![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
IVF0002261 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATACAATTTTGAGTTATTTGGTGTTATTATTTATTGTTCTTCATCAGCAACATTTCTTCGTGGGAGCTGTTCTTCCACCAGCAATTGTTGATAAATGGCATATCCATGTGATCAATGGACTAAGCAATGGAAAATTAATGGCTCATTGTAAATCAAGAGATACTGATATTGGTGAACAATATATTGATCAGGCATCTCAAATTCAATGGAGTTTCAAGGAAAATGTTTTTGGATCAACTTTGTTTTGGTGCTTTGTGAGGAAACCAAATGGTAGTTTTGCCTCGTTCGATGTGTTTTGGCATGAAACTCAACATTATTGGCTTCACTATAGGTGCACTTTACAAGGAACTTGTTATTGGAATGTTAGAGATGATGGAATTTACTTGAGAAATATTCCAGATAGTACCGATGAAAAGATTCATAAATGGAATAAAGCATAG ATGCATACAATTTTGAGTTATTTGGTGTTATTATTTATTGTTCTTCATCAGCAACATTTCTTCGTGGGAGCTGTTCTTCCACCAGCAATTGTTGATAAATGGCATATCCATGTGATCAATGGACTAAGCAATGGAAAATTAATGGCTCATTGTAAATCAAGAGATACTGATATTGGTGAACAATATATTGATCAGGCATCTCAAATTCAATGGAGTTTCAAGGAAAATGTTTTTGGATCAACTTTGTTTTGGTGCTTTGTGAGGAAACCAAATGGTAGTTTTGCCTCGTTCGATGTGTTTTGGCATGAAACTCAACATTATTGGCTTCACTATAGGTGCACTTTACAAGGAACTTGTTATTGGAATGTTAGAGATGATGGAATTTACTTGAGAAATATTCCAGATAGTACCGATGAAAAGATTCATAAATGGAATAAAGCATAG ATGCATACAATTTTGAGTTATTTGGTGTTATTATTTATTGTTCTTCATCAGCAACATTTCTTCGTGGGAGCTGTTCTTCCACCAGCAATTGTTGATAAATGGCATATCCATGTGATCAATGGACTAAGCAATGGAAAATTAATGGCTCATTGTAAATCAAGAGATACTGATATTGGTGAACAATATATTGATCAGGCATCTCAAATTCAATGGAGTTTCAAGGAAAATGTTTTTGGATCAACTTTGTTTTGGTGCTTTGTGAGGAAACCAAATGGTAGTTTTGCCTCGTTCGATGTGTTTTGGCATGAAACTCAACATTATTGGCTTCACTATAGGTGCACTTTACAAGGAACTTGTTATTGGAATGTTAGAGATGATGGAATTTACTTGAGAAATATTCCAGATAGTACCGATGAAAAGATTCATAAATGGAATAAAGCATAG MHTILSYLVLLFIVLHQQHFFVGAVLPPAIVDKWHIHVINGLSNGKLMAHCKSRDTDIGEQYIDQASQIQWSFKENVFGSTLFWCFVRKPNGSFASFDVFWHETQHYWLHYRCTLQGTCYWNVRDDGIYLRNIPDSTDEKIHKWNKA Homology
BLAST of IVF0002261 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.6e-18 Identity = 47/133 (35.34%), Postives = 70/133 (52.63%), Query Frame = 0
BLAST of IVF0002261 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.9e-16 Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = 0
BLAST of IVF0002261 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 7.9e-07 Identity = 33/113 (29.20%), Postives = 53/113 (46.90%), Query Frame = 0
BLAST of IVF0002261 vs. ExPASy Swiss-Prot
Match: Q40975 (Self-incompatibility protein S1 OS=Papaver rhoeas OX=33128 GN=S1 PE=1 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 1.1e-05 Identity = 30/104 (28.85%), Postives = 51/104 (49.04%), Query Frame = 0
BLAST of IVF0002261 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.5e-05 Identity = 28/91 (30.77%), Postives = 44/91 (48.35%), Query Frame = 0
BLAST of IVF0002261 vs. ExPASy TrEMBL
Match: A0A6J1CQ65 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013561 PE=3 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 1.1e-48 Identity = 83/127 (65.35%), Postives = 101/127 (79.53%), Query Frame = 0
BLAST of IVF0002261 vs. ExPASy TrEMBL
Match: A0A6J1D5G6 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111017469 PE=3 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 1.1e-35 Identity = 69/113 (61.06%), Postives = 84/113 (74.34%), Query Frame = 0
BLAST of IVF0002261 vs. ExPASy TrEMBL
Match: A0A6J1H9E9 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111460817 PE=3 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 3.3e-32 Identity = 60/115 (52.17%), Postives = 79/115 (68.70%), Query Frame = 0
BLAST of IVF0002261 vs. ExPASy TrEMBL
Match: A0A6J1DPJ1 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111022329 PE=3 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 2.2e-31 Identity = 69/140 (49.29%), Postives = 93/140 (66.43%), Query Frame = 0
BLAST of IVF0002261 vs. ExPASy TrEMBL
Match: A0A5N6QHU0 (S-protein homolog OS=Carpinus fangiana OX=176857 GN=FH972_002530 PE=3 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 3.7e-31 Identity = 57/112 (50.89%), Postives = 79/112 (70.54%), Query Frame = 0
BLAST of IVF0002261 vs. NCBI nr
Match: KAE8646235.1 (hypothetical protein Csa_015792, partial [Cucumis sativus]) HSP 1 Score: 263 bits (671), Expect = 3.73e-88 Identity = 116/131 (88.55%), Postives = 123/131 (93.89%), Query Frame = 0
BLAST of IVF0002261 vs. NCBI nr
Match: XP_038896414.1 (S-protein homolog 1-like [Benincasa hispida]) HSP 1 Score: 260 bits (664), Expect = 8.55e-87 Identity = 113/147 (76.87%), Postives = 129/147 (87.76%), Query Frame = 0
BLAST of IVF0002261 vs. NCBI nr
Match: XP_022143724.1 (S-protein homolog 1-like [Momordica charantia]) HSP 1 Score: 201 bits (510), Expect = 2.04e-63 Identity = 83/127 (65.35%), Postives = 101/127 (79.53%), Query Frame = 0
BLAST of IVF0002261 vs. NCBI nr
Match: XP_038896407.1 (S-protein homolog 1-like [Benincasa hispida]) HSP 1 Score: 158 bits (399), Expect = 2.08e-46 Identity = 74/144 (51.39%), Postives = 96/144 (66.67%), Query Frame = 0
BLAST of IVF0002261 vs. NCBI nr
Match: XP_022148919.1 (S-protein homolog 1-like [Momordica charantia]) HSP 1 Score: 157 bits (398), Expect = 6.98e-46 Identity = 69/113 (61.06%), Postives = 84/113 (74.34%), Query Frame = 0
BLAST of IVF0002261 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 93.2 bits (230), Expect = 1.9e-19 Identity = 47/133 (35.34%), Postives = 70/133 (52.63%), Query Frame = 0
BLAST of IVF0002261 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 87.0 bits (214), Expect = 1.3e-17 Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = 0
BLAST of IVF0002261 vs. TAIR 10
Match: AT1G28305.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 60.1 bits (144), Expect = 1.8e-09 Identity = 34/115 (29.57%), Postives = 52/115 (45.22%), Query Frame = 0
BLAST of IVF0002261 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 55.1 bits (131), Expect = 5.6e-08 Identity = 33/113 (29.20%), Postives = 53/113 (46.90%), Query Frame = 0
BLAST of IVF0002261 vs. TAIR 10
Match: AT2G06090.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 51.6 bits (122), Expect = 6.2e-07 Identity = 38/136 (27.94%), Postives = 65/136 (47.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|