IVF0001716 (gene) Melon (IVF77) v1

Overview
NameIVF0001716
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon gag protein
Locationchr04: 22873865 .. 22874578 (-)
RNA-Seq ExpressionIVF0001716
SyntenyIVF0001716
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCAGCCAAGAGGATCATCACCATCATGTTCATCTTCTCACATATGTTGCAGCCGAGAGGATCTTCATCATCATGTTCATCTCACATATATTGCAGTCGAGAGGATCTTCATCATCATCTTCATCTCACATATGTTGCAGCCGAGAGGATCTTCATCATCATCTTCATCTCACATATGTTGCAGCCGAGAGGATCTTCATCATCATCTTCATCTCACATATGTTGCAGCTGAGAGGATCTTCATCATCATCTTCATCTCACATATGTTGCAGCCGAGAGGATCTTCTTCATCATCTTCATCTCACAAATGTTGCAGCCGAGAGGATCTTCATCATCATCTTCATCTCACAAATGTTGCAGCCGAGAGGATCTTCAGCATTATGTTCATCTTCTCACATATGTTGCAGCTGGGAGGATCTTCACCACCATCATCATCTTCAATGTGTTGCAACAGAGAGGATCATCATCTTCATCTTCAATGTGTTGTAGCGGAGGAAATCATCAACTTCATCTTCTCACAAATGTTGCGGCCGAGAAAATCATCATCTTCATCTTCTCATATATGTTACAGCCGAGAGGATCATCATCTTCATCTTCTCATATATGTTGCAGCCAAGAGGATCATCACCATCATGTTCATCTTCTCACATATGTTGCAGCCGAGAGGATCTTCATCATCATGTTCATCTTCTCACATATGTTGCAGCTGA

mRNA sequence

ATGTTGCAGCCAAGAGGATCATCACCATCATGTTCATCTTCTCACATATGTTGCAGCCGAGAGGATCTTCATCATCATGTTCATCTCACATATATTGCAGTCGAGAGGATCTTCATCATCATCTTCATCTCACATATGTTGCAGCCGAGAGGATCTTCATCATCATCTTCATCTCACATATGTTGCAGCCGAGAGGATCTTCATCATCATCTTCATCTCACATATGTTGCAGCTGAGAGGATCTTCATCATCATCTTCATCTCACATATGTTGCAGCCGAGAGGATCTTCTTCATCATCTTCATCTCACAAATGTTGCAGCCGAGAGGATCTTCATCATCATCTTCATCTCACAAATGTTGCAGCCGAGAGGATCTTCAGCATTATGTTCATCTTCTCACATATGTTGCAGCTGGGAGGATCTTCACCACCATCATCATCTTCAATGTGTTGCAACAGAGAGGATCATCATCTTCATCTTCAATGTGTTGTAGCGGAGGAAATCATCAACTTCATCTTCTCACAAATGTTGCGGCCGAGAAAATCATCATCTTCATCTTCTCATATATGTTACAGCCGAGAGGATCATCATCTTCATCTTCTCATATATGTTGCAGCCAAGAGGATCATCACCATCATGTTCATCTTCTCACATATGTTGCAGCCGAGAGGATCTTCATCATCATGTTCATCTTCTCACATATGTTGCAGCTGA

Coding sequence (CDS)

ATGTTGCAGCCAAGAGGATCATCACCATCATGTTCATCTTCTCACATATGTTGCAGCCGAGAGGATCTTCATCATCATGTTCATCTCACATATATTGCAGTCGAGAGGATCTTCATCATCATCTTCATCTCACATATGTTGCAGCCGAGAGGATCTTCATCATCATCTTCATCTCACATATGTTGCAGCCGAGAGGATCTTCATCATCATCTTCATCTCACATATGTTGCAGCTGAGAGGATCTTCATCATCATCTTCATCTCACATATGTTGCAGCCGAGAGGATCTTCTTCATCATCTTCATCTCACAAATGTTGCAGCCGAGAGGATCTTCATCATCATCTTCATCTCACAAATGTTGCAGCCGAGAGGATCTTCAGCATTATGTTCATCTTCTCACATATGTTGCAGCTGGGAGGATCTTCACCACCATCATCATCTTCAATGTGTTGCAACAGAGAGGATCATCATCTTCATCTTCAATGTGTTGTAGCGGAGGAAATCATCAACTTCATCTTCTCACAAATGTTGCGGCCGAGAAAATCATCATCTTCATCTTCTCATATATGTTACAGCCGAGAGGATCATCATCTTCATCTTCTCATATATGTTGCAGCCAAGAGGATCATCACCATCATGTTCATCTTCTCACATATGTTGCAGCCGAGAGGATCTTCATCATCATGTTCATCTTCTCACATATGTTGCAGCTGA

Protein sequence

MLQPRGSSPSCSSSHICCSREDLHHHVHLTYIAVERIFIIIFISHMLQPRGSSSSSSSHICCSREDLHHHLHLTYVAAERIFIIIFISHMLQPRGSSSSSSSHKCCSREDLHHHLHLTNVAAERIFSIMFIFSHMLQLGGSSPPSSSSMCCNREDHHLHLQCVVAEEIINFIFSQMLRPRKSSSSSSHICYSREDHHLHLLIYVAAKRIITIMFIFSHMLQPRGSSSSCSSSHICCS
Homology
BLAST of IVF0001716 vs. ExPASy TrEMBL
Match: A0A5A7TBX4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold121G00100 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 2.4e-56
Identity = 155/241 (64.32%), Postives = 179/241 (74.27%), Query Frame = 0

Query: 1   MLQPRGSSPSCSSSHICCSREDLHHHVHL-TYIAVERIFIIIFISHMLQPRGSSSSSSSH 60
           MLQ RGS  S SSSH+CCSRED  HH+HL T +A+ERI I IF SH+LQ +G SSS SSH
Sbjct: 151 MLQTRGS--SSSSSHMCCSRED--HHLHLFTCVAIERIIISIF-SHVLQLQG-SSSPSSH 210

Query: 61  ICCSREDLHHHLHL-TYVAAERIFIIIFISHMLQPRGSSSSSSSHKCCSREDLHHHLH-L 120
           + CSR+D  HHLHL T VA ERI I IF SH+LQ +G SSS SSH C S +D  HHLH L
Sbjct: 211 MYCSRKD--HHLHLFTCVAIERIIIFIF-SHVLQLQG-SSSPSSHMCYSCKD--HHLHLL 270

Query: 121 TNVAAERIFSIMFIFSHMLQLGGSSPPSSSSMCCNREDHHLH-LQCVVAEEIINFIFSQM 180
           T +A ERI  I F FSH+LQL GSS   SS +CC +EDHHLH L CV  + II FIFS +
Sbjct: 271 TCIAVERI--INFTFSHVLQLRGSS-SLSSHICCKQEDHHLHLLTCVADKRIIIFIFSHV 330

Query: 181 LRPRKSSSSSSHICYSREDHHLHLLIYVAAKRIITIMFIFSHMLQPRGSSSSCSSSHICC 238
           L+ R SSSSSSH+C SREDHHLHLL  VA ++I  I+FIFSH+LQ RGSSS  SSSH+CC
Sbjct: 331 LQTRGSSSSSSHMCCSREDHHLHLLTCVAVEKI--IIFIFSHVLQSRGSSS--SSSHMCC 372

BLAST of IVF0001716 vs. ExPASy TrEMBL
Match: A0A5D3BVC5 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00860 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 3.7e-41
Identity = 134/242 (55.37%), Postives = 157/242 (64.88%), Query Frame = 0

Query: 1   MLQPRGSSPSCSSSHICCSREDLHHHVH-LTYIAVERIFIIIFISHMLQPRGSSSSSSSH 60
           +LQPRGS  S SSSHICCSRED  HH+H LT +A ER FII   SH+LQ RG SSSSS H
Sbjct: 545 VLQPRGS--SSSSSHICCSRED--HHLHLLTCVAAER-FIIFIFSHVLQFRG-SSSSSFH 604

Query: 61  ICCSREDLHHHLHLTYVAAERIFIIIFISHMLQPRGSSSSSSSHKCCSREDLH------- 120
           IC SRE+LH +L  TY                     S SSSS  CCS++DLH       
Sbjct: 605 ICYSRENLHLNL-FTY------------------SKGSPSSSSPMCCSQKDLHLRFSQED 664

Query: 121 HHLH-LTNVAAERIFSIMFIFSHMLQLGGSSPPSSSSMCCNREDHHLH---LQCVVAEEI 180
           HHLH LT  AA+RI  I+FIF+ + Q G  S  SSS + C+RED HLH   L CV AE+I
Sbjct: 665 HHLHLLTCAAAKRI--IIFIFNLLQQRGSLS--SSSHIYCSREDLHLHFHLLTCVSAEKI 724

Query: 181 I--NFIFSQMLRPR--KSSSSSSHICYSREDHHLH--LLIYVAAKRIITIMFIFSHMLQP 225
           I   FIFS +L+PR   SSSSSSH+C SR+D HLH  LL  VAA+RII  +FIFSH+LQP
Sbjct: 725 IIFIFIFSHVLQPRGSSSSSSSSHMCCSRKDLHLHLYLLTCVAAERIIIFIFIFSHVLQP 757

BLAST of IVF0001716 vs. ExPASy TrEMBL
Match: A0A5A7U1J1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G001320 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 5.3e-40
Identity = 131/246 (53.25%), Postives = 149/246 (60.57%), Query Frame = 0

Query: 1   MLQPRGSSPSCSSSHICCSREDLH----------HHVHL-TYIAVERIFIIIFISHMLQP 60
           +LQPRGS  S SSSHICCSRE+ H          HH+HL T +AVERI I IF SHMLQ 
Sbjct: 60  VLQPRGS--SSSSSHICCSRENHHLHFSYVFREDHHLHLFTCVAVERIIIFIF-SHMLQS 119

Query: 61  RGSSSSSSSHICCSREDLHHHLHLTYVAAERIFIIIFI-SHMLQPRGSSSSSSSHKCCSR 120
           R SS SSS+   C  ++ HH   LT VA E+IFI  FI SH LQPRG  SS SS +  SR
Sbjct: 120 RESSFSSSN--MCYSQECHHLYLLTCVAVEKIFIFNFIFSHGLQPRGPYSSLSSMR--SR 179

Query: 121 EDLHHHLHLTNVAAERIFSIMFIFSHMLQLGGSSPPSSSSMCCNREDHHLHLQCV----- 180
           ED  HHLHL +VAAERI    FIF HMLQ  GSS  SSSSMCC++EDHHL LQC      
Sbjct: 180 ED--HHLHLQSVAAERI----FIFCHMLQPRGSS--SSSSMCCSQEDHHLRLQCCRNGED 239

Query: 181 ---------VAEEIINFIFSQMLRPRKSSSSSSHICYSREDHHLHLLIYVAAKRIITIMF 221
                      E II FIF+  +  +K SSSSS +  SR D HLHL    A   II I+ 
Sbjct: 240 HLHLRLQHDTTERIILFIFN--VAQQKRSSSSSSMWRSRNDRHLHLQCGAAETIIIFILN 288

BLAST of IVF0001716 vs. ExPASy TrEMBL
Match: A0A5A7V7A0 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001760 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 8.5e-30
Identity = 107/215 (49.77%), Postives = 134/215 (62.33%), Query Frame = 0

Query: 32  IAVERIFIIIFISHMLQPRGSSSSSSSHICCSREDLHHHLHLTYVAAERIFIIIFISHML 91
           +  +RIF  IF SH+LQ R   SSSSSH+ CS+EDLH HL L  VAAERIFI I IS+ML
Sbjct: 452 VVPKRIFFFIF-SHVLQLR-DLSSSSSHMYCSQEDLHLHL-LPCVAAERIFIFI-ISNML 511

Query: 92  QPRGSSSS---SSSHKCCSREDLHHHLHLTNVAAERIFSIMFIFSHMLQLGGSSPP--SS 151
           Q + SSS    SSS  CC R        L  VAAE+I  + ++ +  + +     P  SS
Sbjct: 512 QQKRSSSQQRMSSSQICCRRGG----CPLKYVAAEKIVVLKYVAAEKIVVSNMLQPRRSS 571

Query: 152 SSMCCNREDHHLHLQCVVAEEII----NFIFSQMLRPRKSSSSSSHICYSREDHHLHLLI 211
           S +C N+ED    L+ V A++I       + S ML+PR+SSS    +CYSREDHHLHLL 
Sbjct: 572 SKICYNQEDR--RLKYVAAKKIFVSTKKIVVSNMLQPRRSSSL---MCYSREDHHLHLLT 631

Query: 212 YVAAKRIITIMFIFSHMLQPRGSSSSCSSSHICCS 238
           YVA + I  I+FIFSH+LQPRGSS   S  H CC+
Sbjct: 632 YVAIEGI--IIFIFSHVLQPRGSS---SFFHTCCT 648

BLAST of IVF0001716 vs. ExPASy TrEMBL
Match: A0A5A7TUQ7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G001110 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 7.2e-29
Identity = 95/165 (57.58%), Postives = 109/165 (66.06%), Query Frame = 0

Query: 83  IIIFISHMLQPRGSSSSSSSHKCCSREDLHHHLHLTNVAAERIFSIMFIFSHMLQLGGSS 142
           II   SHMLQPRG SSSSSS+ CC+R+DLH    LT V+AERI  I+FIFSH+LQ  GS 
Sbjct: 84  IIFIFSHMLQPRG-SSSSSSYMCCNRKDLH---LLTYVSAERI--IIFIFSHVLQPRGSL 143

Query: 143 PPSSSSMCCNREDHHLHLQCVVA-EEIINFIFSQMLRPRKSSSSSSHI---------CYS 202
             SSSSMC N+EDHHLHL    A E I  FIFS ML+ R SSSSSSHI          + 
Sbjct: 144 --SSSSMCYNKEDHHLHLLTYAATERIFIFIFSHMLQLRDSSSSSSHIFERIFIFIFSHV 203

Query: 203 REDHHLHLLIYVAAKRIITIMFIFSHMLQPRGSSSSCSSSHICCS 238
            +   LHLL  V  +RI    FIFSH+LQP+GS    SSSH+CCS
Sbjct: 204 LQPEDLHLLTCVVVERI----FIFSHVLQPKGS----SSSHMCCS 232

BLAST of IVF0001716 vs. NCBI nr
Match: KAA0039121.1 (hypothetical protein E6C27_scaffold121G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 238 bits (608), Expect = 3.37e-71
Identity = 159/240 (66.25%), Postives = 179/240 (74.58%), Query Frame = 0

Query: 1   MLQPRGSSPSCSSSHICCSREDLHHHVHLTYIAVERIFIIIFISHMLQPRGSSSSSSSHI 60
           +LQPRGSS S  SS++C SRED H H+ LT +  ERI I IF SHMLQ RGSSSSSS H+
Sbjct: 110 VLQPRGSSSS--SSYMCYSREDDHLHL-LTCVTAERIIIFIF-SHMLQTRGSSSSSS-HM 169

Query: 61  CCSREDLHHHLHL-TYVAAERIFIIIFISHMLQPRGSSSSSSSHKCCSREDLHHHLHL-T 120
           CCSRED  HHLHL T VA ERI I IF SH+LQ +GSSS SS H  CSR+D  HHLHL T
Sbjct: 170 CCSRED--HHLHLFTCVAIERIIISIF-SHVLQLQGSSSPSS-HMYCSRKD--HHLHLFT 229

Query: 121 NVAAERIFSIMFIFSHMLQLGGSSPPSSSSMCCNREDHHLHL-QCVVAEEIINFIFSQML 180
            VA ERI  I+FIFSH+LQL GSS PSS  MC + +DHHLHL  C+  E IINF FS +L
Sbjct: 230 CVAIERI--IIFIFSHVLQLQGSSSPSSH-MCYSCKDHHLHLLTCIAVERIINFTFSHVL 289

Query: 181 RPRKSSSSSSHICYSREDHHLHLLIYVAAKRIITIMFIFSHMLQPRGSSSSCSSSHICCS 237
           + R SSS SSHIC  +EDHHLHLL  VA KRII  +FIFSH+LQ RGSSSS  SSH+CCS
Sbjct: 290 QLRGSSSLSSHICCKQEDHHLHLLTCVADKRII--IFIFSHVLQTRGSSSS--SSHMCCS 331

BLAST of IVF0001716 vs. NCBI nr
Match: KAA0047505.1 (hypothetical protein E6C27_scaffold498G001320 [Cucumis melo var. makuwa])

HSP 1 Score: 177 bits (450), Expect = 2.01e-50
Identity = 131/247 (53.04%), Postives = 149/247 (60.32%), Query Frame = 0

Query: 1   MLQPRGSSPSCSSSHICCSREDLH----------HHVHL-TYIAVERIFIIIFISHMLQP 60
           +LQPRGSS S  SSHICCSRE+ H          HH+HL T +AVERI I IF SHMLQ 
Sbjct: 60  VLQPRGSSSS--SSHICCSRENHHLHFSYVFREDHHLHLFTCVAVERIIIFIF-SHMLQS 119

Query: 61  RGSSSSSSSHICCSREDLHHHLHLTYVAAERIFIIIFI-SHMLQPRGSSSSSSSHKCCSR 120
           R SS SSS+   C  ++ HH   LT VA E+IFI  FI SH LQPRG  SS SS +  SR
Sbjct: 120 RESSFSSSN--MCYSQECHHLYLLTCVAVEKIFIFNFIFSHGLQPRGPYSSLSSMR--SR 179

Query: 121 EDLHHHLHLTNVAAERIFSIMFIFSHMLQLGGSSPPSSSSMCCNREDHHLHLQCV----- 180
           ED  HHLHL +VAAERIF    IF HMLQ  GSS  SSSSMCC++EDHHL LQC      
Sbjct: 180 ED--HHLHLQSVAAERIF----IFCHMLQPRGSS--SSSSMCCSQEDHHLRLQCCRNGED 239

Query: 181 ---------VAEEIINFIFSQMLRPRKSSSSSSHICYSREDHHLHLLIYVAAKRIITIMF 221
                      E II FIF+  +  +K SSSSS +  SR D HLHL    A   II I+ 
Sbjct: 240 HLHLRLQHDTTERIILFIFN--VAQQKRSSSSSSMWRSRNDRHLHLQCGAAETIIIFILN 289

BLAST of IVF0001716 vs. NCBI nr
Match: TYK02186.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 181 bits (459), Expect = 1.16e-48
Identity = 135/242 (55.79%), Postives = 159/242 (65.70%), Query Frame = 0

Query: 1   MLQPRGSSPSCSSSHICCSREDLHHHVHL-TYIAVERIFIIIFISHMLQPRGSSSSSSSH 60
           +LQPRGSS S  SSHICCSRED  HH+HL T +A ER  I IF SH+LQ RGSSSSS  H
Sbjct: 545 VLQPRGSSSS--SSHICCSRED--HHLHLLTCVAAERFIIFIF-SHVLQFRGSSSSSF-H 604

Query: 61  ICCSREDLHHHLHLTYVAAERIFIIIFISHMLQPRGSSSSSSSHKCCSREDLH------- 120
           IC SRE+LH +L  TY                  +GS SSSS   CCS++DLH       
Sbjct: 605 ICYSRENLHLNL-FTY-----------------SKGSPSSSSP-MCCSQKDLHLRFSQED 664

Query: 121 HHLHL-TNVAAERIFSIMFIFSHMLQLGGSSPPSSSSMCCNREDHHLH---LQCVVAEEI 180
           HHLHL T  AA+RI  I+FIF+ + Q G  S  SSS + C+RED HLH   L CV AE+I
Sbjct: 665 HHLHLLTCAAAKRI--IIFIFNLLQQRGSLS--SSSHIYCSREDLHLHFHLLTCVSAEKI 724

Query: 181 INFIF--SQMLRPR--KSSSSSSHICYSREDHHLHL--LIYVAAKRIITIMFIFSHMLQP 224
           I FIF  S +L+PR   SSSSSSH+C SR+D HLHL  L  VAA+RII  +FIFSH+LQP
Sbjct: 725 IIFIFIFSHVLQPRGSSSSSSSSHMCCSRKDLHLHLYLLTCVAAERIIIFIFIFSHVLQP 757

BLAST of IVF0001716 vs. NCBI nr
Match: KAA0045115.1 (hypothetical protein E6C27_scaffold30G001110 [Cucumis melo var. makuwa])

HSP 1 Score: 139 bits (350), Expect = 1.13e-36
Identity = 108/205 (52.68%), Postives = 125/205 (60.98%), Query Frame = 0

Query: 34  VERIFIIIFISHMLQPRGSSSSSSSHICCSREDLHHHLHLTYVAAERIFIIIFISHMLQP 93
           VE+I  I   SHMLQPRGSSSSSS ++CC+R+DLH    LTYV+AERI I IF SH+LQP
Sbjct: 81  VEKIIFIF--SHMLQPRGSSSSSS-YMCCNRKDLHL---LTYVSAERIIIFIF-SHVLQP 140

Query: 94  RGSSSSSSSHKCCSREDLHHHLHL-TNVAAERIFSIMFIFSHMLQLGGSSPPSSSSMCCN 153
           RGS SSSS   C ++ED  HHLHL T  A ERIF  +FIFSHMLQL  SS  SS      
Sbjct: 141 RGSLSSSSM--CYNKED--HHLHLLTYAATERIF--IFIFSHMLQLRDSSSSSSH----- 200

Query: 154 REDHHLHLQCVVAEEIINFIFSQMLRPRKSSSSSSHICYSREDHHLHLLIYVAAKRIITI 213
                      + E I  FIFS +L+P              ED  LHLL  V  +RI   
Sbjct: 201 -----------IFERIFIFIFSHVLQP--------------ED--LHLLTCVVVERI--- 232

Query: 214 MFIFSHMLQPRGSSSSCSSSHICCS 237
            FIFSH+LQP+GSSSS    H+CCS
Sbjct: 261 -FIFSHVLQPKGSSSS----HMCCS 232

BLAST of IVF0001716 vs. NCBI nr
Match: KAA0033278.1 (hypothetical protein E6C27_scaffold845G00800 [Cucumis melo var. makuwa])

HSP 1 Score: 139 bits (350), Expect = 4.50e-36
Identity = 114/230 (49.57%), Postives = 132/230 (57.39%), Query Frame = 0

Query: 4   PRGSSPS---CSSSHICC----SREDLHHHVHLTYIAVERIFIIIFISHMLQPRGSSSSS 63
           PRGSS S   C   H+C     SREDLHH   L  +AVERIFI IF S MLQPRGSS SS
Sbjct: 66  PRGSSSSSSMCCHLHLCLQCEHSREDLHH---LPCVAVERIFIFIF-SLMLQPRGSSFSS 125

Query: 64  SSHICCSREDLHHHLHLTYVAAERIFIIIFISHMLQPRGSSSSSSSHK---CCSREDLHH 123
           S  +CCS++D H H HL  VAA++IFI IF SH+ + RGSSSSSSS     CC       
Sbjct: 126 S--MCCSQKDNHLHFHLQCVAAKKIFIFIF-SHVFRLRGSSSSSSSLSSPICC------- 185

Query: 124 HLHLTNVAAERIFSIMFIFSHMLQLGGSSPPSSSSMCCNREDHHLHLQCVVAEEIINFIF 183
                    ERI  I+FIF H  Q   SS  SSS + C+R+ H LHL C  AE +I FIF
Sbjct: 186 --------MERI--IIFIF-HAAQQRRSS--SSSFLRCSRDGHRLHLSCGAAETVIVFIF 245

Query: 184 SQMLRPRKSSSSSSHICYSREDHHLHLLIYVAAKRIITIMFIFSHMLQPR 223
               + R  SSSSS +  SR+ H LHL    A      I+FIF H  Q R
Sbjct: 246 HAAQQRR--SSSSSFMRRSRDGHRLHLPCGAAET---VIVFIF-HAAQQR 262

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TBX42.4e-5664.32Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BVC53.7e-4155.37Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5A7U1J15.3e-4053.25Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7V7A08.5e-3049.77Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5A7TUQ77.2e-2957.58Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0039121.13.37e-7166.25hypothetical protein E6C27_scaffold121G00100 [Cucumis melo var. makuwa][more]
KAA0047505.12.01e-5053.04hypothetical protein E6C27_scaffold498G001320 [Cucumis melo var. makuwa][more]
TYK02186.11.16e-4855.79retrotransposon gag protein [Cucumis melo var. makuwa][more]
KAA0045115.11.13e-3652.68hypothetical protein E6C27_scaffold30G001110 [Cucumis melo var. makuwa][more]
KAA0033278.14.50e-3649.57hypothetical protein E6C27_scaffold845G00800 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0001716.2IVF0001716.2mRNA