LGT+NTAEEAA  YD AA  LRG +A TNF++
Sbjct: 148 LGTYNTAEEAAMVYDNAAIQLRGPDALTNFSV 179

[Close]

BLAST of IVF0003055 vs. TAIR 10
Match: AT4G23750.2 (cytokinin response factor 2 )

HSP 1 Score: 83.2 bits (204), Expect = 2.5e-16
Identity = 44/92 (47.83%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 3   GSVEKQERRDVAFKL------VGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMW 62
           G +E ++R+  A K       V       +G++ F GVRQRP GKW AEI+D    +R+W
Sbjct: 88  GQMESKKRQKRAVKSESTVSPVVSATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLW 147

Query: 63  LGTFNTAEEAARAYDEAACLLRGSNARTNFTL 89
           LGT+NTAEEAA  YD AA  LRG +A TNF++
Sbjct: 148 LGTYNTAEEAAMVYDNAAIQLRGPDALTNFSV 179

[Close]

BLAST of IVF0003055 vs. TAIR 10
Match: AT1G53910.1 (related to AP2 12 )

HSP 1 Score: 82.4 bits (202), Expect = 4.3e-16
Identity = 40/71 (56.34%), Postives = 48/71 (67.61%), Query Frame = 0


Query: 25  RSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTFNTAEEAARAYDEAACLLRGSNART 84
           R  K  + G+RQRP GKW AEI+D     R+WLGTF TAEEAARAYD AA  +RGS A+ 
Sbjct: 119 RKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKV 178

Query: 85  NFTLITLKRSS 96
           NF    +K +S
Sbjct: 179 NFPEENMKANS 189

[Close]

BLAST of IVF0003055 vs. TAIR 10
Match: AT1G53910.2 (related to AP2 12 )

HSP 1 Score: 82.4 bits (202), Expect = 4.3e-16
Identity = 40/71 (56.34%), Postives = 48/71 (67.61%), Query Frame = 0


Query: 25  RSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTFNTAEEAARAYDEAACLLRGSNART 84
           R  K  + G+RQRP GKW AEI+D     R+WLGTF TAEEAARAYD AA  +RGS A+ 
Sbjct: 119 RKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKV 178

Query: 85  NFTLITLKRSS 96
           NF    +K +S
Sbjct: 179 NFPEENMKANS 189

The following BLAST results are available for this feature:

BLAST of IVF0003055 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6J9S1	1.2e-23	82.81	Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702...	[more]
A0A1X9PY88	1.0e-22	80.95	Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN...	[more]
A2Q5W1	8.7e-22	47.24	Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=...	[more]
A9Y0K8	3.7e-20	76.56	Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=...	[more]
A9Y0K9	4.1e-19	75.00	Ethylene-responsive transcription factor ERN3 OS=Medicago truncatula OX=3880 GN=...	[more]

BLAST of IVF0003055 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DDY8	2.1e-103	91.00	Ethylene-responsive transcription factor RAP2-11 OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BN65	2.1e-103	91.00	ethylene-responsive transcription factor RAP2-11 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0L1N6	3.0e-94	83.89	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G268100 PE=...	[more]
A0A6J1JC79	5.3e-38	48.12	ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1FVD0	1.5e-37	48.54	ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita moschata OX=3...	[more]

BLAST of IVF0003055 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449953.1	4.98e-134	91.00	PREDICTED: ethylene-responsive transcription factor RAP2-11 [Cucumis melo] >KAA0...	[more]
XP_004149659.1	5.49e-122	83.89	ethylene-responsive transcription factor ERN2 [Cucumis sativus]	[more]
KAE8649421.1	9.66e-119	83.65	hypothetical protein Csa_021681 [Cucumis sativus]	[more]
XP_038902282.1	1.49e-77	65.00	ethylene-responsive transcription factor RAP2-11-like [Benincasa hispida]	[more]
XP_023512705.1	5.55e-48	48.55	ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pep...	[more]

BLAST of IVF0003055 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19790.1	8.6e-25	82.81	related to AP2 11	[more]
AT4G23750.1	2.5e-16	47.83	cytokinin response factor 2	[more]
AT4G23750.2	2.5e-16	47.83	cytokinin response factor 2	[more]
AT1G53910.1	4.3e-16	56.34	related to AP2 12	[more]
AT1G53910.2	4.3e-16	56.34	related to AP2 12	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 31..42 score: 56.97 coord: 53..69 score: 69.52
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 30..93 e-value: 6.7E-34 score: 128.6
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 31..79 e-value: 6.3E-13 score: 48.7
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 30..87 score: 19.611769
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 31..86 e-value: 5.49406E-32 score: 108.128
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 30..88 e-value: 9.3E-23 score: 82.1
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 18..171
None	No IPR available	PANTHER	PTHR31194:SF90	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-11	coord: 18..171
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 31..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0003055.1	IVF0003055.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity