![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
IVF0001210 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATTGAAAAATAGAAACGAAAACAGAATGAAACAAAATGTTATGAAATTGGCCTAAAATTCCCAAATCTCACCGATCATGTCATGGGTGGACGTTTAAATCTTGAAGCGGTAGGGTTTAGGGCATGATTTTATCTCCAACCCGATCGTCTCCTTCCCTCCCTCCAAAATATTCGAAGCCCATCATTAGACTCATTTTCCTTCTCCCAAATTCCCATTAGGGTTAGGGTTCTCACTGCTTCAGTTTCCGAGTAAGACACGCTAATAACCCACTATGGCGAGGTACCGGAGCCGGAGCAGAAGTTACAGCCCTCGCCGGCGTAGTAGAACCCCACCACGCGGGCGGAAGAGGTATGACGATGACCCTCGAGACCGTTACCGCGAAAGCAGGTCTCATAGGGACCGTCGTTCTCCTGCTCCTTCTGGGTTACTCGTGCGTAATCTTCCGCTTGATGCTAGGTATTTCATGTTCTTCTTCGAGCTTTCTATGTTATTGATAATGTCTCGCGTTATTATTTTGATGGAGGAATTGAATGCCTCATTTGCTTTCATGTTTTTGTACATACTAGTGCACTTTTGTTTAGAATCTGGAATTTTGGGCAGGCTGTAAAGGGGTTTACCGTATGAATTTTGATTAGTAGGCATGTGAAGAGTTGATCAAAAAGAGCATTTGTTGCAAGTAATTTACTGTCAAGCCGTGTGCTATCGTGCTACATTGCATTATTTTCTCATTTCCCGTAGTCTATCCATTCTATTTACGAAGAGGAACGATTGAGTGTTTGCATTGTATACCATGCAGGCCTGAAGATCTTAGGATCCCGTTTGAGCGATTTGGTCCTGTTAAGGACGTGTATCTGCCGAAGAACTACTACACTGGGTATGGCCGCTTTCATGTTAACATGTGCGCTCTTGGGTGTTGAAGAAATCACTTTATTATTTCCTGGTATTTTTTTCTCTTAATTATCGGGATATCCACACTAGATAACAGATTTTTGGCTATATTAGTTATGGAAGAAAACAGTTGAGAAAATCTTTGAGATTAAGTTGTGGGATCATAATTTCGGAGCACTGCTGAAGTTTTAACGATTAAATTTCCTTTACCATCATGTAATTATTTGGTTAAGATCGACAACAAGTCAATCTGAAAGAATGAAGGGTAAGTTTGCTGCATATAGAAGGAATCTGCAAATTTATCGGTTAACCTGAACTTTGTTTGTACTTAATCCTAGAAAGGATGAATTGACTGACAAGGAATTATTTGTAGGGGAATGATGTGTTTGTTAGTCTATAATAGCAGTGGTCAACAAGAAAGAAATTCTTGAAGCGTGTGTGAATTAGTTGAGTTGACAGTGGCTCTACATTAAATATGTGTCTAAAACTTAATACTGCCTGGCAACCCTTTCTGGTTATTACTTATTACAGAGATCTACTTTGCTTTCTCTCTCATTATGATATCTACTTAGCCTTCTCTCTCATTATGATATCATTCTCTTTATTGCCTATTTGTAGGGAGCCTCGAGGATTTGGATTTGTGAAGTTTCGGTTTGCAGAAGATGCGGCTGAAGCAAAACAACAGCTAAATCATACAGTTATAGGTGGACGGGAGATACGAATCGTATTTGCTGAGGAGAACAGGAAAACTCCTCAAGAAATGCGTGTGACGTCACGCTCAAGGTTCAATGACCTTCCTCTTAACCTCTAATCTTGCAGTATCGTTTGGTTGAATATCTTCTCCATGAAACCAGTATCTTTAACTTTGATCTATTATATTGATAGTCTCTTGTTTCTCATATACAGTGGTAGAAGCTACAGAAGACGTTCTCCAGCAAGGTCTCCGAGACGGCGATATCGTTGTTAGTGTCAATACATTTATCTTTTTTCTTTCTTTCTTTTTTGCTGACTTTCATGAAAATAATTGCATTGGCTTGATGATCTTTGATGTTATCATCGTGATGCAATATTGTAATTACACCCTTAATTTTTATTCTCAAGAAGCCTTTTGTATTTGACTGCAGCTTACTCGCGCTCACCTTCACCTGCCAGGCACGACTCAAGGTTGGATCTTATTTATCATACTTGTTTTACTTCTAGCAAGACTAACATCATTATTGTCCTGCTTTTTTCCATCACTTCTTACTTCTGTACATTACTATGAATTTTGGTCGTTCCTGTCTTGATGTTTACTTGTTTAGTAAGCTGCACATGCCTTCTTTGAATTTTATAATTTAGTACTGTAACATGTCAAAGCATTCTTTTTGGATGAGAAGCATTGTATAATATTTTTGAAATTTTGTACTTGTCTTATATAGAATACCCAAACGCCAAACCCCCAAAATGGAAGTGCTTATTCCTTGTTTTAATTTTCAGTGGAACCAAAATGATTTTGTGTGTAAATTTAATGTACAATTAAGTTTATTTTGGGTGAAAATCATTTTTGTAGAAATATTTCGATATATTCAATGTAATTCTATTTTCGACCAGAACCTCAAGGCTTCGGTTTTGTCAAGAGCCTCTTAAATTTATCAATGGTGTTTCAATTTTAAGTACAAAATCCATTTCTAATGGATGAGCCATTTTTGCTCCTTTGTCATGTTGTGAAGTTCATAGTCAATATAAATAGTACTCTGCTGTGGTTTCTGAAATGGTAATAATCACTTTCGTCATTTTTATAATGACTCGAGAAATGCTTCTAATCATTTAAAATCAATTTTGTAGTCTGAAAAATGCATTTAAGAGAGAAAATTAAAAATTGAATTGATCTTGAGTGACTAAAGGTGTGTTTCAAAGTGATTTTAGTACATGACAAGGGATTTTAACAATTTCAAAATCACCCCCAAACATGCACTAAATAGTTTGACAACAATTGTGGCACTTCTAATCTTCATTTCCTCATTAGGTTTATAACATCAAATCTATATATTAATTCTAAGCAACAGTTTCAGTTTTTTGTTGTTTTACAAGCTTTAGTTGTAGAATTTTTATTTCATATGCTTGAATGTTATCATGGATAAGCAAAAACACAGAATTTAATGTTTGATTTGATGCACGTGGAATATTCTACTCCCTTCATGGTACAGAGTTGCATTGCAGGACATTGTATACAATCTACTTGATTCCTTGTTTATGCAGATATTAAAGTGTAAAGGGAGACTTTAAAGACTTGTTGATTAATAAAGTTTAACAAGAAAAGCGATCATAAAGTGATGGGCAACTTGCTTACTTTACCTATCGAACCCTCTCCATGAGTACAATCTATTACTTTTTTTAATTACGTTAGTTGCATGGTTTTTATTGTTTGTTTACATCTGTTTTGTTAGGCAGAAGTTGAGCATTGACGAGAGTTTTAAATCAAAATTTATCTCTGGTTCTTTTTTCCCCATTTTTCCTCCCTTACAAATCTCAACCATTTATCAGCAAGAAAGTGATCTTTAAGTTTGATATCTTCTTTTGCATATACTATCCAGTTAAGAAAGATTAGAGCTTATAGTTGGCCAAAGAAAGAAATCATCTTCAAAGGAGAAAAGGCCAAAGTTTTACTGGTTGTCGTATGGTGACATTGTCCAAGAAAAGATAATGTGTTTTTTAGAAAGTTGGGGCAAAGAGAGCTATGAACTTGTCAGAAGCTGATCAACCAGTACAGCTTAATAGAGCATAATTCTCAGTGTTTGGATCTACTTGTCATTATTTTGTTCGGAAACCTGAAAATGGTGCAGGTAAAAGTCATGTTTTAGTTGAACAGTTTTGAAAATGATGTTGATAGAAAATTGTGCTTATAAAAGTATGATCAAGTATCATAAGTACCTATTGAACGTACCTCATTGGGGCCTTTGAAGACTGCTTGGACAGGTTTTCTTTCCTGTTAGAGAGAGAGTTGGTTTTCTGTGTTTCAATTCTGAATGAAAACCGTTTCTGTTTGATATGTTGATTTTCATTATTTTTTTTCTGTTGTTGTGGATGATACAGGAGCCGTGGGGCAAGGGATGAGTATCTATCTCCTGCACGATCGAGATCAATTTCACATTCTCGTTCCCCTCGTGATAGGCAGGATTACAGCCGATCTCCTACTCCAAAGGATAATGGTCGCAGCCCTCGTGAAGTGGATAATGCACGGAGTAGGTCAAGGAGTCCAAAGGGTGATAGCCGTAGTCCTTCTGGATCTCGTTCACGGTCGTATAGGTATTTTACCTTATGCTCCTTTACATCTTAAGTTTCCTTTTTTTATCTCTGCATTTCTGAATAAGAGGATCTACACAGGGAACCGCGTATCACACGTGTTGGTACTGGTAGTTTCAGAATTCATGGTGATTCATTAAACTATATAAATAAGTGTTATATTATCGTTTCATTTTACCTTGGTGAGAGAGACCTATGGTAGGATAGACGTCTGATATGGAGGGCTAAGTTAATCTCCTAGAATATATAGATTGTTTACGATGGAGGATGAACAGAGCTTTATTTAATAAGCTCTCATGATTCGTGTTATTCTCACAGGTGTTTGTTGAATTTAATTGGTTAGAAGAGGCGAGAAAGAAATGACACATTTGGATGATTTGGTTTTTTGCTCCTTTGTTCAAGAATTTCTTTGGTTATCTGTTGATCTTGTAGAATTTAGTAAAACCCTTTGGAGAAATTTTAATTTATTTGCTAATGTTCACACTTAAATACAATATAAACTGGGGATGAGATTTGAGATCCCCTTGGTTAAGGGGGCAGCAAAGTACTCGACTGTTTTGTCATTATTGAACATTTCACATGGTCCAAAGTGTGTTGTGTTTAGGCAGTAATGCTTTCCTCTGGTTAATTGAAGAATTTAAAATTTTAACTAACACCCTGTAATGTTTACTTCTGCAGTCCTCGCTGATAGAGTTTTGGAATTGTGCGGTGATTCTGCTGCAGTCAGTCCTTGAGAATTGTTAAGTCTGCCTTCAGTTGTGGCCAGATGAACTATGCTATTCCATGCTTTGCAGTTTCTGTAAGGAATTTTATTTACATATGAAAGTAGGGAGGCGAGACTTGAGATATGGATTGAAGAACAATGAATGTTGACTTCATATGAATGCATGCTGATACACTTCTACTTGACCTTTACTAGATTTAGGATTTTGGCTTAAATTTCGTTTTTGTACTCTTGTATATACTCTGGTTGTATTTTTCAACTTAGTGGTCTTGTTCGTTTATCAGTTTTATTTTGTTATTTAGTAACCCCTTTTTTC ATGTATTGAAAAATAGAAACGAAAACAGAATGAAACAAAATGTTATGAAATTGGCCTAAAATTCCCAAATCTCACCGATCATGTCATGGGTGGACGTTTAAATCTTGAAGCGGTAGGGTTTAGGGCATGATTTTATCTCCAACCCGATCGTCTCCTTCCCTCCCTCCAAAATATTCGAAGCCCATCATTAGACTCATTTTCCTTCTCCCAAATTCCCATTAGGGTTAGGGTTCTCACTGCTTCAGTTTCCGAGTAAGACACGCTAATAACCCACTATGGCGAGGTACCGGAGCCGGAGCAGAAGTTACAGCCCTCGCCGGCGTAGTAGAACCCCACCACGCGGGCGGAAGAGGTATGACGATGACCCTCGAGACCGTTACCGCGAAAGCAGGTCTCATAGGGACCGTCGTTCTCCTGCTCCTTCTGGGTTACTCGTGCGTAATCTTCCGCTTGATGCTAGGCCTGAAGATCTTAGGATCCCGTTTGAGCGATTTGGTCCTGTTAAGGACGTGTATCTGCCGAAGAACTACTACACTGGGGAGCCTCGAGGATTTGGATTTGTGAAGTTTCGGTTTGCAGAAGATGCGGCTGAAGCAAAACAACAGCTAAATCATACAGTTATAGGTGGACGGGAGATACGAATCGTATTTGCTGAGGAGAACAGGAAAACTCCTCAAGAAATGCGTGTGACGTCACGCTCAAGTGGTAGAAGCTACAGAAGACGTTCTCCAGCAAGGTCTCCGAGACGGCGATATCGTTCTTACTCGCGCTCACCTTCACCTGCCAGGCACGACTCAAGGAGCCGTGGGGCAAGGGATGAGTATCTATCTCCTGCACGATCGAGATCAATTTCACATTCTCGTTCCCCTCGTGATAGGCAGGATTACAGCCGATCTCCTACTCCAAAGGATAATGGTCGCAGCCCTCGTGAAGTGGATAATGCACGGAGTAGGTCAAGGAGTCCAAAGGGTGATAGCCGTAGTCCTTCTGGATCTCGTTCACGGTCGTATAGTCCTCGCTGATAGAGTTTTGGAATTGTGCGGTGATTCTGCTGCAGTCAGTCCTTGAGAATTGTTAAGTCTGCCTTCAGTTGTGGCCAGATGAACTATGCTATTCCATGCTTTGCAGTTTCTGTAAGGAATTTTATTTACATATGAAAGTAGGGAGGCGAGACTTGAGATATGGATTGAAGAACAATGAATGTTGACTTCATATGAATGCATGCTGATACACTTCTACTTGACCTTTACTAGATTTAGGATTTTGGCTTAAATTTCGTTTTTGTACTCTTGTATATACTCTGGTTGTATTTTTCAACTTAGTGGTCTTGTTCGTTTATCAGTTTTATTTTGTTATTTAGTAACCCCTTTTTTC ATGGCGAGGTACCGGAGCCGGAGCAGAAGTTACAGCCCTCGCCGGCGTAGTAGAACCCCACCACGCGGGCGGAAGAGGTATGACGATGACCCTCGAGACCGTTACCGCGAAAGCAGGTCTCATAGGGACCGTCGTTCTCCTGCTCCTTCTGGGTTACTCGTGCGTAATCTTCCGCTTGATGCTAGGCCTGAAGATCTTAGGATCCCGTTTGAGCGATTTGGTCCTGTTAAGGACGTGTATCTGCCGAAGAACTACTACACTGGGGAGCCTCGAGGATTTGGATTTGTGAAGTTTCGGTTTGCAGAAGATGCGGCTGAAGCAAAACAACAGCTAAATCATACAGTTATAGGTGGACGGGAGATACGAATCGTATTTGCTGAGGAGAACAGGAAAACTCCTCAAGAAATGCGTGTGACGTCACGCTCAAGTGGTAGAAGCTACAGAAGACGTTCTCCAGCAAGGTCTCCGAGACGGCGATATCGTTCTTACTCGCGCTCACCTTCACCTGCCAGGCACGACTCAAGGAGCCGTGGGGCAAGGGATGAGTATCTATCTCCTGCACGATCGAGATCAATTTCACATTCTCGTTCCCCTCGTGATAGGCAGGATTACAGCCGATCTCCTACTCCAAAGGATAATGGTCGCAGCCCTCGTGAAGTGGATAATGCACGGAGTAGGTCAAGGAGTCCAAAGGGTGATAGCCGTAGTCCTTCTGGATCTCGTTCACGGTCGTATAGTCCTCGCTGA MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRSSGRSYRRRSPARSPRRRYRSYSRSPSPARHDSRSRGARDEYLSPARSRSISHSRSPRDRQDYSRSPTPKDNGRSPREVDNARSRSRSPKGDSRSPSGSRSRSYSPR Homology
BLAST of IVF0001210 vs. ExPASy Swiss-Prot
Match: Q1PDV2 (Serine/arginine-rich SC35-like splicing factor SCL28 OS=Arabidopsis thaliana OX=3702 GN=SCL28 PE=1 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 9.4e-61 Identity = 159/250 (63.60%), Postives = 181/250 (72.40%), Query Frame = 0
BLAST of IVF0001210 vs. ExPASy Swiss-Prot
Match: Q9LHP2 (Serine/arginine-rich SC35-like splicing factor SCL30A OS=Arabidopsis thaliana OX=3702 GN=SCL30A PE=1 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 3.3e-37 Identity = 120/248 (48.39%), Postives = 147/248 (59.27%), Query Frame = 0
BLAST of IVF0001210 vs. ExPASy Swiss-Prot
Match: Q9SEU4 (Serine/arginine-rich SC35-like splicing factor SCL33 OS=Arabidopsis thaliana OX=3702 GN=SCL33 PE=1 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.2e-36 Identity = 126/258 (48.84%), Postives = 149/258 (57.75%), Query Frame = 0
BLAST of IVF0001210 vs. ExPASy Swiss-Prot
Match: Q8L3X8 (Serine/arginine-rich SC35-like splicing factor SCL30 OS=Arabidopsis thaliana OX=3702 GN=SCL30 PE=1 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.6e-31 Identity = 118/259 (45.56%), Postives = 142/259 (54.83%), Query Frame = 0
BLAST of IVF0001210 vs. ExPASy Swiss-Prot
Match: P30352 (Serine/arginine-rich splicing factor 2 OS=Gallus gallus OX=9031 GN=SRSF2 PE=2 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.2e-20 Identity = 85/206 (41.26%), Postives = 112/206 (54.37%), Query Frame = 0
BLAST of IVF0001210 vs. ExPASy TrEMBL
Match: A0A1S3AXW0 (serine/arginine-rich SC35-like splicing factor SCL28 OS=Cucumis melo OX=3656 GN=LOC103483786 PE=3 SV=1) HSP 1 Score: 463.0 bits (1190), Expect = 7.9e-127 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of IVF0001210 vs. ExPASy TrEMBL
Match: A0A5D3CXM8 (Serine/arginine-rich SC35-like splicing factor SCL28 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00340 PE=3 SV=1) HSP 1 Score: 458.0 bits (1177), Expect = 2.5e-125 Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
BLAST of IVF0001210 vs. ExPASy TrEMBL
Match: A0A6J1IQ05 (serine/arginine-rich SC35-like splicing factor SCL28 OS=Cucurbita maxima OX=3661 GN=LOC111479462 PE=3 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 4.6e-119 Identity = 237/248 (95.56%), Postives = 240/248 (96.77%), Query Frame = 0
BLAST of IVF0001210 vs. ExPASy TrEMBL
Match: A0A6J1GW11 (serine/arginine-rich SC35-like splicing factor SCL28 OS=Cucurbita moschata OX=3662 GN=LOC111457670 PE=4 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 4.6e-119 Identity = 236/248 (95.16%), Postives = 240/248 (96.77%), Query Frame = 0
BLAST of IVF0001210 vs. ExPASy TrEMBL
Match: A0A6J1C7W4 (serine/arginine-rich SC35-like splicing factor SCL28 OS=Momordica charantia OX=3673 GN=LOC111009197 PE=3 SV=1) HSP 1 Score: 430.3 bits (1105), Expect = 5.6e-117 Identity = 232/248 (93.55%), Postives = 240/248 (96.77%), Query Frame = 0
BLAST of IVF0001210 vs. NCBI nr
Match: XP_008438778.1 (PREDICTED: serine/arginine-rich SC35-like splicing factor SCL28 [Cucumis melo]) HSP 1 Score: 456 bits (1173), Expect = 4.01e-161 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of IVF0001210 vs. NCBI nr
Match: XP_004134179.1 (serine/arginine-rich SC35-like splicing factor SCL28 [Cucumis sativus]) HSP 1 Score: 451 bits (1160), Expect = 3.84e-159 Identity = 246/248 (99.19%), Postives = 247/248 (99.60%), Query Frame = 0
BLAST of IVF0001210 vs. NCBI nr
Match: KAA0049431.1 (serine/arginine-rich SC35-like splicing factor SCL28 [Cucumis melo var. makuwa] >TYK16110.1 serine/arginine-rich SC35-like splicing factor SCL28 [Cucumis melo var. makuwa]) HSP 1 Score: 451 bits (1160), Expect = 1.18e-158 Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
BLAST of IVF0001210 vs. NCBI nr
Match: XP_038878233.1 (serine/arginine-rich SC35-like splicing factor SCL28 [Benincasa hispida]) HSP 1 Score: 441 bits (1135), Expect = 2.57e-155 Identity = 240/248 (96.77%), Postives = 245/248 (98.79%), Query Frame = 0
BLAST of IVF0001210 vs. NCBI nr
Match: XP_022979912.1 (serine/arginine-rich SC35-like splicing factor SCL28 [Cucurbita maxima]) HSP 1 Score: 430 bits (1106), Expect = 6.52e-151 Identity = 237/248 (95.56%), Postives = 240/248 (96.77%), Query Frame = 0
BLAST of IVF0001210 vs. TAIR 10
Match: AT5G18810.1 (SC35-like splicing factor 28 ) HSP 1 Score: 235.0 bits (598), Expect = 6.7e-62 Identity = 159/250 (63.60%), Postives = 181/250 (72.40%), Query Frame = 0
BLAST of IVF0001210 vs. TAIR 10
Match: AT3G13570.1 (SC35-like splicing factor 30A ) HSP 1 Score: 156.8 bits (395), Expect = 2.3e-38 Identity = 120/248 (48.39%), Postives = 147/248 (59.27%), Query Frame = 0
BLAST of IVF0001210 vs. TAIR 10
Match: AT1G55310.1 (SC35-like splicing factor 33 ) HSP 1 Score: 154.8 bits (390), Expect = 8.8e-38 Identity = 126/258 (48.84%), Postives = 149/258 (57.75%), Query Frame = 0
BLAST of IVF0001210 vs. TAIR 10
Match: AT1G55310.2 (SC35-like splicing factor 33 ) HSP 1 Score: 146.7 bits (369), Expect = 2.4e-35 Identity = 115/245 (46.94%), Postives = 141/245 (57.55%), Query Frame = 0
BLAST of IVF0001210 vs. TAIR 10
Match: AT1G55310.3 (SC35-like splicing factor 33 ) HSP 1 Score: 143.7 bits (361), Expect = 2.0e-34 Identity = 124/269 (46.10%), Postives = 147/269 (54.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|