IVF0000521 (gene) Melon (IVF77) v1

Overview


Name	IVF0000521
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr01: 15502264 .. 15502668 (-)
RNA-Seq Expression	IVF0000521
Synteny	IVF0000521

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTGGAAAAAGAAAATGCTAGAGGAAGAACAAACTCTACCTCTTCAAAGGGTAATCGCCCATCTTCTTCTTCTAATTCTACACCCTCACCTATGAGTGCAGATCAATATGCAATGGATTTAGGGTTTACCACAGTAACCCGATCCAGATCAAGATCGTCCAGCATACGGATTGGGTCTCCAACGGAGTCATCAACTCCACCTAAGCCTTCGACCAATCTTATCCGTCCTTCTGGCGGAGTCGTTCAAATGAGGTCTCCTGTCTCTCCTTCATCCAATAGGAAGTCTTCTACTCCTCCTACAACTTATTCTCAGGCTGTCACCCCCGATAAACGGTTTGTGCCAAGACCCGAGATCAAATCTTATTTTCAAAAGCCTATCGTATTTATGATCCTATCATAG

mRNA sequence

ATGAGTTTGGAAAAAGAAAATGCTAGAGGAAGAACAAACTCTACCTCTTCAAAGGGTAATCGCCCATCTTCTTCTTCTAATTCTACACCCTCACCTATGAGTGCAGATCAATATGCAATGGATTTAGGGTTTACCACAGTAACCCGATCCAGATCAAGATCGTCCAGCATACGGATTGGGTCTCCAACGGAGTCATCAACTCCACCTAAGCCTTCGACCAATCTTATCCGTCCTTCTGGCGGAGTCGTTCAAATGAGGTCTCCTGTCTCTCCTTCATCCAATAGGAAGTCTTCTACTCCTCCTACAACTTATTCTCAGGCTGTCACCCCCGATAAACGGTTTGTGCCAAGACCCGAGATCAAATCTTATTTTCAAAAGCCTATCGTATTTATGATCCTATCATAG

Coding sequence (CDS)

ATGAGTTTGGAAAAAGAAAATGCTAGAGGAAGAACAAACTCTACCTCTTCAAAGGGTAATCGCCCATCTTCTTCTTCTAATTCTACACCCTCACCTATGAGTGCAGATCAATATGCAATGGATTTAGGGTTTACCACAGTAACCCGATCCAGATCAAGATCGTCCAGCATACGGATTGGGTCTCCAACGGAGTCATCAACTCCACCTAAGCCTTCGACCAATCTTATCCGTCCTTCTGGCGGAGTCGTTCAAATGAGGTCTCCTGTCTCTCCTTCATCCAATAGGAAGTCTTCTACTCCTCCTACAACTTATTCTCAGGCTGTCACCCCCGATAAACGGTTTGTGCCAAGACCCGAGATCAAATCTTATTTTCAAAAGCCTATCGTATTTATGATCCTATCATAG

Protein sequence

MSLEKENARGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIGSPTESSTPPKPSTNLIRPSGGVVQMRSPVSPSSNRKSSTPPTTYSQAVTPDKRFVPRPEIKSYFQKPIVFMILS

Homology

[Close]

BLAST of IVF0000521 vs. ExPASy TrEMBL
Match: A0A5A7U8A0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G00530 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.1e-49
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MSLEKENARGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIG 60
           MSLEKENARGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIG
Sbjct: 1   MSLEKENARGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIG 60

Query: 61  SPTESSTPPKPSTNLIRPSGGVVQMRSPVSPSSNRKSSTPPTTYSQAVTPDKR 114
           SPTESSTPPKPSTNLIRPSGGVVQMRSPVSPSSNRKSSTPPTTYSQAVTPDKR
Sbjct: 61  SPTESSTPPKPSTNLIRPSGGVVQMRSPVSPSSNRKSSTPPTTYSQAVTPDKR 113

[Close]

BLAST of IVF0000521 vs. ExPASy TrEMBL
Match: A0A5A7URC1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold697G00720 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.6e-49
Identity = 112/129 (86.82%), Postives = 118/129 (91.47%), Query Frame = 0


Query: 1   MSLEKENARGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIG 60
           MS EK +ARGRTNSTSSKGN PSSSSNS  SPM++DQYAMDL FTTVTRSRSRSSSIR G
Sbjct: 1   MSSEKGSARGRTNSTSSKGNHPSSSSNSASSPMNSDQYAMDLEFTTVTRSRSRSSSIRTG 60

Query: 61  SPTESSTPPKPSTNLIRPSGGVVQMRSPVSPSSNRKSSTPPTTYSQAVTPDKRFVPRPEI 120
           SPTESSTPP+P  NLIRPSGGVVQMR P SPSSNR+SSTPPTTYSQAVTPDKRFVPRP+I
Sbjct: 61  SPTESSTPPRPLANLIRPSGGVVQMRPPTSPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120

Query: 121 KSYFQKPIV 130
           KSYFQKPIV
Sbjct: 121 KSYFQKPIV 129

[Close]

BLAST of IVF0000521 vs. ExPASy TrEMBL
Match: A0A5A7TM80 (Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold592G00220 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 6.1e-49
Identity = 112/129 (86.82%), Postives = 117/129 (90.70%), Query Frame = 0


Query: 1   MSLEKENARGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIG 60
           MS +K +ARGRTNSTSSKGNRP SSSNS PSP+SADQYAMDLGFTTVTR  SRS  I IG
Sbjct: 1   MSSDKGSARGRTNSTSSKGNRPPSSSNSAPSPLSADQYAMDLGFTTVTRFISRSFGIWIG 60

Query: 61  SPTESSTPPKPSTNLIRPSGGVVQMRSPVSPSSNRKSSTPPTTYSQAVTPDKRFVPRPEI 120
           SPTESSTPP+PSTNLIRPS GVVQMR P SPSSNR+SSTPPTTYSQAVTPDKRFVPRPEI
Sbjct: 61  SPTESSTPPRPSTNLIRPSSGVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPEI 120

Query: 121 KSYFQKPIV 130
           KSYFQKPIV
Sbjct: 121 KSYFQKPIV 129

[Close]

BLAST of IVF0000521 vs. ExPASy TrEMBL
Match: A0A5D3CKX1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00620 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.4e-48
Identity = 112/129 (86.82%), Postives = 116/129 (89.92%), Query Frame = 0


Query: 1   MSLEKENARGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIG 60
           MS EK + RGRTNSTSSKGNRPSSSSNS PSPMSADQY MDLGFTTV RSRSRSSSIR  
Sbjct: 1   MSSEKGSPRGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTE 60

Query: 61  SPTESSTPPKPSTNLIRPSGGVVQMRSPVSPSSNRKSSTPPTTYSQAVTPDKRFVPRPEI 120
           SPTESSTPP+P  NLIRPSG VVQMR P SPSSNR+SSTPPTTYSQAVTPDKRFVPRP+I
Sbjct: 61  SPTESSTPPRPLANLIRPSGRVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120

Query: 121 KSYFQKPIV 130
           KSYFQKPIV
Sbjct: 121 KSYFQKPIV 129

[Close]

BLAST of IVF0000521 vs. ExPASy TrEMBL
Match: E5GCE6 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.5e-47
Identity = 111/129 (86.05%), Postives = 116/129 (89.92%), Query Frame = 0


Query: 1   MSLEKENARGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIG 60
           MS EK +ARGRTNSTSSKG+RPSSSSNS PSPMSA QY MDLGFT VTRSRSR SSI IG
Sbjct: 1   MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIWIG 60

Query: 61  SPTESSTPPKPSTNLIRPSGGVVQMRSPVSPSSNRKSSTPPTTYSQAVTPDKRFVPRPEI 120
           SPTESSTPP+PS NLIRPSGGV+QMR P SPSSNR+SSTPPTTYSQAVT DKRFVPRPEI
Sbjct: 61  SPTESSTPPRPSVNLIRPSGGVIQMRPPASPSSNRESSTPPTTYSQAVTLDKRFVPRPEI 120

Query: 121 KSYFQKPIV 130
           KSYFQK IV
Sbjct: 121 KSYFQKSIV 129

[Close]

BLAST of IVF0000521 vs. NCBI nr
Match: KAA0056175.1 (hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa])

HSP 1 Score: 203 bits (517), Expect = 7.55e-65
Identity = 112/129 (86.82%), Postives = 118/129 (91.47%), Query Frame = 0


Query: 1   MSLEKENARGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIG 60
           MS EK +ARGRTNSTSSKGN PSSSSNS  SPM++DQYAMDL FTTVTRSRSRSSSIR G
Sbjct: 1   MSSEKGSARGRTNSTSSKGNHPSSSSNSASSPMNSDQYAMDLEFTTVTRSRSRSSSIRTG 60

Query: 61  SPTESSTPPKPSTNLIRPSGGVVQMRSPVSPSSNRKSSTPPTTYSQAVTPDKRFVPRPEI 120
           SPTESSTPP+P  NLIRPSGGVVQMR P SPSSNR+SSTPPTTYSQAVTPDKRFVPRP+I
Sbjct: 61  SPTESSTPPRPLANLIRPSGGVVQMRPPTSPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120

Query: 121 KSYFQKPIV 129
           KSYFQKPIV
Sbjct: 121 KSYFQKPIV 129

[Close]

BLAST of IVF0000521 vs. NCBI nr
Match: KAA0049709.1 (hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa])

HSP 1 Score: 204 bits (520), Expect = 8.27e-65
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MSLEKENARGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIG 60
           MSLEKENARGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIG
Sbjct: 1   MSLEKENARGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIG 60

Query: 61  SPTESSTPPKPSTNLIRPSGGVVQMRSPVSPSSNRKSSTPPTTYSQAVTPDKR 113
           SPTESSTPPKPSTNLIRPSGGVVQMRSPVSPSSNRKSSTPPTTYSQAVTPDKR
Sbjct: 61  SPTESSTPPKPSTNLIRPSGGVVQMRSPVSPSSNRKSSTPPTTYSQAVTPDKR 113

[Close]

BLAST of IVF0000521 vs. NCBI nr
Match: TYK11076.1 (hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 201 bits (512), Expect = 4.36e-64
Identity = 112/129 (86.82%), Postives = 116/129 (89.92%), Query Frame = 0


Query: 1   MSLEKENARGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIG 60
           MS EK + RGRTNSTSSKGNRPSSSSNS PSPMSADQY MDLGFTTV RSRSRSSSIR  
Sbjct: 1   MSSEKGSPRGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTE 60

Query: 61  SPTESSTPPKPSTNLIRPSGGVVQMRSPVSPSSNRKSSTPPTTYSQAVTPDKRFVPRPEI 120
           SPTESSTPP+P  NLIRPSG VVQMR P SPSSNR+SSTPPTTYSQAVTPDKRFVPRP+I
Sbjct: 61  SPTESSTPPRPLANLIRPSGRVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120

Query: 121 KSYFQKPIV 129
           KSYFQKPIV
Sbjct: 121 KSYFQKPIV 129

[Close]

BLAST of IVF0000521 vs. NCBI nr
Match: ADN34145.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 197 bits (501), Expect = 6.24e-62
Identity = 111/129 (86.05%), Postives = 116/129 (89.92%), Query Frame = 0


Query: 1   MSLEKENARGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIG 60
           MS EK +ARGRTNSTSSKG+RPSSSSNS PSPMSA QY MDLGFT VTRSRSR SSI IG
Sbjct: 1   MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIWIG 60

Query: 61  SPTESSTPPKPSTNLIRPSGGVVQMRSPVSPSSNRKSSTPPTTYSQAVTPDKRFVPRPEI 120
           SPTESSTPP+PS NLIRPSGGV+QMR P SPSSNR+SSTPPTTYSQAVT DKRFVPRPEI
Sbjct: 61  SPTESSTPPRPSVNLIRPSGGVIQMRPPASPSSNRESSTPPTTYSQAVTLDKRFVPRPEI 120

Query: 121 KSYFQKPIV 129
           KSYFQK IV
Sbjct: 121 KSYFQKSIV 129

[Close]

BLAST of IVF0000521 vs. NCBI nr
Match: KAA0026217.1 (hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa] >TYK30739.1 hypothetical protein E5676_scaffold343G00750 [Cucumis melo var. makuwa])

HSP 1 Score: 193 bits (490), Expect = 2.67e-60
Identity = 109/129 (84.50%), Postives = 113/129 (87.60%), Query Frame = 0


Query: 1   MSLEKENARGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIG 60
           MS +K NARGRTNSTSSKGNR SSSSNS PSPMSADQYAMDLGFT VTRSRSR S I IG
Sbjct: 1   MSSKKGNARGRTNSTSSKGNRLSSSSNSAPSPMSADQYAMDLGFTIVTRSRSRLSGIGIG 60

Query: 61  SPTESSTPPKPSTNLIRPSGGVVQMRSPVSPSSNRKSSTPPTTYSQAVTPDKRFVPRPEI 120
            PTESSTPP+PS NLIRP G VVQM+ P SPSSNRKSSTPPTTYSQAVTPDKRFVPRP+I
Sbjct: 61  FPTESSTPPRPSANLIRPFGRVVQMKPPASPSSNRKSSTPPTTYSQAVTPDKRFVPRPKI 120

Query: 121 KSYFQKPIV 129
           K YFQK IV
Sbjct: 121 KFYFQKSIV 129

The following BLAST results are available for this feature:

BLAST of IVF0000521 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0000521 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U8A0	2.1e-49	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7URC1	3.6e-49	86.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TM80	6.1e-49	86.82	Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A5D3CKX1	1.4e-48	86.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
E5GCE6	2.5e-47	86.05	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of IVF0000521 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056175.1	7.55e-65	86.82	hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa]	[more]
KAA0049709.1	8.27e-65	100.00	hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]	[more]
TYK11076.1	4.36e-64	86.82	hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]	[more]
ADN34145.1	6.24e-62	86.05	hypothetical protein [Cucumis melo subsp. melo]	[more]
KAA0026217.1	2.67e-60	84.50	hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa] >TYK3073...	[more]

BLAST of IVF0000521 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0000521.1	IVF0000521.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding