HG10023180 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10023180
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr05: 31917987 .. 31918436 (-)
RNA-Seq ExpressionHG10023180
SyntenyHG10023180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAGTGAGAGCATATCTCATAAACACCATTATGATATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGAGCTTCAAAATCTCGCGTCGAACAATGACGATCTTAATGTCGTCGGTAACGGGGATCGATTCGAGAGCCCTACAACAAAAGGGTTTGAGATCAACAACGACCATAAAAGCTTAAAACAACTCATCAATGGCGAAGGGAAAGCGGAAACGAAGTCGGACGAGGGCAACCGAGGAAGGAACTCGCTCGGCCAACACTTTAGTGAAGAAGAGATCAACAATCTTCAAATTGTGAAGAAACAACATCAAGATGGATTACAAGGAGTGAAGCTGAAAAAAGTGGTTGGAAAATTTTTGAGAAACTTGATCAAAGGTGGTGATCAACACCAGCTGATGAAGAAGCAAATTAGAAAGAAGTCATTTCTCTGA

mRNA sequence

ATGGGGAGTGAGAGCATATCTCATAAACACCATTATGATATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGAGCTTCAAAATCTCGCGTCGAACAATGACGATCTTAATGTCGTCGGTAACGGGGATCGATTCGAGAGCCCTACAACAAAAGGGTTTGAGATCAACAACGACCATAAAAGCTTAAAACAACTCATCAATGGCGAAGGGAAAGCGGAAACGAAGTCGGACGAGGGCAACCGAGGAAGGAACTCGCTCGGCCAACACTTTAGTGAAGAAGAGATCAACAATCTTCAAATTGTGAAGAAACAACATCAAGATGGATTACAAGGAGTGAAGCTGAAAAAAGTGGTTGGAAAATTTTTGAGAAACTTGATCAAAGGTGGTGATCAACACCAGCTGATGAAGAAGCAAATTAGAAAGAAGTCATTTCTCTGA

Coding sequence (CDS)

ATGGGGAGTGAGAGCATATCTCATAAACACCATTATGATATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGAGCTTCAAAATCTCGCGTCGAACAATGACGATCTTAATGTCGTCGGTAACGGGGATCGATTCGAGAGCCCTACAACAAAAGGGTTTGAGATCAACAACGACCATAAAAGCTTAAAACAACTCATCAATGGCGAAGGGAAAGCGGAAACGAAGTCGGACGAGGGCAACCGAGGAAGGAACTCGCTCGGCCAACACTTTAGTGAAGAAGAGATCAACAATCTTCAAATTGTGAAGAAACAACATCAAGATGGATTACAAGGAGTGAAGCTGAAAAAAGTGGTTGGAAAATTTTTGAGAAACTTGATCAAAGGTGGTGATCAACACCAGCTGATGAAGAAGCAAATTAGAAAGAAGTCATTTCTCTGA

Protein sequence

MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEINNDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSEEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGGDQHQLMKKQIRKKSFL
Homology
BLAST of HG10023180 vs. NCBI nr
Match: XP_038896195.1 (uncharacterized protein LOC120084478 [Benincasa hispida])

HSP 1 Score: 263.8 bits (673), Expect = 8.7e-67
Identity = 137/150 (91.33%), Postives = 141/150 (94.00%), Query Frame = 0

Query: 1   MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEIN 60
           MGSESISHKHHYDISMSKRTRKPAKIQDELQNLA NNDDLNV+G GDRFESP TKGFEI 
Sbjct: 1   MGSESISHKHHYDISMSKRTRKPAKIQDELQNLALNNDDLNVIGEGDRFESPATKGFEIE 60

Query: 61  NDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSEEEINNLQIVKKQHQDGLQGVKLKK 120
           ND KSL+QLINGEGK ET+SDEGNRGRNSLGQHFS+EEINNLQIVKKQHQDGLQGVKLKK
Sbjct: 61  NDRKSLEQLINGEGKEETRSDEGNRGRNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKK 120

Query: 121 VVGKFLRNLIK-GGDQHQLMKKQIRKKSFL 150
           VVGKFLRNLIK GGDQHQLMKK IRKK FL
Sbjct: 121 VVGKFLRNLIKGGGDQHQLMKKPIRKKPFL 150

BLAST of HG10023180 vs. NCBI nr
Match: KAE8646415.1 (hypothetical protein Csa_016003 [Cucumis sativus])

HSP 1 Score: 224.2 bits (570), Expect = 7.6e-55
Identity = 123/152 (80.92%), Postives = 131/152 (86.18%), Query Frame = 0

Query: 1   MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEIN 60
           MGSESISHK HYDISMSKRTRKPAKIQDELQ L +N+DDL ++G GD+         EIN
Sbjct: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQ--------SEIN 60

Query: 61  NDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSEEEINNLQIVKKQHQDGLQGVKLKK 120
           NDHKSLKQLI+GEGKAE +SDEGNR RNSLGQHFS+EEINNLQIVKKQHQDGLQGVKLKK
Sbjct: 61  NDHKSLKQLISGEGKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKK 120

Query: 121 VVGKFLRNLIKGG---DQHQLMKKQIRKKSFL 150
           VVGKFLRNLIKGG    QHQLMKK IRKKSFL
Sbjct: 121 VVGKFLRNLIKGGGDHHQHQLMKKPIRKKSFL 144

BLAST of HG10023180 vs. NCBI nr
Match: XP_011659480.2 (uncharacterized protein LOC105436185 [Cucumis sativus])

HSP 1 Score: 224.2 bits (570), Expect = 7.6e-55
Identity = 123/152 (80.92%), Postives = 131/152 (86.18%), Query Frame = 0

Query: 1   MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEIN 60
           MGSESISHK HYDISMSKRTRKPAKIQDELQ L +N+DDL ++G GD+         EIN
Sbjct: 22  MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQ--------SEIN 81

Query: 61  NDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSEEEINNLQIVKKQHQDGLQGVKLKK 120
           NDHKSLKQLI+GEGKAE +SDEGNR RNSLGQHFS+EEINNLQIVKKQHQDGLQGVKLKK
Sbjct: 82  NDHKSLKQLISGEGKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKK 141

Query: 121 VVGKFLRNLIKGG---DQHQLMKKQIRKKSFL 150
           VVGKFLRNLIKGG    QHQLMKK IRKKSFL
Sbjct: 142 VVGKFLRNLIKGGGDHHQHQLMKKPIRKKSFL 165

BLAST of HG10023180 vs. NCBI nr
Match: XP_008461224.1 (PREDICTED: uncharacterized protein LOC103499874 [Cucumis melo] >KAA0058672.1 uncharacterized protein E6C27_scaffold339G001420 [Cucumis melo var. makuwa] >TYK10479.1 uncharacterized protein E5676_scaffold459G001280 [Cucumis melo var. makuwa])

HSP 1 Score: 221.1 bits (562), Expect = 6.5e-54
Identity = 121/151 (80.13%), Postives = 128/151 (84.77%), Query Frame = 0

Query: 1   MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEIN 60
           MGSESISHK HYDISMSKRTRKPAKIQDELQN  S +D L+++  GDR ES        N
Sbjct: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQNFTSKDDGLSIIDKGDRSES--------N 60

Query: 61  NDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSEEEINNLQIVKKQHQDGLQGVKLKK 120
           NDHKSLKQLI+GEGKAET+ DEGNR RNSLGQHFS+EEINNLQIVKKQHQDGLQGVKLKK
Sbjct: 61  NDHKSLKQLISGEGKAETRLDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKK 120

Query: 121 VVGKFLRNLIKGG--DQHQLMKKQIRKKSFL 150
           VVGKFLRNLIKGG   QHQLMKK  RKKSFL
Sbjct: 121 VVGKFLRNLIKGGGDHQHQLMKKPTRKKSFL 143

BLAST of HG10023180 vs. NCBI nr
Match: XP_023004344.1 (uncharacterized protein LOC111497689 [Cucurbita maxima])

HSP 1 Score: 210.3 bits (534), Expect = 1.1e-50
Identity = 120/152 (78.95%), Postives = 133/152 (87.50%), Query Frame = 0

Query: 1   MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEIN 60
           M SESISHKH+YDISMSKRTRKPAKIQDELQNL  NN+DLN V N D+F SPTTKGFE N
Sbjct: 11  MESESISHKHYYDISMSKRTRKPAKIQDELQNLTPNNEDLN-VDNRDQFGSPTTKGFE-N 70

Query: 61  NDHKSLKQLINGEGKAETK--SDEGNRGRNSLGQHFSEEEIN-NLQIVKKQHQDGLQGVK 120
           N+HKSLKQL+N E KAET+   DEG+RGRNSLGQHFS+EE+N NLQIVKKQH+DGLQGVK
Sbjct: 71  NEHKSLKQLMNEEEKAETRLGEDEGSRGRNSLGQHFSKEEMNKNLQIVKKQHRDGLQGVK 130

Query: 121 LKKVVGKFLRNLIKGGDQHQLMKKQIRKKSFL 150
           LKKVVG FLR+LIKGGD+HQL  K+  KKSFL
Sbjct: 131 LKKVVGNFLRSLIKGGDKHQL--KKPTKKSFL 158

BLAST of HG10023180 vs. ExPASy TrEMBL
Match: A0A0A0KBK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G430160 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.7e-55
Identity = 123/152 (80.92%), Postives = 131/152 (86.18%), Query Frame = 0

Query: 1   MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEIN 60
           MGSESISHK HYDISMSKRTRKPAKIQDELQ L +N+DDL ++G GD+         EIN
Sbjct: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQ--------SEIN 60

Query: 61  NDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSEEEINNLQIVKKQHQDGLQGVKLKK 120
           NDHKSLKQLI+GEGKAE +SDEGNR RNSLGQHFS+EEINNLQIVKKQHQDGLQGVKLKK
Sbjct: 61  NDHKSLKQLISGEGKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKK 120

Query: 121 VVGKFLRNLIKGG---DQHQLMKKQIRKKSFL 150
           VVGKFLRNLIKGG    QHQLMKK IRKKSFL
Sbjct: 121 VVGKFLRNLIKGGGDHHQHQLMKKPIRKKSFL 144

BLAST of HG10023180 vs. ExPASy TrEMBL
Match: A0A5A7US55 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001280 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.1e-54
Identity = 121/151 (80.13%), Postives = 128/151 (84.77%), Query Frame = 0

Query: 1   MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEIN 60
           MGSESISHK HYDISMSKRTRKPAKIQDELQN  S +D L+++  GDR ES        N
Sbjct: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQNFTSKDDGLSIIDKGDRSES--------N 60

Query: 61  NDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSEEEINNLQIVKKQHQDGLQGVKLKK 120
           NDHKSLKQLI+GEGKAET+ DEGNR RNSLGQHFS+EEINNLQIVKKQHQDGLQGVKLKK
Sbjct: 61  NDHKSLKQLISGEGKAETRLDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKK 120

Query: 121 VVGKFLRNLIKGG--DQHQLMKKQIRKKSFL 150
           VVGKFLRNLIKGG   QHQLMKK  RKKSFL
Sbjct: 121 VVGKFLRNLIKGGGDHQHQLMKKPTRKKSFL 143

BLAST of HG10023180 vs. ExPASy TrEMBL
Match: A0A1S3CFF2 (uncharacterized protein LOC103499874 OS=Cucumis melo OX=3656 GN=LOC103499874 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.1e-54
Identity = 121/151 (80.13%), Postives = 128/151 (84.77%), Query Frame = 0

Query: 1   MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEIN 60
           MGSESISHK HYDISMSKRTRKPAKIQDELQN  S +D L+++  GDR ES        N
Sbjct: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQNFTSKDDGLSIIDKGDRSES--------N 60

Query: 61  NDHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSEEEINNLQIVKKQHQDGLQGVKLKK 120
           NDHKSLKQLI+GEGKAET+ DEGNR RNSLGQHFS+EEINNLQIVKKQHQDGLQGVKLKK
Sbjct: 61  NDHKSLKQLISGEGKAETRLDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKK 120

Query: 121 VVGKFLRNLIKGG--DQHQLMKKQIRKKSFL 150
           VVGKFLRNLIKGG   QHQLMKK  RKKSFL
Sbjct: 121 VVGKFLRNLIKGGGDHQHQLMKKPTRKKSFL 143

BLAST of HG10023180 vs. ExPASy TrEMBL
Match: A0A6J1KW04 (uncharacterized protein LOC111497689 OS=Cucurbita maxima OX=3661 GN=LOC111497689 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 5.5e-51
Identity = 120/152 (78.95%), Postives = 133/152 (87.50%), Query Frame = 0

Query: 1   MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEIN 60
           M SESISHKH+YDISMSKRTRKPAKIQDELQNL  NN+DLN V N D+F SPTTKGFE N
Sbjct: 11  MESESISHKHYYDISMSKRTRKPAKIQDELQNLTPNNEDLN-VDNRDQFGSPTTKGFE-N 70

Query: 61  NDHKSLKQLINGEGKAETK--SDEGNRGRNSLGQHFSEEEIN-NLQIVKKQHQDGLQGVK 120
           N+HKSLKQL+N E KAET+   DEG+RGRNSLGQHFS+EE+N NLQIVKKQH+DGLQGVK
Sbjct: 71  NEHKSLKQLMNEEEKAETRLGEDEGSRGRNSLGQHFSKEEMNKNLQIVKKQHRDGLQGVK 130

Query: 121 LKKVVGKFLRNLIKGGDQHQLMKKQIRKKSFL 150
           LKKVVG FLR+LIKGGD+HQL  K+  KKSFL
Sbjct: 131 LKKVVGNFLRSLIKGGDKHQL--KKPTKKSFL 158

BLAST of HG10023180 vs. ExPASy TrEMBL
Match: A0A6J1H8U7 (uncharacterized protein LOC111460691 OS=Cucurbita moschata OX=3662 GN=LOC111460691 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.1e-50
Identity = 116/143 (81.12%), Postives = 126/143 (88.11%), Query Frame = 0

Query: 1   MGSESISHKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEIN 60
           M SESISHKH+YDISMSKRTRKPAKIQDELQNL  NN+DLN V N DRF SPTTKGFE N
Sbjct: 11  MESESISHKHYYDISMSKRTRKPAKIQDELQNLTPNNEDLN-VDNRDRFGSPTTKGFE-N 70

Query: 61  NDHKSLKQLINGEGKAETK--SDEGNRGRNSLGQHFSEEEIN-NLQIVKKQHQDGLQGVK 120
           N+HKSLKQL+N E KAET+   DEG RGRNSLGQHFS+EE+N NLQIVKKQH+DGLQGVK
Sbjct: 71  NEHKSLKQLMNEEEKAETRLGEDEGGRGRNSLGQHFSKEEMNKNLQIVKKQHRDGLQGVK 130

Query: 121 LKKVVGKFLRNLIKGGDQHQLMK 141
           LKKVVG FLR+LIKGGD+HQL K
Sbjct: 131 LKKVVGNFLRSLIKGGDKHQLKK 151

BLAST of HG10023180 vs. TAIR 10
Match: AT2G31930.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 6.5e-04
Identity = 45/146 (30.82%), Postives = 74/146 (50.68%), Query Frame = 0

Query: 1   MGSESIS-HKHHYDISMSKRTRKPAKIQDELQNLASNNDDLNVVGNGDRFESPTTKGFEI 60
           MGSE ++  K  +D+SMSKRTRKP        +   N+   + +        P  +  +I
Sbjct: 1   MGSEVVNPTKPRFDLSMSKRTRKP-------WSSLINDMHHHAICTQSSQPKPDKEQEQI 60

Query: 61  NN---DHKSLKQLINGEGKAETKSDEGNRGRNSLGQHFSEEE--INNLQIVKKQHQDGLQ 120
            +   D KSL  L+  + K   ++D  N  ++SL QHF + E     +Q+V K+ + G  
Sbjct: 61  EDKEIDRKSLNNLMRCDEKLNGEADVNN--KSSLDQHFEDGEGIKPTMQLVVKKEKQG-- 120

Query: 121 GVKLKKVVGKFLR---NLIKGGDQHQ 138
           G+K K +VG++++    LIK    H+
Sbjct: 121 GLKFKGMVGRYVKVWSGLIKAKRDHK 135

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038896195.18.7e-6791.33uncharacterized protein LOC120084478 [Benincasa hispida][more]
KAE8646415.17.6e-5580.92hypothetical protein Csa_016003 [Cucumis sativus][more]
XP_011659480.27.6e-5580.92uncharacterized protein LOC105436185 [Cucumis sativus][more]
XP_008461224.16.5e-5480.13PREDICTED: uncharacterized protein LOC103499874 [Cucumis melo] >KAA0058672.1 unc... [more]
XP_023004344.11.1e-5078.95uncharacterized protein LOC111497689 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KBK83.7e-5580.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G430160 PE=4 SV=1[more]
A0A5A7US553.1e-5480.13Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CFF23.1e-5480.13uncharacterized protein LOC103499874 OS=Cucumis melo OX=3656 GN=LOC103499874 PE=... [more]
A0A6J1KW045.5e-5178.95uncharacterized protein LOC111497689 OS=Cucurbita maxima OX=3661 GN=LOC111497689... [more]
A0A6J1H8U72.1e-5081.12uncharacterized protein LOC111460691 OS=Cucurbita moschata OX=3662 GN=LOC1114606... [more]
Match NameE-valueIdentityDescription
AT2G31930.16.5e-0430.82unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10023180.1HG10023180.1mRNA