IVF0001360 (gene) Melon (IVF77) v1

Overview
NameIVF0001360
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTranspos_assoc domain-containing protein
Locationchr05: 10870961 .. 10871353 (-)
RNA-Seq ExpressionIVF0001360
SyntenyIVF0001360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGGAGGAAGAATGTTCAATAAAGAGTGAGTACATCTGAATAGGTACAACAACATAATAATTTATTAGAATACCAATAATAAGAATTAGTTTTCCATTTTTAAATGATGAACATTTACATCTTTTTCTAGAGCCACAGACGAGTATATGAAAGGTGCATGGGAGTTTGTGGAGAAAATAAAGAAGGATGCAACGGATGTGGATTTGATTATGTGCCCTTGCAAGGATTGTAGAAACATGAGTCATCAATCATTTGATGTTGTTTATGAGCATTTAGTAGTTAAGGGAATTGACCCAACATATAAGATTTGGTACCATCATGGGGAGGAAGTTTGTGTAAGGGAAGAAATTGAGGATGTAGATATGTTTGATGTATTTAACATGTATTAG

mRNA sequence

ATGTTTGGAGGAAGAATGTTCAATAAAGAAGCCACAGACGAGTATATGAAAGGTGCATGGGAGTTTGTGGAGAAAATAAAGAAGGATGCAACGGATGTGGATTTGATTATGTGCCCTTGCAAGGATTGTAGAAACATGAGTCATCAATCATTTGATGTTGTTTATGAGCATTTAGTAGTTAAGGGAATTGACCCAACATATAAGATTTGGTACCATCATGGGGAGGAAGTTTGTGTAAGGGAAGAAATTGAGGATGTAGATATGTTTGATGTATTTAACATGTATTAG

Coding sequence (CDS)

ATGTTTGGAGGAAGAATGTTCAATAAAGAAGCCACAGACGAGTATATGAAAGGTGCATGGGAGTTTGTGGAGAAAATAAAGAAGGATGCAACGGATGTGGATTTGATTATGTGCCCTTGCAAGGATTGTAGAAACATGAGTCATCAATCATTTGATGTTGTTTATGAGCATTTAGTAGTTAAGGGAATTGACCCAACATATAAGATTTGGTACCATCATGGGGAGGAAGTTTGTGTAAGGGAAGAAATTGAGGATGTAGATATGTTTGATGTATTTAACATGTATTAG

Protein sequence

MFGGRMFNKEATDEYMKGAWEFVEKIKKDATDVDLIMCPCKDCRNMSHQSFDVVYEHLVVKGIDPTYKIWYHHGEEVCVREEIEDVDMFDVFNMY
Homology
BLAST of IVF0001360 vs. ExPASy TrEMBL
Match: A0A0A0KCH8 (Transpos_assoc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G237080 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 6.7e-42
Identity = 81/100 (81.00%), Postives = 89/100 (89.00%), Query Frame = 0

Query: 1   MFGGRMFNKE------ATDEYMKGAWEFVEKIKKDATDVDLIMCPCKDCRNMSHQSFDVV 60
           MFG RMFNKE      ATDEYMKGAWEF+EK+KKD T VDLIMCPCKDCR+MSHQSFD+V
Sbjct: 1   MFGERMFNKEWVHLNRATDEYMKGAWEFIEKVKKDVTYVDLIMCPCKDCRDMSHQSFDIV 60

Query: 61  YEHLVVKGIDPTYKIWYHHGEEVCVREEIEDVDMFDVFNM 95
           YEHLV+KG+DPTYKI YHHGEEVCV+EE+ED DMFDVFNM
Sbjct: 61  YEHLVIKGMDPTYKILYHHGEEVCVKEEVEDADMFDVFNM 100

BLAST of IVF0001360 vs. ExPASy TrEMBL
Match: A0A5A7UNZ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00030 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.7e-27
Identity = 60/71 (84.51%), Postives = 63/71 (88.73%), Query Frame = 0

Query: 6  MFNKE------ATDEYMKGAWEFVEKIKKDATDVDLIMCPCKDCRNMSHQSFDVVYEHLV 65
          MFNKE      ATDEYMKG WEFVEK+KKDATDVDLIMCP KDCRNMSHQSFDVVYEHLV
Sbjct: 1  MFNKEWVHLNRATDEYMKGVWEFVEKVKKDATDVDLIMCPSKDCRNMSHQSFDVVYEHLV 60

Query: 66 VKGIDPTYKIW 71
          +KG+DPTYKIW
Sbjct: 61 IKGMDPTYKIW 71

BLAST of IVF0001360 vs. ExPASy TrEMBL
Match: A0A5A7UPM1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00340 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 7.6e-22
Identity = 47/80 (58.75%), Postives = 63/80 (78.75%), Query Frame = 0

Query: 6  MFNKE------ATDEYMKGAWEFVEKIKKDATDVDLIMCPCKDCRNMSHQSFDVVYEHLV 65
          MF K+      AT+EY++GAW+F+++++     +D I CPCK CRNM+HQ+FDVVYEHLV
Sbjct: 1  MFQKDWVHLNRATNEYLRGAWDFMKQVENMLGGIDKIPCPCKTCRNMNHQTFDVVYEHLV 60

Query: 66 VKGIDPTYKIWYHHGEEVCV 80
          +KG+DPTY+ WYHHGEEV V
Sbjct: 61 IKGMDPTYRFWYHHGEEVPV 80

BLAST of IVF0001360 vs. ExPASy TrEMBL
Match: A0A803PSE2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.7e-21
Identity = 45/87 (51.72%), Postives = 67/87 (77.01%), Query Frame = 0

Query: 9   KEATDEYMKGAWEFVEKIKKDATDVDLIMCPCKDCRNMSHQSFDVVYEHLVVKGIDPTYK 68
           + A++EY +GA  FVE I+K+A   + ++CPCK CRN+SHQ  +++YEHLV+ GIDPTY 
Sbjct: 58  RRASNEYKEGARSFVETIEKEANYPEKLLCPCKFCRNLSHQKVNLLYEHLVINGIDPTYT 117

Query: 69  IWYHHGEEVCVREEIEDVDMFDVFNMY 96
           IW+HHGEE    ++IE+++ FD FN++
Sbjct: 118 IWFHHGEEAPRSDDIEEMNSFDAFNLF 144

BLAST of IVF0001360 vs. ExPASy TrEMBL
Match: A0A7J6F3N6 (Transpos_assoc domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_017792 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.2e-21
Identity = 45/85 (52.94%), Postives = 66/85 (77.65%), Query Frame = 0

Query: 11  ATDEYMKGAWEFVEKIKKDATDVDLIMCPCKDCRNMSHQSFDVVYEHLVVKGIDPTYKIW 70
           A++EY +GA  FVE I+K+A   + ++CPCK CRN+SHQ  +++YEHLV+ GIDPTY IW
Sbjct: 65  ASNEYKEGARSFVETIEKEANYPEKLLCPCKFCRNLSHQKVNLLYEHLVINGIDPTYTIW 124

Query: 71  YHHGEEVCVREEIEDVDMFDVFNMY 96
           +HHGEE    ++IE+++ FD FN++
Sbjct: 125 FHHGEEAPRSDDIEEMNSFDAFNLF 149

BLAST of IVF0001360 vs. NCBI nr
Match: KGN47253.1 (hypothetical protein Csa_017000 [Cucumis sativus])

HSP 1 Score: 180 bits (456), Expect = 1.00e-56
Identity = 81/100 (81.00%), Postives = 89/100 (89.00%), Query Frame = 0

Query: 1   MFGGRMFNKE------ATDEYMKGAWEFVEKIKKDATDVDLIMCPCKDCRNMSHQSFDVV 60
           MFG RMFNKE      ATDEYMKGAWEF+EK+KKD T VDLIMCPCKDCR+MSHQSFD+V
Sbjct: 1   MFGERMFNKEWVHLNRATDEYMKGAWEFIEKVKKDVTYVDLIMCPCKDCRDMSHQSFDIV 60

Query: 61  YEHLVVKGIDPTYKIWYHHGEEVCVREEIEDVDMFDVFNM 94
           YEHLV+KG+DPTYKI YHHGEEVCV+EE+ED DMFDVFNM
Sbjct: 61  YEHLVIKGMDPTYKILYHHGEEVCVKEEVEDADMFDVFNM 100

BLAST of IVF0001360 vs. NCBI nr
Match: KAA0055179.1 (uncharacterized protein E6C27_scaffold80G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 130 bits (328), Expect = 2.80e-34
Identity = 60/71 (84.51%), Postives = 63/71 (88.73%), Query Frame = 0

Query: 6  MFNKE------ATDEYMKGAWEFVEKIKKDATDVDLIMCPCKDCRNMSHQSFDVVYEHLV 65
          MFNKE      ATDEYMKG WEFVEK+KKDATDVDLIMCP KDCRNMSHQSFDVVYEHLV
Sbjct: 1  MFNKEWVHLNRATDEYMKGVWEFVEKVKKDATDVDLIMCPSKDCRNMSHQSFDVVYEHLV 60

Query: 66 VKGIDPTYKIW 70
          +KG+DPTYKIW
Sbjct: 61 IKGMDPTYKIW 71

BLAST of IVF0001360 vs. NCBI nr
Match: KAA0056266.1 (uncharacterized protein E6C27_scaffold226G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 113 bits (282), Expect = 1.22e-26
Identity = 47/81 (58.02%), Postives = 63/81 (77.78%), Query Frame = 0

Query: 6  MFNKE------ATDEYMKGAWEFVEKIKKDATDVDLIMCPCKDCRNMSHQSFDVVYEHLV 65
          MF K+      AT+EY++GAW+F+++++     +D I CPCK CRNM+HQ+FDVVYEHLV
Sbjct: 1  MFQKDWVHLNRATNEYLRGAWDFMKQVENMLGGIDKIPCPCKTCRNMNHQTFDVVYEHLV 60

Query: 66 VKGIDPTYKIWYHHGEEVCVR 80
          +KG+DPTY+ WYHHGEEV V 
Sbjct: 61 IKGMDPTYRFWYHHGEEVPVE 81

BLAST of IVF0001360 vs. NCBI nr
Match: KAF4359817.1 (hypothetical protein G4B88_020338 [Cannabis sativa])

HSP 1 Score: 111 bits (278), Expect = 1.40e-26
Identity = 45/85 (52.94%), Postives = 66/85 (77.65%), Query Frame = 0

Query: 11  ATDEYMKGAWEFVEKIKKDATDVDLIMCPCKDCRNMSHQSFDVVYEHLVVKGIDPTYKIW 70
           A++EY +GA  FVE I+K+A   + ++CPCK CRN+SHQ  +++YEHLV+ GIDPTY IW
Sbjct: 65  ASNEYKEGARSFVETIEKEANYPEKLLCPCKFCRNLSHQKVNLLYEHLVINGIDPTYTIW 124

Query: 71  YHHGEEVCVREEIEDVDMFDVFNMY 95
           +HHGEE    ++IE+++ FD FN++
Sbjct: 125 FHHGEEAPRSDDIEEMNSFDAFNLF 149

BLAST of IVF0001360 vs. NCBI nr
Match: KAF4351978.1 (hypothetical protein G4B88_001100 [Cannabis sativa])

HSP 1 Score: 111 bits (278), Expect = 1.57e-26
Identity = 45/85 (52.94%), Postives = 66/85 (77.65%), Query Frame = 0

Query: 11  ATDEYMKGAWEFVEKIKKDATDVDLIMCPCKDCRNMSHQSFDVVYEHLVVKGIDPTYKIW 70
           A++EY +GA  FVE I+K+A   + ++CPCK CRN+SHQ  +++YEHLV+ GIDPTY IW
Sbjct: 65  ASNEYKEGARSFVETIEKEANYPEKLLCPCKFCRNLSHQKVNLLYEHLVINGIDPTYTIW 124

Query: 71  YHHGEEVCVREEIEDVDMFDVFNMY 95
           +HHGEE    ++IE+++ FD FN++
Sbjct: 125 FHHGEEAPRSDDIEEMNSFDAFNLF 149

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KCH86.7e-4281.00Transpos_assoc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G237... [more]
A0A5A7UNZ22.7e-2784.51Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UPM17.6e-2258.75Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A803PSE21.7e-2151.72Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A7J6F3N62.2e-2152.94Transpos_assoc domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_017... [more]
Match NameE-valueIdentityDescription
KGN47253.11.00e-5681.00hypothetical protein Csa_017000 [Cucumis sativus][more]
KAA0055179.12.80e-3484.51uncharacterized protein E6C27_scaffold80G00030 [Cucumis melo var. makuwa][more]
KAA0056266.11.22e-2658.02uncharacterized protein E6C27_scaffold226G00340 [Cucumis melo var. makuwa][more]
KAF4359817.11.40e-2652.94hypothetical protein G4B88_020338 [Cannabis sativa][more]
KAF4351978.11.57e-2652.94hypothetical protein G4B88_001100 [Cannabis sativa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029480Transposase-associated domainPFAMPF13963Transpos_assoccoord: 8..75
e-value: 6.5E-19
score: 67.9
NoneNo IPR availablePANTHERPTHR10775:SF149TRANSPOSASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 10..80
NoneNo IPR availablePANTHERPTHR10775UNCHARACTERIZEDcoord: 10..80

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0001360.1IVF0001360.1mRNA