IVF0000736 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTACTGTATAAGCAGAAGAAGAATCAGAATGTTAAGGGCAACAGGCTCTTGATCAGTATTAATGTCCTAGGCAGTGCTGGTCCGATTCGATTTATTGTTAACGAGGAGCAACTTGTTGCTGCTGTTATTGATACCGCGTTGAAATCATATGCGCGTGAGGGCCGATTGCCGATTCTTGGGTCCGATCTTAGAGATTTTCAGCTTTACTGCCCAAATACTGGACCAGATGGTAATTCAATTGATTTTTCTCTCTTTTGATAATTCAATTGATTTTTCTCTCTTTTGATAATTCAATTATCATCTTCTGTTACAATTTTCATTCACAATCATACTGCATGTGTCTAATCTGAAATAGCTGGAAAGATTGTGATTTTATTCATAATTTTTTTTTATCTTTATGTTAATTTCGTTTATTGGTTTTGTGATGGGGATCCCTGTTCTGGGATTTGTTTTGTGGTGGGATATCTATTTCATGTCTTGAGAATCCTCTGATCACAATGGGATAAAACAATCTGGTGCTCCTTATTCTTATGTTGTTTGTAAATTTTTCTGCAGCCTTGAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCATGCTATGCAAGAAGCCACAGCCAGAAAAAGTGTCAGAAGAAGGAAAATCCCCACCAGGGCCAACAATCCCACGCAAAAGCGCCGGGAGCTGGAAGTCATGGATCAACAAGTCTCTGAATTTGAAGATCTATTCCCATTGA ATGTTACTGTATAAGCAGAAGAAGAATCAGAATGTTAAGGGCAACAGGCTCTTGATCAGTATTAATGTCCTAGGCAGTGCTGGTCCGATTCGATTTATTGTTAACGAGGAGCAACTTGTTGCTGCTGTTATTGATACCGCGTTGAAATCATATGCGCGTGAGGGCCGATTGCCGATTCTTGGGTCCGATCTTAGAGATTTTCAGCTTTACTGCCCAAATACTGGACCAGATGCCTTGAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCATGCTATGCAAGAAGCCACAGCCAGAAAAAGTGTCAGAAGAAGGAAAATCCCCACCAGGGCCAACAATCCCACGCAAAAGCGCCGGGAGCTGGAAGTCATGGATCAACAAGTCTCTGAATTTGAAGATCTATTCCCATTGA ATGTTACTGTATAAGCAGAAGAAGAATCAGAATGTTAAGGGCAACAGGCTCTTGATCAGTATTAATGTCCTAGGCAGTGCTGGTCCGATTCGATTTATTGTTAACGAGGAGCAACTTGTTGCTGCTGTTATTGATACCGCGTTGAAATCATATGCGCGTGAGGGCCGATTGCCGATTCTTGGGTCCGATCTTAGAGATTTTCAGCTTTACTGCCCAAATACTGGACCAGATGCCTTGAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCATGCTATGCAAGAAGCCACAGCCAGAAAAAGTGTCAGAAGAAGGAAAATCCCCACCAGGGCCAACAATCCCACGCAAAAGCGCCGGGAGCTGGAAGTCATGGATCAACAAGTCTCTGAATTTGAAGATCTATTCCCATTGA MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPILGSDLRDFQLYCPNTGPDALSPWDTIGSHGARNFMLCKKPQPEKVSEEGKSPPGPTIPRKSAGSWKSWINKSLNLKIYSH Homology
BLAST of IVF0000736 vs. ExPASy Swiss-Prot
Match: Q56XJ7 (Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 PE=2 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 5.4e-05 Identity = 35/106 (33.02%), Postives = 51/106 (48.11%), Query Frame = 0
BLAST of IVF0000736 vs. ExPASy TrEMBL
Match: A0A1S4DSB9 (uncharacterized protein At4g22758-like OS=Cucumis melo OX=3656 GN=LOC107990297 PE=4 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 4.3e-74 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
BLAST of IVF0000736 vs. ExPASy TrEMBL
Match: A0A0A0KUW8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G569870 PE=4 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 1.2e-71 Identity = 135/139 (97.12%), Postives = 136/139 (97.84%), Query Frame = 0
BLAST of IVF0000736 vs. ExPASy TrEMBL
Match: A0A6J1FHE7 (uncharacterized protein At4g22758-like OS=Cucurbita moschata OX=3662 GN=LOC111445404 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 6.1e-68 Identity = 128/139 (92.09%), Postives = 131/139 (94.24%), Query Frame = 0
BLAST of IVF0000736 vs. ExPASy TrEMBL
Match: A0A6J1DDM7 (uncharacterized protein At4g22758-like OS=Momordica charantia OX=3673 GN=LOC111020076 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 1.4e-64 Identity = 124/140 (88.57%), Postives = 129/140 (92.14%), Query Frame = 0
BLAST of IVF0000736 vs. ExPASy TrEMBL
Match: A0A6J1H7B9 (uncharacterized protein At4g22758-like OS=Cucurbita moschata OX=3662 GN=LOC111460829 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 1.7e-62 Identity = 120/139 (86.33%), Postives = 127/139 (91.37%), Query Frame = 0
BLAST of IVF0000736 vs. NCBI nr
Match: XP_016898863.1 (PREDICTED: uncharacterized protein At4g22758-like [Cucumis melo]) HSP 1 Score: 286 bits (733), Expect = 1.23e-97 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
BLAST of IVF0000736 vs. NCBI nr
Match: XP_004150595.1 (uncharacterized protein At4g22758 [Cucumis sativus] >KGN51491.1 hypothetical protein Csa_007791 [Cucumis sativus]) HSP 1 Score: 278 bits (712), Expect = 1.96e-94 Identity = 135/139 (97.12%), Postives = 136/139 (97.84%), Query Frame = 0
BLAST of IVF0000736 vs. NCBI nr
Match: XP_038875276.1 (uncharacterized protein At4g22758 isoform X2 [Benincasa hispida]) HSP 1 Score: 268 bits (685), Expect = 2.58e-90 Identity = 130/139 (93.53%), Postives = 132/139 (94.96%), Query Frame = 0
BLAST of IVF0000736 vs. NCBI nr
Match: XP_038875275.1 (uncharacterized protein At4g22758 isoform X1 [Benincasa hispida]) HSP 1 Score: 268 bits (685), Expect = 2.76e-90 Identity = 130/139 (93.53%), Postives = 132/139 (94.96%), Query Frame = 0
BLAST of IVF0000736 vs. NCBI nr
Match: XP_022939519.1 (uncharacterized protein At4g22758-like [Cucurbita moschata] >XP_023551231.1 uncharacterized protein At4g22758-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 266 bits (680), Expect = 1.49e-89 Identity = 128/139 (92.09%), Postives = 131/139 (94.24%), Query Frame = 0
BLAST of IVF0000736 vs. TAIR 10
Match: AT1G70780.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 188.3 bits (477), Expect = 4.0e-48 Identity = 93/140 (66.43%), Postives = 106/140 (75.71%), Query Frame = 0
BLAST of IVF0000736 vs. TAIR 10
Match: AT1G23150.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70780.1); Has 124 Blast hits to 124 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 177.9 bits (450), Expect = 5.4e-45 Identity = 96/142 (67.61%), Postives = 105/142 (73.94%), Query Frame = 0
BLAST of IVF0000736 vs. TAIR 10
Match: AT5G37730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 104.4 bits (259), Expect = 7.7e-23 Identity = 53/105 (50.48%), Postives = 74/105 (70.48%), Query Frame = 0
BLAST of IVF0000736 vs. TAIR 10
Match: AT2G01554.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 55.5 bits (132), Expect = 4.1e-08 Identity = 47/141 (33.33%), Postives = 65/141 (46.10%), Query Frame = 0
BLAST of IVF0000736 vs. TAIR 10
Match: AT4G22758.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G27830.1). ) HSP 1 Score: 48.9 bits (115), Expect = 3.8e-06 Identity = 35/106 (33.02%), Postives = 51/106 (48.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|