IVF0000143 (gene) Melon (IVF77) v1

Overview


Name	IVF0000143
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Agamous-like MADS-box protein AGL62
Location	chr08: 1090814 .. 1091755 (-)
RNA-Seq Expression	IVF0000143
Synteny	IVF0000143

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGATCGTAAACGAAGACGATCGGTTAATTACATTTTCCAAACGAAGGTCAGGCATATACAAGAAGGCAAGCGAATTAGCTACCTTATGTGGGGCTGAAGTTGGAGTCGTCGTGTTTTCGCCGGCAGGAAAACCGTTCTCGTTTGCACATCCATGCATCGAAACCATCGCAAACAAATTTCTGAATGACAAGAACAAAAACAAGGGAAACAAGGATGATAACAATAACAACGACGACAGTAGCAGCAGCAGCAACAACAATAGCAACAACAACATCAGCATCAACAACAACGCGGCGCACCCACTCGTAGAGGCTCACCGACGAGTGAGAATCAACGAGTTGAACCAGCAACACAACCAACTTCTAAGCCAACTAGATGCAGAGAAAGAGAAAGGAAAAGCACTTGAGAAGCTCAAAAAGGTAAGAGGAAATGGGAGAGGTTGGTGGGAAACTCCGACAGAAGAATTGGGAATAGATGAATTGCAGGAAGTGGATGCATCATTTGGAGAAATATATTCAAATGTGTGTCATCAATTGAAACAAAGAGGAGTTATTGGATGTTGTTCTTATAATAATTATAACAACAATATTACTAATTCCCCTATGGGATTTACAACTAATGATCAATTAGGGGAAGAAACAATTCCTTTTACATTTTGGCCGGAAACGTTCCTCCTCCTCTTTTTCCTCCTCCTCCTCCTCCTTATCTTCCTCCTCATCCTCACTTCGATTATGGAGAACAACAACAACAACAACACCATCCTCATCCTCATCCTCATCCTCATCCTCATCCATGAAGTGAAAACGGGGAAGGATCTCACCATCAAATTTGTCGAAGTCTTCGTGTGTTTGGTTTTTATTTCATGTAATAATAATAATGTTGTGTTTTTCTTAATGTGTGTTTGTGTCTTTGATGAAGTCCAGGGTTTCTTTTAG

mRNA sequence

ATGAAGAAGATCGTAAACGAAGACGATCGGTTAATTACATTTTCCAAACGAAGGTCAGGCATATACAAGAAGGCAAGCGAATTAGCTACCTTATGTGGGGCTGAAGTTGGAGTCGTCGTGTTTTCGCCGGCAGGAAAACCGTTCTCGTTTGCACATCCATGCATCGAAACCATCGCAAACAAATTTCTGAATGACAAGAACAAAAACAAGGGAAACAAGGATGATAACAATAACAACGACGACAGTAGCAGCAGCAGCAACAACAATAGCAACAACAACATCAGCATCAACAACAACGCGGCGCACCCACTCGTAGAGGCTCACCGACGAGTGAGAATCAACGAGTTGAACCAGCAACACAACCAACTTCTAAGCCAACTAGATGCAGAGAAAGAGAAAGGAAAAGCACTTGAGAAGCTCAAAAAGGTAAGAGGAAATGGGAGAGGTTGGTGGGAAACTCCGACAGAAGAATTGGGAATAGATGAATTGCAGGAAGTGGATGCATCATTTGGAGAAATATATTCAAATGTGTGTCATCAATTGAAACAAAGAGGAGTTATTGGATGTTGTTCTTATAATAATTATAACAACAATATTACTAATTCCCCTATGGGATTTACAACTAATGATCAATTAGGGGAAGAAACAATTCCTTTTACATTTTGGCCGGAAACGTTCCTCCTCCTCTTTTTCCTCCTCCTCCTCCTCCTTATCTTCCTCCTCATCCTCACTTCGATTATGGAGAACAACAACAACAACAACACCATCCTCATCCTCATCCTCATCCTCATCCTCATCCATGAAGTGAAAACGGGGAAGGATCTCACCATCAAATTTGTCGAAGTCTTCGTGTGTTTGGTTTTTATTTCATGTAATAATAATAATGTTGTGTTTTTCTTAATGTGTGTTTGTGTCTTTGATGAAGTCCAGGGTTTCTTTTAG

Coding sequence (CDS)

ATGAAGAAGATCGTAAACGAAGACGATCGGTTAATTACATTTTCCAAACGAAGGTCAGGCATATACAAGAAGGCAAGCGAATTAGCTACCTTATGTGGGGCTGAAGTTGGAGTCGTCGTGTTTTCGCCGGCAGGAAAACCGTTCTCGTTTGCACATCCATGCATCGAAACCATCGCAAACAAATTTCTGAATGACAAGAACAAAAACAAGGGAAACAAGGATGATAACAATAACAACGACGACAGTAGCAGCAGCAGCAACAACAATAGCAACAACAACATCAGCATCAACAACAACGCGGCGCACCCACTCGTAGAGGCTCACCGACGAGTGAGAATCAACGAGTTGAACCAGCAACACAACCAACTTCTAAGCCAACTAGATGCAGAGAAAGAGAAAGGAAAAGCACTTGAGAAGCTCAAAAAGGTAAGAGGAAATGGGAGAGGTTGGTGGGAAACTCCGACAGAAGAATTGGGAATAGATGAATTGCAGGAAGTGGATGCATCATTTGGAGAAATATATTCAAATGTGTGTCATCAATTGAAACAAAGAGGAGTTATTGGATGTTGTTCTTATAATAATTATAACAACAATATTACTAATTCCCCTATGGGATTTACAACTAATGATCAATTAGGGGAAGAAACAATTCCTTTTACATTTTGGCCGGAAACGTTCCTCCTCCTCTTTTTCCTCCTCCTCCTCCTCCTTATCTTCCTCCTCATCCTCACTTCGATTATGGAGAACAACAACAACAACAACACCATCCTCATCCTCATCCTCATCCTCATCCTCATCCATGAAGTGAAAACGGGGAAGGATCTCACCATCAAATTTGTCGAAGTCTTCGTGTGTTTGGTTTTTATTTCATGTAATAATAATAATGTTGTGTTTTTCTTAATGTGTGTTTGTGTCTTTGATGAAGTCCAGGGTTTCTTTTAG

Protein sequence

MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIANKFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLKKVRGNGRGWWETPTEELGIDELQEVDASFGEIYSNVCHQLKQRGVIGCCSYNNYNNNITNSPMGFTTNDQLGEETIPFTFWPETFLLLFFLLLLLLIFLLILTSIMENNNNNNTILILILILILIHEVKTGKDLTIKFVEVFVCLVFISCNNNNVVFFLMCVCVFDEVQGFF

Homology

[Close]

BLAST of IVF0000143 vs. ExPASy Swiss-Prot
Match: Q4PSU4 (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 7.5e-23
Identity = 66/179 (36.87%), Postives = 101/179 (56.42%), Query Frame = 0


Query: 1   MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN 60
           M KI  E  R +TFSKRR+G++KKASEL TLCGAE+G++VFSPA KPFSF HP +E++ +
Sbjct: 69  MVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPSVESVLD 128

Query: 61  KFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQH 120
           ++++  N +         +  +S                               ELN Q 
Sbjct: 129 RYVSRNNMSLAQSQQLQGSPAASC------------------------------ELNMQL 188

Query: 121 NQLLSQLDAEKEKGKALEKLKK--VRGNGRGWWETPTEELGIDELQEVDASFGEIYSNV 178
             +LS+++ EK+KG+A+E+++K  VR +   WWE P EE+ + +LQE+  +  E+   V
Sbjct: 189 THILSEVEEEKKKGQAMEEMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of IVF0000143 vs. ExPASy Swiss-Prot
Match: Q9FKK2 (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.7e-22
Identity = 63/164 (38.41%), Postives = 91/164 (55.49%), Query Frame = 0


Query: 1   MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN 60
           M K+ NE +  +TFSKRRSG++KKASEL TLCGAEV +VVFSP  K FSF HP ++++ +
Sbjct: 13  MVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPNVDSVID 72

Query: 61  KFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQH 120
           +F+N                          NN +  + +    L E  R   + +LN   
Sbjct: 73  RFIN--------------------------NNPLPPHQHNNMQLRETRRNSIVQDLNNHL 132

Query: 121 NQLLSQLDAEKEKGKALEKLKKVRGNGRGWWETPTEELGIDELQ 165
            Q+LSQL+ EK+K   L+K+++       WWE P EEL + +L+
Sbjct: 133 TQVLSQLETEKKKYDELKKIREKTKALGNWWEDPVEELALSQLE 150

[Close]

BLAST of IVF0000143 vs. ExPASy Swiss-Prot
Match: O64703 (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.8e-16
Identity = 62/190 (32.63%), Postives = 99/190 (52.11%), Query Frame = 0


Query: 1   MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN 60
           M+ + + + R +TFSKRR+G++KKASELATLC AE+G+VVFSP GKPFS+  P ++++A 
Sbjct: 8   MEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPNLDSVAE 67

Query: 61  KFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQH 120
           +F+ +              DDS S     S N                 R ++  L+++ 
Sbjct: 68  RFMRE-------------YDDSDSGDEEKSGN----------------YRPKLKRLSERL 127

Query: 121 NQLLSQLDAEKEKG-KALEKLKKVRGNGRGWWETPTEELGIDELQEVDASFGEIYSNVCH 180
           + L  +++AEKE+G K+ EKL+     G   ++   E L +DEL E       ++  +  
Sbjct: 128 DLLNQEVEAEKERGEKSQEKLESA---GDERFKESIETLTLDELNEYKDRLQTVHGRIEG 165

Query: 181 QLKQRGVIGC 190
           Q+       C
Sbjct: 188 QVNHLQASSC 165

[Close]

BLAST of IVF0000143 vs. ExPASy Swiss-Prot
Match: Q9LMM8 (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.6e-12
Identity = 51/181 (28.18%), Postives = 89/181 (49.17%), Query Frame = 0


Query: 3   KIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIANKF 62
           K+ NE +  +TFSKRRSG++KK SEL TLC AE+ ++VFSP+GK +SF HP +    NK 
Sbjct: 15  KMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSFGHPNV----NKL 74

Query: 63  LNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQHNQ 122
           L                D S      ++N N +          E+  ++RI  LN+   +
Sbjct: 75  L----------------DHSLGRVIRHNNTNFA----------ESRTKLRIQMLNESLTE 134

Query: 123 LLSQLDAEKEKGKALEKLKKVRGNGRGWWETPTEELGIDELQEVDASFGEIYSNVCHQLK 182
           ++++ + E+E  +++ + ++   +   WW     EL + +   +      +   V  ++ 
Sbjct: 135 VMAEKEKEQETKQSIVQNERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVA 165

Query: 183 Q 184
           Q
Sbjct: 195 Q 165

[Close]

BLAST of IVF0000143 vs. ExPASy Swiss-Prot
Match: O80807 (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 6.0e-12
Identity = 59/227 (25.99%), Postives = 105/227 (46.26%), Query Frame = 0


Query: 3   KIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIANKF 62
           K+  E +  +TFSKR++G++KKASE  TLC A++ ++VFSPAGK FSF HP ++ + + F
Sbjct: 15  KMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFSFGHPNVDVLLDHF 74

Query: 63  LNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQHNQ 122
                                   +NN+N            L E++ ++ +  LN+ + +
Sbjct: 75  ------------------RGCVVGHNNTN------------LDESYTKLHVQMLNKSYTE 134

Query: 123 LLSQLDAEKEKGKALEKLKKVRGNGRGWWETPTEELGIDE-------LQEVDASFGEIYS 182
           + ++++ E++  ++  + ++   N   WW     EL + +       L+++     E   
Sbjct: 135 VKAEVEKEQKNKQSRAQNERENENAEEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAI 194

Query: 183 NVCHQLKQRGVIGCCSYNNYNNNITNSPMGFTTN----DQLGEETIP 219
            + HQ      +G  S +N     T S    +TN    DQ G  T P
Sbjct: 195 QLIHQTNPNFYVG--SSSNAAAPATVSGGNISTNQGFFDQNGMTTNP 209

[Close]

BLAST of IVF0000143 vs. ExPASy TrEMBL
Match: A0A0A0KNT7 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G522745 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 5.9e-103
Identity = 200/220 (90.91%), Postives = 208/220 (94.55%), Query Frame = 0


Query: 1   MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN 60
           MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN
Sbjct: 25  MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN 84

Query: 61  KFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQH 120
           KFLN    NKGN DDNNNN DSSSS+NNN+N+N + N+NAAHPLVEAHRRVRINELNQQH
Sbjct: 85  KFLNGNKNNKGNNDDNNNNGDSSSSNNNNNNSNNNNNSNAAHPLVEAHRRVRINELNQQH 144

Query: 121 NQLLSQLDAEKEKGKALEKLKKVRGNGRGWWETPTEELGIDELQEVDASFGEIYSNVCHQ 180
           NQLLSQLDAEKEKGKALEKLK+VRGNGRGWWETPTEELGI+ELQEVDASFGEIYSNVCHQ
Sbjct: 145 NQLLSQLDAEKEKGKALEKLKRVRGNGRGWWETPTEELGIEELQEVDASFGEIYSNVCHQ 204

Query: 181 LKQRGVIGCCSYNNYNNNITNSPMGF-TTNDQLGEETIPF 220
           LKQRGVIGCCSYNNYNNN+ NS MGF  TNDQLGEETIPF
Sbjct: 205 LKQRGVIGCCSYNNYNNNMNNSSMGFPLTNDQLGEETIPF 244

[Close]

BLAST of IVF0000143 vs. ExPASy TrEMBL
Match: A0A5A7UFR8 (Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008890 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 9.1e-88
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN 60
           MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN
Sbjct: 25  MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN 84

Query: 61  KFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQH 120
           KFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQH
Sbjct: 85  KFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQH 144

Query: 121 NQLLSQLDAEKEKGKALEKLKKVRGNGRGWWETPTEELGIDELQEVDASFGEIYSN 177
           NQLLSQLDAEKEKGKALEKLKKVRGNGRGWWETPTEELGIDELQEVDASFGEIYSN
Sbjct: 145 NQLLSQLDAEKEKGKALEKLKKVRGNGRGWWETPTEELGIDELQEVDASFGEIYSN 200

[Close]

BLAST of IVF0000143 vs. ExPASy TrEMBL
Match: A0A6J1EJ54 (agamous-like MADS-box protein AGL61 OS=Cucurbita moschata OX=3662 GN=LOC111433790 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 7.2e-69
Identity = 152/221 (68.78%), Postives = 167/221 (75.57%), Query Frame = 0


Query: 1   MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN 60
           MKKI NEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIE++AN
Sbjct: 62  MKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIESVAN 121

Query: 61  KFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQH 120
           KFL++      N   N+N                       HPLVEAHRR+RINELNQQH
Sbjct: 122 KFLDE------NPQPNDN----------------------THPLVEAHRRLRINELNQQH 181

Query: 121 NQLLSQLDAEKEKGKALEKLKKVRG-NGRGWWETPTEELGIDELQEVDASFGEIYSNVCH 180
           NQLLSQLDAEKEKGKALEKLKKVRG NGRGWWE+PTEELGI+ELQ+VD S GE+Y NVCH
Sbjct: 182 NQLLSQLDAEKEKGKALEKLKKVRGNNGRGWWESPTEELGIEELQQVDGSLGELYQNVCH 241

Query: 181 QLKQRGVIGCCSYNNYNNNITNSPMGFTTNDQLG-EETIPF 220
           +LK+RGV+G  SY+  N       +GF   D  G EETIPF
Sbjct: 242 ELKERGVLGSSSYSASNT------LGF---DHAGREETIPF 245

[Close]

BLAST of IVF0000143 vs. ExPASy TrEMBL
Match: A0A6J1KP08 (agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111496989 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 3.6e-68
Identity = 151/221 (68.33%), Postives = 166/221 (75.11%), Query Frame = 0


Query: 1   MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN 60
           MKKI NEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIE++AN
Sbjct: 19  MKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIESVAN 78

Query: 61  KFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQH 120
           KFL++      N   N+N                       HPLVEAHRR+RINELNQQH
Sbjct: 79  KFLDE------NPQPNDN----------------------THPLVEAHRRLRINELNQQH 138

Query: 121 NQLLSQLDAEKEKGKALEKLKKVRG-NGRGWWETPTEELGIDELQEVDASFGEIYSNVCH 180
           NQLLSQLDAEKEKGKALEKLKKVRG NGRGWWE+PTEEL I+ELQ+VD S GE+Y NVCH
Sbjct: 139 NQLLSQLDAEKEKGKALEKLKKVRGNNGRGWWESPTEELAIEELQQVDGSLGELYQNVCH 198

Query: 181 QLKQRGVIGCCSYNNYNNNITNSPMGFTTNDQLG-EETIPF 220
           +LK+RGV+G  SY+  N       +GF   D  G EETIPF
Sbjct: 199 ELKERGVLGSSSYSASNT------LGF---DHAGREETIPF 202

[Close]

BLAST of IVF0000143 vs. ExPASy TrEMBL
Match: A0A6J1CYR8 (agamous-like MADS-box protein AGL61 OS=Momordica charantia OX=3673 GN=LOC111015822 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 2.6e-66
Identity = 146/221 (66.06%), Postives = 168/221 (76.02%), Query Frame = 0


Query: 1   MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN 60
           MKKI NEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHP IE++AN
Sbjct: 15  MKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPSIESVAN 74

Query: 61  KFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQH 120
           KF+N+                 +   N+N+           HPLVEAHRRVRINELNQQH
Sbjct: 75  KFINE-----------------TPQPNDNT-----------HPLVEAHRRVRINELNQQH 134

Query: 121 NQLLSQLDAEKEKGKALEKLKKVRG--NGRGWWETPTEELGIDELQEVDASFGEIYSNVC 180
           NQLLSQL+AEKEKGKALEK+KKVRG  NGRGWWETPTEE+G++ELQ+VDAS G++Y+NVC
Sbjct: 135 NQLLSQLEAEKEKGKALEKMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNVC 194

Query: 181 HQLKQRGVIGCCSYNNYNNNITNSPMGFTTNDQLGEETIPF 220
           HQL++RGVIG  S ++Y++   N           GEETIPF
Sbjct: 195 HQLRERGVIGSSS-SSYSSMPFNG---------AGEETIPF 197

[Close]

BLAST of IVF0000143 vs. NCBI nr
Match: XP_011658286.1 (agamous-like MADS-box protein AGL29 [Cucumis sativus])

HSP 1 Score: 383 bits (983), Expect = 1.94e-130
Identity = 200/220 (90.91%), Postives = 208/220 (94.55%), Query Frame = 0


Query: 1   MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN 60
           MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN
Sbjct: 25  MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN 84

Query: 61  KFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQH 120
           KFLN    NKGN DDNNNN DSSSS+NNN+N+N + N+NAAHPLVEAHRRVRINELNQQH
Sbjct: 85  KFLNGNKNNKGNNDDNNNNGDSSSSNNNNNNSNNNNNSNAAHPLVEAHRRVRINELNQQH 144

Query: 121 NQLLSQLDAEKEKGKALEKLKKVRGNGRGWWETPTEELGIDELQEVDASFGEIYSNVCHQ 180
           NQLLSQLDAEKEKGKALEKLK+VRGNGRGWWETPTEELGI+ELQEVDASFGEIYSNVCHQ
Sbjct: 145 NQLLSQLDAEKEKGKALEKLKRVRGNGRGWWETPTEELGIEELQEVDASFGEIYSNVCHQ 204

Query: 181 LKQRGVIGCCSYNNYNNNITNSPMGFT-TNDQLGEETIPF 219
           LKQRGVIGCCSYNNYNNN+ NS MGF  TNDQLGEETIPF
Sbjct: 205 LKQRGVIGCCSYNNYNNNMNNSSMGFPLTNDQLGEETIPF 244

[Close]

BLAST of IVF0000143 vs. NCBI nr
Match: KAA0052555.1 (agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa] >TYK13271.1 agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa])

HSP 1 Score: 332 bits (850), Expect = 1.93e-111
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN 60
           MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN
Sbjct: 25  MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN 84

Query: 61  KFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQH 120
           KFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQH
Sbjct: 85  KFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQH 144

Query: 121 NQLLSQLDAEKEKGKALEKLKKVRGNGRGWWETPTEELGIDELQEVDASFGEIYSN 176
           NQLLSQLDAEKEKGKALEKLKKVRGNGRGWWETPTEELGIDELQEVDASFGEIYSN
Sbjct: 145 NQLLSQLDAEKEKGKALEKLKKVRGNGRGWWETPTEELGIDELQEVDASFGEIYSN 200

[Close]

BLAST of IVF0000143 vs. NCBI nr
Match: XP_038881522.1 (agamous-like MADS-box protein AGL61 [Benincasa hispida])

HSP 1 Score: 325 bits (834), Expect = 5.10e-108
Identity = 177/223 (79.37%), Postives = 196/223 (87.89%), Query Frame = 0


Query: 1   MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN 60
           MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIE++AN
Sbjct: 25  MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIESVAN 84

Query: 61  KFLNDKNKN-KGN---KDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINEL 120
           KFLN+ NKN KGN   KDDNNN+D++++ ++N  NNNI    NA HPLVEAHRRVRINEL
Sbjct: 85  KFLNNDNKNNKGNNNDKDDNNNDDNNNNDNDNPDNNNI----NATHPLVEAHRRVRINEL 144

Query: 121 NQQHNQLLSQLDAEKEKGKALEKLKKVRGNGRGWWETPTEELGIDELQEVDASFGEIYSN 180
           NQQHNQ+LSQLD EKE+GK LE LKKVRGNGRGWWETPTEELGI+EL+EVDASFGE+Y N
Sbjct: 145 NQQHNQILSQLDGEKERGKTLENLKKVRGNGRGWWETPTEELGIEELEEVDASFGELYQN 204

Query: 181 VCHQLKQRGVIGCCSYNNYNNNITNSPMGFTTNDQLGEETIPF 219
           VC QLKQRG+IG CSY +Y+NN   S MGFT N  +GEETIPF
Sbjct: 205 VCDQLKQRGIIGPCSYKHYDNN---SSMGFTIN--VGEETIPF 238

[Close]

BLAST of IVF0000143 vs. NCBI nr
Match: XP_023518350.1 (agamous-like MADS-box protein AGL62 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273 bits (699), Expect = 5.45e-88
Identity = 152/221 (68.78%), Postives = 168/221 (76.02%), Query Frame = 0


Query: 1   MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN 60
           MKKI NEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIE++AN
Sbjct: 19  MKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIESVAN 78

Query: 61  KFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQH 120
           KFL++                           N   N+N  HPLVEAHRR+RINELNQQH
Sbjct: 79  KFLDE---------------------------NPQPNDNT-HPLVEAHRRLRINELNQQH 138

Query: 121 NQLLSQLDAEKEKGKALEKLKKVRGN-GRGWWETPTEELGIDELQEVDASFGEIYSNVCH 180
           NQLLSQLDAEKEKGKALEKLKKVRGN GRGWWE+PTEELGIDELQ+VD S GE+Y NVCH
Sbjct: 139 NQLLSQLDAEKEKGKALEKLKKVRGNNGRGWWESPTEELGIDELQQVDGSLGELYQNVCH 198

Query: 181 QLKQRGVIGCCSYNNYNNNITNSPMGFTTNDQLG-EETIPF 219
           +LK+RGV+G  SY+       ++ +GF   D  G EETIPF
Sbjct: 199 ELKERGVLGSSSYS------ASNTLGF---DHAGREETIPF 202

[Close]

BLAST of IVF0000143 vs. NCBI nr
Match: KAG6594479.1 (Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026476.1 Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 272 bits (695), Expect = 2.13e-87
Identity = 151/221 (68.33%), Postives = 168/221 (76.02%), Query Frame = 0


Query: 1   MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN 60
           MKKI NEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIE++AN
Sbjct: 19  MKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIESVAN 78

Query: 61  KFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQH 120
           KFL++                           N   N+N  HPLVEAHRR+RINELNQQH
Sbjct: 79  KFLDE---------------------------NPQPNDNT-HPLVEAHRRLRINELNQQH 138

Query: 121 NQLLSQLDAEKEKGKALEKLKKVRGN-GRGWWETPTEELGIDELQEVDASFGEIYSNVCH 180
           NQLLSQLDAEKEKGKALEKLKKVRGN GRGWWE+PTEELGI+ELQ+VD S GE+Y NVCH
Sbjct: 139 NQLLSQLDAEKEKGKALEKLKKVRGNNGRGWWESPTEELGIEELQQVDGSLGELYQNVCH 198

Query: 181 QLKQRGVIGCCSYNNYNNNITNSPMGFTTNDQLG-EETIPF 219
           +LK+RGV+G  SY+       ++ +GF   D  G EETIPF
Sbjct: 199 ELKERGVLGSSSYS------ASNTLGF---DHAGREETIPF 202

[Close]

BLAST of IVF0000143 vs. TAIR 10
Match: AT2G24840.1 (AGAMOUS-like 61 )

HSP 1 Score: 109.4 bits (272), Expect = 5.4e-24
Identity = 66/179 (36.87%), Postives = 101/179 (56.42%), Query Frame = 0


Query: 1   MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN 60
           M KI  E  R +TFSKRR+G++KKASEL TLCGAE+G++VFSPA KPFSF HP +E++ +
Sbjct: 69  MVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPSVESVLD 128

Query: 61  KFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQH 120
           ++++  N +         +  +S                               ELN Q 
Sbjct: 129 RYVSRNNMSLAQSQQLQGSPAASC------------------------------ELNMQL 188

Query: 121 NQLLSQLDAEKEKGKALEKLKK--VRGNGRGWWETPTEELGIDELQEVDASFGEIYSNV 178
             +LS+++ EK+KG+A+E+++K  VR +   WWE P EE+ + +LQE+  +  E+   V
Sbjct: 189 THILSEVEEEKKKGQAMEEMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of IVF0000143 vs. TAIR 10
Match: AT5G60440.1 (AGAMOUS-like 62 )

HSP 1 Score: 107.1 bits (266), Expect = 2.7e-23
Identity = 63/164 (38.41%), Postives = 91/164 (55.49%), Query Frame = 0


Query: 1   MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN 60
           M K+ NE +  +TFSKRRSG++KKASEL TLCGAEV +VVFSP  K FSF HP ++++ +
Sbjct: 13  MVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPNVDSVID 72

Query: 61  KFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQH 120
           +F+N                          NN +  + +    L E  R   + +LN   
Sbjct: 73  RFIN--------------------------NNPLPPHQHNNMQLRETRRNSIVQDLNNHL 132

Query: 121 NQLLSQLDAEKEKGKALEKLKKVRGNGRGWWETPTEELGIDELQ 165
            Q+LSQL+ EK+K   L+K+++       WWE P EEL + +L+
Sbjct: 133 TQVLSQLETEKKKYDELKKIREKTKALGNWWEDPVEELALSQLE 150

[Close]

BLAST of IVF0000143 vs. TAIR 10
Match: AT3G04100.1 (AGAMOUS-like 57 )

HSP 1 Score: 98.2 bits (243), Expect = 1.2e-20
Identity = 57/181 (31.49%), Postives = 96/181 (53.04%), Query Frame = 0


Query: 1   MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN 60
           MKK+ N  DR+ITFSKR++GI+KK +EL  +C  EV  ++FS   KP++FAHP ++ +A+
Sbjct: 20  MKKVENYGDRMITFSKRKTGIFKKMNELVAMCDVEVAFLIFSQPKKPYTFAHPSMKKVAD 79

Query: 61  KFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQH 120
           +  N   +    +DD                           PLVEA+++ R+++L ++ 
Sbjct: 80  RLKNPSRQEPLERDD-------------------------TRPLVEAYKKRRLHDLVKKM 139

Query: 121 NQLLSQLDAEKEKGKALEKLKKVRGNGRGWWETPTEELGIDELQEVDASFGEIYSNVCHQ 180
             L  +L  + EK K L++ +  +   + WW  P+E L   ELQ+   +  E+  N+C  
Sbjct: 140 EALEEELAMDLEKLKLLKESRNEKKLDKMWWNFPSEGLSAKELQQRYQAMLELRDNLCDN 175

Query: 181 L 182
           +
Sbjct: 200 M 175

[Close]

BLAST of IVF0000143 vs. TAIR 10
Match: AT4G36590.1 (MADS-box transcription factor family protein )

HSP 1 Score: 89.4 bits (220), Expect = 5.7e-18
Identity = 59/183 (32.24%), Postives = 100/183 (54.64%), Query Frame = 0


Query: 1   MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN 60
           MKK+ NE +  +TFSKRR G++KKASEL TL GAE+ ++VFSP GK FSF HP ++ + +
Sbjct: 13  MKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFSFGHPSVQELIH 72

Query: 61  KFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQH 120
           +F               +N + +S+  ++ NNN+         LVE      I  LN   
Sbjct: 73  RF---------------SNPNHNSAIVHHQNNNLQ--------LVETRPDRNIQYLNNIL 132

Query: 121 NQLLSQLDAEKEKGKALEKLKKVRGNGRGWWETPTEELGIDELQEVDASFGEIYSNVCHQ 180
            ++L+  + EK+K   L+ LK+ R     W+E   ++L ++E  ++ ++  ++   +  +
Sbjct: 133 TEVLANQEKEKQKRMVLDLLKESREQVGNWYEKDVKDLDMNETNQLISALQDVKKKLVRE 172

Query: 181 LKQ 184
           + Q
Sbjct: 193 MSQ 172

[Close]

BLAST of IVF0000143 vs. TAIR 10
Match: AT1G29962.1 (AGAMOUS-like 64 )

HSP 1 Score: 87.4 bits (215), Expect = 2.2e-17
Identity = 61/196 (31.12%), Postives = 105/196 (53.57%), Query Frame = 0


Query: 1   MKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIETIAN 60
           +KKI  ++DRL+T SKRR+GIY K SEL+ LCGAEV  + +S +GKP++F  P  + +A 
Sbjct: 14  IKKIEKDEDRLVTLSKRRNGIYTKLSELSILCGAEVAFLGYSCSGKPYTFGSPSFQAVAE 73

Query: 61  KFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRRVRINELNQQH 120
           +FL               N ++SSSS+++   ++          + AH++ +I EL + +
Sbjct: 74  RFL---------------NGEASSSSSSSLQRSV----------MNAHQQAKIQELCKVY 133

Query: 121 NQLLSQLDAEKEKGKALEKLKKVRG-NGRGWWET-PTEELGIDELQEVDASFGEIYSNVC 180
           N+L+ ++  E+ K K    L ++   N   WW+  P +    +E++++     E+Y  +C
Sbjct: 134 NRLVEEITVEEVKLKKTAALAEMMPMNEDAWWKVDPNDVKDREEVKKMMEKHQELYEKLC 184

Query: 181 HQLKQRGVIGCCSYNN 195
            +   R   G    NN
Sbjct: 194 EEAASRIKRGHDENNN 184

The following BLAST results are available for this feature:

BLAST of IVF0000143 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4PSU4	7.5e-23	36.87	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=...	[more]
Q9FKK2	3.7e-22	38.41	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=...	[more]
O64703	6.8e-16	32.63	Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=...	[more]
Q9LMM8	1.6e-12	28.18	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=...	[more]
O80807	6.0e-12	25.99	Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=...	[more]

BLAST of IVF0000143 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNT7	5.9e-103	90.91	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G522745 PE...	[more]
A0A5A7UFR8	9.1e-88	100.00	Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1EJ54	7.2e-69	68.78	agamous-like MADS-box protein AGL61 OS=Cucurbita moschata OX=3662 GN=LOC11143379...	[more]
A0A6J1KP08	3.6e-68	68.33	agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111496989 ...	[more]
A0A6J1CYR8	2.6e-66	66.06	agamous-like MADS-box protein AGL61 OS=Momordica charantia OX=3673 GN=LOC1110158...	[more]

BLAST of IVF0000143 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658286.1	1.94e-130	90.91	agamous-like MADS-box protein AGL29 [Cucumis sativus]	[more]
KAA0052555.1	1.93e-111	100.00	agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa] >TYK13271.1 agamo...	[more]
XP_038881522.1	5.10e-108	79.37	agamous-like MADS-box protein AGL61 [Benincasa hispida]	[more]
XP_023518350.1	5.45e-88	68.78	agamous-like MADS-box protein AGL62 [Cucurbita pepo subsp. pepo]	[more]
KAG6594479.1	2.13e-87	68.33	Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. soro...	[more]

BLAST of IVF0000143 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24840.1	5.4e-24	36.87	AGAMOUS-like 61	[more]
AT5G60440.1	2.7e-23	38.41	AGAMOUS-like 62	[more]
AT3G04100.1	1.2e-20	31.49	AGAMOUS-like 57	[more]
AT4G36590.1	5.7e-18	32.24	MADS-box transcription factor family protein	[more]
AT1G29962.1	2.2e-17	31.12	AGAMOUS-like 64	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 113..133
None	No IPR available	GENE3D	6.10.140.920		coord: 100..183 e-value: 1.4E-5 score: 27.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..97
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 3..197
None	No IPR available	PANTHER	PTHR11945:SF648	BOX PROTEIN, PUTATIVE-RELATED	coord: 3..197
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 31..52 score: 43.8 coord: 16..31 score: 61.67
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..53 e-value: 2.2E-20 score: 83.7
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 3..50 e-value: 4.1E-22 score: 77.4
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..54 score: 21.151527
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 6..78 e-value: 1.2E-23 score: 84.7
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 1..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0000143.2	IVF0000143.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding