IVF0001695 (gene) Melon (IVF77) v1

Overview


Name	IVF0001695
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	light-regulated protein-like
Location	chr06: 12803842 .. 12805821 (-)
RNA-Seq Expression	IVF0001695
Synteny	IVF0001695

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCAGTGTATTCTATATAAAGAGTTAATTATAACTTACTTATGCTCATTCAAATCTCAAAACCTTATTTACAACATATCATCAAAATTCAAAATGCAGGCCGCTGTTCTTAGCATTGCTGTTCCTTCCCTTCTTCCCAGCTCAACACTTTCCAATAGTAGCCATTCTCATTTCCCTTTCATCACATTTGGTTCTAACTCATCACGTCGCTCGGCCATCAAAGCAACCGCCTCGGTCGTCTATGACACGTCTGTAGTTGATTATAGCTCTGCTATCTCGTAAGTTATTTTCTCTTGCAACCTTAGCTTCTGTTTTGTATTGAAATTAAATTTGAAAGCACTACACCAAACTCCTCGATTAAGTTATATCTTTCCATATTGGATCTTGACCTTATACATTTAATACATAAGTGAAACTACTCGGACTCATTTGACATCTTTTAACTGCAAGAAATTATTAAATACAAAATTGAAAATCATTGACTTAATTATTAGACAAATATGAAAACTTATGGTTTTGATGGTGCCATAAAATGTGAATAAAAGTGTATTCTTGTAATCTACGAGGTTTTAAACGTTGTTGTCGACGAAAATATCAAAGTTTCAATTATGTGGAAATATTAAAAGATAATATTAAAAAATATAAAGTGGAATAAATATTACCGTTTTAAAATAAGTTTAAATATCGAAGAAAACATCCATTTTTACTCTAAACTTACTCAAAGTTTTATCCTCCTAACTCATAATTCAATTTTAACTGATTCATTCATTAATCGTAAATTATTTTTACTCATAGTTGCAATGAAATAATTTATAAAAGAAAAAGTTTGACCAACGTCAGAATTCATAAATTTCAAAAATTAAAAGAATCTCTCACGTTGTCTTTCTCTAAAGAAATTATCGATTTCATATACATATTGTATGATTTTATTATTTTATATGTATGAAACAACTTTTTTCTATTGATATTTAATTAGAAGTTCAATTTATTACTTAAAAATCTCTATAATCTAAAATGGATACAATCTGACAAATTTGGAATTAAAATGGATCTTTTTTCCAATGTTTTATCGTTAACATAATTAGGTTTAAAAGAAAATTTTATATTTTTGGTTGTATAATTCCATCATTGGTATGTTATAATGAAAATATTTGATTATGTCTTATGGTGATGTCAAACTTATCAAAAACATAAAATATGATGAAGATTTAATAAATTTAAGTTGGTTGAATTGATAGTTTTAAATTTTCACCGGCATCTTGATATATATATATATATTTTTTCTGTTTTAACAAATTTGATGAGAAGATGAGGAATGAAATGATGTATTTTTTTTTATTTCTTTATGGTATGAAGGTGGATATTTTAAGAATATTTTGATGAAGGTTGTATATGGTATGAGAACAGGGTGTTTCCAGCAGAAGCATGTGAGACAATAGGTGGAGAGGCATGTTGTTGGGCAAATATGTTTCCAGAAGTAAGGCTTCAGCCTTCACTTAACAATAATCAAAACCCCGCCGTTGCAAATTTGGAGGAGATTGATAGAGAGTATCTTGATTATGCCGCCGATTCAAAGACGTAACTCACTTATTTTTTCTTTTTCTTTTTCATTATCCTCCAAACTTCGAACCATACTATAATATAATCATCTATATGAACAACAAGCCTTTTATTATTTCAATATTCAAAATCTAACTCACATCACAACAATATCTTTATCATGTATTTCAAAATGCAGTGTTTTCCGAGGAGAGGCTTGCGATGATCTTGGTGGAGAATTCTGTGAAGCTGAGTTCCTAAATGGGGTTTTCTAGTCTTTTTATTTTATAACAAACACAAAAATAAAATACTAGAGGCTTCTTAGTTGTTGTTTGATTAGCCCCCATATGCCCATATCATAGCTTCTCTAATTGTAACTTTAAGTCTGTAACATCCTTTTCACTATTCTCTATAAATAATAATGCTTAAATGTTTTAGCTA

mRNA sequence

CTCCAGTGTATTCTATATAAAGAGTTAATTATAACTTACTTATGCTCATTCAAATCTCAAAACCTTATTTACAACATATCATCAAAATTCAAAATGCAGGCCGCTGTTCTTAGCATTGCTGTTCCTTCCCTTCTTCCCAGCTCAACACTTTCCAATAGTAGCCATTCTCATTTCCCTTTCATCACATTTGGTTCTAACTCATCACGTCGCTCGGCCATCAAAGCAACCGCCTCGGTCGTCTATGACACGTCTGTAGTTGATTATAGCTCTGCTATCTCGGTGTTTCCAGCAGAAGCATGTGAGACAATAGGTGGAGAGGCATGTTGTTGGGCAAATATGTTTCCAGAAGTAAGGCTTCAGCCTTCACTTAACAATAATCAAAACCCCGCCGTTGCAAATTTGGAGGAGATTGATAGAGAGTATCTTGATTATGCCGCCGATTCAAAGACTGTTTTCCGAGGAGAGGCTTGCGATGATCTTGGTGGAGAATTCTGTGAAGCTGAGTTCCTAAATGGGGTTTTCTAGTCTTTTTATTTTATAACAAACACAAAAATAAAATACTAGAGGCTTCTTAGTTGTTGTTTGATTAGCCCCCATATGCCCATATCATAGCTTCTCTAATTGTAACTTTAAGTCTGTAACATCCTTTTCACTATTCTCTATAAATAATAATGCTTAAATGTTTTAGCTA

Coding sequence (CDS)

ATGCAGGCCGCTGTTCTTAGCATTGCTGTTCCTTCCCTTCTTCCCAGCTCAACACTTTCCAATAGTAGCCATTCTCATTTCCCTTTCATCACATTTGGTTCTAACTCATCACGTCGCTCGGCCATCAAAGCAACCGCCTCGGTCGTCTATGACACGTCTGTAGTTGATTATAGCTCTGCTATCTCGGTGTTTCCAGCAGAAGCATGTGAGACAATAGGTGGAGAGGCATGTTGTTGGGCAAATATGTTTCCAGAAGTAAGGCTTCAGCCTTCACTTAACAATAATCAAAACCCCGCCGTTGCAAATTTGGAGGAGATTGATAGAGAGTATCTTGATTATGCCGCCGATTCAAAGACTGTTTTCCGAGGAGAGGCTTGCGATGATCTTGGTGGAGAATTCTGTGAAGCTGAGTTCCTAAATGGGGTTTTCTAG

Protein sequence

MQAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF

Homology

[Close]

BLAST of IVF0001695 vs. ExPASy Swiss-Prot
Match: Q03200 (Light-regulated protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=LIR1 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-16
Identity = 62/140 (44.29%), Postives = 81/140 (57.86%), Query Frame = 0


Query: 1   MQAAVLS-IAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIK---ATASVVYDTSVVD 60
           MQ A  S + + ++LP++    S     P         RR A++   A A+V  + + VD
Sbjct: 1   MQTAASSVVGLSAVLPAAVKGRSLQIQAP---------RRVALRVRAAAAAVAVEAAEVD 60

Query: 61  YSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAAD 120
           YSS ISVFP EAC+ IGGEAC    M+PE +L  S     + A A  EE+DR+YL Y  +
Sbjct: 61  YSSNISVFPMEACDLIGGEACN-VQMYPEAKLSSSAAVAVSRAAA--EEVDRDYLSY-DE 120

Query: 121 SKTVFRGEACDDLGGEFCEA 137
             TVF  EACDDLGGEFC+A
Sbjct: 121 PTTVFPEEACDDLGGEFCKA 127

[Close]

BLAST of IVF0001695 vs. ExPASy Swiss-Prot
Match: Q96500 (Light-regulated protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIR1 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.1e-16
Identity = 61/128 (47.66%), Postives = 80/128 (62.50%), Query Frame = 0


Query: 14  LPSSTLSNSSHSHFPFITFGS--NSSRRSAIKATASVVYDTSVVDYSSAI-SVFPAEACE 73
           LPSS  S       P  T  S  +S R +   +++S+  D + VDY+S+I SVFPAEACE
Sbjct: 15  LPSSVSSPKLTFLLPHATKASRLSSLRSNNSSSSSSLTSDPNTVDYNSSILSVFPAEACE 74

Query: 74  TIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVFRGEACDDLG 133
            I G AC  A+++PEV+L        +  VA+ E +DREY +Y +  KTVFR EACDDLG
Sbjct: 75  VISGYACS-ADIYPEVKLD---TKPVSRPVAS-EPVDREYEEYNS-PKTVFREEACDDLG 134

Query: 134 GEFCEAEF 139
           GEFCE +F
Sbjct: 135 GEFCEPDF 136

[Close]

BLAST of IVF0001695 vs. ExPASy TrEMBL
Match: A0A5A7VMP8 (Light-regulated protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00270 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 6.4e-73
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MQAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSA 60
           MQAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSA
Sbjct: 1   MQAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSA 60

Query: 61  ISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTV 120
           ISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTV
Sbjct: 61  ISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTV 120

Query: 121 FRGEACDDLGGEFCEAEFLNGVF 144
           FRGEACDDLGGEFCEAEFLNGVF
Sbjct: 121 FRGEACDDLGGEFCEAEFLNGVF 143

[Close]

BLAST of IVF0001695 vs. ExPASy TrEMBL
Match: A0A1S3BND3 (light-regulated protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491736 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.6e-71
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 2   QAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAI 61
           QAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSR SAIKATASVVYDTSVVDYSSAI
Sbjct: 21  QAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATASVVYDTSVVDYSSAI 80

Query: 62  SVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVF 121
           SVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVF
Sbjct: 81  SVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVF 140

Query: 122 RGEACDDLGGEFCEAEFLNGVF 144
           RGEACDDLGGEFCEAEFLNGVF
Sbjct: 141 RGEACDDLGGEFCEAEFLNGVF 162

[Close]

BLAST of IVF0001695 vs. ExPASy TrEMBL
Match: A0A1S4DXW1 (light-regulated protein isoform X3 OS=Cucumis melo OX=3656 GN=LOC103491736 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 3.5e-71
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 2   QAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAI 61
           +AAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSR SAIKATASVVYDTSVVDYSSAI
Sbjct: 15  EAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATASVVYDTSVVDYSSAI 74

Query: 62  SVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVF 121
           SVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVF
Sbjct: 75  SVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVF 134

Query: 122 RGEACDDLGGEFCEAEFLNGVF 144
           RGEACDDLGGEFCEAEFLNGVF
Sbjct: 135 RGEACDDLGGEFCEAEFLNGVF 156

[Close]

BLAST of IVF0001695 vs. ExPASy TrEMBL
Match: A0A0A0L8G9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G598910 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.6e-55
Identity = 120/140 (85.71%), Postives = 126/140 (90.00%), Query Frame = 0


Query: 4   AVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISV 63
           AVLSIAVPSLLPSSTLS++  SHFP ITF S+SSRRS+IKATASVVYDTSVVDYSSAISV
Sbjct: 20  AVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISV 79

Query: 64  FPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVFRG 123
           FPAEACETIGGEAC W NMFPEVRLQ +  NNQNP VA+ EEIDREYLDY ADSKTVF G
Sbjct: 80  FPAEACETIGGEACGWENMFPEVRLQQASLNNQNP-VASSEEIDREYLDY-ADSKTVFPG 139

Query: 124 EACDDLGGEFCEAEFLNGVF 144
           EACDDLGGEFCE EFLNGVF
Sbjct: 140 EACDDLGGEFCEPEFLNGVF 157

[Close]

BLAST of IVF0001695 vs. ExPASy TrEMBL
Match: C9E9F1 (GA-like protein (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.3e-54
Identity = 119/139 (85.61%), Postives = 125/139 (89.93%), Query Frame = 0


Query: 5   VLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVF 64
           VLSIAVPSLLPSSTLS++  SHFP ITF S+SSRRS+IKATASVVYDTSVVDYSSAISVF
Sbjct: 1   VLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVF 60

Query: 65  PAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVFRGE 124
           PAEACETIGGEAC W NMFPEVRLQ +  NNQNP VA+ EEIDREYLDY ADSKTVF GE
Sbjct: 61  PAEACETIGGEACGWENMFPEVRLQQASLNNQNP-VASSEEIDREYLDY-ADSKTVFPGE 120

Query: 125 ACDDLGGEFCEAEFLNGVF 144
           ACDDLGGEFCE EFLNGVF
Sbjct: 121 ACDDLGGEFCEPEFLNGVF 137

[Close]

BLAST of IVF0001695 vs. NCBI nr
Match: KAA0066931.1 (light-regulated protein isoform X2 [Cucumis melo var. makuwa] >TYK30213.1 light-regulated protein isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 283 bits (724), Expect = 3.92e-96
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MQAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSA 60
           MQAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSA
Sbjct: 1   MQAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSA 60

Query: 61  ISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTV 120
           ISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTV
Sbjct: 61  ISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTV 120

Query: 121 FRGEACDDLGGEFCEAEFLNGVF 143
           FRGEACDDLGGEFCEAEFLNGVF
Sbjct: 121 FRGEACDDLGGEFCEAEFLNGVF 143

[Close]

BLAST of IVF0001695 vs. NCBI nr
Match: XP_008450019.2 (PREDICTED: light-regulated protein isoform X2 [Cucumis melo])

HSP 1 Score: 278 bits (712), Expect = 5.07e-94
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 2   QAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAI 61
           QAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSR SAIKATASVVYDTSVVDYSSAI
Sbjct: 21  QAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATASVVYDTSVVDYSSAI 80

Query: 62  SVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVF 121
           SVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVF
Sbjct: 81  SVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVF 140

Query: 122 RGEACDDLGGEFCEAEFLNGVF 143
           RGEACDDLGGEFCEAEFLNGVF
Sbjct: 141 RGEACDDLGGEFCEAEFLNGVF 162

[Close]

BLAST of IVF0001695 vs. NCBI nr
Match: XP_016900821.1 (PREDICTED: light-regulated protein isoform X3 [Cucumis melo] >XP_016900822.1 PREDICTED: light-regulated protein isoform X3 [Cucumis melo])

HSP 1 Score: 277 bits (709), Expect = 1.18e-93
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 2   QAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAI 61
           +AAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSR SAIKATASVVYDTSVVDYSSAI
Sbjct: 15  EAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATASVVYDTSVVDYSSAI 74

Query: 62  SVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVF 121
           SVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVF
Sbjct: 75  SVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVF 134

Query: 122 RGEACDDLGGEFCEAEFLNGVF 143
           RGEACDDLGGEFCEAEFLNGVF
Sbjct: 135 RGEACDDLGGEFCEAEFLNGVF 156

[Close]

BLAST of IVF0001695 vs. NCBI nr
Match: XP_004145699.2 (light-regulated protein, chloroplastic [Cucumis sativus])

HSP 1 Score: 224 bits (571), Expect = 1.32e-72
Identity = 120/140 (85.71%), Postives = 126/140 (90.00%), Query Frame = 0


Query: 4   AVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISV 63
           AVLSIAVPSLLPSSTLS++  SHFP ITF S+SSRRS+IKATASVVYDTSVVDYSSAISV
Sbjct: 20  AVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISV 79

Query: 64  FPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVFRG 123
           FPAEACETIGGEAC W NMFPEVRLQ +  NNQNP VA+ EEIDREYLDYA DSKTVF G
Sbjct: 80  FPAEACETIGGEACGWENMFPEVRLQQASLNNQNP-VASSEEIDREYLDYA-DSKTVFPG 139

Query: 124 EACDDLGGEFCEAEFLNGVF 143
           EACDDLGGEFCE EFLNGVF
Sbjct: 140 EACDDLGGEFCEPEFLNGVF 157

[Close]

BLAST of IVF0001695 vs. NCBI nr
Match: ACV88397.1 (GA-like protein, partial [Cucumis sativus])

HSP 1 Score: 223 bits (568), Expect = 1.96e-72
Identity = 119/139 (85.61%), Postives = 125/139 (89.93%), Query Frame = 0


Query: 5   VLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAISVF 64
           VLSIAVPSLLPSSTLS++  SHFP ITF S+SSRRS+IKATASVVYDTSVVDYSSAISVF
Sbjct: 1   VLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVF 60

Query: 65  PAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVFRGE 124
           PAEACETIGGEAC W NMFPEVRLQ +  NNQNP VA+ EEIDREYLDYA DSKTVF GE
Sbjct: 61  PAEACETIGGEACGWENMFPEVRLQQASLNNQNP-VASSEEIDREYLDYA-DSKTVFPGE 120

Query: 125 ACDDLGGEFCEAEFLNGVF 143
           ACDDLGGEFCE EFLNGVF
Sbjct: 121 ACDDLGGEFCEPEFLNGVF 137

[Close]

BLAST of IVF0001695 vs. TAIR 10
Match: AT3G26740.1 (CCR-like )

HSP 1 Score: 86.3 bits (212), Expect = 2.2e-17
Identity = 61/128 (47.66%), Postives = 80/128 (62.50%), Query Frame = 0


Query: 14  LPSSTLSNSSHSHFPFITFGS--NSSRRSAIKATASVVYDTSVVDYSSAI-SVFPAEACE 73
           LPSS  S       P  T  S  +S R +   +++S+  D + VDY+S+I SVFPAEACE
Sbjct: 15  LPSSVSSPKLTFLLPHATKASRLSSLRSNNSSSSSSLTSDPNTVDYNSSILSVFPAEACE 74

Query: 74  TIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVFRGEACDDLG 133
            I G AC  A+++PEV+L        +  VA+ E +DREY +Y +  KTVFR EACDDLG
Sbjct: 75  VISGYACS-ADIYPEVKLD---TKPVSRPVAS-EPVDREYEEYNS-PKTVFREEACDDLG 134

Query: 134 GEFCEAEF 139
           GEFCE +F
Sbjct: 135 GEFCEPDF 136

The following BLAST results are available for this feature:

BLAST of IVF0001695 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q03200	1.1e-16	44.29	Light-regulated protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q96500	3.1e-16	47.66	Light-regulated protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIR1...	[more]

BLAST of IVF0001695 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VMP8	6.4e-73	100.00	Light-regulated protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BND3	1.6e-71	99.30	light-regulated protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491736 PE=4 ...	[more]
A0A1S4DXW1	3.5e-71	98.59	light-regulated protein isoform X3 OS=Cucumis melo OX=3656 GN=LOC103491736 PE=4 ...	[more]
A0A0A0L8G9	4.6e-55	85.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G598910 PE=4 SV=1	[more]
C9E9F1	1.3e-54	85.61	GA-like protein (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1	[more]

BLAST of IVF0001695 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0066931.1	3.92e-96	100.00	light-regulated protein isoform X2 [Cucumis melo var. makuwa] >TYK30213.1 light-...	[more]
XP_008450019.2	5.07e-94	99.30	PREDICTED: light-regulated protein isoform X2 [Cucumis melo]	[more]
XP_016900821.1	1.18e-93	98.59	PREDICTED: light-regulated protein isoform X3 [Cucumis melo] >XP_016900822.1 PRE...	[more]
XP_004145699.2	1.32e-72	85.71	light-regulated protein, chloroplastic [Cucumis sativus]	[more]
ACV88397.1	1.96e-72	85.61	GA-like protein, partial [Cucumis sativus]	[more]

BLAST of IVF0001695 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26740.1	2.2e-17	47.66	CCR-like	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009856	Light regulated Lir1	PFAM	PF07207	Lir1	coord: 1..136 e-value: 1.6E-44 score: 151.4
IPR009856	Light regulated Lir1	PANTHER	PTHR36762	LIGHT-REGULATED PROTEIN 1, CHLOROPLASTIC	coord: 1..143
None	No IPR available	PANTHER	PTHR36762:SF3	LIGHT-REGULATED PROTEIN	coord: 1..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0001695.2	IVF0001695.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast