HG10023178 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10023178
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Location	Chr05: 31902892 .. 31904518 (+)
RNA-Seq Expression	HG10023178
Synteny	HG10023178

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGATTTCATTTGACTTGGAAATGGATTTTGTTAACGCTGCTGCTAACCTCACCGACGGTGAGCTTTGTAGGTGGAGATGATGAGAAAGACAAAGAGGAATGCACGCAGCAATTGGCTGGGATGGCCACATGTCTGCCGTATGTGAGCGGTGATGCAAAGGCTCCGACGCCTGACTGTTGCACTGGACTGAAGGAAGTGCTTAAGAACAACAAGAAATGCTTATGCGTTATAGTAAAAGACCGAAATGACCCTGACTTGGGGCTTCAGATAAATGTCACACTGGCCTTGGGCCTGCCTGATACTTGCCATGCCACTGCCAATGTCTCCAATTGTCCAGGTAAATTCAAGATAAAGTTTATCCGTGATAGATTTCTATCGCTGATAGACCACCTAGACCATAAAAATCTATCATTGATAAACTTTGTTATATTTATAATTTTTTTTTTAAAATGTTGCTATATATGCTAATACTTTGAATCTGATTGTTATATATGCAACTGTCCCTAATCAAATTTTACATGATTTTATTTTATTTGTTTTGGTTAGATATATGTTTTAGTCCTTAAAGTTTAAGTTTTTTGATTTATTTTTTTAGTCCCTATCATTTACAATGTTTAGATTTAGTTTTGTATGTACATGTCTAACTAGGCGCTTGAAGTGGAAAGGAGTGGAGTTGTTTAGTATGAAAAATTGTTTGATAGTAGTTAATAAGTCATGAAATTGATATTTTTTTAGTTATGGGACCCATAAACTCTTTGGGGGCATGTCTTGAGAATTCCGCCTCTCATCGATGAAAGTTTAAATTGGCTGATAACAAGTTGACAAAATATAATGTTCAGTAAATTGACACAATAAAGATTAAAAAAAAAAAAAATCATCAACTAGATGAAAGTTTGAAAATTTCTACCGAATTCTTAAAAGTTTGGAGGAATTAAGAAACTCTTATCTCTCATATTCTTTAGACGAAGAATTAGAACTTGAGATGTTGGTTAATGATAACTATACATTGCATAATCTTAAGCTTAACATTAGTTAATCTAACAATCACTCATATGAAAGATATAATTGGAAAATATGAAAAGTGTGGGTTTAAATTGTAACACATTCAAGTTTAAGGATTAAATAAAAGTATATAGACTAAATTGTTACAAATCAAATATAGAGATTAAATTGTTACTTTTACGAAAGTTTGAGACTAAAAATGATTCTTAACCAACGTATATAAATGGAGTTGATGCAGCTCTTTTAAACTTGCCACCCAATTCAGCAGAGGCTCAAGTTTTCTATCAATTGGGCAAGGGAAATAGCTCCTCTGCTGTAGCAGCTGCAGCGCCCATAAGCCCTTCTCCTACCATTAATTCCACAGGTAATTTGGCTCTTTCAATTAATTTTATTTATTATTATAATAATAAAGTTTGGAAAAGAAATTTATGGTCATTAATGGTTTTTTTATTTTTATTTTTTATTCTTCTTCTTCACCAAAATTGCAGTTGGAGGGGGAAGTAGAATTGGGCAAGAGAAGGGTGAAGCTTACAACATAGGAAAGAAATGGCTGCCATTAGAGACTTTGGTTGTTGGAGCTCTATTGCTTTTGTTTTGGTTGGACTCATACCATGTTTAG

mRNA sequence

ATGGAGGGATTTCATTTGACTTGGAAATGGATTTTGTTAACGCTGCTGCTAACCTCACCGACGGTGAGCTTTGTAGGTGGAGATGATGAGAAAGACAAAGAGGAATGCACGCAGCAATTGGCTGGGATGGCCACATGTCTGCCGTATGTGAGCGGTGATGCAAAGGCTCCGACGCCTGACTGTTGCACTGGACTGAAGGAAGTGCTTAAGAACAACAAGAAATGCTTATGCGTTATAGTAAAAGACCGAAATGACCCTGACTTGGGGCTTCAGATAAATGTCACACTGGCCTTGGGCCTGCCTGATACTTGCCATGCCACTGCCAATGTCTCCAATTCTCTTTTAAACTTGCCACCCAATTCAGCAGAGGCTCAAGTTTTCTATCAATTGGGCAAGGGAAATAGCTCCTCTGCTGTAGCAGCTGCAGCGCCCATAAGCCCTTCTCCTACCATTAATTCCACAGTTGGAGGGGGAAGTAGAATTGGGCAAGAGAAGGGTGAAGCTTACAACATAGGAAAGAAATGGCTGCCATTAGAGACTTTGGTTGTTGGAGCTCTATTGCTTTTGTTTTGGTTGGACTCATACCATGTTTAG

Coding sequence (CDS)

ATGGAGGGATTTCATTTGACTTGGAAATGGATTTTGTTAACGCTGCTGCTAACCTCACCGACGGTGAGCTTTGTAGGTGGAGATGATGAGAAAGACAAAGAGGAATGCACGCAGCAATTGGCTGGGATGGCCACATGTCTGCCGTATGTGAGCGGTGATGCAAAGGCTCCGACGCCTGACTGTTGCACTGGACTGAAGGAAGTGCTTAAGAACAACAAGAAATGCTTATGCGTTATAGTAAAAGACCGAAATGACCCTGACTTGGGGCTTCAGATAAATGTCACACTGGCCTTGGGCCTGCCTGATACTTGCCATGCCACTGCCAATGTCTCCAATTCTCTTTTAAACTTGCCACCCAATTCAGCAGAGGCTCAAGTTTTCTATCAATTGGGCAAGGGAAATAGCTCCTCTGCTGTAGCAGCTGCAGCGCCCATAAGCCCTTCTCCTACCATTAATTCCACAGTTGGAGGGGGAAGTAGAATTGGGCAAGAGAAGGGTGAAGCTTACAACATAGGAAAGAAATGGCTGCCATTAGAGACTTTGGTTGTTGGAGCTCTATTGCTTTTGTTTTGGTTGGACTCATACCATGTTTAG

Protein sequence

MEGFHLTWKWILLTLLLTSPTVSFVGGDDEKDKEECTQQLAGMATCLPYVSGDAKAPTPDCCTGLKEVLKNNKKCLCVIVKDRNDPDLGLQINVTLALGLPDTCHATANVSNSLLNLPPNSAEAQVFYQLGKGNSSSAVAAAAPISPSPTINSTVGGGSRIGQEKGEAYNIGKKWLPLETLVVGALLLLFWLDSYHV

Homology

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BLAST of HG10023178 vs. NCBI nr
Match: XP_038899115.1 (non-specific lipid transfer protein GPI-anchored 13 [Benincasa hispida])

HSP 1 Score: 374.4 bits (960), Expect = 6.0e-100
Identity = 182/199 (91.46%), Postives = 188/199 (94.47%), Query Frame = 0


Query: 1   MEGFHLTWKWILLTLLLTSPTVSFVGGDDEKDKEECTQQLAGMATCLPYVSGDAKAPTPD 60
           MEGFH TWKW+LLTLLLTSPTVSFVGGDDEKDKEECTQQLAGMATCLPYVSG AKAPTPD
Sbjct: 1   MEGFHFTWKWLLLTLLLTSPTVSFVGGDDEKDKEECTQQLAGMATCLPYVSGGAKAPTPD 60

Query: 61  CCTGLKEVLKNNKKCLCVIVKDRNDPDLGLQINVTLALGLPDTCHATANVSN--SLLNLP 120
           CC+GLKEVLKNNKKCLCVI+KDRNDPDLGLQINVTLALGLPD CHATANVSN  +LLNLP
Sbjct: 61  CCSGLKEVLKNNKKCLCVIIKDRNDPDLGLQINVTLALGLPDICHATANVSNCPALLNLP 120

Query: 121 PNSAEAQVFYQLGKGNSSSAVAAAAPISPSPTINSTVGGGSRIGQEKGEAYNIGKKWLPL 180
           PNSAEAQVFYQLGKGNSSS+  A APISPSPTINSTVGGGSRIG +KG AYNIGKKWLPL
Sbjct: 121 PNSAEAQVFYQLGKGNSSSSAVAPAPISPSPTINSTVGGGSRIGPDKGGAYNIGKKWLPL 180

Query: 181 ETLVVGALLLLFWLDSYHV 198
           ETL VGALLLLFWLDSYHV
Sbjct: 181 ETLAVGALLLLFWLDSYHV 199

[Close]

BLAST of HG10023178 vs. NCBI nr
Match: XP_022150545.1 (protein YLS3-like [Momordica charantia])

HSP 1 Score: 309.7 bits (792), Expect = 1.8e-80
Identity = 160/197 (81.22%), Postives = 170/197 (86.29%), Query Frame = 0


Query: 4   FHLTWKWILLTLLLTSPTVSFVGGDDEKDKEECTQQLAGMATCLPYVSGDAKAPTPDCCT 63
           FH  +K +LLTLLLTSP V  V  D EKDKEECTQQLAGMATCLPYVSGDAK+PTPDCC 
Sbjct: 3   FHFAFKLLLLTLLLTSPAVRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDCCN 62

Query: 64  GLKEVLKNNKKCLCVIVKDRNDPDLGLQINVTLALGLPDTCHATANVSN--SLLNLPPNS 123
           GLKEVLK+NKKCLCVIVKDRNDPDLGLQINVTLALGLPD+CHA+ANVSN  +LLNLPPNS
Sbjct: 63  GLKEVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPPNS 122

Query: 124 AEAQVFYQLGKGNSSSAVA-AAAPISPSPTINSTVGGGSRIGQEKGEAYNIGKKWLPLET 183
            EAQVFYQLGK NSSSA A AAAPISPS T NSTVGGGSRIG +KGEA   G KWLPLE 
Sbjct: 123 PEAQVFYQLGKSNSSSAAASAAAPISPSSTTNSTVGGGSRIGPDKGEACYRGNKWLPLEN 182

Query: 184 LVVGALLLLFWLDSYHV 198
           LV GALLL F+LDS +V
Sbjct: 183 LVFGALLLCFFLDSLYV 199

[Close]

BLAST of HG10023178 vs. NCBI nr
Match: KAG6593339.1 (Protein YLS3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025687.1 Protein YLS3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 309.7 bits (792), Expect = 1.8e-80
Identity = 159/197 (80.71%), Postives = 169/197 (85.79%), Query Frame = 0


Query: 3   GFHLTWKWILLTLLLTSPTVSFVGGDDEKDKEECTQQLAGMATCLPYVSGDAKAPTPDCC 62
           GFH   KW+LL LLL SP VSF+ GD EKD+EECTQQLAGMATCL YVSGDAKAPTPDCC
Sbjct: 2   GFHFGCKWLLLALLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDCC 61

Query: 63  TGLKEVLKNNKKCLCVIVKDRNDPDLGLQINVTLALGLPDTCHATANVSN--SLLNLPPN 122
           +GLK VLK+NKKCLCVIVKDRNDPDLGLQINVTLALGLPD CHA ANVSN  +LLNLPP+
Sbjct: 62  SGLKGVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSNCPALLNLPPS 121

Query: 123 SAEAQVFYQLGKGNSSSAVAAAAPISPSPTINSTVGGGSRIGQEKGEAYNIGKKWLPLET 182
           S EAQVFYQ GK  SSS  AAAAPISPSP INST GGGSR G +KGEAY IG KWLPL+T
Sbjct: 122 SPEAQVFYQFGKAQSSS--AAAAPISPSPAINST-GGGSRNGTDKGEAYTIGNKWLPLKT 181

Query: 183 LVVGALLLLFWLDSYHV 198
           LVVGALL+L  LDSYHV
Sbjct: 182 LVVGALLVLSLLDSYHV 195

[Close]

BLAST of HG10023178 vs. NCBI nr
Match: XP_023004343.1 (protein YLS3-like [Cucurbita maxima])

HSP 1 Score: 307.0 bits (785), Expect = 1.2e-79
Identity = 156/197 (79.19%), Postives = 167/197 (84.77%), Query Frame = 0


Query: 3   GFHLTWKWILLTLLLTSPTVSFVGGDDEKDKEECTQQLAGMATCLPYVSGDAKAPTPDCC 62
           GFH   KW+LLTLLL SP VSF+ GD EKD+EECTQQLAGMATCL YVSGDAKAPTPDCC
Sbjct: 2   GFHFGCKWLLLTLLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDCC 61

Query: 63  TGLKEVLKNNKKCLCVIVKDRNDPDLGLQINVTLALGLPDTCHATANVSN--SLLNLPPN 122
           +GLK VLK+NKKCLCVIVKDRNDPDLGLQINVTLALGLPD CHA ANVS   +LLNLPP+
Sbjct: 62  SGLKGVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSTCPALLNLPPS 121

Query: 123 SAEAQVFYQLGKGNSSSAVAAAAPISPSPTINSTVGGGSRIGQEKGEAYNIGKKWLPLET 182
           S EAQVFYQ GK  SSS  AAAAPISPSP INST GGGSR G +KGEAY +G KWLPL+T
Sbjct: 122 SPEAQVFYQFGKAQSSS--AAAAPISPSPAINSTGGGGSRNGTDKGEAYTVGNKWLPLKT 181

Query: 183 LVVGALLLLFWLDSYHV 198
           L VGALL+LF LDS  V
Sbjct: 182 LFVGALLVLFLLDSCRV 196

[Close]

BLAST of HG10023178 vs. NCBI nr
Match: XP_023513729.1 (protein YLS3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307.0 bits (785), Expect = 1.2e-79
Identity = 156/194 (80.41%), Postives = 166/194 (85.57%), Query Frame = 0


Query: 3   GFHLTWKWILLTLLLTSPTVSFVGGDDEKDKEECTQQLAGMATCLPYVSGDAKAPTPDCC 62
           GFH   KW+LL LLL SP VSF+ GD EKD+EECTQQLAGMATCL YVSGDAKAPTPDCC
Sbjct: 2   GFHFGCKWLLLALLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDCC 61

Query: 63  TGLKEVLKNNKKCLCVIVKDRNDPDLGLQINVTLALGLPDTCHATANVSN--SLLNLPPN 122
           +GLK VLK+NKKCLCVIVKDRNDPDLGLQINVTLALGLPD CHA ANVSN  +LLNLPPN
Sbjct: 62  SGLKGVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSNCPALLNLPPN 121

Query: 123 SAEAQVFYQLGKGNSSSAVAAAAPISPSPTINSTVGGGSRIGQEKGEAYNIGKKWLPLET 182
           S EAQVFYQ GK  SSS  AAAAPISPSP INST GGGSR G +KGEAY IG KWLPL++
Sbjct: 122 SPEAQVFYQFGKAQSSS--AAAAPISPSPAINSTGGGGSRNGTDKGEAYTIGNKWLPLKS 181

Query: 183 LVVGALLLLFWLDS 195
           LVV ALL+LF LDS
Sbjct: 182 LVVAALLVLFLLDS 193

[Close]

BLAST of HG10023178 vs. ExPASy Swiss-Prot
Match: O64865 (Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3702 GN=LTPG14 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 7.5e-45
Identity = 101/188 (53.72%), Postives = 126/188 (67.02%), Query Frame = 0


Query: 16  LLTSPTVSFVGGDDEKDKEECTQQLAGMATCLPYVSGDAKAPTPDCCTGLKEVLKNNKKC 75
           L+    V     D  KDKEECT+QL GMATCLPYV G AK+PTPDCC+GLK+VL +NKKC
Sbjct: 15  LIVVAMVVAAADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVLNSNKKC 74

Query: 76  LCVIVKDRNDPDLGLQINVTLALGLPDTCHATANVSN--SLLNLPPNSAEAQVFYQLGKG 135
           LCVI++DRNDPDLGLQINV+LAL LP  CHA A+V+   +LL+L PNS +AQVFYQL KG
Sbjct: 75  LCVIIQDRNDPDLGLQINVSLALALPSVCHAAADVTKCPALLHLDPNSPDAQVFYQLAKG 134

Query: 136 NSSSAVAAA------APISPSPTINSTVG---GGSRIGQEKGEAYNIGKKWLPLETLVVG 193
            + +  A+A       PIS SPT  S  G   G +     +  A +  K+WL LE  VV 
Sbjct: 135 LNKTGPASAPTGSSPGPISISPTSGSDDGNNSGRTTSVPGRNHAQSFYKQWLGLE--VVF 194

[Close]

BLAST of HG10023178 vs. ExPASy Swiss-Prot
Match: O64864 (Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3702 GN=LTPG13 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.7e-44
Identity = 93/191 (48.69%), Postives = 126/191 (65.97%), Query Frame = 0


Query: 13  LTLLLTSPTVSFVGGDDEKDKEECTQQLAGMATCLPYVSGDAKAPTPDCCTGLKEVLKNN 72
           + L++ +  V   G D  KDKEECT QL GMATCLPYV G AK+PTPDCC+GLK+V+ ++
Sbjct: 13  IALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSD 72

Query: 73  KKCLCVIVKDRNDPDLGLQINVTLALGLPDTCHATANVSN--SLLNLPPNSAEAQVFYQL 132
            KCLC+I+++RNDPDLGLQ+NV+LAL LP  CHATA+++   +LL+L PNS +AQVFYQL
Sbjct: 73  MKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQVFYQL 132

Query: 133 GKGNSSSAVAAAAPISPSPTINSTVGGGSRIGQEKG---------EAYNIGKKWLPLETL 192
            KG + +  A+A   S S   + +   GS  G   G          A +  K+WL LE  
Sbjct: 133 AKGLNETVSASAPTGSASEPTSMSSTPGSSAGNNSGRTTSVPGTNHAQSFSKQWLGLE-- 192

[Close]

BLAST of HG10023178 vs. ExPASy Swiss-Prot
Match: F4I082 (Non-specific lipid transfer protein GPI-anchored 6 OS=Arabidopsis thaliana OX=3702 GN=LTPG6 PE=2 SV=2)

HSP 1 Score: 138.7 bits (348), Expect = 7.3e-32
Identity = 75/185 (40.54%), Postives = 115/185 (62.16%), Query Frame = 0


Query: 11  ILLTLLLTSPTVSFVGGDDEKDKEECTQQLAGMATCLPYVSGDAKAPTPDCCTGLKEVLK 70
           + +T+++TS  + F   D  +D+EECT QL  ++TC+PYV GDAKAPT DCC G  +V++
Sbjct: 8   LFITIVITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIR 67

Query: 71  NNKKCLCVIVKDRNDPDLGLQINVTLALGLPDTCHATA-NVSN--SLLNLPPNSAEAQVF 130
            ++KC+C++V+D++DP LG++IN TLA  LP  CH TA N+++  S+L+LP NS  A+ F
Sbjct: 68  KSEKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKEF 127

Query: 131 YQLGKGNSSSAVAAAAPISPSPT-INSTVGGGSRIGQEKGEAYNIGKKWLPLETLVVGAL 190
             LG+   +         S SPT I+    GG +    K   +   K WL +E L+   +
Sbjct: 128 ENLGRIEDNYN-------STSPTQIHKDGTGGGKAEPVKSNGWK-EKSWLGVELLIYLLV 184

Query: 191 LLLFW 192
            L+F+
Sbjct: 188 SLIFF 184

[Close]

BLAST of HG10023178 vs. ExPASy Swiss-Prot
Match: Q9M2G1 (Non-specific lipid transfer protein GPI-anchored 22 OS=Arabidopsis thaliana OX=3702 GN=LTPG22 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 6.0e-18
Identity = 53/143 (37.06%), Postives = 81/143 (56.64%), Query Frame = 0


Query: 12  LLTLLLTSPTVSFVGGDDE--KDKEECTQQLAGMATCLPYVSGDAKAPTPDCCTGLKEVL 71
           +L L +T   V F+G   E  +D + C   ++ + +CLP+V+  AKAP   CC+ LK  +
Sbjct: 13  MLALCIT-VAVMFLGVRSELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKI 72

Query: 72  K--NNKKCLCVIVKDRNDPDLGLQINVTLALGLPDTCHATANVSN--SLLNLPPNSAEAQ 131
                +KCLC +VKDR+DP LG +++   A+ LP  CH  AN+S    LL+L P+S  +Q
Sbjct: 73  DKGQTRKCLCTLVKDRDDPGLGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDSPASQ 132

Query: 132 VFYQLGKGNSSSAVAAAAPISPS 149
           +F Q  + +S +    A   S S
Sbjct: 133 IFKQFTESSSQTVGHKAVSTSSS 154

[Close]

BLAST of HG10023178 vs. ExPASy Swiss-Prot
Match: Q2PE59 (Non-specific lipid transfer protein GPI-anchored 26 OS=Arabidopsis thaliana OX=3702 GN=LTPG26 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-08
Identity = 26/73 (35.62%), Postives = 40/73 (54.79%), Query Frame = 0


Query: 33  KEECTQQLAGMATCLPYVSGDAKAPTPDCCTGLKEVLKNNKKCLCVIVKDRNDPDLGLQI 92
           +  CT  L  MA CL +++ +   P+  CC  L  V++ + +CLC ++ D     LG+ +
Sbjct: 23  QSSCTNVLISMAPCLSFITQNTSLPSQQCCNQLAHVVRYSSECLCQVL-DGGGSQLGINV 82

Query: 93  NVTLALGLPDTCH 106
           N T AL LP  CH
Sbjct: 83  NETQALALPKACH 94

[Close]

BLAST of HG10023178 vs. ExPASy TrEMBL
Match: A0A6J1D8S3 (protein YLS3-like OS=Momordica charantia OX=3673 GN=LOC111018659 PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 8.8e-81
Identity = 160/197 (81.22%), Postives = 170/197 (86.29%), Query Frame = 0


Query: 4   FHLTWKWILLTLLLTSPTVSFVGGDDEKDKEECTQQLAGMATCLPYVSGDAKAPTPDCCT 63
           FH  +K +LLTLLLTSP V  V  D EKDKEECTQQLAGMATCLPYVSGDAK+PTPDCC 
Sbjct: 3   FHFAFKLLLLTLLLTSPAVRLVTADAEKDKEECTQQLAGMATCLPYVSGDAKSPTPDCCN 62

Query: 64  GLKEVLKNNKKCLCVIVKDRNDPDLGLQINVTLALGLPDTCHATANVSN--SLLNLPPNS 123
           GLKEVLK+NKKCLCVIVKDRNDPDLGLQINVTLALGLPD+CHA+ANVSN  +LLNLPPNS
Sbjct: 63  GLKEVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDSCHASANVSNCPALLNLPPNS 122

Query: 124 AEAQVFYQLGKGNSSSAVA-AAAPISPSPTINSTVGGGSRIGQEKGEAYNIGKKWLPLET 183
            EAQVFYQLGK NSSSA A AAAPISPS T NSTVGGGSRIG +KGEA   G KWLPLE 
Sbjct: 123 PEAQVFYQLGKSNSSSAAASAAAPISPSSTTNSTVGGGSRIGPDKGEACYRGNKWLPLEN 182

Query: 184 LVVGALLLLFWLDSYHV 198
           LV GALLL F+LDS +V
Sbjct: 183 LVFGALLLCFFLDSLYV 199

[Close]

BLAST of HG10023178 vs. ExPASy TrEMBL
Match: A0A6J1KZ76 (protein YLS3-like OS=Cucurbita maxima OX=3661 GN=LOC111497688 PE=3 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 5.7e-80
Identity = 156/197 (79.19%), Postives = 167/197 (84.77%), Query Frame = 0


Query: 3   GFHLTWKWILLTLLLTSPTVSFVGGDDEKDKEECTQQLAGMATCLPYVSGDAKAPTPDCC 62
           GFH   KW+LLTLLL SP VSF+ GD EKD+EECTQQLAGMATCL YVSGDAKAPTPDCC
Sbjct: 2   GFHFGCKWLLLTLLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDCC 61

Query: 63  TGLKEVLKNNKKCLCVIVKDRNDPDLGLQINVTLALGLPDTCHATANVSN--SLLNLPPN 122
           +GLK VLK+NKKCLCVIVKDRNDPDLGLQINVTLALGLPD CHA ANVS   +LLNLPP+
Sbjct: 62  SGLKGVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSTCPALLNLPPS 121

Query: 123 SAEAQVFYQLGKGNSSSAVAAAAPISPSPTINSTVGGGSRIGQEKGEAYNIGKKWLPLET 182
           S EAQVFYQ GK  SSS  AAAAPISPSP INST GGGSR G +KGEAY +G KWLPL+T
Sbjct: 122 SPEAQVFYQFGKAQSSS--AAAAPISPSPAINSTGGGGSRNGTDKGEAYTVGNKWLPLKT 181

Query: 183 LVVGALLLLFWLDSYHV 198
           L VGALL+LF LDS  V
Sbjct: 182 LFVGALLVLFLLDSCRV 196

[Close]

BLAST of HG10023178 vs. ExPASy TrEMBL
Match: A0A6J1H6P3 (protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111460690 PE=3 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.8e-79
Identity = 154/194 (79.38%), Postives = 166/194 (85.57%), Query Frame = 0


Query: 3   GFHLTWKWILLTLLLTSPTVSFVGGDDEKDKEECTQQLAGMATCLPYVSGDAKAPTPDCC 62
           GFH   KW+LL LLL SP VSF+ GD EKD+EECTQQLAGMATCL YVSGDAKAPTPDCC
Sbjct: 2   GFHFACKWLLLALLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDCC 61

Query: 63  TGLKEVLKNNKKCLCVIVKDRNDPDLGLQINVTLALGLPDTCHATANVSN--SLLNLPPN 122
           +GLK VLK+NKKCLCVIVKDRNDPDLGLQINVTLALGLPD CHA ANVSN  +LLNLPP+
Sbjct: 62  SGLKGVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSNCPALLNLPPS 121

Query: 123 SAEAQVFYQLGKGNSSSAVAAAAPISPSPTINSTVGGGSRIGQEKGEAYNIGKKWLPLET 182
           S EAQVFYQ GK  SSS  AAAAPISPSP I+ST GGGSR G +KGEAY IG KWLPL++
Sbjct: 122 SPEAQVFYQFGKAQSSS--AAAAPISPSPAISSTGGGGSRNGTDKGEAYTIGNKWLPLKS 181

Query: 183 LVVGALLLLFWLDS 195
           LVV ALL+LF LDS
Sbjct: 182 LVVAALLVLFLLDS 193

[Close]

BLAST of HG10023178 vs. ExPASy TrEMBL
Match: A0A1S3CDS0 (protein YLS3-like OS=Cucumis melo OX=3656 GN=LOC103499877 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.5e-72
Identity = 151/194 (77.84%), Postives = 160/194 (82.47%), Query Frame = 0


Query: 1   MEGFHLTWKWILLTLLLTSP-TVSFVGGDDEKDKEECTQQLAGMATCLPYVSGDAKAPTP 60
           MEGF L +KW LL LLL SP +V FVGGDD+KDKEECT QLAGMATCLPYVSGDAK PTP
Sbjct: 1   MEGFRLCFKWFLLMLLLRSPSSVRFVGGDDKKDKEECTPQLAGMATCLPYVSGDAKTPTP 60

Query: 61  DCCTGLKEVLKNNKKCLCVIVKDRNDPDLGLQINVTLALGLPDTCHATANVSN--SLLNL 120
           DCC+GLKEVLKNNKKCLCVIVKDRNDPDLGLQINVTLALGLPD CHATANVSN  +LLNL
Sbjct: 61  DCCSGLKEVLKNNKKCLCVIVKDRNDPDLGLQINVTLALGLPDICHATANVSNCPALLNL 120

Query: 121 PPNSAEAQVFYQLGKGNSSSAVAAAAPISPS--PTINSTVGGGSRIGQEKGEAYNIGKKW 180
           P NS+EAQVFYQLGKG SSSA+A A  ISPS   TI+STVGGGS     K   Y IGKKW
Sbjct: 121 PSNSSEAQVFYQLGKGKSSSALAPAPIISPSSPATISSTVGGGS----TKSGGYKIGKKW 180

Query: 181 LPLETLVVGALLLL 190
           +P E LVV   LLL
Sbjct: 181 VPSEILVVVVALLL 190

[Close]

BLAST of HG10023178 vs. ExPASy TrEMBL
Match: A0A0A0K6P6 (Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_7G430130 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.7e-68
Identity = 142/196 (72.45%), Postives = 160/196 (81.63%), Query Frame = 0


Query: 1   MEG---FHLTWKWILLTLLLTSPTVSFVGGDDEKDKEECTQQLAGMATCLPYVSGDAKAP 60
           MEG   F   W W+++ LL +   V FVGGDD+KD+EECT QLAGMATCLPYVSGDAKAP
Sbjct: 1   MEGCRRFSFKWLWLIMLLLRSPSWVRFVGGDDKKDREECTPQLAGMATCLPYVSGDAKAP 60

Query: 61  TPDCCTGLKEVLKNNKKCLCVIVKDRNDPDLGLQINVTLALGLPDTCHATANVSN--SLL 120
           TPDCC+GLKEVL+N+KKCLCVIV+DRNDPDLGLQINVTLAL LPD CHATANVSN  +LL
Sbjct: 61  TPDCCSGLKEVLQNDKKCLCVIVRDRNDPDLGLQINVTLALSLPDICHATANVSNCPALL 120

Query: 121 NLPPNSAEAQVFYQLGKGNSSSAVAAAAPISP--SPTINSTVGGGSRIGQEKGEAYNIGK 180
           N+P NS++AQVFYQLGKG SSSA+A A  +SP  SPTINSTVGGGS+ G E GE Y  GK
Sbjct: 121 NMPSNSSDAQVFYQLGKGKSSSALAPAPMLSPSSSPTINSTVGGGSKSGAE-GEGYKRGK 180

Query: 181 KWLPLETLVVGALLLL 190
           K + LE LVV A LLL
Sbjct: 181 KRVALEILVVVAPLLL 195

[Close]

BLAST of HG10023178 vs. TAIR 10
Match: AT2G44300.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 181.8 bits (460), Expect = 5.3e-46
Identity = 101/188 (53.72%), Postives = 126/188 (67.02%), Query Frame = 0


Query: 16  LLTSPTVSFVGGDDEKDKEECTQQLAGMATCLPYVSGDAKAPTPDCCTGLKEVLKNNKKC 75
           L+    V     D  KDKEECT+QL GMATCLPYV G AK+PTPDCC+GLK+VL +NKKC
Sbjct: 15  LIVVAMVVAAADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVLNSNKKC 74

Query: 76  LCVIVKDRNDPDLGLQINVTLALGLPDTCHATANVSN--SLLNLPPNSAEAQVFYQLGKG 135
           LCVI++DRNDPDLGLQINV+LAL LP  CHA A+V+   +LL+L PNS +AQVFYQL KG
Sbjct: 75  LCVIIQDRNDPDLGLQINVSLALALPSVCHAAADVTKCPALLHLDPNSPDAQVFYQLAKG 134

Query: 136 NSSSAVAAA------APISPSPTINSTVG---GGSRIGQEKGEAYNIGKKWLPLETLVVG 193
            + +  A+A       PIS SPT  S  G   G +     +  A +  K+WL LE  VV 
Sbjct: 135 LNKTGPASAPTGSSPGPISISPTSGSDDGNNSGRTTSVPGRNHAQSFYKQWLGLE--VVF 194

[Close]

BLAST of HG10023178 vs. TAIR 10
Match: AT2G44290.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 179.5 bits (454), Expect = 2.7e-45
Identity = 93/191 (48.69%), Postives = 126/191 (65.97%), Query Frame = 0


Query: 13  LTLLLTSPTVSFVGGDDEKDKEECTQQLAGMATCLPYVSGDAKAPTPDCCTGLKEVLKNN 72
           + L++ +  V   G D  KDKEECT QL GMATCLPYV G AK+PTPDCC+GLK+V+ ++
Sbjct: 13  IALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSD 72

Query: 73  KKCLCVIVKDRNDPDLGLQINVTLALGLPDTCHATANVSN--SLLNLPPNSAEAQVFYQL 132
            KCLC+I+++RNDPDLGLQ+NV+LAL LP  CHATA+++   +LL+L PNS +AQVFYQL
Sbjct: 73  MKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQVFYQL 132

Query: 133 GKGNSSSAVAAAAPISPSPTINSTVGGGSRIGQEKG---------EAYNIGKKWLPLETL 192
            KG + +  A+A   S S   + +   GS  G   G          A +  K+WL LE  
Sbjct: 133 AKGLNETVSASAPTGSASEPTSMSSTPGSSAGNNSGRTTSVPGTNHAQSFSKQWLGLE-- 192

[Close]

BLAST of HG10023178 vs. TAIR 10
Match: AT1G55260.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 138.7 bits (348), Expect = 5.2e-33
Identity = 75/185 (40.54%), Postives = 115/185 (62.16%), Query Frame = 0


Query: 11  ILLTLLLTSPTVSFVGGDDEKDKEECTQQLAGMATCLPYVSGDAKAPTPDCCTGLKEVLK 70
           + +T+++TS  + F   D  +D+EECT QL  ++TC+PYV GDAKAPT DCC G  +V++
Sbjct: 51  LFITIVITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIR 110

Query: 71  NNKKCLCVIVKDRNDPDLGLQINVTLALGLPDTCHATA-NVSN--SLLNLPPNSAEAQVF 130
            ++KC+C++V+D++DP LG++IN TLA  LP  CH TA N+++  S+L+LP NS  A+ F
Sbjct: 111 KSEKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKEF 170

Query: 131 YQLGKGNSSSAVAAAAPISPSPT-INSTVGGGSRIGQEKGEAYNIGKKWLPLETLVVGAL 190
             LG+   +         S SPT I+    GG +    K   +   K WL +E L+   +
Sbjct: 171 ENLGRIEDNYN-------STSPTQIHKDGTGGGKAEPVKSNGWK-EKSWLGVELLIYLLV 227

Query: 191 LLLFW 192
            L+F+
Sbjct: 231 SLIFF 227

[Close]

BLAST of HG10023178 vs. TAIR 10
Match: AT1G55260.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 136.3 bits (342), Expect = 2.6e-32
Identity = 74/184 (40.22%), Postives = 113/184 (61.41%), Query Frame = 0


Query: 11  ILLTLLLTSPTVSFVGGDDEKDKEECTQQLAGMATCLPYVSGDAKAPTPDCCTGLKEVLK 70
           + +T+++TS  + F   D  +D+EECT QL  ++TC+PYV GDAKAPT DCC G  +V++
Sbjct: 51  LFITIVITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIR 110

Query: 71  NNKKCLCVIVKDRNDPDLGLQINVTLALGLPDTCHATA-NVSN--SLLNLPPNSAEAQVF 130
            ++KC+C++V+D++DP LG++IN TLA  LP  CH TA N+++  S+L+LP NS  A+ F
Sbjct: 111 KSEKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKEF 170

Query: 131 YQLGKGNSSSAVAAAAPISPSPTINSTVGGGSRIGQEKGEAYNIGKKWLPLETLVVGALL 190
             LG+   +         S SPT      GG +    K   +   K WL +E L+   + 
Sbjct: 171 ENLGRIEDNYN-------STSPT--QIHKGGGKAEPVKSNGWK-EKSWLGVELLIYLLVS 224

Query: 191 LLFW 192
           L+F+
Sbjct: 231 LIFF 224

[Close]

BLAST of HG10023178 vs. TAIR 10
Match: AT3G58550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 92.4 bits (228), Expect = 4.3e-19
Identity = 53/143 (37.06%), Postives = 81/143 (56.64%), Query Frame = 0


Query: 12  LLTLLLTSPTVSFVGGDDE--KDKEECTQQLAGMATCLPYVSGDAKAPTPDCCTGLKEVL 71
           +L L +T   V F+G   E  +D + C   ++ + +CLP+V+  AKAP   CC+ LK  +
Sbjct: 13  MLALCIT-VAVMFLGVRSELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKI 72

Query: 72  K--NNKKCLCVIVKDRNDPDLGLQINVTLALGLPDTCHATANVSN--SLLNLPPNSAEAQ 131
                +KCLC +VKDR+DP LG +++   A+ LP  CH  AN+S    LL+L P+S  +Q
Sbjct: 73  DKGQTRKCLCTLVKDRDDPGLGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDSPASQ 132

Query: 132 VFYQLGKGNSSSAVAAAAPISPS 149
           +F Q  + +S +    A   S S
Sbjct: 133 IFKQFTESSSQTVGHKAVSTSSS 154

The following BLAST results are available for this feature:

BLAST of HG10023178 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899115.1	6.0e-100	91.46	non-specific lipid transfer protein GPI-anchored 13 [Benincasa hispida]	[more]
XP_022150545.1	1.8e-80	81.22	protein YLS3-like [Momordica charantia]	[more]
KAG6593339.1	1.8e-80	80.71	Protein YLS3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025687.1 Prot...	[more]
XP_023004343.1	1.2e-79	79.19	protein YLS3-like [Cucurbita maxima]	[more]
XP_023513729.1	1.2e-79	80.41	protein YLS3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10023178 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64865	7.5e-45	53.72	Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3...	[more]
O64864	3.7e-44	48.69	Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3...	[more]
F4I082	7.3e-32	40.54	Non-specific lipid transfer protein GPI-anchored 6 OS=Arabidopsis thaliana OX=37...	[more]
Q9M2G1	6.0e-18	37.06	Non-specific lipid transfer protein GPI-anchored 22 OS=Arabidopsis thaliana OX=3...	[more]
Q2PE59	1.9e-08	35.62	Non-specific lipid transfer protein GPI-anchored 26 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of HG10023178 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D8S3	8.8e-81	81.22	protein YLS3-like OS=Momordica charantia OX=3673 GN=LOC111018659 PE=3 SV=1	[more]
A0A6J1KZ76	5.7e-80	79.19	protein YLS3-like OS=Cucurbita maxima OX=3661 GN=LOC111497688 PE=3 SV=1	[more]
A0A6J1H6P3	4.8e-79	79.38	protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111460690 PE=3 SV=1	[more]
A0A1S3CDS0	1.5e-72	77.84	protein YLS3-like OS=Cucumis melo OX=3656 GN=LOC103499877 PE=4 SV=1	[more]
A0A0A0K6P6	1.7e-68	72.45	Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_7G430130 P...	[more]

BLAST of HG10023178 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44300.1	5.3e-46	53.72	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G44290.1	2.7e-45	48.69	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G55260.1	5.2e-33	40.54	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G55260.2	2.6e-32	40.22	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G58550.1	4.3e-19	37.06	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 35..51 score: 29.05 coord: 56..70 score: 30.97 coord: 91..108 score: 28.97
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 33..110 e-value: 5.5E-15 score: 57.0
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 35..111
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 29..110 e-value: 5.7E-14 score: 52.0
None	No IPR available	PANTHER	PTHR33044:SF192	PROTEIN YLS3-LIKE ISOFORM X1	coord: 24..188
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 43..105 e-value: 5.15275E-18 score: 72.4594
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 24..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10023178.1	HG10023178.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008643	carbohydrate transport
biological_process	GO:0006869	lipid transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0015293	symporter activity