IVF0001746 (gene) Melon (IVF77) v1

Overview
NameIVF0001746
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr01: 4263770 .. 4264896 (+)
RNA-Seq ExpressionIVF0001746
SyntenyIVF0001746
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTATTAATAACATACATTTATAAACATATAAACATATGTTTTATTTCCATCTATCTTCGATTTCCCACTCTTCCGTACACATCAAATTCAATAATCAGAAAATTTAAATTTTCTTTTAATTTTTTTTCTTTTTAGAAAACCTCCTTATTTTTCTTTTTACTAAACCCTATTTCTCGCTCAGCCACTCTCTCCGTCTATTACTGCACCCTGCCCCGCCGACGCACTCCGTCCGCTCTGCCTGCCATCGGACGGCGCACTCACAGCTGCCGTAGCCTCAGCCTTCCGGCGAAGTCGTTGTTGTCCCCCCTCCATCTTACACTCTCGCCTCTTCCAGCAATCAGAGTTGCTTATATCTGTTTTTCATTCTTCTTAGAAGCACACTGCTTCAGCCCCTTATCATCGCCGCTGTCGCTCATTTTCAGATCACCAAGGTTTTTTTTTTCGCTTTATTTTGTTTTTTTGGGCTATGTTGGTTTATTCTATTCATCGACGGAGAAGAAAAATCAAGAACAATTTTTTTGGGGGTTGTTGATTGCTTCTTCAACCAATGTTTTCTAAATGAAATTATAAAGTTAAGAATTTTTATTAGAGGGAAAAAAGAGATTGAATCAAAAGGAGTAAGGAAAAAAAACATATCATTCCTATCCGTGTTAGTAAATAAAATGATAAAATGTTTAAGAAGATGAACAAAGAAAAAGAGAAAACTTAGTTTGTTTGGCTATTAAAAGACTTATTGGGATGGAAAGCTTGTATTGAAATTATTGTCATCAATTAAAACAAAATCAACATTGGATAAATAAACTAGAAAGATAACATTGAGTTTGTGTTTGATCGAATGACATCGAGTCTTCTTGAATATTGAAGAAACTATGAGTGGCTATGAACTGGCATATGGTGGTTTTTGTTGGACAGGCGTAAATTAAATTTATACATATATAAGAAAACCTTATGGGGAAGAATTGTAAACGGTGTGTGTTTATATATTATGGGGTAGAATTTTAAACAGGTGATACATATTAGTTTAAATCATTGTCATTTTTCAGACAATTGATTTCATTTTTTTGGGCATCCGAGCACACTGATTTATAATCCTTCCAAATTCAGGGGTTTCAAACAGGGGTTAA

mRNA sequence

ATGTTATTAATAACATACATTTATAAACATATAAACATATGTTTTATTTCCATCTATCTTCGATTTCCCACTCTTCCCCACTCTCTCCGTCTATTACTGCACCCTGCCCCGCCGACGCACTCCGTCCGCTCTCCTCAGCCTTCCGGCGAAGTCGTTGTTGTCCCCCCTCCATCTTACACTCTCGCCTCTTCCAGCAATCAGAGTTGCTTATATCTGTTTTTCATTCTTCTTAGAAGCACACTGCTTCAGCCCCTTATCATCGCCGCTGTCGCTCATTTTCAGATCACCAAGGTTTTTTTTTTCGCTTTATTTTGGGTTTCAAACAGGGGTTAA

Coding sequence (CDS)

ATGTTATTAATAACATACATTTATAAACATATAAACATATGTTTTATTTCCATCTATCTTCGATTTCCCACTCTTCCCCACTCTCTCCGTCTATTACTGCACCCTGCCCCGCCGACGCACTCCGTCCGCTCTCCTCAGCCTTCCGGCGAAGTCGTTGTTGTCCCCCCTCCATCTTACACTCTCGCCTCTTCCAGCAATCAGAGTTGCTTATATCTGTTTTTCATTCTTCTTAGAAGCACACTGCTTCAGCCCCTTATCATCGCCGCTGTCGCTCATTTTCAGATCACCAAGGTTTTTTTTTTCGCTTTATTTTGGGTTTCAAACAGGGGTTAA

Protein sequence

MLLITYIYKHINICFISIYLRFPTLPHSLRLLLHPAPPTHSVRSPQPSGEVVVVPPPSYTLASSSNQSCLYLFFILLRSTLLQPLIIAAVAHFQITKVFFFALFWVSNRG
Homology
[Close]
BLAST of IVF0001746 vs. ExPASy TrEMBL
Match: A0A0A0K125 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031560 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 7.3e-16
Identity = 58/103 (56.31%), Postives = 63/103 (61.17%), Query Frame = 0 

Query: 22  FPTLPHSLRLLLHPAPP--------------THSVRSPQPSGEVVVVPPPSYTLASSSNQ 81
           FPTLPHSLRLLL+P PP              T +  S      +   PPPSYTLASSSN 
Sbjct: 10  FPTLPHSLRLLLNPPPPAALPPLFLLPDGALTAAAASASAFRRIRCCPPPSYTLASSSNL 69

Query: 82  SCLYLFFILLRSTLLQPLIIAAVAHFQITKVFFFALFWVSNRG 111
           SCLYLFFILLRSTL+QPL+IAAVAHF            VSNRG
Sbjct: 70  SCLYLFFILLRSTLVQPLVIAAVAHFS----------GVSNRG 102

[Close]
BLAST of IVF0001746 vs. NCBI nr
Match: KGN43395.1 (hypothetical protein Csa_020426 [Cucumis sativus])

HSP 1 Score: 94.0 bits (232), Expect = 2.52e-22
Identity = 58/103 (56.31%), Postives = 63/103 (61.17%), Query Frame = 0 

Query: 22  FPTLPHSLRLLLHPAPP--------------THSVRSPQPSGEVVVVPPPSYTLASSSNQ 81
           FPTLPHSLRLLL+P PP              T +  S      +   PPPSYTLASSSN 
Sbjct: 10  FPTLPHSLRLLLNPPPPAALPPLFLLPDGALTAAAASASAFRRIRCCPPPSYTLASSSNL 69

Query: 82  SCLYLFFILLRSTLLQPLIIAAVAHFQITKVFFFALFWVSNRG 110
           SCLYLFFILLRSTL+QPL+IAAVAHF            VSNRG
Sbjct: 70  SCLYLFFILLRSTLVQPLVIAAVAHFS----------GVSNRG 102

The following BLAST results are available for this feature:
BLAST of IVF0001746 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0001746 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K1257.3e-1656.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031560 PE=4 SV=1[more]
BLAST of IVF0001746 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43395.12.52e-2256.31hypothetical protein Csa_020426 [Cucumis sativus][more]
BLAST of IVF0001746 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0001746.1IVF0001746.1mRNA