HG10023281 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10023281
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	DUF761 domain-containing protein
Location	Chr05: 32710126 .. 32710377 (-)
RNA-Seq Expression	HG10023281
Synteny	HG10023281

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGAGCTCAGAACCAGCTGTTTCTGCCGCCGGTAAGTGTAAGCAGCAGCCACCGCCATCTCCGTCATCTCCTCGACGGCGCTGCGGCGGAGAGAGGAGGAAATTGGAGAGGACGGTGACGGTGACGGTGACGGAAGACGTTGATGAAAGTGCTGAAGCTTTCATTAAAAAGTTCAGAAATCAATTGTTGATTCAGAGGCTTCAGTCCATTGAAAATTATGAGAAAATGCTGGCTGGAGAAACTTGA

mRNA sequence

ATGAAGAAGAGCTCAGAACCAGCTGTTTCTGCCGCCGGTAAGTGTAAGCAGCAGCCACCGCCATCTCCGTCATCTCCTCGACGGCGCTGCGGCGGAGAGAGGAGGAAATTGGAGAGGACGGTGACGGTGACGGTGACGGAAGACGTTGATGAAAGTGCTGAAGCTTTCATTAAAAAGTTCAGAAATCAATTGTTGATTCAGAGGCTTCAGTCCATTGAAAATTATGAGAAAATGCTGGCTGGAGAAACTTGA

Coding sequence (CDS)

ATGAAGAAGAGCTCAGAACCAGCTGTTTCTGCCGCCGGTAAGTGTAAGCAGCAGCCACCGCCATCTCCGTCATCTCCTCGACGGCGCTGCGGCGGAGAGAGGAGGAAATTGGAGAGGACGGTGACGGTGACGGTGACGGAAGACGTTGATGAAAGTGCTGAAGCTTTCATTAAAAAGTTCAGAAATCAATTGTTGATTCAGAGGCTTCAGTCCATTGAAAATTATGAGAAAATGCTGGCTGGAGAAACTTGA

Protein sequence

MKKSSEPAVSAAGKCKQQPPPSPSSPRRRCGGERRKLERTVTVTVTEDVDESAEAFIKKFRNQLLIQRLQSIENYEKMLAGET

Homology

[Close]

BLAST of HG10023281 vs. NCBI nr
Match: KAA0058765.1 (DUF761 domain-containing protein [Cucumis melo var. makuwa] >TYK10559.1 DUF761 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 129.8 bits (325), Expect = 1.1e-26
Identity = 75/86 (87.21%), Postives = 77/86 (89.53%), Query Frame = 0


Query: 1  MKKSSE-PAVSAA--GKCKQQPPPSPSSPRRRCGGERRKLERTVTVTVTEDVDESAEAFI 60
          MKKSSE P VSAA  G  K QPPPSPSSP R CGGERRKLERTVTVTVTEDVDESAEAFI
Sbjct: 1  MKKSSELPTVSAAAGGINKLQPPPSPSSPLRGCGGERRKLERTVTVTVTEDVDESAEAFI 60

Query: 61 KKFRNQLLIQRLQSIENYEKMLAGET 84
          KKFRNQLLIQRLQSIENYE++LAGET
Sbjct: 61 KKFRNQLLIQRLQSIENYERILAGET 86

[Close]

BLAST of HG10023281 vs. NCBI nr
Match: KGN45285.1 (hypothetical protein Csa_016012 [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 3.3e-23
Identity = 71/85 (83.53%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1   MKKSSE-PAVSAAGKC-KQQPPPSPSSPRRRCGGERRKLERTVTVTVTEDVDESAEAFIK 60
           MKK+SE PAVSAAG   K QPPP PSSP R CGGERRKLER  TVTVTEDV+ESAEAFI+
Sbjct: 19  MKKNSELPAVSAAGGINKLQPPPCPSSPLRFCGGERRKLER--TVTVTEDVNESAEAFIQ 78

Query: 61  KFRNQLLIQRLQSIENYEKMLAGET 84
           KFRNQLLIQRLQSIENYEK+LAGET
Sbjct: 79  KFRNQLLIQRLQSIENYEKILAGET 101

[Close]

BLAST of HG10023281 vs. NCBI nr
Match: KAG6575588.1 (hypothetical protein SDJN03_26227, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014129.1 hypothetical protein SDJN02_24302, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 99.0 bits (245), Expect = 2.1e-17
Identity = 61/89 (68.54%), Postives = 71/89 (79.78%), Query Frame = 0


Query: 1  MKKSSEP----AVSAAGKCKQQPPPSPSSPRRRCGGERRKLER--TVTVTVTEDVDESAE 60
          MK +S+P    A +AAG CKQQ PP P  PR+    ER K+E+  TVTV+VTEDV+ESAE
Sbjct: 1  MKNTSQPPFSAAAAAAGSCKQQQPPPP--PRQ----ERTKMEKTPTVTVSVTEDVNESAE 60

Query: 61 AFIKKFRNQLLIQRLQSIENYEKMLAGET 84
          AFIK+FRNQLLIQRLQSIENYEK+LAGET
Sbjct: 61 AFIKRFRNQLLIQRLQSIENYEKILAGET 83

[Close]

BLAST of HG10023281 vs. NCBI nr
Match: KAB2611398.1 (hypothetical protein D8674_019430 [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 65.5 bits (158), Expect = 2.5e-07
Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = 0


Query: 35 RKLERTVTVTVTEDVDESAEAFIKKFRNQLLIQRLQSIENYEKMLAG 82
          +KLER      TED++ESAEAFIKKFR QLLIQRL+SIENYE+MLAG
Sbjct: 51 KKLER----KSTEDINESAEAFIKKFRKQLLIQRLESIENYEQMLAG 93

[Close]

BLAST of HG10023281 vs. NCBI nr
Match: XP_031388216.1 (pathogen-associated molecular patterns-induced protein A70 [Punica granatum] >OWM78256.1 hypothetical protein CDL15_Pgr015075 [Punica granatum] >PKI40871.1 hypothetical protein CRG98_038712 [Punica granatum])

HSP 1 Score: 64.3 bits (155), Expect = 5.6e-07
Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 0


Query: 18 QPPPSPSSPRRRCGGERRKLERTVTVTVTEDVDESAEAFIKKFRNQLLIQRLQSIENYEK 77
          Q PP+P+S        ++KLER       ED+D SAEAFIKKFR QLL+QRL+SIENYEK
Sbjct: 22 QAPPAPTS-----SAAQKKLER----KPAEDIDASAEAFIKKFRQQLLLQRLESIENYEK 75

Query: 78 MLA 81
          MLA
Sbjct: 82 MLA 75

[Close]

BLAST of HG10023281 vs. ExPASy TrEMBL
Match: A0A5D3CK25 (DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002120 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.3e-27
Identity = 75/86 (87.21%), Postives = 77/86 (89.53%), Query Frame = 0


Query: 1  MKKSSE-PAVSAA--GKCKQQPPPSPSSPRRRCGGERRKLERTVTVTVTEDVDESAEAFI 60
          MKKSSE P VSAA  G  K QPPPSPSSP R CGGERRKLERTVTVTVTEDVDESAEAFI
Sbjct: 1  MKKSSELPTVSAAAGGINKLQPPPSPSSPLRGCGGERRKLERTVTVTVTEDVDESAEAFI 60

Query: 61 KKFRNQLLIQRLQSIENYEKMLAGET 84
          KKFRNQLLIQRLQSIENYE++LAGET
Sbjct: 61 KKFRNQLLIQRLQSIENYERILAGET 86

[Close]

BLAST of HG10023281 vs. ExPASy TrEMBL
Match: A0A0A0K6D1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433160 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-23
Identity = 71/85 (83.53%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1   MKKSSE-PAVSAAGKC-KQQPPPSPSSPRRRCGGERRKLERTVTVTVTEDVDESAEAFIK 60
           MKK+SE PAVSAAG   K QPPP PSSP R CGGERRKLER  TVTVTEDV+ESAEAFI+
Sbjct: 19  MKKNSELPAVSAAGGINKLQPPPCPSSPLRFCGGERRKLER--TVTVTEDVNESAEAFIQ 78

Query: 61  KFRNQLLIQRLQSIENYEKMLAGET 84
           KFRNQLLIQRLQSIENYEK+LAGET
Sbjct: 79  KFRNQLLIQRLQSIENYEKILAGET 101

[Close]

BLAST of HG10023281 vs. ExPASy TrEMBL
Match: A0A5N5G7Z8 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_019430 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.2e-07
Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = 0


Query: 35 RKLERTVTVTVTEDVDESAEAFIKKFRNQLLIQRLQSIENYEKMLAG 82
          +KLER      TED++ESAEAFIKKFR QLLIQRL+SIENYE+MLAG
Sbjct: 51 KKLER----KSTEDINESAEAFIKKFRKQLLIQRLESIENYEQMLAG 93

[Close]

BLAST of HG10023281 vs. ExPASy TrEMBL
Match: A0A218X0F1 (pathogen-associated molecular patterns-induced protein A70 OS=Punica granatum OX=22663 GN=LOC116201215 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.7e-07
Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 0


Query: 18 QPPPSPSSPRRRCGGERRKLERTVTVTVTEDVDESAEAFIKKFRNQLLIQRLQSIENYEK 77
          Q PP+P+S        ++KLER       ED+D SAEAFIKKFR QLL+QRL+SIENYEK
Sbjct: 22 QAPPAPTS-----SAAQKKLER----KPAEDIDASAEAFIKKFRQQLLLQRLESIENYEK 75

Query: 78 MLA 81
          MLA
Sbjct: 82 MLA 75

[Close]

BLAST of HG10023281 vs. ExPASy TrEMBL
Match: A0A1S3ECD8 (Uncharacterized protein OS=Cicer arietinum OX=3827 GN=LOC101507324 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.9e-07
Identity = 41/83 (49.40%), Postives = 53/83 (63.86%), Query Frame = 0


Query: 4   SSEPAVSAAGKCKQQPPPSPSSPR------RRCGGERRKLERTVTVTVTEDVDESAEAFI 63
           SS  + S++      PPPS SSP       ++   + +KLER      +ED++ SA+AFI
Sbjct: 34  SSSSSSSSSSSSSSPPPPSSSSPSSSHEVVKKETNQLKKLER----MPSEDINASADAFI 93

Query: 64  KKFRNQLLIQRLQSIENYEKMLA 81
           K FR QLL+QRLQSIENYEKMLA
Sbjct: 94  KNFRQQLLLQRLQSIENYEKMLA 112

[Close]

BLAST of HG10023281 vs. TAIR 10
Match: AT1G15385.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); Has 6 Blast hits to 6 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 1.3e-06
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 35 RKLERTVTVTVTEDVDESAEAFIKKFRNQLLIQRLQSIEN 75
          +K+ER  ++    DVD+SAEAFI KFRNQLL+QRL+SIEN
Sbjct: 32 KKVERKASM----DVDKSAEAFITKFRNQLLLQRLESIEN 67

The following BLAST results are available for this feature:

BLAST of HG10023281 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0058765.1	1.1e-26	87.21	DUF761 domain-containing protein [Cucumis melo var. makuwa] >TYK10559.1 DUF761 d...	[more]
KGN45285.1	3.3e-23	83.53	hypothetical protein Csa_016012 [Cucumis sativus]	[more]
KAG6575588.1	2.1e-17	68.54	hypothetical protein SDJN03_26227, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAB2611398.1	2.5e-07	74.47	hypothetical protein D8674_019430 [Pyrus ussuriensis x Pyrus communis]	[more]
XP_031388216.1	5.6e-07	60.32	pathogen-associated molecular patterns-induced protein A70 [Punica granatum] >OW...	[more]

BLAST of HG10023281 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10023281 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CK25	5.3e-27	87.21	DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A0A0K6D1	1.6e-23	83.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433160 PE=4 SV=1	[more]
A0A5N5G7Z8	1.2e-07	74.47	Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867...	[more]
A0A218X0F1	2.7e-07	60.32	pathogen-associated molecular patterns-induced protein A70 OS=Punica granatum OX...	[more]
A0A1S3ECD8	7.9e-07	49.40	Uncharacterized protein OS=Cicer arietinum OX=3827 GN=LOC101507324 PE=4 SV=1	[more]

BLAST of HG10023281 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15385.1	1.3e-06	65.00	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761,...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 47..80 e-value: 9.1E-16 score: 57.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR33098	COTTON FIBER (DUF761)	coord: 2..82
None	No IPR available	PANTHER	PTHR33098:SF82	DUF761 DOMAIN PROTEIN	coord: 2..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10023281.1	HG10023281.1	mRNA