IVF0000915 (gene) Melon (IVF77) v1

Overview


Name	IVF0000915
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	charged multivesicular body protein 5-like
Location	chr12: 5654447 .. 5655348 (+)
RNA-Seq Expression	IVF0000915
Synteny	IVF0000915

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGCCTTGAAATCTGCCAATAAGGAGTTGAAAGGAATGATGAAAACAGTCAGTATACAAGACATAGATGTCAGTAACAATCAATTCTTTTTAGCATCCCTAGTTTTATTTTGGCATTTGTTGAGAGATTTGTGTTGCCTATAGAACTTACAAGATGAGATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTACAATGTACCTGATGACATTGATGAGGATGAACTTTTGGGTGGTAAGATTACTGCATTTTAGCTCAGTGTCGATGAAATATATGGTACCTTAGTAATCTTACATTGTGCCTACGTTTTGGATTATAGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCTGACAAGGAATCTAATTTTGAAGGAGAGCTCAACTTGCCTGCCGCTCCGATAGGGCATGCAGCAGTTCCTGCTGGTAGAAACAATGCACAGGTAATGATCGTTGAAAAACAGGATCCAATTTCTGAGTCAATAATCATGAACTTATTCGTTTTAGAAACGATTGTGAAATGAATATTACTTAGATTTACAGGATGCATGCTAATGCCAACACCCTTTTTTTTCTCTTTCTTGAGAAAATTACTGTATAGTTCAACATGAATTATGCATATGCATCTATTAACATGAAGTTACACATCTGTCGTCTGTTCAAGAGAATGTCAGAATTCGTCGGTTCTAAATTACACAGTGTTATTGATATGGTTTAATTTTACCTTCACACCTTCGGCACTTTTACATGCATTGATTCTTTTTTTCCGCTTAATTTGATGGGCAGGCCGAGGATGAATTAGGTTTACCCGCTGTTCCTCGCGCATCCCTTCGAGGCTAA

mRNA sequence

ATGTCGGCCTTGAAATCTGCCAATAAGGAGTTGAAAGGAATGATGAAAACAGTCAGTATACAAGACATAGATAACTTACAAGATGAGATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTACAATGTACCTGATGACATTGATGAGGATGAACTTTTGGGTGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCTGACAAGGAATCTAATTTTGAAGGAGAGCTCAACTTGCCTGCCGCTCCGATAGGGCATGCAGCAGTTCCTGCTGGTAGAAACAATGCACAGGCCGAGGATGAATTAGGTTTACCCGCTGTTCCTCGCGCATCCCTTCGAGGCTAA

Coding sequence (CDS)

ATGTCGGCCTTGAAATCTGCCAATAAGGAGTTGAAAGGAATGATGAAAACAGTCAGTATACAAGACATAGATAACTTACAAGATGAGATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTACAATGTACCTGATGACATTGATGAGGATGAACTTTTGGGTGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCTGACAAGGAATCTAATTTTGAAGGAGAGCTCAACTTGCCTGCCGCTCCGATAGGGCATGCAGCAGTTCCTGCTGGTAGAAACAATGCACAGGCCGAGGATGAATTAGGTTTACCCGCTGTTCCTCGCGCATCCCTTCGAGGCTAA

Protein sequence

MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDELGLPAVPRASLRG

Homology

[Close]

BLAST of IVF0000915 vs. ExPASy Swiss-Prot
Match: Q9FMC5 (Vacuolar protein sorting-associated protein 60.2 OS=Arabidopsis thaliana OX=3702 GN=VPS60-2 PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.3e-53
Identity = 111/132 (84.09%), Postives = 118/132 (89.39%), Query Frame = 0


Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           M+ALKSANKELKGMMKTV IQDIDNLQD+MMDLMD S+EIQETLGRSYNVPDDIDED+LL
Sbjct: 106 MTALKSANKELKGMMKTVKIQDIDNLQDDMMDLMDESSEIQETLGRSYNVPDDIDEDDLL 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMG ETEADGVPSYLQPDKE +   ELNLP+AP+GH   P GR  AQAEDE 
Sbjct: 166 GELDALEADMGNETEADGVPSYLQPDKEPDLNDELNLPSAPMGHTGAPPGR--AQAEDEW 225

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 235

[Close]

BLAST of IVF0000915 vs. ExPASy Swiss-Prot
Match: Q9LPN5 (Vacuolar protein sorting-associated protein 60.1 OS=Arabidopsis thaliana OX=3702 GN=VPS60-1 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.1e-52
Identity = 107/132 (81.06%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           M+ALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVS+EIQE+LGRSYN+PD +DED+L+
Sbjct: 106 MTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSSEIQESLGRSYNIPDGLDEDDLM 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMG ETEADG+PSYLQPD E++++ ELNLPAAP GH   P GR  AQAEDE 
Sbjct: 166 GELDALEADMGNETEADGMPSYLQPDTETDYDSELNLPAAPTGHNGAPHGR--AQAEDEF 225

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 235

[Close]

BLAST of IVF0000915 vs. ExPASy Swiss-Prot
Match: Q54JK4 (Charged multivesicular body protein 5 OS=Dictyostelium discoideum OX=44689 GN=chmp5 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 6.6e-13
Identity = 41/84 (48.81%), Postives = 58/84 (69.05%), Query Frame = 0


Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           +SA+K   K++K  +K + I+D+D++QDEM DL+D +NEIQE+LGR+Y  PD +DE EL 
Sbjct: 105 VSAMKQGAKDMKTQLKHIKIEDVDDMQDEMQDLLDYNNEIQESLGRAYQTPDTLDESELE 164

Query: 61  GELDALEADMGFETEAD-GVPSYL 84
            EL      MG E E +  +PSYL
Sbjct: 165 AEL----MSMGEELELEASMPSYL 184

[Close]

BLAST of IVF0000915 vs. ExPASy Swiss-Prot
Match: Q9D7S9 (Charged multivesicular body protein 5 OS=Mus musculus OX=10090 GN=Chmp5 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.6e-12
Identity = 54/128 (42.19%), Postives = 70/128 (54.69%), Query Frame = 0


Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           + A+K   KE+K   K V I  I++LQD++ D+M+ +NEIQE LGRSY  P ++DED+L 
Sbjct: 106 VDAMKLGVKEMKKAYKEVKIDQIEDLQDQLEDMMEDANEIQEALGRSYGTP-ELDEDDLE 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQA--ED 120
            ELDAL    G E  AD   SYL        +   + PA P G   VP    N      D
Sbjct: 166 AELDAL----GDELLADEDSSYL--------DEAASAPAIPEG---VPTDTKNKDGVLVD 217

Query: 121 ELGLPAVP 127
           E GLP +P
Sbjct: 226 EFGLPQIP 217

[Close]

BLAST of IVF0000915 vs. ExPASy Swiss-Prot
Match: Q4QQV8 (Charged multivesicular body protein 5 OS=Rattus norvegicus OX=10116 GN=Chmp5 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.6e-12
Identity = 54/128 (42.19%), Postives = 70/128 (54.69%), Query Frame = 0


Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           + A+K   KE+K   K V I  I++LQD++ D+M+ +NEIQE LGRSY  P ++DED+L 
Sbjct: 106 VDAMKLGVKEMKKAYKEVKIDQIEDLQDQLEDMMEDANEIQEALGRSYGTP-ELDEDDLE 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQA--ED 120
            ELDAL    G E  AD   SYL        +   + PA P G   VP    N      D
Sbjct: 166 AELDAL----GDELLADEDSSYL--------DEAASAPAIPEG---VPTDTKNKDGVLVD 217

Query: 121 ELGLPAVP 127
           E GLP +P
Sbjct: 226 EFGLPQIP 217

[Close]

BLAST of IVF0000915 vs. ExPASy TrEMBL
Match: A0A1S3CIH4 (charged multivesicular body protein 5-like OS=Cucumis melo OX=3656 GN=LOC103501350 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.7e-64
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL
Sbjct: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 121 GLPAVPRASLRG 132

[Close]

BLAST of IVF0000915 vs. ExPASy TrEMBL
Match: A0A5D3CBJ0 (Charged multivesicular body protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001830 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.5e-63
Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 106 MSALKSANKELKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMGFETEADGVPSYLQPDKES+FEGELNLPAAPIGHAAVPAGRNNAQAEDEL
Sbjct: 166 GELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 225

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 237

[Close]

BLAST of IVF0000915 vs. ExPASy TrEMBL
Match: A0A1S3BFT5 (charged multivesicular body protein 5 OS=Cucumis melo OX=3656 GN=LOC103489370 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.5e-63
Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 106 MSALKSANKELKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMGFETEADGVPSYLQPDKES+FEGELNLPAAPIGHAAVPAGRNNAQAEDEL
Sbjct: 166 GELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 225

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 237

[Close]

BLAST of IVF0000915 vs. ExPASy TrEMBL
Match: A0A0A0KWL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613490 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 9.5e-63
Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 106 MSALKSANKELKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMGFETEADGVPSYLQPDKES+FEGELNLPAAPIGHAAVPAGRNNAQAEDEL
Sbjct: 166 GELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 225

Query: 121 GLPAVPRASLRG 133
           GLPAVP ASLRG
Sbjct: 226 GLPAVPHASLRG 237

[Close]

BLAST of IVF0000915 vs. ExPASy TrEMBL
Match: A0A6J1JDD4 (vacuolar protein sorting-associated protein 60.2 OS=Cucurbita maxima OX=3661 GN=LOC111483361 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.5e-60
Identity = 125/132 (94.70%), Postives = 127/132 (96.21%), Query Frame = 0


Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 106 MSALKSANKELKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMGFETE DGVPSYLQPDKES+ EGELNLP+AP GHAAVPAGR NAQAEDEL
Sbjct: 166 GELDALEADMGFETETDGVPSYLQPDKESDLEGELNLPSAPTGHAAVPAGRTNAQAEDEL 225

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 237

[Close]

BLAST of IVF0000915 vs. NCBI nr
Match: XP_008463129.1 (PREDICTED: charged multivesicular body protein 5-like [Cucumis melo])

HSP 1 Score: 255 bits (651), Expect = 2.34e-85
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL
Sbjct: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120

Query: 121 GLPAVPRASLRG 132
           GLPAVPRASLRG
Sbjct: 121 GLPAVPRASLRG 132

[Close]

BLAST of IVF0000915 vs. NCBI nr
Match: XP_008446740.1 (PREDICTED: charged multivesicular body protein 5 [Cucumis melo] >TYK09191.1 charged multivesicular body protein 5 [Cucumis melo var. makuwa])

HSP 1 Score: 251 bits (641), Expect = 2.65e-82
Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 106 MSALKSANKELKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMGFETEADGVPSYLQPDKES+FEGELNLPAAPIGHAAVPAGRNNAQAEDEL
Sbjct: 166 GELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 225

Query: 121 GLPAVPRASLRG 132
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 237

[Close]

BLAST of IVF0000915 vs. NCBI nr
Match: XP_004135046.1 (vacuolar protein sorting-associated protein 60.1 [Cucumis sativus] >XP_031741404.1 vacuolar protein sorting-associated protein 60.1 [Cucumis sativus])

HSP 1 Score: 249 bits (636), Expect = 1.53e-81
Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 106 MSALKSANKELKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMGFETEADGVPSYLQPDKES+FEGELNLPAAPIGHAAVPAGRNNAQAEDEL
Sbjct: 166 GELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 225

Query: 121 GLPAVPRASLRG 132
           GLPAVP ASLRG
Sbjct: 226 GLPAVPHASLRG 237

[Close]

BLAST of IVF0000915 vs. NCBI nr
Match: XP_038891460.1 (vacuolar protein sorting-associated protein 60.1 [Benincasa hispida])

HSP 1 Score: 247 bits (630), Expect = 1.25e-80
Identity = 128/132 (96.97%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 106 MSALKSANKELKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMGFETEADGVPSYLQPDKES+FEGELNLPAAP GHAAVPAGR NAQAEDEL
Sbjct: 166 GELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPTGHAAVPAGRTNAQAEDEL 225

Query: 121 GLPAVPRASLRG 132
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 237

[Close]

BLAST of IVF0000915 vs. NCBI nr
Match: XP_022957074.1 (vacuolar protein sorting-associated protein 60.2 [Cucurbita moschata] >XP_022985353.1 vacuolar protein sorting-associated protein 60.2 [Cucurbita maxima] >XP_023529845.1 vacuolar protein sorting-associated protein 60.2 [Cucurbita pepo subsp. pepo] >KAG6601234.1 Vacuolar protein sorting-associated protein 60.1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032026.1 Charged multivesicular body protein 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 242 bits (617), Expect = 1.19e-78
Identity = 125/132 (94.70%), Postives = 127/132 (96.21%), Query Frame = 0


Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 106 MSALKSANKELKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMGFETE DGVPSYLQPDKES+ EGELNLP+AP GHAAVPAGR NAQAEDEL
Sbjct: 166 GELDALEADMGFETETDGVPSYLQPDKESDLEGELNLPSAPTGHAAVPAGRTNAQAEDEL 225

Query: 121 GLPAVPRASLRG 132
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 237

[Close]

BLAST of IVF0000915 vs. TAIR 10
Match: AT5G04850.1 (SNF7 family protein )

HSP 1 Score: 210.3 bits (534), Expect = 9.4e-55
Identity = 111/132 (84.09%), Postives = 118/132 (89.39%), Query Frame = 0


Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           M+ALKSANKELKGMMKTV IQDIDNLQD+MMDLMD S+EIQETLGRSYNVPDDIDED+LL
Sbjct: 106 MTALKSANKELKGMMKTVKIQDIDNLQDDMMDLMDESSEIQETLGRSYNVPDDIDEDDLL 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMG ETEADGVPSYLQPDKE +   ELNLP+AP+GH   P GR  AQAEDE 
Sbjct: 166 GELDALEADMGNETEADGVPSYLQPDKEPDLNDELNLPSAPMGHTGAPPGR--AQAEDEW 225

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 235

[Close]

BLAST of IVF0000915 vs. TAIR 10
Match: AT3G10640.1 (SNF7 family protein )

HSP 1 Score: 207.2 bits (526), Expect = 8.0e-54
Identity = 107/132 (81.06%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           M+ALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVS+EIQE+LGRSYN+PD +DED+L+
Sbjct: 106 MTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSSEIQESLGRSYNIPDGLDEDDLM 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMG ETEADG+PSYLQPD E++++ ELNLPAAP GH   P GR  AQAEDE 
Sbjct: 166 GELDALEADMGNETEADGMPSYLQPDTETDYDSELNLPAAPTGHNGAPHGR--AQAEDEF 225

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 235

[Close]

BLAST of IVF0000915 vs. TAIR 10
Match: AT3G10640.2 (SNF7 family protein )

HSP 1 Score: 207.2 bits (526), Expect = 8.0e-54
Identity = 107/132 (81.06%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           M+ALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVS+EIQE+LGRSYN+PD +DED+L+
Sbjct: 41  MTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSSEIQESLGRSYNIPDGLDEDDLM 100

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMG ETEADG+PSYLQPD E++++ ELNLPAAP GH   P GR  AQAEDE 
Sbjct: 101 GELDALEADMGNETEADGMPSYLQPDTETDYDSELNLPAAPTGHNGAPHGR--AQAEDEF 160

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 161 GLPAVPRASLRG 170

[Close]

BLAST of IVF0000915 vs. TAIR 10
Match: AT5G04850.2 (SNF7 family protein )

HSP 1 Score: 191.8 bits (486), Expect = 3.5e-49
Identity = 111/169 (65.68%), Postives = 118/169 (69.82%), Query Frame = 0


Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           M+ALKSANKELKGMMKTV IQDIDNLQD+MMDLMD S+EIQETLGRSYNVPDDIDED+LL
Sbjct: 106 MTALKSANKELKGMMKTVKIQDIDNLQDDMMDLMDESSEIQETLGRSYNVPDDIDEDDLL 165

Query: 61  G-------------------------------------ELDALEADMGFETEADGVPSYL 120
           G                                     ELDALEADMG ETEADGVPSYL
Sbjct: 166 GGKFFLCSLCCLSLGLVETISLCLLNSAPYTLYRFVNSELDALEADMGNETEADGVPSYL 225

Query: 121 QPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDELGLPAVPRASLRG 133
           QPDKE +   ELNLP+AP+GH   P GR  AQAEDE GLPAVPRASLRG
Sbjct: 226 QPDKEPDLNDELNLPSAPMGHTGAPPGR--AQAEDEWGLPAVPRASLRG 272

[Close]

BLAST of IVF0000915 vs. TAIR 10
Match: AT2G19830.1 (SNF7 family protein )

HSP 1 Score: 42.4 bits (98), Expect = 3.4e-04
Identity = 41/120 (34.17%), Postives = 55/120 (45.83%), Query Frame = 0


Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           + AL++    +K M K  +I D+D   DE+ +  +   +IQE L   +   +D DEDEL 
Sbjct: 101 VDALRTGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSAPFGA-NDFDEDELE 160

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
            ELD LE   G E E       LQP      +G  N P      A  PA +     EDEL
Sbjct: 161 AELDELE---GAELE----EQLLQPVPIHVPQG--NKP------ARAPAQKQPTAEEDEL 204

The following BLAST results are available for this feature:

BLAST of IVF0000915 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMC5	1.3e-53	84.09	Vacuolar protein sorting-associated protein 60.2 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LPN5	1.1e-52	81.06	Vacuolar protein sorting-associated protein 60.1 OS=Arabidopsis thaliana OX=3702...	[more]
Q54JK4	6.6e-13	48.81	Charged multivesicular body protein 5 OS=Dictyostelium discoideum OX=44689 GN=ch...	[more]
Q9D7S9	5.6e-12	42.19	Charged multivesicular body protein 5 OS=Mus musculus OX=10090 GN=Chmp5 PE=1 SV=...	[more]
Q4QQV8	5.6e-12	42.19	Charged multivesicular body protein 5 OS=Rattus norvegicus OX=10116 GN=Chmp5 PE=...	[more]

BLAST of IVF0000915 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CIH4	1.7e-64	100.00	charged multivesicular body protein 5-like OS=Cucumis melo OX=3656 GN=LOC1035013...	[more]
A0A5D3CBJ0	2.5e-63	98.48	Charged multivesicular body protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BFT5	2.5e-63	98.48	charged multivesicular body protein 5 OS=Cucumis melo OX=3656 GN=LOC103489370 PE...	[more]
A0A0A0KWL4	9.5e-63	97.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613490 PE=4 SV=1	[more]
A0A6J1JDD4	1.5e-60	94.70	vacuolar protein sorting-associated protein 60.2 OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of IVF0000915 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463129.1	2.34e-85	100.00	PREDICTED: charged multivesicular body protein 5-like [Cucumis melo]	[more]
XP_008446740.1	2.65e-82	98.48	PREDICTED: charged multivesicular body protein 5 [Cucumis melo] >TYK09191.1 char...	[more]
XP_004135046.1	1.53e-81	97.73	vacuolar protein sorting-associated protein 60.1 [Cucumis sativus] >XP_031741404...	[more]
XP_038891460.1	1.25e-80	96.97	vacuolar protein sorting-associated protein 60.1 [Benincasa hispida]	[more]
XP_022957074.1	1.19e-78	94.70	vacuolar protein sorting-associated protein 60.2 [Cucurbita moschata] >XP_022985...	[more]

BLAST of IVF0000915 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04850.1	9.4e-55	84.09	SNF7 family protein	[more]
AT3G10640.1	8.0e-54	81.06	SNF7 family protein	[more]
AT3G10640.2	8.0e-54	81.06	SNF7 family protein	[more]
AT5G04850.2	3.5e-49	65.68	SNF7 family protein	[more]
AT2G19830.1	3.4e-04	34.17	SNF7 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 23..43
None	No IPR available	GENE3D	6.10.250.1710		coord: 18..71 e-value: 1.3E-22 score: 81.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..132
None	No IPR available	PANTHER	PTHR22761	CHARGED MULTIVESICULAR BODY PROTEIN	coord: 1..127
None	No IPR available	PANTHER	PTHR22761:SF66	CHARGED MULTIVESICULAR BODY PROTEIN 5-LIKE	coord: 1..127
IPR005024	Snf7 family	PFAM	PF03357	Snf7	coord: 1..102 e-value: 1.0E-25 score: 90.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0000915.2	IVF0000915.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032511	late endosome to vacuole transport via multivesicular body sorting pathway
biological_process	GO:0006415	translational termination
biological_process	GO:0006900	vesicle budding from membrane
biological_process	GO:0007034	vacuolar transport
cellular_component	GO:0005771	multivesicular body