IVF0001216 (gene) Melon (IVF77) v1

Overview


Name	IVF0001216
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein MNN4-like
Location	chr04: 13219438 .. 13220519 (+)
RNA-Seq Expression	IVF0001216
Synteny	IVF0001216

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTGACGTTAACTACACGGTTAACCTAAACCCTATCCATAGTTAAGTGTGGCTATTTAAACCCTTTGGAAATCCCTATTTCAAACTTTCAGCATCTTGAGCTCTCATCAAAGAACTTCAACTCTTCGATCTTCTTCTACATTGAACCAAGTAAGCTCTCACCTCCTCACTTTCGTTTCTTGCCTAGTTTACTCTATACCCTTACCTGAAAATGGATGGAAACAAGAGTGATGATCATTCTGGAGAGAAAGAAACACTAACTAAGGCACCCGTCCAACAGAGATACTGAAATTGTGCGTTCTGATGACCCTATGTCGGAGCAAGCCCAGTTGGCTTTCTCAATGCAAGATGAAGCTTTACCTGATGTGAGAGAAGTATTCGAAACAGAGGGATGAAATCCTTTCAGCTTTAGAGGAAAAGAGGTGCCTATGACTGATGAAAACATAGGATTGATGATGAACTTACTTATGGAAGACAATAATAGACGAGCAAAGACAAAAGAAAAAGCTGACAGGAAAAAGAAAGAGGATGAAGAGAGAGAGAAGAGAAAAGGCCGAAGATGAGGAGAGGAAGAAAGTAGAAGAAGAGCTGAAAAGGCAAGAAGATGAAAGAAAGAAAGAAGAAGAAAAACAAAAAGAAAAAAGAATGAGAAAGAAAAGAGAAAGATCTAGACGAAGAAGATAATTGCGAGGAGGAGCAAGAGGAAAGTATGCGAGAAATAGGAGCTTCCTTGCCGATAGTAGAAGCAAAGTTTGAAAGAGTGGCAGAGAAGGCCCAGAAGAAGACAGAACAAGTGAAGTCTAGAGTACTCAAGATTAAGGAGCAGACGCAAGGTGTTAAGGCCTTGGTGGAAGAAAAGCTCAAAGCTAAAATGAAGGGATGGAAGGAGCTCCGAAGTAAGGTTGAGGAGGTAGCTTTCTCTGTGGAGAAGAGCAAAGAAAAAGGGAAGGAAAAGACTTTGAGGAATTTTGCGAGGAGGCCTCAAAAGAAATTAAGGAGTTGAGTTCTTTGAAGGATGATGCCCTAAAGCTAAGGAAAAAGAGAAGAGTAAAAATGAAGAAGAAAACTTTAAGGGAGTAG

mRNA sequence

ATGCGTGACGTTAACTACACGGTTAACCTAAACCCTATCCATAAAAGAAAAGAGAAAGATCTAGACGAAGAAGATAATTGCGAGGAGGAGCAAGAGGAAAGTATGCGAGAAATAGGAGCTTCCTTGCCGATAGTAGAAGCAAAGTTTGAAAGAGTGGCAGAGAAGGCCCAGAAGAAGACAGAACAAGTGAAGTCTAGAGTACTCAAGATTAAGGAGCAGACGCAAGGTGTTAAGGCCTTGGTGGAAGAAAAGCTCAAAGCTAAAATGAAGGGATGGAAGGAGCTCCGAAGTAAGGTTGAGGAGGAGGCCTCAAAAGAAATTAAGGAGTTGAGTTCTTTGAAGGATGATGCCCTAAAGCTAAGGAAAAAGAGAAGAGTAAAAATGAAGAAGAAAACTTTAAGGGAGTAG

Coding sequence (CDS)

ATGCGTGACGTTAACTACACGGTTAACCTAAACCCTATCCATAAAAGAAAAGAGAAAGATCTAGACGAAGAAGATAATTGCGAGGAGGAGCAAGAGGAAAGTATGCGAGAAATAGGAGCTTCCTTGCCGATAGTAGAAGCAAAGTTTGAAAGAGTGGCAGAGAAGGCCCAGAAGAAGACAGAACAAGTGAAGTCTAGAGTACTCAAGATTAAGGAGCAGACGCAAGGTGTTAAGGCCTTGGTGGAAGAAAAGCTCAAAGCTAAAATGAAGGGATGGAAGGAGCTCCGAAGTAAGGTTGAGGAGGAGGCCTCAAAAGAAATTAAGGAGTTGAGTTCTTTGAAGGATGATGCCCTAAAGCTAAGGAAAAAGAGAAGAGTAAAAATGAAGAAGAAAACTTTAAGGGAGTAG

Protein sequence

MRDVNYTVNLNPIHKRKEKDLDEEDNCEEEQEESMREIGASLPIVEAKFERVAEKAQKKTEQVKSRVLKIKEQTQGVKALVEEKLKAKMKGWKELRSKVEEEASKEIKELSSLKDDALKLRKKRRVKMKKKTLRE

Homology

[Close]

BLAST of IVF0001216 vs. ExPASy TrEMBL
Match: A0A5A7T8V8 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001560 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.3e-35
Identity = 101/123 (82.11%), Postives = 101/123 (82.11%), Query Frame = 0


Query: 35  MREIGASLPIVEAKFERVAEKAQKKTEQVKSRVLKIKEQTQGVKALVEEKLKAKMKGWKE 94
           MREIGASLPIVEAKFERVAEKAQKKTEQVKSRVLKIKEQTQGVKALVEEKLKAKMKGWKE
Sbjct: 1   MREIGASLPIVEAKFERVAEKAQKKTEQVKSRVLKIKEQTQGVKALVEEKLKAKMKGWKE 60

Query: 95  LRSKVE----------------------EEASKEIKELSSLKDDALKLRKKRRVKMKKKT 136
           LRSKVE                      EEASKEIKELSSLKDDALKLRKKRRVKMKKKT
Sbjct: 61  LRSKVEEVAFSVEKSKEKGKEKTFEEFCEEASKEIKELSSLKDDALKLRKKRRVKMKKKT 120

[Close]

BLAST of IVF0001216 vs. ExPASy TrEMBL
Match: A0A5D3BFC8 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00900 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.1e-10
Identity = 59/125 (47.20%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 15  KRKEKDLDEEDNCE--EEQEESMREIGASLPIVEAKFERVAEKAQKKTEQVKSRVLKIKE 74
           ++K+K ++E+ + E  EEQEE + EI AS+PI + KF+RV+ KAQK+ E+VK+R+LKIK 
Sbjct: 95  EKKKKKIEEKVHKEEQEEQEEEVCEISASMPIAKIKFDRVSRKAQKEKEKVKTRLLKIKV 154

Query: 75  QTQGVKALVEEKLKAKMKGWKELRSKVE--------------------EEASKEIKELSS 118
           + QGVKAL EEK + K+K  KEL +KV                     EE  KEI ELS 
Sbjct: 155 KAQGVKALAEEKKEIKLKEQKELLNKVNKLALSVENSKEKEKTFEEYCEEFEKEISELSP 214

[Close]

BLAST of IVF0001216 vs. ExPASy TrEMBL
Match: A0A5A7U502 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00280 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.3e-08
Identity = 53/112 (47.32%), Postives = 72/112 (64.29%), Query Frame = 0


Query: 43  PIVEAKFERVAEKAQKKTEQVKSRVLKIKEQTQGVKALVEEKLKAKMKGWKELRSKVE-- 102
           PI + +FE +A+K Q+KT++VKSR+LK+K + Q VKALVEEK +AK KG +EL SKVE  
Sbjct: 59  PIAKIEFESLAKKTQEKTKKVKSRLLKLKVKAQRVKALVEEKEEAKTKGREELLSKVEKV 118

Query: 103 ------------------EEASKEIKELSSLKDDALKLRKKRRVKMKKKTLR 135
                             EE  KEI+ L  L+ +A + +KKR+V MKKKTL+
Sbjct: 119 VHSAKKDKGKEKTHEEHCEEFEKEIENLCPLEKEAPRPKKKRKVTMKKKTLK 170

[Close]

BLAST of IVF0001216 vs. ExPASy TrEMBL
Match: A0A5A7V1I3 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005890 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 9.9e-07
Identity = 45/89 (50.56%), Postives = 63/89 (70.79%), Query Frame = 0


Query: 16  RKEKD---LDEEDNCEEEQEESMREIGASLPIVEAKFERVAEKAQKKTEQVKSRVLKIKE 75
           +KEKD     E+   EE Q+E+M++ G S  IVE KFER+ +K Q+KTE+VKS +LKI  
Sbjct: 23  KKEKDEARRKEKKVPEEAQKETMQKEGTSSAIVETKFERLIKKTQQKTEKVKSGLLKINV 82

Query: 76  QTQGVKALVEEKLKAKMKGWKELRSKVEE 102
           +  GVKALV+EK + K++  +EL SKVE+
Sbjct: 83  KAHGVKALVQEKKETKLRKREELLSKVEK 111

[Close]

BLAST of IVF0001216 vs. ExPASy TrEMBL
Match: A0A5D3CVF0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00030 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.3e-06
Identity = 49/103 (47.57%), Postives = 66/103 (64.08%), Query Frame = 0


Query: 52  VAEKAQKKTEQVKSRVLKIKEQTQGVKALVEEKLKAKMKGWKELRSKVE----------- 111
           + +K Q+KT++VKSR+LK+K + QGVKALVEEK +AK KG +EL SKVE           
Sbjct: 4   LGKKTQEKTKKVKSRLLKLKVKAQGVKALVEEKEEAKKKGREELLSKVEKVVHSAKKDKG 63

Query: 112 ---------EEASKEIKELSSLKDDALKLRKKRRVKMKKKTLR 135
                    EE  KEI+ L  L+ +A + +KKR+V MKKKTL+
Sbjct: 64  KEKTQEEHCEEFEKEIENLCPLEKEAPRPKKKRKVTMKKKTLK 106

[Close]

BLAST of IVF0001216 vs. NCBI nr
Match: KAA0038037.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK20565.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 156 bits (394), Expect = 2.88e-46
Identity = 101/123 (82.11%), Postives = 101/123 (82.11%), Query Frame = 0


Query: 35  MREIGASLPIVEAKFERVAEKAQKKTEQVKSRVLKIKEQTQGVKALVEEKLKAKMKGWKE 94
           MREIGASLPIVEAKFERVAEKAQKKTEQVKSRVLKIKEQTQGVKALVEEKLKAKMKGWKE
Sbjct: 1   MREIGASLPIVEAKFERVAEKAQKKTEQVKSRVLKIKEQTQGVKALVEEKLKAKMKGWKE 60

Query: 95  LRSKVEE----------------------EASKEIKELSSLKDDALKLRKKRRVKMKKKT 135
           LRSKVEE                      EASKEIKELSSLKDDALKLRKKRRVKMKKKT
Sbjct: 61  LRSKVEEVAFSVEKSKEKGKEKTFEEFCEEASKEIKELSSLKDDALKLRKKRRVKMKKKT 120

[Close]

BLAST of IVF0001216 vs. NCBI nr
Match: TYJ97774.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 1.97e-13
Identity = 59/124 (47.58%), Postives = 78/124 (62.90%), Query Frame = 0


Query: 16  RKEKDLDEEDNCEE--EQEESMREIGASLPIVEAKFERVAEKAQKKTEQVKSRVLKIKEQ 75
           +K+K ++E+ + EE  EQEE + EI AS+PI + KF+RV+ KAQK+ E+VK+R+LKIK +
Sbjct: 96  KKKKKIEEKVHKEEQEEQEEEVCEISASMPIAKIKFDRVSRKAQKEKEKVKTRLLKIKVK 155

Query: 76  TQGVKALVEEKLKAKMKGWKELRSKVE--------------------EEASKEIKELSSL 117
            QGVKAL EEK + K+K  KEL +KV                     EE  KEI ELS L
Sbjct: 156 AQGVKALAEEKKEIKLKEQKELLNKVNKLALSVENSKEKEKTFEEYCEEFEKEISELSPL 215

[Close]

BLAST of IVF0001216 vs. NCBI nr
Match: KAA0048705.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 66.6 bits (161), Expect = 2.76e-10
Identity = 53/111 (47.75%), Postives = 71/111 (63.96%), Query Frame = 0


Query: 43  PIVEAKFERVAEKAQKKTEQVKSRVLKIKEQTQGVKALVEEKLKAKMKGWKELRSKVE-- 102
           PI + +FE +A+K Q+KT++VKSR+LK+K + Q VKALVEEK +AK KG +EL SKVE  
Sbjct: 59  PIAKIEFESLAKKTQEKTKKVKSRLLKLKVKAQRVKALVEEKEEAKTKGREELLSKVEKV 118

Query: 103 ------------------EEASKEIKELSSLKDDALKLRKKRRVKMKKKTL 133
                             EE  KEI+ L  L+ +A + +KKR+V MKKKTL
Sbjct: 119 VHSAKKDKGKEKTHEEHCEEFEKEIENLCPLEKEAPRPKKKRKVTMKKKTL 169

[Close]

BLAST of IVF0001216 vs. NCBI nr
Match: KAA0047856.1 (hypothetical protein E6C27_scaffold133G001210 [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 7.96e-09
Identity = 38/58 (65.52%), Postives = 49/58 (84.48%), Query Frame = 0


Query: 15 KRKEKD-LDEEDNCEEEQEESMREIGASLPIVEAKFERVAEKAQKKTEQVKSRVLKIK 71
          K KEK+ + EED+CE+EQE+S+RE   SLPIVE KFER+A+KA+KKT+QVKS + KIK
Sbjct: 36 KEKEKEKMVEEDDCEKEQEKSLRETEISLPIVETKFERMAKKAKKKTKQVKSSLFKIK 93

[Close]

BLAST of IVF0001216 vs. NCBI nr
Match: KAA0060687.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 1.68e-08
Identity = 40/73 (54.79%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 28  EEEQEESMREIGASLPIVEAKFERVAEKAQKKTEQVKSRVLKIKEQTQGVKALVEEKLKA 87
           EE Q+E+M++ G S  IVE KFER+ +K Q+KTE+VKS +LKI  +  GVKALV+EK + 
Sbjct: 38  EEAQKETMQKEGTSSAIVETKFERLIKKTQQKTEKVKSGLLKINVKAHGVKALVQEKKET 97

Query: 88  KMKGWKELRSKVE 100
           K++  +EL SKVE
Sbjct: 98  KLRKREELLSKVE 110

The following BLAST results are available for this feature:

BLAST of IVF0001216 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0001216 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T8V8	2.3e-35	82.11	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00...	[more]
A0A5D3BFC8	1.1e-10	47.20	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0...	[more]
A0A5A7U502	2.3e-08	47.32	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G0...	[more]
A0A5A7V1I3	9.9e-07	50.56	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005...	[more]
A0A5D3CVF0	1.3e-06	47.57	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00...	[more]

BLAST of IVF0001216 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038037.1	2.88e-46	82.11	protein MNN4-like [Cucumis melo var. makuwa] >TYK20565.1 protein MNN4-like [Cucu...	[more]
TYJ97774.1	1.97e-13	47.58	protein MNN4-like [Cucumis melo var. makuwa]	[more]
KAA0048705.1	2.76e-10	47.75	protein MNN4-like [Cucumis melo var. makuwa]	[more]
KAA0047856.1	7.96e-09	65.52	hypothetical protein E6C27_scaffold133G001210 [Cucumis melo var. makuwa]	[more]
KAA0060687.1	1.68e-08	54.79	protein MNN4-like [Cucumis melo var. makuwa]	[more]

BLAST of IVF0001216 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 82..116
None	No IPR available	COILS	Coil	Coil	coord: 53..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..36

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0001216.1	IVF0001216.1	mRNA