IVF0001317 (gene) Melon (IVF77) v1

Overview


Name	IVF0001317
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	RING-CH-type domain-containing protein
Location	chr04: 31526434 .. 31528746 (-)
RNA-Seq Expression	IVF0001317
Synteny	IVF0001317

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGCCTCAGGAAGTTTCCCAGTCCGACATTGATTTGGAACAGGGAATCATCGGCGGTCTGTCAGCGGTAGTGATTTGAGCGCAGATTGTAGCGTCTATTTCTCTGACGCCGACGAGGGTTCGTGTTATTCTCAGTTTTTTTCGACCAACGGTGGTTCTTACGACGAGTATAGGTTTGCTTTCGTTTCTCAGCCGGAGGTTGGGGTTGTTCCGGATTCTCGGCGAGTTTCGTCGGTTTCGGATCGTTCTGTGGAGGTTGAAAATGAAAATGGGATTACTGAAATTAAGGTGCATTCAGCTAAAGTAGAGAGGGATTGCAGGATTTGTCATTTGGGTTTGGAGAGTAATAGCCAAGAATCTGGAATCCCAATCGAATTGGGTTGTTCGTGCAAGGATGATTTAGCTGCTGCTCACAAGCATTGTGCTGAAACCTGGTTCAAAATTAAAGGAAATAAGTAAGTCTAATCCTTGATTTTCATTAAGTTTTGATGTTTTTTCTTTCCATGGATTCTGATCACATTTTTCACTCGGGCTATGTTTATGCTATGCTTCTTAGTTCTTTTGAGTTCATATTTTCATATTATTTTCTTGCTGCTCTTCTTTGGTCTGTTCTTGTGGTGAGCATCTTCTGTGTTAATCCTCATGGGGTTGGACTATTCACAAATTTAAATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTTAGACTTAAACATTACCTTTTCTTAGCTTTAAGGTAAACCCCTCAGTGTAGTGAGCTTGAATGTTGCAGATATAAGGATTCTTACTTAGAGGAAAAGCTTAGACGTATGACAAGTAATAAGAGTAAAGCATACGAAAGTGCATTTATGCATCTCCAAGCAAGTTACACTGATTATTCCTTCTTCCTTGGCGTTTTTCTGATGGCTTAGGAATCTCTTTCTTTCTCTCACCCCCCGCCCCGTGTAGTGGGTACTCCATTGTTGGAAGCATAATTCAGTTGAAGTGGAGAAAAGTTATATTGATCACTCAGCAGATCACTTTAAGATCTCTAGTTTCTTGATATGCCAAGTTTGCAGTTTTCCCAACCTGTTTAGTCACTCAATTAACTCCTTCAGTTCCTAACAAACGGCAGTCCATCTTCTGTTAACCAACTGTCGGTTCCCCCACTAATATTGATCATGGAACTTTGTCTCAGTACATTTCTAGTGAATCTATTTCTCATCGATCTGATTCATGCCCTTGATCTGACTTTCCTTACAGTACAATAGTTTTCGTTCCAATTGCTTGGCTCAATCCAAGTCACTACTTAAGAGTTCATTGTACTGAGCTGCTTTAGAAGCGCACAATCCATAATGCTTCTCCAGGGAAAACAATGTTGTAGAGTTTGTTGAATGTCGTACGTCTGCTGTTATATATAGCCAAAAGAAAGATGTCCATAAAGAGTTTTAAGGCTGTCAGGATGTAAGGTTAAGGGTTATGCGATCTGTTGTGGAAGCAAGATGATGATCAATATTTCCTTTGATGTTAAATTACTTTTCCAATATCAATAATGAATAGAATATGTCAGCACACATAGGAAATAGGGTTATTTTTTAATCACCGAGAAACAAACAGACAATTTGTTTCTTGCACTTGGCTCTGAATTTCAATGACAATTGATTCGACTCCACTCAGAAAAAGGTTCCTAGTGTTATTCCTGGACAAAGATTCTGAACATAGGTGATTTTAGCCATCTTTAATCAACTATTTATTGTGGGTTTCGATCAAATGTTTTATTAATTGGTGGCATTGGATTGGGACCGGGCTGTATTACATGATAGATTTACACCATGTGATTTTTGTTTTGACAAATGACAATTCTTCAGTTTCTGTTCGATGCTGGAAAATGGACAAGGGCATTTGCATTTTGTTCCTTTAGCTACTTTAATCATTATTCCTAACCTTCTTGAATCTTATTGTCAGGACATGCGAGATTTGTCATTCCATTGCTCGAAATATTCTCGGACCAAATGAGGTTGAGCTAACAGAGCAGTCTAATGAATCCAACAACGCCTCCTCGACAACTACAGTTGCTGCATCAATTCCCTCATCAGATAGCCATAGTTTCTGGCGTGGGCACCGGTTTCTGAATTTTCTGCTCGCTTGTATGGTATTTGCTTTCGTTATATCTTGGCTGTTTCACTTCAATGTGCCCTCGTAAACAAATTGTTGTGTAGAAGAAAGTAGTATCGAAACGGGAAAATCAGAACAAGGAACTTGCAGAATTTACAGCTGCAAAAGGCCCTCCAGAGAATTGCCTACAGAGTGTCCATAACTTCACATAG

mRNA sequence

ATGGGGCCTCAGGAAGTTTCCCAGTCCGACATTGATTTGGAACAGGGAATCATCGGCGGTCTGTCAGCGCCGGAGGTTGGGGTTGTTCCGGATTCTCGGCGAGTTTCGTCGGTTTCGGATCGTTCTGTGGAGGTTGAAAATGAAAATGGGATTACTGAAATTAAGGTGCATTCAGCTAAAGTAGAGAGGGATTGCAGGATTTGTCATTTGGGTTTGGAGAGTAATAGCCAAGAATCTGGAATCCCAATCGAATTGGGTTGTTCGTGCAAGGATGATTTAGCTGCTGCTCACAAGCATTGTGCTGAAACCTGGTTCAAAATTAAAGGAAATAAGACATGCGAGATTTGTCATTCCATTGCTCGAAATATTCTCGGACCAAATGAGGTTGAGCTAACAGAGCAGTCTAATGAATCCAACAACGCCTCCTCGACAACTACAGTTGCTGCATCAATTCCCTCATCAGATAGCCATAGTTTCTGGCGTGGGCACCGGTTTCTGAATTTTCTGCTCGCTTGTATGAAGAAAGTAGTATCGAAACGGGAAAATCAGAACAAGGAACTTGCAGAATTTACAGCTGCAAAAGGCCCTCCAGAGAATTGCCTACAGAGTGTCCATAACTTCACATAG

Coding sequence (CDS)

ATGGGGCCTCAGGAAGTTTCCCAGTCCGACATTGATTTGGAACAGGGAATCATCGGCGGTCTGTCAGCGCCGGAGGTTGGGGTTGTTCCGGATTCTCGGCGAGTTTCGTCGGTTTCGGATCGTTCTGTGGAGGTTGAAAATGAAAATGGGATTACTGAAATTAAGGTGCATTCAGCTAAAGTAGAGAGGGATTGCAGGATTTGTCATTTGGGTTTGGAGAGTAATAGCCAAGAATCTGGAATCCCAATCGAATTGGGTTGTTCGTGCAAGGATGATTTAGCTGCTGCTCACAAGCATTGTGCTGAAACCTGGTTCAAAATTAAAGGAAATAAGACATGCGAGATTTGTCATTCCATTGCTCGAAATATTCTCGGACCAAATGAGGTTGAGCTAACAGAGCAGTCTAATGAATCCAACAACGCCTCCTCGACAACTACAGTTGCTGCATCAATTCCCTCATCAGATAGCCATAGTTTCTGGCGTGGGCACCGGTTTCTGAATTTTCTGCTCGCTTGTATGAAGAAAGTAGTATCGAAACGGGAAAATCAGAACAAGGAACTTGCAGAATTTACAGCTGCAAAAGGCCCTCCAGAGAATTGCCTACAGAGTGTCCATAACTTCACATAG

Protein sequence

MGPQEVSQSDIDLEQGIIGGLSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACMKKVVSKRENQNKELAEFTAAKGPPENCLQSVHNFT

Homology

[Close]

BLAST of IVF0001317 vs. ExPASy TrEMBL
Match: A0A5D3DN10 (E3 ubiquitin-protein ligase MARCH2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001190 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 6.2e-85
Identity = 176/243 (72.43%), Postives = 183/243 (75.31%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQG---------------------------------IIGG------- 60
           MGPQEVSQSDIDLEQG                                   GG       
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  --LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
             +S PEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACMKKVVSKRENQNKELAEFTAAKGPPE 202
           NNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACM+K ++K    ++ +  F    G  E
Sbjct: 181 NNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACMEKPINKLCAFSRNM--FRPGVGEDE 240

[Close]

BLAST of IVF0001317 vs. ExPASy TrEMBL
Match: A0A1S3B5A7 (uncharacterized protein LOC103486339 OS=Cucumis melo OX=3656 GN=LOC103486339 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 4.5e-83
Identity = 169/215 (78.60%), Postives = 170/215 (79.07%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQG---------------------------------IIGG------- 60
           MGPQEVSQSDIDLEQG                                   GG       
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  --LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
             +S PEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 174
           SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

[Close]

BLAST of IVF0001317 vs. ExPASy TrEMBL
Match: A0A0A0LAC9 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G733180 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.7e-80
Identity = 166/215 (77.21%), Postives = 167/215 (77.67%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQG---------------------------------IIGG------- 60
           MGPQEVSQSDIDLEQG                                   GG       
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  --LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
             +S PEVGVV DSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 174
           SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

[Close]

BLAST of IVF0001317 vs. ExPASy TrEMBL
Match: A0A6J1CWG7 (uncharacterized protein LOC111015024 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015024 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 7.6e-75
Identity = 157/215 (73.02%), Postives = 161/215 (74.88%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQG---------------------------------IIGG------- 60
           M   EVSQSDIDLEQG                                   GG       
Sbjct: 1   MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  --LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
             ++ PEVGVV DSRRVSSVSDRSVEVENENGITEIKVH AKVERDCRICHLGLESNSQE
Sbjct: 61  AFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 174
           SGIPIELGCSCKDDLAAAHKHCAETWFKI+GNKTCEICHSIARNILGP+EVELTEQS ES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTES 180

[Close]

BLAST of IVF0001317 vs. ExPASy TrEMBL
Match: A0A6J1FUW7 (uncharacterized protein LOC111447072 OS=Cucurbita moschata OX=3662 GN=LOC111447072 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.5e-73
Identity = 155/216 (71.76%), Postives = 160/216 (74.07%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQG---------------------------------IIGG------- 60
           M P +VSQSDIDLEQG                                   GG       
Sbjct: 1   MAPPQVSQSDIDLEQGDHRRSVSGSELSADCSVYFSDADEGSCYSQFYSTNGGSYDEYRF 60

Query: 61  --LSAPEVG-VVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQ 120
             +S P VG VV DSRR+SS SDRSVEVENENGITEIKVH  KVERDCRICHLGLESNSQ
Sbjct: 61  AFVSQPGVGVVVSDSRRLSSASDRSVEVENENGITEIKVHLGKVERDCRICHLGLESNSQ 120

Query: 121 ESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNE 174
           ESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHS+ARNILGPNEVE TEQSNE
Sbjct: 121 ESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSVARNILGPNEVESTEQSNE 180

[Close]

BLAST of IVF0001317 vs. NCBI nr
Match: TYK25001.1 (E3 ubiquitin-protein ligase MARCH2-like [Cucumis melo var. makuwa])

HSP 1 Score: 321 bits (822), Expect = 2.44e-108
Identity = 176/243 (72.43%), Postives = 183/243 (75.31%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQG---------------------------------IIGG------- 60
           MGPQEVSQSDIDLEQG                                   GG       
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  --LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
             +S PEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACMKKVVSKRENQNKELAEFTAAKGPPE 201
           NNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACM+K ++K    ++ +  F    G  E
Sbjct: 181 NNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACMEKPINKLCAFSRNM--FRPGVGEDE 240

[Close]

BLAST of IVF0001317 vs. NCBI nr
Match: XP_008442485.1 (PREDICTED: uncharacterized protein LOC103486339 [Cucumis melo])

HSP 1 Score: 315 bits (807), Expect = 2.52e-106
Identity = 169/215 (78.60%), Postives = 170/215 (79.07%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQG---------------------------------IIGG------- 60
           MGPQEVSQSDIDLEQG                                   GG       
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  --LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
             +S PEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 173
           SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

[Close]

BLAST of IVF0001317 vs. NCBI nr
Match: XP_038904640.1 (uncharacterized protein LOC120090971 [Benincasa hispida])

HSP 1 Score: 309 bits (791), Expect = 6.86e-104
Identity = 167/215 (77.67%), Postives = 168/215 (78.14%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQG---------------------------------IIGG------- 60
           MGPQEVSQSDIDLEQG                                   GG       
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  --LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
             +S PEVGVV DSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 173
           SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

[Close]

BLAST of IVF0001317 vs. NCBI nr
Match: XP_004137745.1 (uncharacterized protein LOC101218915 [Cucumis sativus] >KGN58813.1 hypothetical protein Csa_002551 [Cucumis sativus])

HSP 1 Score: 306 bits (783), Expect = 1.13e-102
Identity = 166/215 (77.21%), Postives = 167/215 (77.67%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQG---------------------------------IIGG------- 60
           MGPQEVSQSDIDLEQG                                   GG       
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  --LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
             +S PEVGVV DSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 173
           SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

[Close]

BLAST of IVF0001317 vs. NCBI nr
Match: XP_022145623.1 (uncharacterized protein LOC111015024 isoform X2 [Momordica charantia])

HSP 1 Score: 288 bits (736), Expect = 1.60e-95
Identity = 157/215 (73.02%), Postives = 161/215 (74.88%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQG---------------------------------IIGG------- 60
           M   EVSQSDIDLEQG                                   GG       
Sbjct: 1   MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  --LSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
             ++ PEVGVV DSRRVSSVSDRSVEVENENGITEIKVH AKVERDCRICHLGLESNSQE
Sbjct: 61  AFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 173
           SGIPIELGCSCKDDLAAAHKHCAETWFKI+GNKTCEICHSIARNILGP+EVELTEQS ES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTES 180

[Close]

BLAST of IVF0001317 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 176.8 bits (447), Expect = 1.8e-44
Identity = 91/167 (54.49%), Postives = 111/167 (66.47%), Query Frame = 0


Query: 7   SQSDIDLEQGIIGGLSAPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCR 66
           S  D D E     G    E  +V D  R S+ S  SVE++ E G+ E  VH ++ ERDCR
Sbjct: 21  SGCDGDGEPRRSSGAVEKEEEIVKDEERRSNASVCSVEIDLELGLPEKVVHLSQSERDCR 80

Query: 67  ICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGP 126
           ICH+ L++ + ESG+PIELGCSCK DLAAAHKHCAETWFKIKGNK CE+C SIA N++G 
Sbjct: 81  ICHMSLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGSIAGNVVGS 140

Query: 127 NEVELTEQSNESNNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACM 174
            EVE  E  NE+N   + T   +     +  SFW+GHRFLNFLLACM
Sbjct: 141 VEVESEESRNEANGVENLTLRTSGPRLVEGRSFWQGHRFLNFLLACM 187

[Close]

BLAST of IVF0001317 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-30
Identity = 64/114 (56.14%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 62  ERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIAR 121
           E+DCRICHLGLES+  E G P+ LGCSCKDDL   HK CA+TWFKIKGNKTCEIC SIA+
Sbjct: 75  EKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGNKTCEICRSIAQ 134

Query: 122 NILG-PNEV-ELTEQSNESNNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACM 174
           N     NE+ + T ++N  +  +  T    +   SD     RG+RFLNFLL CM
Sbjct: 135 NFFKVDNEIGQTTVETNVDDVEAGNTPTMVATSDSDDRRLCRGNRFLNFLLTCM 188

[Close]

BLAST of IVF0001317 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 5.3e-28
Identity = 70/144 (48.61%), Postives = 92/144 (63.89%), Query Frame = 0


Query: 32  SRRVSSV-SDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQESGIPIELGCSCK 91
           SR+VSSV S  S E+++++        +A  E+DCRICHLG+E++    G  IELGCSCK
Sbjct: 57  SRKVSSVMSPSSSEIDDDDA-------TAPPEKDCRICHLGVETS---GGGAIELGCSCK 116

Query: 92  DDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNE-VELTEQSNESNNASSTTTVAA 151
           DDLA AH+ CAETWFKIKG+KTCEIC S+ARN+ G NE V  T +  E  N   T     
Sbjct: 117 DDLAVAHRQCAETWFKIKGDKTCEICQSVARNVGGANEMVGSTMEERELRNGEETAAGEG 176

Query: 152 SIPSSDSHSFWRGHRFLNFLLACM 174
              ++   + W+  R +N +LACM
Sbjct: 177 G-GATVVENRWQPQRVVNLVLACM 189

[Close]

BLAST of IVF0001317 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-23
Identity = 73/202 (36.14%), Postives = 94/202 (46.53%), Query Frame = 0


Query: 7   SQSDIDLEQGIIGGLSAPEVGVVP--DSRRVSSVSDRSVEVENENGITEIKVHSAKVERD 66
           S S +DLE    GG+ APE  +      RR      R  + + + G            RD
Sbjct: 36  SLSQVDLES---GGVPAPEKQLHSGGKKRRTRRRKRRKKKKKKKGG------------RD 95

Query: 67  CRICHLGLESNSQES-------------------------------GIPIELGCSCKDDL 126
           CRICHL LE+N +                                 G+P++LGCSCK DL
Sbjct: 96  CRICHLPLETNKEAEDEDEEEEDDSDDDEDEEDEEEEEEEEEEEYYGLPLQLGCSCKGDL 155

Query: 127 AAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNESNNASSTTTVAA--SI 174
             AH  CAETWFKIKGN TCEIC ++A N+ G       EQSN  + AS+ +  AA  S+
Sbjct: 156 GVAHSKCAETWFKIKGNMTCEICGAMALNVAG-------EQSNPESTASTHSQAAAGQSL 215

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BLAST of IVF0001317 vs. TAIR 10
Match: AT5G01070.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 89.0 bits (219), Expect = 5.0e-18
Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = 0


Query: 62  ERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNK 112
           E+DCRICHLGLES+  E G P+ LGCSCKDDL   HK CA+TWFKIKGNK
Sbjct: 75  EKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGNK 124

The following BLAST results are available for this feature:

BLAST of IVF0001317 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0001317 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DN10	6.2e-85	72.43	E3 ubiquitin-protein ligase MARCH2-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3B5A7	4.5e-83	78.60	uncharacterized protein LOC103486339 OS=Cucumis melo OX=3656 GN=LOC103486339 PE=...	[more]
A0A0A0LAC9	2.7e-80	77.21	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G73318...	[more]
A0A6J1CWG7	7.6e-75	73.02	uncharacterized protein LOC111015024 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1FUW7	2.5e-73	71.76	uncharacterized protein LOC111447072 OS=Cucurbita moschata OX=3662 GN=LOC1114470...	[more]

BLAST of IVF0001317 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK25001.1	2.44e-108	72.43	E3 ubiquitin-protein ligase MARCH2-like [Cucumis melo var. makuwa]	[more]
XP_008442485.1	2.52e-106	78.60	PREDICTED: uncharacterized protein LOC103486339 [Cucumis melo]	[more]
XP_038904640.1	6.86e-104	77.67	uncharacterized protein LOC120090971 [Benincasa hispida]	[more]
XP_004137745.1	1.13e-102	77.21	uncharacterized protein LOC101218915 [Cucumis sativus] >KGN58813.1 hypothetical ...	[more]
XP_022145623.1	1.60e-95	73.02	uncharacterized protein LOC111015024 isoform X2 [Momordica charantia]	[more]

BLAST of IVF0001317 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05830.1	1.8e-44	54.49	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.2	1.1e-30	56.14	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G37950.1	5.3e-28	48.61	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	1.4e-23	36.14	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.1	5.0e-18	74.00	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 64..117 e-value: 1.1E-17 score: 74.7
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 65..116 e-value: 1.1E-9 score: 38.2
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 57..123 score: 18.613285
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 51..124 e-value: 6.5E-15 score: 56.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..156
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 30..173
None	No IPR available	PANTHER	PTHR46214:SF5	OS01G0850200 PROTEIN	coord: 30..173
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 65..117 e-value: 2.80084E-12 score: 57.3372
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 62..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0001317.2	IVF0001317.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding