Homology
BLAST of IVF0001351 vs. ExPASy Swiss-Prot
Match:
P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)
HSP 1 Score: 472.2 bits (1214), Expect = 2.0e-131
Identity = 287/902 (31.82%), Postives = 466/902 (51.66%), Query Frame = 0
Query: 483 VVRDYPDVFPE-ELPRLP-PHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQKLL 542
+ +++ D+ E +LP P + +EF +EL + Y + P +++ + ++ + L
Sbjct: 377 IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGL 436
Query: 543 DKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAT 602
G IR S + PV+FV KK+G++R+ +DY+ LNK N YPLP I+ L ++QG+T
Sbjct: 437 KSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGST 496
Query: 603 VFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREF 662
+F+K+DL+S YH +R++ GD K AFR G +E++VM +G++ APA F +N + E
Sbjct: 497 IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA 556
Query: 663 LDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVS 722
++ V+ ++DDILI+SK+E+EH +H++ VLQ L++ L +KCEF QV F+G+ +S
Sbjct: 557 KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHIS 616
Query: 723 KAGVSVDPAKIEAVTDWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF 782
+ G + I+ V W +P E+R FLG Y R+F+ S++ PL L +K +
Sbjct: 617 EKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRW 676
Query: 783 VWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVA 842
W+ + +N+KQ LV+ PVL D S ++ +DAS +G VL Q+ V
Sbjct: 677 KWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVG 736
Query: 843 YASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKK-- 902
Y S ++ + NY D E+ A++ +LK WRHYL E +I TDH++L T +
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEP 796
Query: 903 LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIA 962
N R RW ++D++ EI Y PG AN +ADALSR ++ P+ +D E I
Sbjct: 797 ENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSIN 856
Query: 963 VSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVGFSISSDGGLVFER 1022
+ Q+++ + +++ +ND L+ L + V +I GL+
Sbjct: 857 F--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINS 916
Query: 1023 R--LCVPSDSAVKTELLSEAH----------------------------------SSHFP 1082
+ + +P+D+ + ++ + H +
Sbjct: 917 KDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHT 976
Query: 1083 CTQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV 1142
C K+ KP G LQP+ E WE++SMDFIT LP + G+ ++VVVDR +K A V
Sbjct: 977 CQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILV 1036
Query: 1143 PGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH 1202
P + TA + A+++ ++ G P I++D D FTS+ WK + FS +
Sbjct: 1037 PCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYR 1096
Query: 1203 PQTDVQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYKNSYQATIGMAPFEALYGKC 1262
PQTD QTER NQ +E +LR P +W H+ L++ +Y N+ + M PFE ++
Sbjct: 1097 PQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYS 1156
Query: 1263 CRSRFAGVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV 1322
+ E Q T + Q ++ ++T + K Y D++ +++ EF+ GD V
Sbjct: 1157 PALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLV 1216
Query: 1323 FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLR 1336
+K G L + KL+P F GPF +L++ GP Y L LP S+ + FHVS L
Sbjct: 1217 MVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE 1257
BLAST of IVF0001351 vs. ExPASy Swiss-Prot
Match:
P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)
HSP 1 Score: 472.2 bits (1214), Expect = 2.0e-131
Identity = 287/902 (31.82%), Postives = 466/902 (51.66%), Query Frame = 0
Query: 483 VVRDYPDVFPE-ELPRLP-PHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQKLL 542
+ +++ D+ E +LP P + +EF +EL + Y + P +++ + ++ + L
Sbjct: 377 IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGL 436
Query: 543 DKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAT 602
G IR S + PV+FV KK+G++R+ +DY+ LNK N YPLP I+ L ++QG+T
Sbjct: 437 KSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGST 496
Query: 603 VFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREF 662
+F+K+DL+S YH +R++ GD K AFR G +E++VM +G++ APA F +N + E
Sbjct: 497 IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA 556
Query: 663 LDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVS 722
++ V+ ++DDILI+SK+E+EH +H++ VLQ L++ L +KCEF QV F+G+ +S
Sbjct: 557 KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHIS 616
Query: 723 KAGVSVDPAKIEAVTDWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF 782
+ G + I+ V W +P E+R FLG Y R+F+ S++ PL L +K +
Sbjct: 617 EKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRW 676
Query: 783 VWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVA 842
W+ + +N+KQ LV+ PVL D S ++ +DAS +G VL Q+ V
Sbjct: 677 KWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVG 736
Query: 843 YASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKK-- 902
Y S ++ + NY D E+ A++ +LK WRHYL E +I TDH++L T +
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEP 796
Query: 903 LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIA 962
N R RW ++D++ EI Y PG AN +ADALSR ++ P+ +D E I
Sbjct: 797 ENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSIN 856
Query: 963 VSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVGFSISSDGGLVFER 1022
+ Q+++ + +++ +ND L+ L + V +I GL+
Sbjct: 857 F--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINS 916
Query: 1023 R--LCVPSDSAVKTELLSEAH----------------------------------SSHFP 1082
+ + +P+D+ + ++ + H +
Sbjct: 917 KDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHT 976
Query: 1083 CTQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV 1142
C K+ KP G LQP+ E WE++SMDFIT LP + G+ ++VVVDR +K A V
Sbjct: 977 CQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILV 1036
Query: 1143 PGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH 1202
P + TA + A+++ ++ G P I++D D FTS+ WK + FS +
Sbjct: 1037 PCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYR 1096
Query: 1203 PQTDVQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYKNSYQATIGMAPFEALYGKC 1262
PQTD QTER NQ +E +LR P +W H+ L++ +Y N+ + M PFE ++
Sbjct: 1097 PQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYS 1156
Query: 1263 CRSRFAGVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV 1322
+ E Q T + Q ++ ++T + K Y D++ +++ EF+ GD V
Sbjct: 1157 PALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLV 1216
Query: 1323 FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLR 1336
+K G L + KL+P F GPF +L++ GP Y L LP S+ + FHVS L
Sbjct: 1217 MVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE 1257
BLAST of IVF0001351 vs. ExPASy Swiss-Prot
Match:
P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)
HSP 1 Score: 472.2 bits (1214), Expect = 2.0e-131
Identity = 287/902 (31.82%), Postives = 466/902 (51.66%), Query Frame = 0
Query: 483 VVRDYPDVFPE-ELPRLP-PHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQKLL 542
+ +++ D+ E +LP P + +EF +EL + Y + P +++ + ++ + L
Sbjct: 377 IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGL 436
Query: 543 DKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAT 602
G IR S + PV+FV KK+G++R+ +DY+ LNK N YPLP I+ L ++QG+T
Sbjct: 437 KSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGST 496
Query: 603 VFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREF 662
+F+K+DL+S YH +R++ GD K AFR G +E++VM +G++ APA F +N + E
Sbjct: 497 IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA 556
Query: 663 LDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVS 722
++ V+ ++DDILI+SK+E+EH +H++ VLQ L++ L +KCEF QV F+G+ +S
Sbjct: 557 KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHIS 616
Query: 723 KAGVSVDPAKIEAVTDWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF 782
+ G + I+ V W +P E+R FLG Y R+F+ S++ PL L +K +
Sbjct: 617 EKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRW 676
Query: 783 VWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVA 842
W+ + +N+KQ LV+ PVL D S ++ +DAS +G VL Q+ V
Sbjct: 677 KWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVG 736
Query: 843 YASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKK-- 902
Y S ++ + NY D E+ A++ +LK WRHYL E +I TDH++L T +
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEP 796
Query: 903 LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIA 962
N R RW ++D++ EI Y PG AN +ADALSR ++ P+ +D E I
Sbjct: 797 ENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSIN 856
Query: 963 VSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVGFSISSDGGLVFER 1022
+ Q+++ + +++ +ND L+ L + V +I GL+
Sbjct: 857 F--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINS 916
Query: 1023 R--LCVPSDSAVKTELLSEAH----------------------------------SSHFP 1082
+ + +P+D+ + ++ + H +
Sbjct: 917 KDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHT 976
Query: 1083 CTQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV 1142
C K+ KP G LQP+ E WE++SMDFIT LP + G+ ++VVVDR +K A V
Sbjct: 977 CQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILV 1036
Query: 1143 PGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH 1202
P + TA + A+++ ++ G P I++D D FTS+ WK + FS +
Sbjct: 1037 PCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYR 1096
Query: 1203 PQTDVQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYKNSYQATIGMAPFEALYGKC 1262
PQTD QTER NQ +E +LR P +W H+ L++ +Y N+ + M PFE ++
Sbjct: 1097 PQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYS 1156
Query: 1263 CRSRFAGVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV 1322
+ E Q T + Q ++ ++T + K Y D++ +++ EF+ GD V
Sbjct: 1157 PALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLV 1216
Query: 1323 FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLR 1336
+K G L + KL+P F GPF +L++ GP Y L LP S+ + FHVS L
Sbjct: 1217 MVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE 1257
BLAST of IVF0001351 vs. ExPASy Swiss-Prot
Match:
P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)
HSP 1 Score: 472.2 bits (1214), Expect = 2.0e-131
Identity = 287/902 (31.82%), Postives = 466/902 (51.66%), Query Frame = 0
Query: 483 VVRDYPDVFPE-ELPRLP-PHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQKLL 542
+ +++ D+ E +LP P + +EF +EL + Y + P +++ + ++ + L
Sbjct: 377 IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGL 436
Query: 543 DKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAT 602
G IR S + PV+FV KK+G++R+ +DY+ LNK N YPLP I+ L ++QG+T
Sbjct: 437 KSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGST 496
Query: 603 VFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREF 662
+F+K+DL+S YH +R++ GD K AFR G +E++VM +G++ APA F +N + E
Sbjct: 497 IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA 556
Query: 663 LDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVS 722
++ V+ ++DDILI+SK+E+EH +H++ VLQ L++ L +KCEF QV F+G+ +S
Sbjct: 557 KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHIS 616
Query: 723 KAGVSVDPAKIEAVTDWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF 782
+ G + I+ V W +P E+R FLG Y R+F+ S++ PL L +K +
Sbjct: 617 EKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRW 676
Query: 783 VWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVA 842
W+ + +N+KQ LV+ PVL D S ++ +DAS +G VL Q+ V
Sbjct: 677 KWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVG 736
Query: 843 YASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKK-- 902
Y S ++ + NY D E+ A++ +LK WRHYL E +I TDH++L T +
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEP 796
Query: 903 LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIA 962
N R RW ++D++ EI Y PG AN +ADALSR ++ P+ +D E I
Sbjct: 797 ENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSIN 856
Query: 963 VSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVGFSISSDGGLVFER 1022
+ Q+++ + +++ +ND L+ L + V +I GL+
Sbjct: 857 F--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINS 916
Query: 1023 R--LCVPSDSAVKTELLSEAH----------------------------------SSHFP 1082
+ + +P+D+ + ++ + H +
Sbjct: 917 KDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHT 976
Query: 1083 CTQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV 1142
C K+ KP G LQP+ E WE++SMDFIT LP + G+ ++VVVDR +K A V
Sbjct: 977 CQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILV 1036
Query: 1143 PGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH 1202
P + TA + A+++ ++ G P I++D D FTS+ WK + FS +
Sbjct: 1037 PCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYR 1096
Query: 1203 PQTDVQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYKNSYQATIGMAPFEALYGKC 1262
PQTD QTER NQ +E +LR P +W H+ L++ +Y N+ + M PFE ++
Sbjct: 1097 PQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYS 1156
Query: 1263 CRSRFAGVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV 1322
+ E Q T + Q ++ ++T + K Y D++ +++ EF+ GD V
Sbjct: 1157 PALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLV 1216
Query: 1323 FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLR 1336
+K G L + KL+P F GPF +L++ GP Y L LP S+ + FHVS L
Sbjct: 1217 MVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE 1257
BLAST of IVF0001351 vs. ExPASy Swiss-Prot
Match:
P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)
HSP 1 Score: 472.2 bits (1214), Expect = 2.0e-131
Identity = 287/902 (31.82%), Postives = 466/902 (51.66%), Query Frame = 0
Query: 483 VVRDYPDVFPE-ELPRLP-PHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQKLL 542
+ +++ D+ E +LP P + +EF +EL + Y + P +++ + ++ + L
Sbjct: 377 IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGL 436
Query: 543 DKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAT 602
G IR S + PV+FV KK+G++R+ +DY+ LNK N YPLP I+ L ++QG+T
Sbjct: 437 KSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGST 496
Query: 603 VFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREF 662
+F+K+DL+S YH +R++ GD K AFR G +E++VM +G++ APA F +N + E
Sbjct: 497 IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA 556
Query: 663 LDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVS 722
++ V+ ++DDILI+SK+E+EH +H++ VLQ L++ L +KCEF QV F+G+ +S
Sbjct: 557 KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHIS 616
Query: 723 KAGVSVDPAKIEAVTDWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF 782
+ G + I+ V W +P E+R FLG Y R+F+ S++ PL L +K +
Sbjct: 617 EKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRW 676
Query: 783 VWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVA 842
W+ + +N+KQ LV+ PVL D S ++ +DAS +G VL Q+ V
Sbjct: 677 KWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVG 736
Query: 843 YASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKK-- 902
Y S ++ + NY D E+ A++ +LK WRHYL E +I TDH++L T +
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEP 796
Query: 903 LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIA 962
N R RW ++D++ EI Y PG AN +ADALSR ++ P+ +D E I
Sbjct: 797 ENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSIN 856
Query: 963 VSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVGFSISSDGGLVFER 1022
+ Q+++ + +++ +ND L+ L + V +I GL+
Sbjct: 857 F--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINS 916
Query: 1023 R--LCVPSDSAVKTELLSEAH----------------------------------SSHFP 1082
+ + +P+D+ + ++ + H +
Sbjct: 917 KDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHT 976
Query: 1083 CTQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV 1142
C K+ KP G LQP+ E WE++SMDFIT LP + G+ ++VVVDR +K A V
Sbjct: 977 CQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILV 1036
Query: 1143 PGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH 1202
P + TA + A+++ ++ G P I++D D FTS+ WK + FS +
Sbjct: 1037 PCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYR 1096
Query: 1203 PQTDVQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYKNSYQATIGMAPFEALYGKC 1262
PQTD QTER NQ +E +LR P +W H+ L++ +Y N+ + M PFE ++
Sbjct: 1097 PQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYS 1156
Query: 1263 CRSRFAGVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV 1322
+ E Q T + Q ++ ++T + K Y D++ +++ EF+ GD V
Sbjct: 1157 PALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLV 1216
Query: 1323 FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLR 1336
+K G L + KL+P F GPF +L++ GP Y L LP S+ + FHVS L
Sbjct: 1217 MVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE 1257
BLAST of IVF0001351 vs. ExPASy TrEMBL
Match:
A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)
HSP 1 Score: 2609.7 bits (6763), Expect = 0.0e+00
Identity = 1337/1455 (91.89%), Postives = 1357/1455 (93.26%), Query Frame = 0
Query: 1 MEQRFRDLIMQMREQQQPAPPAPAPAPAPAPAPAP----APVPVAPQVVPDQLSAEAKHL 60
MEQRFRDLIMQMREQQ+PA P PAPAPAPAPAPAP APVPVAPQ VPDQLSAEAKHL
Sbjct: 47 MEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPALAPVPVAPQFVPDQLSAEAKHL 106
Query: 61 RDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVFMLTDRDTAWWET 120
RDFRKYNPTTFDGSLEDPTRAQ+WLSSLETIFRYMKCPEDQKVQCAVFMLTDR TAWWET
Sbjct: 107 RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET 166
Query: 121 TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR 180
TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR
Sbjct: 167 TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR 226
Query: 181 FAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGR 240
FAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSK AGR
Sbjct: 227 FAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGR 286
Query: 241 GSTSGQKRKAEQQPVLVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCL 300
G TSGQKRKAEQQPV VPQRNFRSGGEFRRFQQKPFEAGEAAR KPLCT CGKHHLGRCL
Sbjct: 287 GLTSGQKRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARWKPLCTICGKHHLGRCL 346
Query: 301 FGTRTCFKCRQEGQTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTG--P 360
FGTRTCFKCRQEG TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAE+AGTVVTG P
Sbjct: 347 FGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLP 406
Query: 361 LRGRALTPCSISIYSFRGVMGSVCVEVKACQIEIAGH----GLVVLDMLDFDVILGMDWL 420
+ G S+ + G +VK CQIEIAGH L+VLDMLDFDVILGMDWL
Sbjct: 407 VLGHYALVLFDSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDWL 466
Query: 421 AANHASIDCSRKEVTFNPPSMASFKFKGEGSRSLPQVISAIRASKLLSQGTWGILASVVD 480
AA+HASIDCSRKEVTFNPPS ASFKFKG GSRSLPQVISAIRASKLLSQGTWGILASVVD
Sbjct: 467 AAHHASIDCSRKEVTFNPPSRASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD 526
Query: 481 TREVDVSLSSEPVVRDYPDVFPEELPRLPPHREVEFAIELEPGTVPISRAPYRMAPAELK 540
TRE DVSLSSEPVVRDYPDVFPEELP LPPHREVEFAIELEPGTVPISRAPYRMAPAELK
Sbjct: 527 TREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELK 586
Query: 541 ELKVQLQKLLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID 600
ELKVQLQ+LLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID
Sbjct: 587 ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID 646
Query: 601 DLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFM 660
DLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFM
Sbjct: 647 DLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFM 706
Query: 661 DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLK 720
DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLK
Sbjct: 707 DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLK 766
Query: 721 QVSFLGHVVSKAGVSVDPAKIEAVTDWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPL 780
QVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPL
Sbjct: 767 QVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPL 826
Query: 781 TQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQ 840
TQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQ
Sbjct: 827 TQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQ 886
Query: 841 GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQK 900
GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQK
Sbjct: 887 GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQK 946
Query: 901 KLNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI 960
+LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
Sbjct: 947 ELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI 1006
Query: 961 AVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVGFSISSDGGLVFE 1020
AVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV FS+SSDGGL+FE
Sbjct: 1007 AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFE 1066
Query: 1021 RRLCVPSDSAVKTELLSEAHSSHFP----------------------------------C 1080
RRLCVPSDS VKTELLSEAHSS F C
Sbjct: 1067 RRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEFVSRCLVC 1126
Query: 1081 TQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP 1140
QVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP
Sbjct: 1127 QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP 1186
Query: 1141 GKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP 1200
GKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHP
Sbjct: 1187 GKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTAMGTRLDFSTAFHP 1246
Query: 1201 QTDVQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYKNSYQATIGMAPFEALYGKCC 1260
QTD QTERLNQVLE MLRACALEFPGSWDSHLHLMEF Y NSYQATIGMAPFEALYGKCC
Sbjct: 1247 QTDGQTERLNQVLEYMLRACALEFPGSWDSHLHLMEFVYNNSYQATIGMAPFEALYGKCC 1306
Query: 1261 RSR--FAGVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKV 1320
RS + VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKV
Sbjct: 1307 RSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKV 1366
Query: 1321 FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 1380
FLKVAPMRGVLRFERRGKLSPRF+GPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Sbjct: 1367 FLKVAPMRGVLRFERRGKLSPRFIGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 1426
Query: 1381 YVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWE 1410
YVPDPSHVVDY+PL+IDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWE
Sbjct: 1427 YVPDPSHVVDYKPLKIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWE 1486
BLAST of IVF0001351 vs. ExPASy TrEMBL
Match:
A0A5A7UAA8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00800 PE=4 SV=1)
HSP 1 Score: 2566.2 bits (6650), Expect = 0.0e+00
Identity = 1319/1470 (89.73%), Postives = 1344/1470 (91.43%), Query Frame = 0
Query: 10 MQMREQQQPAP-PAPAPAPAPAPAPAPAPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFD 69
+Q + P P PAPAPAPAP PAPAPA VPVAPQ VPDQLSAEAKHLRDFRKYNPTTFD
Sbjct: 22 VQPEKPASPTPAPAPAPAPAPVPAPAPALVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFD 81
Query: 70 GSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVFMLTDRDTAWWETTERMLGGDVSQI 129
GSLEDPTRAQ+WLSSLETIFRYMKCPEDQKVQCAVFMLTDR TAWWETTERMLGGDVSQI
Sbjct: 82 GSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQI 141
Query: 130 TWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAAR 189
TWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAAR
Sbjct: 142 TWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAAR 201
Query: 190 ADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGRGSTSGQKRKAEQ 249
ADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQE ANSSK AGRGSTSGQKRKAEQ
Sbjct: 202 ADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQEMANSSKTAGRGSTSGQKRKAEQ 261
Query: 250 QPVLVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQE 309
QPV VPQRNFRSGGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQE
Sbjct: 262 QPVPVPQRNFRSGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQE 321
Query: 310 GQTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTGPL------------- 369
G TADRCPLRLTG AQNQGAGAPHQGRVFATN+TEAE+AGTVVTG L
Sbjct: 322 GHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDS 381
Query: 370 -------RGRALTPCSISIYSFRGVM-----GSVCV----EVKACQIEIAGH----GLVV 429
++ + + V+ C+ +VKACQIEIAGH L+V
Sbjct: 382 GSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSREKVKACQIEIAGHVIEVTLIV 441
Query: 430 LDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGEGSRSLPQVISAIRASK 489
LDMLDFDVILGMDWLAANHASIDCSRK+VTFNPPSMASFKFKG GS+SLPQVISAIRASK
Sbjct: 442 LDMLDFDVILGMDWLAANHASIDCSRKDVTFNPPSMASFKFKGGGSKSLPQVISAIRASK 501
Query: 490 LLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPRLPPHREVEFAIELEPGTV 549
LLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELP LPPHREVEFAIELEPGTV
Sbjct: 502 LLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTV 561
Query: 550 PISRAPYRMAPAELKELKVQLQKLLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYREL 609
PISRAPYRMAPAELKELKVQLQ+LLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDYREL
Sbjct: 562 PISRAPYRMAPAELKELKVQLQELLDKGFIRPNVSPWGAPVLFVKKKDGSMRLCIDYREL 621
Query: 610 NKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEF 669
NKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGY+QLRIKD DVPKTAFRSRYGHYEF
Sbjct: 622 NKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYNQLRIKDEDVPKTAFRSRYGHYEF 681
Query: 670 IVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRD 729
IVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRD
Sbjct: 682 IVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRD 741
Query: 730 NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTDWTRPSTVSEVRSFLGLAGY 789
NKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVT WTRPSTVSEVRSFLGLAGY
Sbjct: 742 NKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGY 801
Query: 790 YRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIY 849
YRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIY
Sbjct: 802 YRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIY 861
Query: 850 SDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ 909
SDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ
Sbjct: 862 SDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ 921
Query: 910 IFTDHKSLKYFFTQKKLNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALI 969
IFTDHKSLKYFFTQK+LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALI
Sbjct: 922 IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALI 981
Query: 970 TRQAPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ 1029
TRQAPLHRDLERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ
Sbjct: 982 TRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ 1041
Query: 1030 AVGFSISSDGGLVFERRLCVPSDSAVKTELLSEAHSSHFP-------------------- 1089
AV FS+SSDGGL FE RLCVPSDSAVKTELL EAHSS F
Sbjct: 1042 AVEFSLSSDGGLSFEGRLCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRN 1101
Query: 1090 --------------CTQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVI 1149
C QVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVI
Sbjct: 1102 MKREVAEFVSKCLVCQQVKEPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVI 1161
Query: 1150 WVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQ 1209
WVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQ
Sbjct: 1162 WVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQ 1221
Query: 1210 TAMGTRLDFSTAFHPQTDVQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYKNSYQA 1269
TAMGTRLDFSTAFHPQ D QTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAY NSYQA
Sbjct: 1222 TAMGTRLDFSTAFHPQADGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQA 1281
Query: 1270 TIGMAPFEALYGKCCRSR--FAGVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYA 1329
TIGMAPFEALYGKCCRS + VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYA
Sbjct: 1282 TIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYA 1341
Query: 1330 DVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPS 1389
DVRRKDLEFE+ DKVFLKVAPM+GVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPS
Sbjct: 1342 DVRRKDLEFEIRDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPS 1401
Query: 1390 LSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLV 1410
LSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSY EQPVEVLAREVKTLRNKEIPLV
Sbjct: 1402 LSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLV 1461
BLAST of IVF0001351 vs. ExPASy TrEMBL
Match:
A0A5A7TB42 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold118G00260 PE=4 SV=1)
HSP 1 Score: 2519.2 bits (6528), Expect = 0.0e+00
Identity = 1299/1437 (90.40%), Postives = 1318/1437 (91.72%), Query Frame = 0
Query: 34 APAPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKC 93
A A P AP VVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKC
Sbjct: 183 AKATDPAAP-VVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKC 242
Query: 94 PEDQKVQCAVFMLTDRDTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQE 153
PEDQKVQCAVFMLTDR TAWWETTERMLGGDVSQI WQQFKESFY+KFFSASLRDA+RQE
Sbjct: 243 PEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQIMWQQFKESFYSKFFSASLRDAERQE 302
Query: 154 FLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHA 213
FLNLEQGDMTVEQYDAEFDMLS FAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHA
Sbjct: 303 FLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHA 362
Query: 214 DALRLAVDLSLQERANSSKAAGRGSTSGQKRKAEQQPVLVPQRNFRSGGEFRRFQQKPFE 273
DALRLAVDLSLQERANSSK AGRGSTSGQKRKAEQQPV VPQRNFRS GEFRRFQQKPFE
Sbjct: 363 DALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRSCGEFRRFQQKPFE 422
Query: 274 AGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGQTADRCPLRLTGNAQNQGAGAPHQ 333
GEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEG TADRCPLRLTGNAQNQGAGAPHQ
Sbjct: 423 VGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQ 482
Query: 334 GRVFATNKTEAERAGTVVTG--PLRGR-AL----TPCSISIYSFRGVM------------ 393
GRVFATNKTEAERAGTVVTG P+ G AL + S S S V+
Sbjct: 483 GRVFATNKTEAERAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHV 542
Query: 394 ------GSVCV----EVKACQIEIAGH----GLVVLDMLDFDVILGMDWLAANHASIDCS 453
C+ +VKACQIEIA H L+VLDMLDFDVILGMDWLAANHASIDCS
Sbjct: 543 LSVSTPSRECMLSKEKVKACQIEIADHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCS 602
Query: 454 RKEVTFNPPSMASFKFKGEGSRSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSS 513
RKEVTFNPPSMASFKFKG GSRSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSS
Sbjct: 603 RKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSS 662
Query: 514 EPVVRDYPDVFPEELPRLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQKLL 573
EPVVRDYPDVFPEELP LPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQ+LL
Sbjct: 663 EPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELL 722
Query: 574 DKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAT 633
DKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAT
Sbjct: 723 DKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAT 782
Query: 634 VFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREF 693
VFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVF+EF
Sbjct: 783 VFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKEF 842
Query: 694 LDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVS 753
LDTFVIVFIDDILIYSK EAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVS
Sbjct: 843 LDTFVIVFIDDILIYSKMEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVS 902
Query: 754 KAGVSVDPAKIEAVTDWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF 813
KAGVSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF
Sbjct: 903 KAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF 962
Query: 814 VWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQ 873
VWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLG VLMQQGKVVAYASRQ
Sbjct: 963 VWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGFVLMQQGKVVAYASRQ 1022
Query: 874 LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKKLNMRQRRWL 933
LKSHEQNYPTHDLELAAV+FALKIWRHYLYGEKIQIFTDHKSLKYFFTQK+LNMRQRRWL
Sbjct: 1023 LKSHEQNYPTHDLELAAVIFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWL 1082
Query: 934 ELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTIQ 993
ELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR APLHRDLERAEIAVSVGA+T+Q
Sbjct: 1083 ELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRHAPLHRDLERAEIAVSVGAITMQ 1142
Query: 994 LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVGFSISSDGGLVFERRLCVPSDSA 1053
LAQLTVQPTLRQRII AQSNDPYLVEKRGLAEAGQA GFSISSDGGLVFERRLCVPSDSA
Sbjct: 1143 LAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSA 1202
Query: 1054 VKTELLSEAHSSHF----------------------------------PCTQVKAPRQKP 1113
+K ELLSEAHSS F C QVKAPRQKP
Sbjct: 1203 IKIELLSEAHSSPFFMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKP 1262
Query: 1114 AGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKW 1173
AGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY ASKW
Sbjct: 1263 AGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYIASKW 1322
Query: 1174 AQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDVQTERLN 1233
AQLYMSEIVRLHGVPVSIVSDRDARFTS+FWKGLQTAMGTRLDFSTAFHPQTD QTERLN
Sbjct: 1323 AQLYMSEIVRLHGVPVSIVSDRDARFTSQFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN 1382
Query: 1234 QVLEDMLRACALEFPGSWDSHLHLMEFAYKNSYQATIGMAPFEALYGKCCRSR--FAGVG 1293
QVLEDMLRACALEFPGSWDSHLHLMEFAY NSYQATIGMAPFEALY KCCRS + VG
Sbjct: 1383 QVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYDKCCRSLVCWGEVG 1442
Query: 1294 EQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV 1353
EQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV
Sbjct: 1443 EQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV 1502
Query: 1354 LRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVD 1402
LRFERRGKLSPRFVG FEILERIGPVAYR+ALPPSLSTVHDVFHVSMLRKYVPDPSHVVD
Sbjct: 1503 LRFERRGKLSPRFVGSFEILERIGPVAYRVALPPSLSTVHDVFHVSMLRKYVPDPSHVVD 1562
BLAST of IVF0001351 vs. ExPASy TrEMBL
Match:
A0A5A7UDB1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00190 PE=4 SV=1)
HSP 1 Score: 2516.5 bits (6521), Expect = 0.0e+00
Identity = 1300/1454 (89.41%), Postives = 1320/1454 (90.78%), Query Frame = 0
Query: 1 MEQRFRDLIMQMREQQQPAPPAPAPAPA----PAPAPAPAPVPVAPQVVPDQLSAEAKHL 60
MEQRF+DLIMQMREQQ+PA PAPAPAPA PAPAPAPAPVPVAPQVVPDQLSAEAKHL
Sbjct: 47 MEQRFKDLIMQMREQQKPASPAPAPAPAPAPVPAPAPAPAPVPVAPQVVPDQLSAEAKHL 106
Query: 61 RDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVFMLTDRDTAWWET 120
RDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPED KVQCAVFMLTDR TAWWET
Sbjct: 107 RDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDPKVQCAVFMLTDRGTAWWET 166
Query: 121 TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR 180
TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR
Sbjct: 167 TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR 226
Query: 181 FAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGR 240
FAPEMIATEAARADKFVRGL LDIQGLVRAFRP THADALRLAVDLSLQERANSSK AGR
Sbjct: 227 FAPEMIATEAARADKFVRGLWLDIQGLVRAFRPPTHADALRLAVDLSLQERANSSKTAGR 286
Query: 241 GSTSGQKRKAEQQPVLVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCL 300
GSTSGQKRKAEQQPV VPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCL
Sbjct: 287 GSTSGQKRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCL 346
Query: 301 FGTRTCFKCRQEGQTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTVVT--GP 360
FGTRTCFKCRQEG TADRCPLRLTGNA NQGAGAPHQGRVFATNKTEAE+AGTVVT P
Sbjct: 347 FGTRTCFKCRQEGHTADRCPLRLTGNAPNQGAGAPHQGRVFATNKTEAEKAGTVVTEVEP 406
Query: 361 LRGRALTPCSISIYSFRGVMGSVCVEVKACQIEIAGH----GLVVLDMLDFDVILGMDWL 420
L +S+ + G VKACQIEIAGH L+VLDMLDFDVILGMDWL
Sbjct: 407 LHH------VLSVSTPSGECMLSKERVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWL 466
Query: 421 AANHASIDCSRKEVTFNPPSMASFKFKGEGSRSLPQVISAIRASKLLSQGTWGILASVVD 480
AANHASIDCSRKEVTFNPPSMASFKFKG GS+SLPQVISAI+ASKLLSQGTWGILASVVD
Sbjct: 467 AANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIKASKLLSQGTWGILASVVD 526
Query: 481 TREVDVSLSSEPVVRDYPDVFPEELPRLPPHREVEFAIELEPGTVPISRAPYRMAPAELK 540
TRE DVSLSSEPVVRDY DVFPEELP LPPHREVEFAIELE GTVPISRAPYRMAPAELK
Sbjct: 527 TREADVSLSSEPVVRDYSDVFPEELPGLPPHREVEFAIELESGTVPISRAPYRMAPAELK 586
Query: 541 ELKVQLQKLLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID 600
ELKVQLQ+LLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID RELNKVTVKNRYPLPRID
Sbjct: 587 ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDNRELNKVTVKNRYPLPRID 646
Query: 601 DLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFM 660
DLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFM
Sbjct: 647 DLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFM 706
Query: 661 DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLK 720
DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLK
Sbjct: 707 DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLK 766
Query: 721 QVSFLGHVVSKAGVSVDPAKIEAVTDWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPL 780
QVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPL
Sbjct: 767 QVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPL 826
Query: 781 TQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQ 840
TQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVP+GSGSFVIYSDA KKGLGCVLMQQ
Sbjct: 827 TQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPNGSGSFVIYSDAFKKGLGCVLMQQ 886
Query: 841 GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQK 900
GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQK
Sbjct: 887 GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQK 946
Query: 901 KLNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI 960
+LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Sbjct: 947 ELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK----------------------- 1006
Query: 961 AVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVGFSISSDGGLVFE 1020
LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAE QAV FS+SSDGGL+FE
Sbjct: 1007 ----------LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAETRQAVEFSLSSDGGLLFE 1066
Query: 1021 RRLCVPSDSAVKTELLSEAHSSHFP----------------------------------C 1080
RRLCVPSD AVKTELLSEAHSS F C
Sbjct: 1067 RRLCVPSDRAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVC 1126
Query: 1081 TQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP 1140
QVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTL+GFTVIWVVVDRLTKSAHF+P
Sbjct: 1127 QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFLP 1186
Query: 1141 GKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP 1200
GKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR TSKFWKGLQTAMGTRLDFSTAFHP
Sbjct: 1187 GKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARSTSKFWKGLQTAMGTRLDFSTAFHP 1246
Query: 1201 QTDVQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYKNSYQATIGMAPFEALYGKCC 1260
QTD QTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAY NSYQATIGMAPFEALYGKCC
Sbjct: 1247 QTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCC 1306
Query: 1261 RSR--FAGVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKV 1320
RS + VGEQRLMGPELVQSTNEAIQKI+SRM TAQSRQKSYADVRRKDLEFEVGDKV
Sbjct: 1307 RSPVCWDEVGEQRLMGPELVQSTNEAIQKIKSRMRTAQSRQKSYADVRRKDLEFEVGDKV 1366
Query: 1321 FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 1380
FLKVAPMRGVLRFERRGKLS FVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Sbjct: 1367 FLKVAPMRGVLRFERRGKLSSHFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 1426
Query: 1381 YVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWE 1409
YVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLR+KEIPLVKVLWRNHRVEEATWE
Sbjct: 1427 YVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRSKEIPLVKVLWRNHRVEEATWE 1461
BLAST of IVF0001351 vs. ExPASy TrEMBL
Match:
A0A5A7TGX4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold529G00100 PE=4 SV=1)
HSP 1 Score: 2510.3 bits (6505), Expect = 0.0e+00
Identity = 1292/1453 (88.92%), Postives = 1317/1453 (90.64%), Query Frame = 0
Query: 1 MEQRFRDLIMQMREQQQPA----PPAPAPAPAPAPAPAPAPVPVAPQVVPDQLSAEAKHL 60
MEQRFRDLIMQMREQQ+PA P+PAPAPAPAPAP PAPVPVAPQ VPDQLSAEAKHL
Sbjct: 135 MEQRFRDLIMQMREQQKPASPTPAPSPAPAPAPAPAPVPAPVPVAPQFVPDQLSAEAKHL 194
Query: 61 RDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVFMLTDRDTAWWET 120
RDFRKYNPTTFDGSLEDPTRAQ+WLSSLETIFRYMKCPEDQKVQCAVFMLTDR TAWWET
Sbjct: 195 RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET 254
Query: 121 TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR 180
TERMLGGDVSQITWQQFKESFYAKFFSASLRDAK+QEFLNLEQGDMTVEQYDAEFDMLSR
Sbjct: 255 TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKQQEFLNLEQGDMTVEQYDAEFDMLSR 314
Query: 181 FAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGR 240
FAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGR
Sbjct: 315 FAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGR 374
Query: 241 GSTSGQKRKAEQQPVLVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCL 300
GSTSGQKRKAEQ PV VPQRNFR GGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCL
Sbjct: 375 GSTSGQKRKAEQHPVPVPQRNFRPGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCL 434
Query: 301 FGTRTCFKCRQEGQTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTGPLR 360
F TRTCFKCRQEG TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTE E+AGTVVTG L
Sbjct: 435 FETRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEVEKAGTVVTGTL- 494
Query: 361 GRALTPCSISIY---SFRGVMGSVCVEVKACQIEIAGH----GLVVLDMLDFDVILGMDW 420
L ++ ++ S + S V +IEIAGH L+VLDMLDFDVILGMDW
Sbjct: 495 -PVLGHYALVLFDSGSSHSFISSAFVLHARLEIEIAGHVIEVTLIVLDMLDFDVILGMDW 554
Query: 421 LAANHASIDCSRKEVTFNPPSMASFKFKGEGSRSLPQVISAIRASKLLSQGTWGILASVV 480
LAANHASIDCSRKEVTFNPPS+ASFKFKG GS+SLPQVISAIRASKLL+QGTWGIL SVV
Sbjct: 555 LAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAIRASKLLNQGTWGILVSVV 614
Query: 481 DTREVDVSLSSEPVVRDYPDVFPEELPRLPPHREVEFAIELEPGTVPISRAPYRMAPAEL 540
DTREVDVSLSSEPVVRDYPDVFP+ELP LPPHREVEFAIELEPGTVPISRAPYRMAPAEL
Sbjct: 615 DTREVDVSLSSEPVVRDYPDVFPDELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAEL 674
Query: 541 KELKVQLQKLLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI 600
KELKVQLQ+LLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI
Sbjct: 675 KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI 734
Query: 601 DDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVF 660
DDLFDQLQGATVFS+IDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVF
Sbjct: 735 DDLFDQLQGATVFSEIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVF 794
Query: 661 MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWL 720
MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTL DNKLYAKFSKCEFWL
Sbjct: 795 MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFWL 854
Query: 721 KQVSFLGHVVSKAGVSVDPAKIEAVTDWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATP 780
KQVSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEVRSFLGLAGYYR+FVENFSRIATP
Sbjct: 855 KQVSFLGHVVSKAGVSVDPAKIEAVTGWARPSTVSEVRSFLGLAGYYRQFVENFSRIATP 914
Query: 781 LTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ 840
LTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV DGSGSFVIYSDASKKGLGCVLMQ
Sbjct: 915 LTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVRDGSGSFVIYSDASKKGLGCVLMQ 974
Query: 841 QGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQ 900
QGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQ
Sbjct: 975 QGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQ 1034
Query: 901 KKLNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE 960
K+LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE
Sbjct: 1035 KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE 1094
Query: 961 IAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVGFSISSDGGLVF 1020
IAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA FS+SSDGGL+F
Sbjct: 1095 IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLF 1154
Query: 1021 ERRLCVPSDSAVKTELLSEAHSSHFP---------------------------------- 1080
ER LCVPSDSAVKTELLSEAHSS F
Sbjct: 1155 ERHLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWHNMKREVAEFVSRCLV 1214
Query: 1081 CTQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV 1140
C QVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTK AHFV
Sbjct: 1215 CQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKLAHFV 1274
Query: 1141 PGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH 1200
PGKSTYTASKWAQLYMSEIVRLHGVPVSIVS+RDARFTSKFWKGLQTAMGTRLDFSTAFH
Sbjct: 1275 PGKSTYTASKWAQLYMSEIVRLHGVPVSIVSNRDARFTSKFWKGLQTAMGTRLDFSTAFH 1334
Query: 1201 PQTDVQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYKNSYQATIGMAPFEALYGKC 1260
PQTD QTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAY NSYQATIGMAPFEALYGKC
Sbjct: 1335 PQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC 1394
Query: 1261 CRSRFAGVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVF 1320
CRS GE DVRRKDLEFEVGDKVF
Sbjct: 1395 CRSPVCW-GE---------------------------------VDVRRKDLEFEVGDKVF 1454
Query: 1321 LKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKY 1380
LKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL LPPSLSTVHDV HVSMLRKY
Sbjct: 1455 LKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLVLPPSLSTVHDVIHVSMLRKY 1514
Query: 1381 VPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWER 1409
VPDPSHVVDYEPLEIDENLSY EQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWER
Sbjct: 1515 VPDPSHVVDYEPLEIDENLSYAEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWER 1551
BLAST of IVF0001351 vs. NCBI nr
Match:
KAA0048687.1 (pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 2599 bits (6736), Expect = 0.0
Identity = 1336/1452 (92.01%), Postives = 1356/1452 (93.39%), Query Frame = 0
Query: 1 MEQRFRDLIMQMREQQQPAPPAPAPAPAPAPAPAPAP----VPVAPQVVPDQLSAEAKHL 60
MEQRFRDLIMQMREQQ+PA P PAPAPAPAPAPAPAP VPVAPQ VPDQLSAEAKHL
Sbjct: 47 MEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPALAPVPVAPQFVPDQLSAEAKHL 106
Query: 61 RDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVFMLTDRDTAWWET 120
RDFRKYNPTTFDGSLEDPTRAQ+WLSSLETIFRYMKCPEDQKVQCAVFMLTDR TAWWET
Sbjct: 107 RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET 166
Query: 121 TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR 180
TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR
Sbjct: 167 TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR 226
Query: 181 FAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGR 240
FAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSK AGR
Sbjct: 227 FAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGR 286
Query: 241 GSTSGQKRKAEQQPVLVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCL 300
G TSGQKRKAEQQPV VPQRNFRSGGEFRRFQQKPFEAGEAAR KPLCT CGKHHLGRCL
Sbjct: 287 GLTSGQKRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARWKPLCTICGKHHLGRCL 346
Query: 301 FGTRTCFKCRQEGQTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTG--P 360
FGTRTCFKCRQEG TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAE+AGTVVTG P
Sbjct: 347 FGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLP 406
Query: 361 LRGRALTPCSISIYSFRGVMGSVCVEVKACQIEIAGH----GLVVLDMLDFDVILGMDWL 420
+ G S+ + G +VK CQIEIAGH L+VLDMLDFDVILGMDWL
Sbjct: 407 VLGHYALVLFDSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDWL 466
Query: 421 AANHASIDCSRKEVTFNPPSMASFKFKGEGSRSLPQVISAIRASKLLSQGTWGILASVVD 480
AA+HASIDCSRKEVTFNPPS ASFKFKG GSRSLPQVISAIRASKLLSQGTWGILASVVD
Sbjct: 467 AAHHASIDCSRKEVTFNPPSRASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVD 526
Query: 481 TREVDVSLSSEPVVRDYPDVFPEELPRLPPHREVEFAIELEPGTVPISRAPYRMAPAELK 540
TRE DVSLSSEPVVRDYPDVFPEELP LPPHREVEFAIELEPGTVPISRAPYRMAPAELK
Sbjct: 527 TREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELK 586
Query: 541 ELKVQLQKLLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID 600
ELKVQLQ+LLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID
Sbjct: 587 ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID 646
Query: 601 DLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFM 660
DLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFM
Sbjct: 647 DLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFM 706
Query: 661 DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLK 720
DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLK
Sbjct: 707 DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLK 766
Query: 721 QVSFLGHVVSKAGVSVDPAKIEAVTDWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPL 780
QVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPL
Sbjct: 767 QVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPL 826
Query: 781 TQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQ 840
TQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQ
Sbjct: 827 TQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQ 886
Query: 841 GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQK 900
GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQK
Sbjct: 887 GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQK 946
Query: 901 KLNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI 960
+LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI
Sbjct: 947 ELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI 1006
Query: 961 AVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVGFSISSDGGLVFE 1020
AVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV FS+SSDGGL+FE
Sbjct: 1007 AVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFE 1066
Query: 1021 RRLCVPSDSAVKTELLSEAHSSHFP----------------------------------C 1080
RRLCVPSDS VKTELLSEAHSS F C
Sbjct: 1067 RRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEFVSRCLVC 1126
Query: 1081 TQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP 1140
QVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP
Sbjct: 1127 QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP 1186
Query: 1141 GKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP 1200
GKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHP
Sbjct: 1187 GKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTAMGTRLDFSTAFHP 1246
Query: 1201 QTDVQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYKNSYQATIGMAPFEALYGKCC 1260
QTD QTERLNQVLE MLRACALEFPGSWDSHLHLMEF Y NSYQATIGMAPFEALYGKCC
Sbjct: 1247 QTDGQTERLNQVLEYMLRACALEFPGSWDSHLHLMEFVYNNSYQATIGMAPFEALYGKCC 1306
Query: 1261 RSR--FAGVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKV 1320
RS + VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKV
Sbjct: 1307 RSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKV 1366
Query: 1321 FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 1380
FLKVAPMRGVLRFERRGKLSPRF+GPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Sbjct: 1367 FLKVAPMRGVLRFERRGKLSPRFIGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 1426
Query: 1381 YVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWE 1406
YVPDPSHVVDY+PL+IDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWE
Sbjct: 1427 YVPDPSHVVDYKPLKIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWE 1486
BLAST of IVF0001351 vs. NCBI nr
Match:
KAA0051357.1 (pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 2556 bits (6625), Expect = 0.0
Identity = 1317/1458 (90.33%), Postives = 1341/1458 (91.98%), Query Frame = 0
Query: 21 PAPAPAPAPAPAPAPAPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLW 80
PAPAPAPAP PAPAPA VPVAPQ VPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQ+W
Sbjct: 34 PAPAPAPAPVPAPAPALVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMW 93
Query: 81 LSSLETIFRYMKCPEDQKVQCAVFMLTDRDTAWWETTERMLGGDVSQITWQQFKESFYAK 140
LSSLETIFRYMKCPEDQKVQCAVFMLTDR TAWWETTERMLGGDVSQITWQQFKESFYAK
Sbjct: 94 LSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAK 153
Query: 141 FFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI 200
FFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI
Sbjct: 154 FFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDI 213
Query: 201 QGLVRAFRPATHADALRLAVDLSLQERANSSKAAGRGSTSGQKRKAEQQPVLVPQRNFRS 260
QGLVRAFRPATHADALRLAVDLSLQE ANSSK AGRGSTSGQKRKAEQQPV VPQRNFRS
Sbjct: 214 QGLVRAFRPATHADALRLAVDLSLQEMANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRS 273
Query: 261 GGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGQTADRCPLRLT 320
GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEG TADRCPLRLT
Sbjct: 274 GGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLT 333
Query: 321 GNAQNQGAGAPHQGRVFATNKTEAERAGTVVTG--PLRGRA------------------L 380
G AQNQGAGAPHQGRVFATN+TEAE+AGTVVTG P+ G +
Sbjct: 334 GIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAFV 393
Query: 381 TPCSISIYSFRGVMG-----SVCV----EVKACQIEIAGH----GLVVLDMLDFDVILGM 440
+ + + V+ C+ +VKACQIEIAGH L+VLDMLDFDVILGM
Sbjct: 394 SHARLEVEPLHHVLSVSTPSGECMLSREKVKACQIEIAGHVIEVTLIVLDMLDFDVILGM 453
Query: 441 DWLAANHASIDCSRKEVTFNPPSMASFKFKGEGSRSLPQVISAIRASKLLSQGTWGILAS 500
DWLAANHASIDCSRK+VTFNPPSMASFKFKG GS+SLPQVISAIRASKLLSQGTWGILAS
Sbjct: 454 DWLAANHASIDCSRKDVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILAS 513
Query: 501 VVDTREVDVSLSSEPVVRDYPDVFPEELPRLPPHREVEFAIELEPGTVPISRAPYRMAPA 560
VVDTRE DVSLSSEPVVRDYPDVFPEELP LPPHREVEFAIELEPGTVPISRAPYRMAPA
Sbjct: 514 VVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPA 573
Query: 561 ELKELKVQLQKLLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLP 620
ELKELKVQLQ+LLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLP
Sbjct: 574 ELKELKVQLQELLDKGFIRPNVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLP 633
Query: 621 RIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPA 680
RIDDLFDQLQGATVFSKIDLRSGY+QLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPA
Sbjct: 634 RIDDLFDQLQGATVFSKIDLRSGYNQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPA 693
Query: 681 VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEF 740
VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEF
Sbjct: 694 VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEF 753
Query: 741 WLKQVSFLGHVVSKAGVSVDPAKIEAVTDWTRPSTVSEVRSFLGLAGYYRRFVENFSRIA 800
WLKQVSFLGHVVSKA VSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENFSRIA
Sbjct: 754 WLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIA 813
Query: 801 TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVL 860
TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVL
Sbjct: 814 TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVL 873
Query: 861 MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 920
MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Sbjct: 874 MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 933
Query: 921 TQKKLNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 980
TQK+LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER
Sbjct: 934 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 993
Query: 981 AEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVGFSISSDGGL 1040
AEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV FS+SSDGGL
Sbjct: 994 AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL 1053
Query: 1041 VFERRLCVPSDSAVKTELLSEAHSSHFP-------------------------------- 1100
FE RLCVPSDSAVKTELL EAHSS F
Sbjct: 1054 SFEGRLCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKC 1113
Query: 1101 --CTQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH 1160
C QVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH
Sbjct: 1114 LVCQQVKEPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH 1173
Query: 1161 FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA 1220
FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA
Sbjct: 1174 FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA 1233
Query: 1221 FHPQTDVQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYKNSYQATIGMAPFEALYG 1280
FHPQ D QTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAY NSYQATIGMAPFEALYG
Sbjct: 1234 FHPQADGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 1293
Query: 1281 KCCRSR--FAGVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVG 1340
KCCRS + VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+
Sbjct: 1294 KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIR 1353
Query: 1341 DKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSM 1400
DKVFLKVAPM+GVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSM
Sbjct: 1354 DKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSM 1413
Query: 1401 LRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA 1409
LRKYVPDPSHVVDYEPLEIDENLSY EQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA
Sbjct: 1414 LRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEA 1473
BLAST of IVF0001351 vs. NCBI nr
Match:
KAA0040188.1 (pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 2511 bits (6507), Expect = 0.0
Identity = 1297/1432 (90.57%), Postives = 1317/1432 (91.97%), Query Frame = 0
Query: 39 PVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQK 98
P AP VVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQK
Sbjct: 188 PAAP-VVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQK 247
Query: 99 VQCAVFMLTDRDTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLE 158
VQCAVFMLTDR TAWWETTERMLGGDVSQI WQQFKESFY+KFFSASLRDA+RQEFLNLE
Sbjct: 248 VQCAVFMLTDRGTAWWETTERMLGGDVSQIMWQQFKESFYSKFFSASLRDAERQEFLNLE 307
Query: 159 QGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRL 218
QGDMTVEQYDAEFDMLS FAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRL
Sbjct: 308 QGDMTVEQYDAEFDMLSHFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRL 367
Query: 219 AVDLSLQERANSSKAAGRGSTSGQKRKAEQQPVLVPQRNFRSGGEFRRFQQKPFEAGEAA 278
AVDLSLQERANSSK AGRGSTSGQKRKAEQQPV VPQRNFRS GEFRRFQQKPFE GEAA
Sbjct: 368 AVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRSCGEFRRFQQKPFEVGEAA 427
Query: 279 RGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGQTADRCPLRLTGNAQNQGAGAPHQGRVFA 338
RGKPLCTTCGKHHLGRCLFGTRTCFKCRQEG TADRCPLRLTGNAQNQGAGAPHQGRVFA
Sbjct: 428 RGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFA 487
Query: 339 TNKTEAERAGTVVTG--PLRGR-AL----TPCSISIYSFRGVMGS--------------- 398
TNKTEAERAGTVVTG P+ G AL + S S S V+ +
Sbjct: 488 TNKTEAERAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVST 547
Query: 399 ---VCV----EVKACQIEIAGH----GLVVLDMLDFDVILGMDWLAANHASIDCSRKEVT 458
C+ +VKACQIEIA H L+VLDMLDFDVILGMDWLAANHASIDCSRKEVT
Sbjct: 548 PSRECMLSKEKVKACQIEIADHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVT 607
Query: 459 FNPPSMASFKFKGEGSRSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVR 518
FNPPSMASFKFKG GSRSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVR
Sbjct: 608 FNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVR 667
Query: 519 DYPDVFPEELPRLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQKLLDKGFI 578
DYPDVFPEELP LPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQ+LLDKGFI
Sbjct: 668 DYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFI 727
Query: 579 RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI 638
RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI
Sbjct: 728 RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI 787
Query: 639 DLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV 698
DLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVF+EFLDTFV
Sbjct: 788 DLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKEFLDTFV 847
Query: 699 IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVS 758
IVFIDDILIYSK EAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVS
Sbjct: 848 IVFIDDILIYSKMEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVS 907
Query: 759 VDPAKIEAVTDWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKA 818
VDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKA
Sbjct: 908 VDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKA 967
Query: 819 CEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHE 878
CEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLG VLMQQGKVVAYASRQLKSHE
Sbjct: 968 CEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGFVLMQQGKVVAYASRQLKSHE 1027
Query: 879 QNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKKLNMRQRRWLELVKD 938
QNYPTHDLELAAV+FALKIWRHYLYGEKIQIFTDHKSLKYFFTQK+LNMRQRRWLELVKD
Sbjct: 1028 QNYPTHDLELAAVIFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKD 1087
Query: 939 YDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTIQLAQLT 998
YDCEILYHPGKANVVADALSRKVSHSAALITR APLHRDLERAEIAVSVGA+T+QLAQLT
Sbjct: 1088 YDCEILYHPGKANVVADALSRKVSHSAALITRHAPLHRDLERAEIAVSVGAITMQLAQLT 1147
Query: 999 VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVGFSISSDGGLVFERRLCVPSDSAVKTEL 1058
VQPTLRQRII AQSNDPYLVEKRGLAEAGQA GFSISSDGGLVFERRLCVPSDSA+K EL
Sbjct: 1148 VQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVPSDSAIKIEL 1207
Query: 1059 LSEAHSSHF----------------------------------PCTQVKAPRQKPAGLLQ 1118
LSEAHSS F C QVKAPRQKPAGLLQ
Sbjct: 1208 LSEAHSSPFFMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQ 1267
Query: 1119 PLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYM 1178
PLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY ASKWAQLYM
Sbjct: 1268 PLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYIASKWAQLYM 1327
Query: 1179 SEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDVQTERLNQVLED 1238
SEIVRLHGVPVSIVSDRDARFTS+FWKGLQTAMGTRLDFSTAFHPQTD QTERLNQVLED
Sbjct: 1328 SEIVRLHGVPVSIVSDRDARFTSQFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLED 1387
Query: 1239 MLRACALEFPGSWDSHLHLMEFAYKNSYQATIGMAPFEALYGKCCRSR--FAGVGEQRLM 1298
MLRACALEFPGSWDSHLHLMEFAY NSYQATIGMAPFEALY KCCRS + VGEQRLM
Sbjct: 1388 MLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYDKCCRSLVCWGEVGEQRLM 1447
Query: 1299 GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFER 1358
GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFER
Sbjct: 1448 GPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFER 1507
Query: 1359 RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLE 1401
RGKLSPRFVG FEILERIGPVAYR+ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLE
Sbjct: 1508 RGKLSPRFVGSFEILERIGPVAYRVALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLE 1567
BLAST of IVF0001351 vs. NCBI nr
Match:
KAA0053234.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])
HSP 1 Score: 2506 bits (6494), Expect = 0.0
Identity = 1301/1454 (89.48%), Postives = 1320/1454 (90.78%), Query Frame = 0
Query: 1 MEQRFRDLIMQMREQQQPAPPAPAPAPAPAP----APAPAPVPVAPQVVPDQLSAEAKHL 60
MEQRF+DLIMQMREQQ+PA PAPAPAPAPAP APAPAPVPVAPQVVPDQLSAEAKHL
Sbjct: 47 MEQRFKDLIMQMREQQKPASPAPAPAPAPAPVPAPAPAPAPVPVAPQVVPDQLSAEAKHL 106
Query: 61 RDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVFMLTDRDTAWWET 120
RDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPED KVQCAVFMLTDR TAWWET
Sbjct: 107 RDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDPKVQCAVFMLTDRGTAWWET 166
Query: 121 TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR 180
TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR
Sbjct: 167 TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR 226
Query: 181 FAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGR 240
FAPEMIATEAARADKFVRGL LDIQGLVRAFRP THADALRLAVDLSLQERANSSK AGR
Sbjct: 227 FAPEMIATEAARADKFVRGLWLDIQGLVRAFRPPTHADALRLAVDLSLQERANSSKTAGR 286
Query: 241 GSTSGQKRKAEQQPVLVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCL 300
GSTSGQKRKAEQQPV VPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCL
Sbjct: 287 GSTSGQKRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCL 346
Query: 301 FGTRTCFKCRQEGQTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTG--P 360
FGTRTCFKCRQEG TADRCPLRLTGNA NQGAGAPHQGRVFATNKTEAE+AGTVVT P
Sbjct: 347 FGTRTCFKCRQEGHTADRCPLRLTGNAPNQGAGAPHQGRVFATNKTEAEKAGTVVTEVEP 406
Query: 361 LRGRALTPCSISIYSFRGVMGSVCVEVKACQIEIAGH----GLVVLDMLDFDVILGMDWL 420
L S+S S ++ VKACQIEIAGH L+VLDMLDFDVILGMDWL
Sbjct: 407 LHH----VLSVSTPSGECMLSKE--RVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWL 466
Query: 421 AANHASIDCSRKEVTFNPPSMASFKFKGEGSRSLPQVISAIRASKLLSQGTWGILASVVD 480
AANHASIDCSRKEVTFNPPSMASFKFKG GS+SLPQVISAI+ASKLLSQGTWGILASVVD
Sbjct: 467 AANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIKASKLLSQGTWGILASVVD 526
Query: 481 TREVDVSLSSEPVVRDYPDVFPEELPRLPPHREVEFAIELEPGTVPISRAPYRMAPAELK 540
TRE DVSLSSEPVVRDY DVFPEELP LPPHREVEFAIELE GTVPISRAPYRMAPAELK
Sbjct: 527 TREADVSLSSEPVVRDYSDVFPEELPGLPPHREVEFAIELESGTVPISRAPYRMAPAELK 586
Query: 541 ELKVQLQKLLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID 600
ELKVQLQ+LLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID RELNKVTVKNRYPLPRID
Sbjct: 587 ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDNRELNKVTVKNRYPLPRID 646
Query: 601 DLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFM 660
DLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFM
Sbjct: 647 DLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFM 706
Query: 661 DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLK 720
DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLK
Sbjct: 707 DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLK 766
Query: 721 QVSFLGHVVSKAGVSVDPAKIEAVTDWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPL 780
QVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPL
Sbjct: 767 QVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPL 826
Query: 781 TQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQ 840
TQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVP+GSGSFVIYSDA KKGLGCVLMQQ
Sbjct: 827 TQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPNGSGSFVIYSDAFKKGLGCVLMQQ 886
Query: 841 GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQK 900
GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQK
Sbjct: 887 GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQK 946
Query: 901 KLNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI 960
+LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Sbjct: 947 ELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK----------------------- 1006
Query: 961 AVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVGFSISSDGGLVFE 1020
LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAE QAV FS+SSDGGL+FE
Sbjct: 1007 ----------LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAETRQAVEFSLSSDGGLLFE 1066
Query: 1021 RRLCVPSDSAVKTELLSEAHSSHFP----------------------------------C 1080
RRLCVPSD AVKTELLSEAHSS F C
Sbjct: 1067 RRLCVPSDRAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVC 1126
Query: 1081 TQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP 1140
QVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTL+GFTVIWVVVDRLTKSAHF+P
Sbjct: 1127 QQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFLP 1186
Query: 1141 GKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHP 1200
GKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR TSKFWKGLQTAMGTRLDFSTAFHP
Sbjct: 1187 GKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARSTSKFWKGLQTAMGTRLDFSTAFHP 1246
Query: 1201 QTDVQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYKNSYQATIGMAPFEALYGKCC 1260
QTD QTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAY NSYQATIGMAPFEALYGKCC
Sbjct: 1247 QTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCC 1306
Query: 1261 RSRFAG--VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKV 1320
RS VGEQRLMGPELVQSTNEAIQKI+SRM TAQSRQKSYADVRRKDLEFEVGDKV
Sbjct: 1307 RSPVCWDEVGEQRLMGPELVQSTNEAIQKIKSRMRTAQSRQKSYADVRRKDLEFEVGDKV 1366
Query: 1321 FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 1380
FLKVAPMRGVLRFERRGKLS FVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Sbjct: 1367 FLKVAPMRGVLRFERRGKLSSHFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 1426
Query: 1381 YVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWE 1408
YVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLR+KEIPLVKVLWRNHRVEEATWE
Sbjct: 1427 YVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRSKEIPLVKVLWRNHRVEEATWE 1461
BLAST of IVF0001351 vs. NCBI nr
Match:
KAA0040695.1 (pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 2501 bits (6481), Expect = 0.0
Identity = 1295/1454 (89.06%), Postives = 1318/1454 (90.65%), Query Frame = 0
Query: 1 MEQRFRDLIMQMREQQQPAPPAPAPAPAPAPAPAPAPVP----VAPQVVPDQLSAEAKHL 60
MEQRFRDLIMQMREQQ+PA P PAP+PAPAPAPAPAPVP VAPQ VPDQLSAEAKHL
Sbjct: 135 MEQRFRDLIMQMREQQKPASPTPAPSPAPAPAPAPAPVPAPVPVAPQFVPDQLSAEAKHL 194
Query: 61 RDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVFMLTDRDTAWWET 120
RDFRKYNPTTFDGSLEDPTRAQ+WLSSLETIFRYMKCPEDQKVQCAVFMLTDR TAWWET
Sbjct: 195 RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET 254
Query: 121 TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSR 180
TERMLGGDVSQITWQQFKESFYAKFFSASLRDAK+QEFLNLEQGDMTVEQYDAEFDMLSR
Sbjct: 255 TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKQQEFLNLEQGDMTVEQYDAEFDMLSR 314
Query: 181 FAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGR 240
FAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGR
Sbjct: 315 FAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGR 374
Query: 241 GSTSGQKRKAEQQPVLVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCL 300
GSTSGQKRKAEQ PV VPQRNFR GGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCL
Sbjct: 375 GSTSGQKRKAEQHPVPVPQRNFRPGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCL 434
Query: 301 FGTRTCFKCRQEGQTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTG--P 360
F TRTCFKCRQEG TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTE E+AGTVVTG P
Sbjct: 435 FETRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEVEKAGTVVTGTLP 494
Query: 361 LRGRALTPC--SISIYSFRGVMGSVCVEVKACQIEIAGH----GLVVLDMLDFDVILGMD 420
+ G S S +SF + S V +IEIAGH L+VLDMLDFDVILGMD
Sbjct: 495 VLGHYALVLFDSGSSHSF---ISSAFVLHARLEIEIAGHVIEVTLIVLDMLDFDVILGMD 554
Query: 421 WLAANHASIDCSRKEVTFNPPSMASFKFKGEGSRSLPQVISAIRASKLLSQGTWGILASV 480
WLAANHASIDCSRKEVTFNPPS+ASFKFKG GS+SLPQVISAIRASKLL+QGTWGIL SV
Sbjct: 555 WLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAIRASKLLNQGTWGILVSV 614
Query: 481 VDTREVDVSLSSEPVVRDYPDVFPEELPRLPPHREVEFAIELEPGTVPISRAPYRMAPAE 540
VDTREVDVSLSSEPVVRDYPDVFP+ELP LPPHREVEFAIELEPGTVPISRAPYRMAPAE
Sbjct: 615 VDTREVDVSLSSEPVVRDYPDVFPDELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAE 674
Query: 541 LKELKVQLQKLLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 600
LKELKVQLQ+LLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR
Sbjct: 675 LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 734
Query: 601 IDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAV 660
IDDLFDQLQGATVFS+IDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAV
Sbjct: 735 IDDLFDQLQGATVFSEIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAV 794
Query: 661 FMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFW 720
FMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTL DNKLYAKFSKCEFW
Sbjct: 795 FMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLWDNKLYAKFSKCEFW 854
Query: 721 LKQVSFLGHVVSKAGVSVDPAKIEAVTDWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT 780
LKQVSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEVRSFLGLAGYYR+FVENFSRIAT
Sbjct: 855 LKQVSFLGHVVSKAGVSVDPAKIEAVTGWARPSTVSEVRSFLGLAGYYRQFVENFSRIAT 914
Query: 781 PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 840
PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV DGSGSFVIYSDASKKGLGCVLM
Sbjct: 915 PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVRDGSGSFVIYSDASKKGLGCVLM 974
Query: 841 QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 900
QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT
Sbjct: 975 QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 1034
Query: 901 QKKLNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 960
QK+LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA
Sbjct: 1035 QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 1094
Query: 961 EIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVGFSISSDGGLV 1020
EIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA FS+SSDGGL+
Sbjct: 1095 EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLL 1154
Query: 1021 FERRLCVPSDSAVKTELLSEAHSSHFP--------------------------------- 1080
FER LCVPSDSAVKTELLSEAHSS F
Sbjct: 1155 FERHLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWHNMKREVAEFVSRCL 1214
Query: 1081 -CTQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHF 1140
C QVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTK AHF
Sbjct: 1215 VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKLAHF 1274
Query: 1141 VPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAF 1200
VPGKSTYTASKWAQLYMSEIVRLHGVPVSIVS+RDARFTSKFWKGLQTAMGTRLDFSTAF
Sbjct: 1275 VPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSNRDARFTSKFWKGLQTAMGTRLDFSTAF 1334
Query: 1201 HPQTDVQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYKNSYQATIGMAPFEALYGK 1260
HPQTD QTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAY NSYQATIGMAPFEALYGK
Sbjct: 1335 HPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGK 1394
Query: 1261 CCRSRFAGVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKV 1320
CCRS GE DVRRKDLEFEVGDKV
Sbjct: 1395 CCRSPVCW-GE---------------------------------VDVRRKDLEFEVGDKV 1454
Query: 1321 FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 1380
FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL LPPSLSTVHDV HVSMLRK
Sbjct: 1455 FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLVLPPSLSTVHDVIHVSMLRK 1514
Query: 1381 YVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWE 1408
YVPDPSHVVDYEPLEIDENLSY EQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWE
Sbjct: 1515 YVPDPSHVVDYEPLEIDENLSYAEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWE 1551
BLAST of IVF0001351 vs. TAIR 10
Match:
ATMG00860.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 118.6 bits (296), Expect = 4.0e-26
Identity = 58/131 (44.27%), Postives = 82/131 (62.60%), Query Frame = 0
Query: 685 HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTDWTRPST 744
HL +VLQ ++ YA KC F Q+++LG H++S GVS DPAK+EA+ W P
Sbjct: 3 HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62
Query: 745 VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV 804
+E+R FLGL GYYRRFV+N+ +I PLT+L +K + W++ +F+ LK + T PV
Sbjct: 63 TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122
Query: 805 LTVPDGSGSFV 814
L +PD FV
Sbjct: 123 LALPDLKLPFV 132
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P0CT41 | 2.0e-131 | 31.82 | Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... | [more] |
P0CT34 | 2.0e-131 | 31.82 | Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... | [more] |
P0CT35 | 2.0e-131 | 31.82 | Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... | [more] |
P0CT36 | 2.0e-131 | 31.82 | Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... | [more] |
P0CT37 | 2.0e-131 | 31.82 | Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7U330 | 0.0e+00 | 91.89 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43... | [more] |
A0A5A7UAA8 | 0.0e+00 | 89.73 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55... | [more] |
A0A5A7TB42 | 0.0e+00 | 90.40 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold11... | [more] |
A0A5A7UDB1 | 0.0e+00 | 89.41 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold10... | [more] |
A0A5A7TGX4 | 0.0e+00 | 88.92 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold52... | [more] |
Match Name | E-value | Identity | Description | |
ATMG00860.1 | 4.0e-26 | 44.27 | DNA/RNA polymerases superfamily protein | [more] |