IVF0000780 (gene) Melon (IVF77) v1

Overview


Name	IVF0000780
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	F-box protein SKIP1
Location	chr05: 22168177 .. 22170299 (-)
RNA-Seq Expression	IVF0000780
Synteny	IVF0000780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGGTCGGGAGAGACAACACTATATCTCATTTCTCACGCCAAATGATCGGATTGCGGTTTTTCTTATACACTACGCGCATCCCAACAAAACTCAAAAGGAAAAGAAAAATAAAAAGAAAAACCTTTATTTCCTTTCTTCATTCCTAAATTCATTTCTAAGGACACCCAAAAATGGCAGAGCCGTCGTCGGAGTCATCATCATGGGCGGAGCTGACTCACGAGTGTCTAACCAACATCCTCTCTCGTCTAACCATCGAGCAGCGGTGGCGCGGCCCTATGCTCGTTTGCAAACATTGGTTCCGCGCCGCTAGGGACCCTTCTCTCTTTTCTCACTTCGATCTCGAACCCAGGTTCGAGTCTGCCCCCACCGAGTCTCCGGCCTGGTGGTTGCCGGAGTTCGAGACCAAGATTGATTCCATGCTCCGATCTGCCGTCCGTTGGAGCCTTGGATCTCTTTCAGTTATTCGGGTTAGACACTGCTCCGATTCTTCTCTCGATTTCGTCGCTCAAGGGTAATTAAATTAACTCTTCTTCTTTTAATTCTAATTTTGATTTAATTGTTGGGGCAAAAATGGAGCTTTATTGTTTGCTTATTAGAGTAAAAGATTTCATTTTTTTCTTCTCATATTTTCTATTCAGCAAGCGTCTTGATTGTGAGTTTTTTATTTTATTAAGTTAAGCATTATCGCTTGATATTTGCATCTGTTTTCATTTTTCAACAATCAATGTGCAGTTTTTTAGAATTAAAATTGTTGGGTTCCTCATTCAAGATGGCTTTTAGGAAGGTGGATGGGATGGGATGAATGTGGAAATTTTAATTGGTTAGGGATGTACCTTATGGAAAGGATTCCTTGTTTTGGAAACATCGTTTTTTTAATCTCATAAAGATTTCATGTAATTTGATGTTCTCATAAATAGTCTTCGTAGAACTAAGTGGATCTTTCTCTAACCATATGGACCAAATTTGAACTTTTTCCATATCATATGAATTGTATAATTGCAAAAAAGCAACAATATCTAAAGGTTTGTTTGGATTGATATTTTAAATGCTTAGGAGTTCCTTTCAAGAGAGGCAAAATAGTGTTAAACACTTAGAATGGTCAATACAGATAGTTCTGAGTCTAAATAGTTGATGAGCAATGAGTATGGGCTTTGCAACAAAAATGGTTGTAGAATCTAACATTGAGATTCGCTGAGATGAGTAAACTAGCATGGACACTAGGGATTATCAAAAGGGAAAAAAGGAAATCAAATTATGGGTTGGCTTAAATTGATGGCTTTCAACTTGCTTCACATTTTAGGTGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCGCCAATGTTACTGATAGCTCAATGGCTAAGATTGCTTTTGGCTGCCAAAAGCTCCGGGAAGTAGATATTAGCTATTGTCATGAAATCTCGAACATATCTTTGGCATTAATCGGCAGGCATTGTCCAAATATCAAGACTCTAAAACGAAACTATTTTAACAATCTAGATCCTTCCCAACACAAGGGAATTGTCCCTGACAATTATCTAGATGCCTGCCCACAAGATGTGGATTCAGAAGCTGCAGCTATTGCAAAATTCATGCACAACTTGGAGCACCTTGAACTTGGTTTCTCTAAACTATCTGCTAAAGCTCTAACTTCGATCTGTGAAGGATGTCCTAACCTCAAGTACTTGGATTTGTTTGGGTGTGTGAACTTGACAAGCCGAGATATAGCAAATGCTACATCAAGTCTGGAGAATTTGGAGATTAGGAAACCAAATTTCTATATTCCAAGGTCGGTCTTTCACACAGAGAGGTATGACCATTGGAGGTTGTATGATGAGAGATTCCAAACCGATATTTTCCGAATTTGATTCTGCAAGTGCACTCTTAATACTATATTTGTAGCTGCACTTAGAAACCAAGATTAATGTTGCTTTCCTAAGTTGTACAGTTTTTAATTTACCTGTTCTGTTTTATGACAGTTACAAGTCTGTATTATCTTTTAAACTTGTATGGTGAACTAATGTGGCAGAAGGTTGGTACTCTTGTAGTTATTGTTATGGGTTTCAGGTTTCACCTTGTACATCTCTAATCTCTTGATATGTTAATGACAAGACAAC

mRNA sequence

GAAAGGTCGGGAGAGACAACACTATATCTCATTTCTCACGCCAAATGATCGGATTGCGGTTTTTCTTATACACTACGCGCATCCCAACAAAACTCAAAAGGAAAAGAAAAATAAAAAGAAAAACCTTTATTTCCTTTCTTCATTCCTAAATTCATTTCTAAGGACACCCAAAAATGGCAGAGCCGTCGTCGGAGTCATCATCATGGGCGGAGCTGACTCACGAGTGTCTAACCAACATCCTCTCTCGTCTAACCATCGAGCAGCGGTGGCGCGGCCCTATGCTCGTTTGCAAACATTGGTTCCGCGCCGCTAGGGACCCTTCTCTCTTTTCTCACTTCGATCTCGAACCCAGGTTCGAGTCTGCCCCCACCGAGTCTCCGGCCTGGTGGTTGCCGGAGTTCGAGACCAAGATTGATTCCATGCTCCGATCTGCCGTCCGTTGGAGCCTTGGATCTCTTTCAGTTATTCGGGTTAGACACTGCTCCGATTCTTCTCTCGATTTCGTCGCTCAAGGGTGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCGCCAATGTTACTGATAGCTCAATGGCTAAGATTGCTTTTGGCTGCCAAAAGCTCCGGGAAGTAGATATTAGCTATTGTCATGAAATCTCGAACATATCTTTGGCATTAATCGGCAGGCATTGTCCAAATATCAAGACTCTAAAACGAAACTATTTTAACAATCTAGATCCTTCCCAACACAAGGGAATTGTCCCTGACAATTATCTAGATGCCTGCCCACAAGATGTGGATTCAGAAGCTGCAGCTATTGCAAAATTCATGCACAACTTGGAGCACCTTGAACTTGGTTTCTCTAAACTATCTGCTAAAGCTCTAACTTCGATCTGTGAAGGATGTCCTAACCTCAAGTACTTGGATTTGTTTGGGTGTGTGAACTTGACAAGCCGAGATATAGCAAATGCTACATCAAGTCTGGAGAATTTGGAGATTAGGAAACCAAATTTCTATATTCCAAGGTCGGTCTTTCACACAGAGAGGTATGACCATTGGAGGTTGTATGATGAGAGATTCCAAACCGATATTTTCCGAATTTGATTCTGCAAGTGCACTCTTAATACTATATTTGTAGCTGCACTTAGAAACCAAGATTAATGTTGCTTTCCTAAGTTGTACAGTTTTTAATTTACCTGTTCTGTTTTATGACAGTTACAAGTCTGTATTATCTTTTAAACTTGTATGGTGAACTAATGTGGCAGAAGGTTGGTACTCTTGTAGTTATTGTTATGGGTTTCAGGTTTCACCTTGTACATCTCTAATCTCTTGATATGTTAATGACAAGACAAC

Coding sequence (CDS)

ATGGCAGAGCCGTCGTCGGAGTCATCATCATGGGCGGAGCTGACTCACGAGTGTCTAACCAACATCCTCTCTCGTCTAACCATCGAGCAGCGGTGGCGCGGCCCTATGCTCGTTTGCAAACATTGGTTCCGCGCCGCTAGGGACCCTTCTCTCTTTTCTCACTTCGATCTCGAACCCAGGTTCGAGTCTGCCCCCACCGAGTCTCCGGCCTGGTGGTTGCCGGAGTTCGAGACCAAGATTGATTCCATGCTCCGATCTGCCGTCCGTTGGAGCCTTGGATCTCTTTCAGTTATTCGGGTTAGACACTGCTCCGATTCTTCTCTCGATTTCGTCGCTCAAGGGTGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCGCCAATGTTACTGATAGCTCAATGGCTAAGATTGCTTTTGGCTGCCAAAAGCTCCGGGAAGTAGATATTAGCTATTGTCATGAAATCTCGAACATATCTTTGGCATTAATCGGCAGGCATTGTCCAAATATCAAGACTCTAAAACGAAACTATTTTAACAATCTAGATCCTTCCCAACACAAGGGAATTGTCCCTGACAATTATCTAGATGCCTGCCCACAAGATGTGGATTCAGAAGCTGCAGCTATTGCAAAATTCATGCACAACTTGGAGCACCTTGAACTTGGTTTCTCTAAACTATCTGCTAAAGCTCTAACTTCGATCTGTGAAGGATGTCCTAACCTCAAGTACTTGGATTTGTTTGGGTGTGTGAACTTGACAAGCCGAGATATAGCAAATGCTACATCAAGTCTGGAGAATTTGGAGATTAGGAAACCAAATTTCTATATTCCAAGGTCGGTCTTTCACACAGAGAGGTATGACCATTGGAGGTTGTATGATGAGAGATTCCAAACCGATATTTTCCGAATTTGA

Protein sequence

MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI

Homology

[Close]

BLAST of IVF0000780 vs. ExPASy Swiss-Prot
Match: Q9FDX1 (F-box protein SKIP1 OS=Arabidopsis thaliana OX=3702 GN=SKIP1 PE=1 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 3.4e-97
Identity = 180/300 (60.00%), Postives = 217/300 (72.33%), Query Frame = 0


Query: 7   ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPT 66
           + S W  L  E L NI+SRLTI++ W GPM V K W    RDP L+S FDLEP F+S P 
Sbjct: 4   DGSDWGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSYP- 63

Query: 67  ESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEVLSIKSC 126
           ES   W PEFE K+D MLRS V WS G L+ IRVRHCSD +L + A  CPNL+VL+I+S 
Sbjct: 64  ESTHLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHCSDHALSYAADRCPNLQVLAIRSS 123

Query: 127 ANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQH 186
            NVTD+SM KIAF C+ L+E+DISYCHEIS+ +L +IGR+CPN++ LKRN  +    S+H
Sbjct: 124 PNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMD--WSSRH 183

Query: 187 KGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDL 246
            G VP  YLDACPQD D+EA AI K M NLEHLE+ FS+LS K L SICEGCP L+YLDL
Sbjct: 184 IGSVPTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDL 243

Query: 247 FGCVNLTSRDIANATSSLENL-EIRKPNFYIPRS--VFHTERYDHWRLYDERFQTDIFRI 304
           FGCV+L+SRDI +  S L+ L E++KP+ Y+PRS  V  TERY HWRLYDERF     RI
Sbjct: 244 FGCVHLSSRDITSNVSRLKWLKEVKKPDVYVPRSGDVAQTERYGHWRLYDERFDIQAMRI 300

[Close]

BLAST of IVF0000780 vs. ExPASy Swiss-Prot
Match: Q9M096 (Putative F-box/LRR-repeat protein 19 OS=Arabidopsis thaliana OX=3702 GN=FBL19 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 5.7e-76
Identity = 147/276 (53.26%), Postives = 187/276 (67.75%), Query Frame = 0


Query: 11  WAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPA 70
           W+ELT ECL +I SRL+ EQRW GPMLV K+W  A  DP+L + FDLE RF S P ES  
Sbjct: 20  WSELTRECLLDIFSRLSQEQRWIGPMLVSKNWMNACYDPTLNTIFDLETRFLSFP-ESIN 79

Query: 71  WWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEVLSIKSCANVT 130
           WW PEFE K+DS LRS V  S G L+ IR+RHC++ SL + A+ CPNLEVL IK+C NVT
Sbjct: 80  WWTPEFEDKVDSFLRSVVDRSEGGLTEIRIRHCTERSLSYAAERCPNLEVLWIKNCPNVT 139

Query: 131 DSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIV 190
           D+SM KIA  C  LRE+DISY + I++ SL  +GR C N+K LKRN    L PS    + 
Sbjct: 140 DASMEKIAMNCPNLRELDISYSYGITHESLITLGRSCQNLKILKRNLLPRLGPSLPTIVA 199

Query: 191 PDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCV 250
           P +YL   P+  + EA  I K+M  L+HLE+ +S L+A+ L S+C+GC NL+Y+DL GC+
Sbjct: 200 PLDYLATFPRYGNIEARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDLRGCI 259

Query: 251 NLTSRDIANATSSLENL-EIRKPNFYIPRSVFHTER 286
           +LT  DI   TS L+NL EI KP+F  P +V    R
Sbjct: 260 SLTRSDINTNTSGLKNLTEIIKPDFNPPIAVLRVPR 294

[Close]

BLAST of IVF0000780 vs. ExPASy Swiss-Prot
Match: Q9S9V8 (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.9e-23
Identity = 80/255 (31.37%), Postives = 121/255 (47.45%), Query Frame = 0


Query: 2   AEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRF 61
           A  + E  +WAEL  E  ++IL RL   +  +    VCK W R  +DPS++   D+  + 
Sbjct: 12  AMKNGEYRNWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIK- 71

Query: 62  ESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSS-LDFVAQGCPNLEV 121
           E+       +++      I+ +   AV  S G L  I + +  ++S L+++A    NL  
Sbjct: 72  ENLVNSVELFYV------IEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRR 131

Query: 122 LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN 181
           L +  CA V    + + A     L E+DI+Y   I    L ++G+ CPN++TLK N    
Sbjct: 132 LGVVDCAPVLSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLN---- 191

Query: 182 LDPSQHKGIVPDNYLDACPQDV---DSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEG 241
                            C  DV   D  A AIA+ M  L HL+L  + LS   L +I EG
Sbjct: 192 -----------------CTGDVKCCDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEG 238

Query: 242 CPNLKYLDLFGCVNL 253
           CP+LK L L  C+N+
Sbjct: 252 CPHLKNLGLHQCLNI 238

[Close]

BLAST of IVF0000780 vs. ExPASy Swiss-Prot
Match: Q9M0U8 (Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana OX=3702 GN=FBL21 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.3e-19
Identity = 75/251 (29.88%), Postives = 111/251 (44.22%), Query Frame = 0


Query: 7   ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPT 66
           E  +W +L  E  T+IL RL++         VCK W R  +DPS++   +          
Sbjct: 42  ERRNWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKINTRDCL----- 101

Query: 67  ESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV--RHCSDSSLDFVAQGCPNLEVLSIK 126
                    +     SM R  V  S G L  I V     SDS L ++     NL  L + 
Sbjct: 102 --------MYNFDFVSMCRHIVDLSQGGLLEINVDEHFLSDSLLSYITD--RNLRSLGLG 161

Query: 127 SC-ANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDP 186
            C   VT   +         L  ++++  H    + L  IG  CP +KTLK N    L P
Sbjct: 162 MCFPRVTKLGVVNAIAKIPLLETLEVT--HSCIKLDLKAIGHACPQLKTLKLNSLGRLWP 221

Query: 187 SQHKGIVPDNYLDAC-PQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLK 246
           +  K     N LD   P + D +A AIA+ M  L HL+L  ++L+   L +I +GCP+L+
Sbjct: 222 ASDK--YDSNVLDDMGPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLE 273

Query: 247 YLDLFGCVNLT 254
           +LD+  C  ++
Sbjct: 282 HLDVRKCFRIS 273

[Close]

BLAST of IVF0000780 vs. ExPASy Swiss-Prot
Match: Q9UKC9 (F-box/LRR-repeat protein 2 OS=Homo sapiens OX=9606 GN=FBXL2 PE=1 SV=3)

HSP 1 Score: 88.2 bits (217), Expect = 1.7e-16
Identity = 56/187 (29.95%), Postives = 88/187 (47.06%), Query Frame = 0


Query: 93  GSLSVIRVRHC---SDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAFGCQKLREVDI 152
           G L  + +R C    DSSL   AQ C N+E L++  C  +TDS+   ++  C KL+ +D+
Sbjct: 78  GFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDL 137

Query: 153 SYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIV------PDNYLDACPQDVD 212
           + C  I+N SL  I   C N++ L  ++ + +     + +V          L  C Q  D
Sbjct: 138 TSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLED 197

Query: 213 SEAAAIAKFMHNLEHLEL-GFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIANATS 270
                I  + H L  L L   S+++ + +  IC GC  L+ L L GC NLT   +     
Sbjct: 198 EALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGL 257

[Close]

BLAST of IVF0000780 vs. ExPASy TrEMBL
Match: A0A5D3BD72 (F-box protein SKIP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00320 PE=4 SV=1)

HSP 1 Score: 631.3 bits (1627), Expect = 2.0e-177
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPR 60
           MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPR
Sbjct: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPR 60

Query: 61  FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV 120
           FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV
Sbjct: 61  FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV 120

Query: 121 LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN 180
           LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN
Sbjct: 121 LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN 180

Query: 181 LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN 240
           LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN
Sbjct: 181 LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN 240

Query: 241 LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300
           LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Sbjct: 241 LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300

Query: 301 FRI 304
           FRI
Sbjct: 301 FRI 303

[Close]

BLAST of IVF0000780 vs. ExPASy TrEMBL
Match: A0A1S3BUE6 (F-box protein SKIP1 OS=Cucumis melo OX=3656 GN=LOC103493639 PE=4 SV=1)

HSP 1 Score: 631.3 bits (1627), Expect = 2.0e-177
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPR 60
           MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPR
Sbjct: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPR 60

Query: 61  FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV 120
           FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV
Sbjct: 61  FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV 120

Query: 121 LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN 180
           LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN
Sbjct: 121 LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN 180

Query: 181 LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN 240
           LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN
Sbjct: 181 LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN 240

Query: 241 LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300
           LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Sbjct: 241 LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300

Query: 301 FRI 304
           FRI
Sbjct: 301 FRI 303

[Close]

BLAST of IVF0000780 vs. ExPASy TrEMBL
Match: A0A5A7UJH9 (F-box protein SKIP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold323G00770 PE=4 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 7.7e-177
Identity = 302/303 (99.67%), Postives = 302/303 (99.67%), Query Frame = 0


Query: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPR 60
           MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWF AARDPSLFSHFDLEPR
Sbjct: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFHAARDPSLFSHFDLEPR 60

Query: 61  FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV 120
           FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV
Sbjct: 61  FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV 120

Query: 121 LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN 180
           LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN
Sbjct: 121 LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN 180

Query: 181 LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN 240
           LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN
Sbjct: 181 LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN 240

Query: 241 LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300
           LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Sbjct: 241 LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300

Query: 301 FRI 304
           FRI
Sbjct: 301 FRI 303

[Close]

BLAST of IVF0000780 vs. ExPASy TrEMBL
Match: A0A0A0LM72 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G036050 PE=4 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 8.9e-165
Identity = 284/303 (93.73%), Postives = 290/303 (95.71%), Query Frame = 0


Query: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPR 60
           MAEP    S WAELTHECLTNILSRLT+EQRWRGPMLVCKHWFRAA DPSLFSHFDLE R
Sbjct: 1   MAEP----SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKR 60

Query: 61  FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV 120
           FESAPTE PAWWLPEFETKIDSMLRSAVRWSLGSLSVIR+RHCSDSSLD VAQGCPNLEV
Sbjct: 61  FESAPTELPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEV 120

Query: 121 LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN 180
           LSIKSCANVTD SMAKIAFGCQKLREVDISYCHEISN+SLALIGRHCPNIKTLKRN+FNN
Sbjct: 121 LSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNN 180

Query: 181 LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN 240
           LDPSQHKGIVPDNYLDA PQDVDSEAAAIAKFMHNLE+LELGFSKLSAKALT ICEGCPN
Sbjct: 181 LDPSQHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPN 240

Query: 241 LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300
           LKYLDLFGCVNLTSRDI NATSSLE+LEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Sbjct: 241 LKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 299

Query: 301 FRI 304
           FRI
Sbjct: 301 FRI 299

[Close]

BLAST of IVF0000780 vs. ExPASy TrEMBL
Match: A0A6J1KKL1 (F-box protein SKIP1-like OS=Cucurbita maxima OX=3661 GN=LOC111494002 PE=4 SV=1)

HSP 1 Score: 547.0 bits (1408), Expect = 5.1e-152
Identity = 259/295 (87.80%), Postives = 275/295 (93.22%), Query Frame = 0


Query: 9   SSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTES 68
           +SWAELT ECLTNI SRLTIEQRWRGPMLVCK W RAA D SLFSHFDL+PRF+S PTES
Sbjct: 4   ASWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLQPRFDSTPTES 63

Query: 69  PAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEVLSIKSCAN 128
           PAWW P+FETKIDSMLRSAV+WSLGSLS+IR+RHCSDSSL  VAQGCPNLEVLSIKSCAN
Sbjct: 64  PAWWSPQFETKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQLVAQGCPNLEVLSIKSCAN 123

Query: 129 VTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKG 188
           VTD SMAKIA GCQKL+EVDISYCHEISN+SL+LIG+HCPNIKTLKRN+FN LDPSQ KG
Sbjct: 124 VTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQKG 183

Query: 189 IVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFG 248
           IVPD+YL+ACPQDVDSEA AIAKFM NLEHLEL FSK+SAKALT IC+GCPNLKYLDLFG
Sbjct: 184 IVPDSYLNACPQDVDSEAVAIAKFMPNLEHLELCFSKVSAKALTLICKGCPNLKYLDLFG 243

Query: 249 CVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI 304
           CVNLTSRDI NATSSLENLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDIFRI
Sbjct: 244 CVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 298

[Close]

BLAST of IVF0000780 vs. NCBI nr
Match: XP_008452697.1 (PREDICTED: F-box protein SKIP1 [Cucumis melo] >TYJ96405.1 F-box protein SKIP1 [Cucumis melo var. makuwa])

HSP 1 Score: 625 bits (1613), Expect = 2.37e-226
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPR 60
           MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPR
Sbjct: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPR 60

Query: 61  FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV 120
           FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV
Sbjct: 61  FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV 120

Query: 121 LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN 180
           LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN
Sbjct: 121 LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN 180

Query: 181 LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN 240
           LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN
Sbjct: 181 LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN 240

Query: 241 LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300
           LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Sbjct: 241 LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300

Query: 301 FRI 303
           FRI
Sbjct: 301 FRI 303

[Close]

BLAST of IVF0000780 vs. NCBI nr
Match: KAA0056113.1 (F-box protein SKIP1 [Cucumis melo var. makuwa])

HSP 1 Score: 624 bits (1608), Expect = 1.37e-225
Identity = 302/303 (99.67%), Postives = 302/303 (99.67%), Query Frame = 0


Query: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPR 60
           MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWF AARDPSLFSHFDLEPR
Sbjct: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFHAARDPSLFSHFDLEPR 60

Query: 61  FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV 120
           FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV
Sbjct: 61  FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV 120

Query: 121 LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN 180
           LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN
Sbjct: 121 LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN 180

Query: 181 LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN 240
           LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN
Sbjct: 181 LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN 240

Query: 241 LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300
           LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Sbjct: 241 LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300

Query: 301 FRI 303
           FRI
Sbjct: 301 FRI 303

[Close]

BLAST of IVF0000780 vs. NCBI nr
Match: XP_004144728.1 (F-box protein SKIP1 [Cucumis sativus] >KGN61056.1 hypothetical protein Csa_021226 [Cucumis sativus])

HSP 1 Score: 584 bits (1505), Expect = 5.95e-210
Identity = 284/303 (93.73%), Postives = 290/303 (95.71%), Query Frame = 0


Query: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPR 60
           MAEP    S WAELTHECLTNILSRLT+EQRWRGPMLVCKHWFRAA DPSLFSHFDLE R
Sbjct: 1   MAEP----SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKR 60

Query: 61  FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV 120
           FESAPTE PAWWLPEFETKIDSMLRSAVRWSLGSLSVIR+RHCSDSSLD VAQGCPNLEV
Sbjct: 61  FESAPTELPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEV 120

Query: 121 LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN 180
           LSIKSCANVTD SMAKIAFGCQKLREVDISYCHEISN+SLALIGRHCPNIKTLKRN+FNN
Sbjct: 121 LSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNN 180

Query: 181 LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN 240
           LDPSQHKGIVPDNYLDA PQDVDSEAAAIAKFMHNLE+LELGFSKLSAKALT ICEGCPN
Sbjct: 181 LDPSQHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPN 240

Query: 241 LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300
           LKYLDLFGCVNLTSRDI NATSSLE+LEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Sbjct: 241 LKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 299

Query: 301 FRI 303
           FRI
Sbjct: 301 FRI 299

[Close]

BLAST of IVF0000780 vs. NCBI nr
Match: XP_038890479.1 (F-box protein SKIP1 [Benincasa hispida])

HSP 1 Score: 581 bits (1497), Expect = 1.14e-208
Identity = 280/303 (92.41%), Postives = 290/303 (95.71%), Query Frame = 0


Query: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPR 60
           MAEP SESSSWAELTHECLTNILSRLTIEQRWRGPMLVCK W RAA DPSLFSHFDLEPR
Sbjct: 1   MAEPLSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPR 60

Query: 61  FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV 120
           FES PTESPAWW PEFETKIDSMLRSAV WSLGSLS+IR+RHCSDSSLDFVAQGCPNLEV
Sbjct: 61  FESTPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIRHCSDSSLDFVAQGCPNLEV 120

Query: 121 LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN 180
           LSIKSCANVTD SMAKIA GCQKLREVDISYCHEISNISLALIG+HCPNIKT+KRN+FNN
Sbjct: 121 LSIKSCANVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTIKRNFFNN 180

Query: 181 LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN 240
           LDPSQHKGIVPDNYL++CPQDVDSEAAAIAKFM NLEHLELGFSKLSAKAL+ ICEGCP 
Sbjct: 181 LDPSQHKGIVPDNYLNSCPQDVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPK 240

Query: 241 LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300
           LK+LDLFGCVNLTSRDIANATSS+ENLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDI
Sbjct: 241 LKFLDLFGCVNLTSRDIANATSSMENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI 300

Query: 301 FRI 303
           FRI
Sbjct: 301 FRI 303

[Close]

BLAST of IVF0000780 vs. NCBI nr
Match: KAG6599142.1 (F-box protein SKIP1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030085.1 F-box protein SKIP1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 543 bits (1398), Expect = 1.17e-193
Identity = 263/303 (86.80%), Postives = 277/303 (91.42%), Query Frame = 0


Query: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPR 60
           MAEP     SWAELT ECLTNI SRLTIEQRWRGPMLVCK W RAA D SLFSHFDLEPR
Sbjct: 1   MAEP-----SWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPR 60

Query: 61  FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV 120
           F+S PTESPAWW P+FE KIDSMLRSAV+WSLGSLS+IR+RHCSDSSL  VAQGCPNLEV
Sbjct: 61  FDSTPTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQLVAQGCPNLEV 120

Query: 121 LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN 180
           LSIKSCANVTD SMAKIA GCQKL+EVDISYCHEISN+SL+LIG+HCPNIKTLKRN+FN 
Sbjct: 121 LSIKSCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNT 180

Query: 181 LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN 240
           LDPSQ KGIVPD+YL+ACPQDVDSEA AIAKFM NLEHL+L FSKLSAKALT IC+GCPN
Sbjct: 181 LDPSQQKGIVPDSYLNACPQDVDSEAVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPN 240

Query: 241 LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300
           LKYLDLFGCVNLTSRDI NATSSLENLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDI
Sbjct: 241 LKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI 298

Query: 301 FRI 303
           FRI
Sbjct: 301 FRI 298

[Close]

BLAST of IVF0000780 vs. TAIR 10
Match: AT5G57900.1 (SKP1 interacting partner 1 )

HSP 1 Score: 356.3 bits (913), Expect = 2.4e-98
Identity = 180/300 (60.00%), Postives = 217/300 (72.33%), Query Frame = 0


Query: 7   ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPT 66
           + S W  L  E L NI+SRLTI++ W GPM V K W    RDP L+S FDLEP F+S P 
Sbjct: 4   DGSDWGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSYP- 63

Query: 67  ESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEVLSIKSC 126
           ES   W PEFE K+D MLRS V WS G L+ IRVRHCSD +L + A  CPNL+VL+I+S 
Sbjct: 64  ESTHLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHCSDHALSYAADRCPNLQVLAIRSS 123

Query: 127 ANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQH 186
            NVTD+SM KIAF C+ L+E+DISYCHEIS+ +L +IGR+CPN++ LKRN  +    S+H
Sbjct: 124 PNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMD--WSSRH 183

Query: 187 KGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDL 246
            G VP  YLDACPQD D+EA AI K M NLEHLE+ FS+LS K L SICEGCP L+YLDL
Sbjct: 184 IGSVPTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDL 243

Query: 247 FGCVNLTSRDIANATSSLENL-EIRKPNFYIPRS--VFHTERYDHWRLYDERFQTDIFRI 304
           FGCV+L+SRDI +  S L+ L E++KP+ Y+PRS  V  TERY HWRLYDERF     RI
Sbjct: 244 FGCVHLSSRDITSNVSRLKWLKEVKKPDVYVPRSGDVAQTERYGHWRLYDERFDIQAMRI 300

[Close]

BLAST of IVF0000780 vs. TAIR 10
Match: AT4G30640.1 (RNI-like superfamily protein )

HSP 1 Score: 285.8 bits (730), Expect = 4.0e-77
Identity = 147/276 (53.26%), Postives = 187/276 (67.75%), Query Frame = 0


Query: 11  WAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPA 70
           W+ELT ECL +I SRL+ EQRW GPMLV K+W  A  DP+L + FDLE RF S P ES  
Sbjct: 20  WSELTRECLLDIFSRLSQEQRWIGPMLVSKNWMNACYDPTLNTIFDLETRFLSFP-ESIN 79

Query: 71  WWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEVLSIKSCANVT 130
           WW PEFE K+DS LRS V  S G L+ IR+RHC++ SL + A+ CPNLEVL IK+C NVT
Sbjct: 80  WWTPEFEDKVDSFLRSVVDRSEGGLTEIRIRHCTERSLSYAAERCPNLEVLWIKNCPNVT 139

Query: 131 DSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIV 190
           D+SM KIA  C  LRE+DISY + I++ SL  +GR C N+K LKRN    L PS    + 
Sbjct: 140 DASMEKIAMNCPNLRELDISYSYGITHESLITLGRSCQNLKILKRNLLPRLGPSLPTIVA 199

Query: 191 PDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCV 250
           P +YL   P+  + EA  I K+M  L+HLE+ +S L+A+ L S+C+GC NL+Y+DL GC+
Sbjct: 200 PLDYLATFPRYGNIEARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDLRGCI 259

Query: 251 NLTSRDIANATSSLENL-EIRKPNFYIPRSVFHTER 286
           +LT  DI   TS L+NL EI KP+F  P +V    R
Sbjct: 260 SLTRSDINTNTSGLKNLTEIIKPDFNPPIAVLRVPR 294

[Close]

BLAST of IVF0000780 vs. TAIR 10
Match: AT4G05497.1 (RNI-like superfamily protein )

HSP 1 Score: 111.3 bits (277), Expect = 1.4e-24
Identity = 80/255 (31.37%), Postives = 121/255 (47.45%), Query Frame = 0


Query: 2   AEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRF 61
           A  + E  +WAEL  E  ++IL RL   +  +    VCK W R  +DPS++   D+  + 
Sbjct: 12  AMKNGEYRNWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIK- 71

Query: 62  ESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSS-LDFVAQGCPNLEV 121
           E+       +++      I+ +   AV  S G L  I + +  ++S L+++A    NL  
Sbjct: 72  ENLVNSVELFYV------IEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRR 131

Query: 122 LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN 181
           L +  CA V    + + A     L E+DI+Y   I    L ++G+ CPN++TLK N    
Sbjct: 132 LGVVDCAPVLSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLN---- 191

Query: 182 LDPSQHKGIVPDNYLDACPQDV---DSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEG 241
                            C  DV   D  A AIA+ M  L HL+L  + LS   L +I EG
Sbjct: 192 -----------------CTGDVKCCDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEG 238

Query: 242 CPNLKYLDLFGCVNL 253
           CP+LK L L  C+N+
Sbjct: 252 CPHLKNLGLHQCLNI 238

[Close]

BLAST of IVF0000780 vs. TAIR 10
Match: AT4G05470.1 (RNI-like superfamily protein )

HSP 1 Score: 98.6 bits (244), Expect = 9.2e-21
Identity = 75/251 (29.88%), Postives = 111/251 (44.22%), Query Frame = 0


Query: 7   ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPT 66
           E  +W +L  E  T+IL RL++         VCK W R  +DPS++   +          
Sbjct: 42  ERRNWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKINTRDCL----- 101

Query: 67  ESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRV--RHCSDSSLDFVAQGCPNLEVLSIK 126
                    +     SM R  V  S G L  I V     SDS L ++     NL  L + 
Sbjct: 102 --------MYNFDFVSMCRHIVDLSQGGLLEINVDEHFLSDSLLSYITD--RNLRSLGLG 161

Query: 127 SC-ANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDP 186
            C   VT   +         L  ++++  H    + L  IG  CP +KTLK N    L P
Sbjct: 162 MCFPRVTKLGVVNAIAKIPLLETLEVT--HSCIKLDLKAIGHACPQLKTLKLNSLGRLWP 221

Query: 187 SQHKGIVPDNYLDAC-PQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLK 246
           +  K     N LD   P + D +A AIA+ M  L HL+L  ++L+   L +I +GCP+L+
Sbjct: 222 ASDK--YDSNVLDDMGPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLE 273

Query: 247 YLDLFGCVNLT 254
           +LD+  C  ++
Sbjct: 282 HLDVRKCFRIS 273

[Close]

BLAST of IVF0000780 vs. TAIR 10
Match: AT5G52480.1 (RNI-like superfamily protein )

HSP 1 Score: 84.7 bits (208), Expect = 1.4e-16
Identity = 62/210 (29.52%), Postives = 95/210 (45.24%), Query Frame = 0


Query: 81  DSMLRSAVRWSLGSLSVIRVRHC-SDSSLDFVAQGCPNLEVLSIKSCANVTDSSMAKIAF 140
           +++ R+AV  S G L  I +    SDS L ++A+   NL  L +  C+ +TD    +   
Sbjct: 16  EAICRNAVDRSEGGLLEINIGDFGSDSLLTYIAERSSNLRSLRL-MCSEITDDGFVQAVV 75

Query: 141 GCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNNLDPSQHKGIVPDNYLDACP 200
               L E+++S    +S  S+ L G  CPN+KTL  N    L                  
Sbjct: 76  KLPMLEELEVSGI-SLSGESMKLAGLSCPNLKTLMLNRLFYLS----------------S 135

Query: 201 QDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPNLKYLDLFGCVNLTSRDIAN 260
            D D +A AIA+ M  L HL+L  +KL+   L +I +GCP+L++LDL  C+NL       
Sbjct: 136 DDDDHDAIAIAESMPKLRHLQLCGNKLTKTGLNAILDGCPHLEHLDLRQCINLVGNLEKR 195

Query: 261 ATSSLENLEIRKPNFYIPRSVFHTERYDHW 290
               +++L     +            Y HW
Sbjct: 196 CFEKIKDLRRHNDSTSADYPFSFETYYFHW 207

The following BLAST results are available for this feature:

BLAST of IVF0000780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FDX1	3.4e-97	60.00	F-box protein SKIP1 OS=Arabidopsis thaliana OX=3702 GN=SKIP1 PE=1 SV=1	[more]
Q9M096	5.7e-76	53.26	Putative F-box/LRR-repeat protein 19 OS=Arabidopsis thaliana OX=3702 GN=FBL19 PE...	[more]
Q9S9V8	1.9e-23	31.37	Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4...	[more]
Q9M0U8	1.3e-19	29.88	Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana OX=3702 GN=FBL21 PE...	[more]
Q9UKC9	1.7e-16	29.95	F-box/LRR-repeat protein 2 OS=Homo sapiens OX=9606 GN=FBXL2 PE=1 SV=3	[more]

BLAST of IVF0000780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BD72	2.0e-177	100.00	F-box protein SKIP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G...	[more]
A0A1S3BUE6	2.0e-177	100.00	F-box protein SKIP1 OS=Cucumis melo OX=3656 GN=LOC103493639 PE=4 SV=1	[more]
A0A5A7UJH9	7.7e-177	99.67	F-box protein SKIP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold323G...	[more]
A0A0A0LM72	8.9e-165	93.73	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G036050 PE=4 ...	[more]
A0A6J1KKL1	5.1e-152	87.80	F-box protein SKIP1-like OS=Cucurbita maxima OX=3661 GN=LOC111494002 PE=4 SV=1	[more]

BLAST of IVF0000780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452697.1	2.37e-226	100.00	PREDICTED: F-box protein SKIP1 [Cucumis melo] >TYJ96405.1 F-box protein SKIP1 [C...	[more]
KAA0056113.1	1.37e-225	99.67	F-box protein SKIP1 [Cucumis melo var. makuwa]	[more]
XP_004144728.1	5.95e-210	93.73	F-box protein SKIP1 [Cucumis sativus] >KGN61056.1 hypothetical protein Csa_02122...	[more]
XP_038890479.1	1.14e-208	92.41	F-box protein SKIP1 [Benincasa hispida]	[more]
KAG6599142.1	1.17e-193	86.80	F-box protein SKIP1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030085...	[more]

BLAST of IVF0000780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57900.1	2.4e-98	60.00	SKP1 interacting partner 1	[more]
AT4G30640.1	4.0e-77	53.26	RNI-like superfamily protein	[more]
AT4G05497.1	1.4e-24	31.37	RNI-like superfamily protein	[more]
AT4G05470.1	9.2e-21	29.88	RNI-like superfamily protein	[more]
AT5G52480.1	1.4e-16	29.52	RNI-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006553	Leucine-rich repeat, cysteine-containing subtype	SMART	SM00367	LRR_CC_2	coord: 115..140 e-value: 0.0023 score: 27.2 coord: 213..237 e-value: 220.0 score: 4.0 coord: 141..166 e-value: 0.0093 score: 25.2 coord: 238..263 e-value: 0.024 score: 23.8
None	No IPR available	GENE3D	1.20.1280.50		coord: 10..51 e-value: 4.2E-9 score: 38.1
None	No IPR available	PANTHER	PTHR16134:SF29	F-BOX PROTEIN SKIP1	coord: 10..303
None	No IPR available	PANTHER	PTHR16134	F-BOX/TPR REPEAT PROTEIN POF3	coord: 10..303
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 84..266
IPR001611	Leucine-rich repeat	PFAM	PF13516	LRR_6	coord: 141..157 e-value: 1.3 score: 9.3
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 16..56 e-value: 1.2E-5 score: 25.1
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 80..274 e-value: 7.5E-36 score: 125.5
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 2..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0000780.2	IVF0000780.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0005515	protein binding