Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCAATGAAGGAGTCGTTTCCATAGACATGGATATAGAAGCAGGATTGGTAAAAATCAGTGGAGGAAACAACTTGGATCCATCAATCTTTGTAAAAGCAATTGCAAAAGCTGGCAAAAAAGCAAAATTTTCGGCCATGAAGAATACGGCACCGGCACCGATTGGGAAAAGGGCACAATTTCCAGCTGGGGAGAATGCGGCACCGGCACTGATGTCGGTGCCGGCGCCGGAAACCACCATTGACAATGTTTCGAATCATCATAAGAACCCTTCCATTAATTCAGACAATCACTGTTATAAAATTGACAGGACTCAACATGGCAATTCCGGTTCCGGCCATTTTTCCGACCACCATGGCTGGTCCGACAAGGTTCACATCAACGAGGCGGCCGCCGTCAATCCGCCAGTGGCTCTGCCACTTCACAACCAGTTTATGCGACCGCAGTCGCAATATGGAGGTGTGGGTTTTCGTGGAAGTCATGGTTTTTGGCCTCGAATGTCGGAACCGCCACGGCCACCACCACCACCAATGCCACCGGCACATAGATATTATCGGTGGTCGGAACCCCTACCTTATTATTTGCAGGAGCAATCGACACCGGTGGGGAATGCGCCGGGGCACTACCTATTCAACGACGAGAATACAGAAGGGTGTATGATTGTCTAA
mRNA sequence
ATGGCTTCCAATGAAGGAGTCGTTTCCATAGACATGGATATAGAAGCAGGATTGGTAAAAATCAGTGGAGGAAACAACTTGGATCCATCAATCTTTGTAAAAGCAATTGCAAAAGCTGGCAAAAAAGCAAAATTTTCGGCCATGAAGAATACGGCACCGGCACCGATTGGGAAAAGGGCACAATTTCCAGCTGGGGAGAATGCGGCACCGGCACTGATGTCGGTGCCGGCGCCGGAAACCACCATTGACAATGTTTCGAATCATCATAAGAACCCTTCCATTAATTCAGACAATCACTGTTATAAAATTGACAGGACTCAACATGGCAATTCCGGTTCCGGCCATTTTTCCGACCACCATGGCTGGTCCGACAAGGTTCACATCAACGAGGCGGCCGCCGTCAATCCGCCAGTGGCTCTGCCACTTCACAACCAGTTTATGCGACCGCAGTCGCAATATGGAGGTGTGGGTTTTCGTGGAAGTCATGGTTTTTGGCCTCGAATGTCGGAACCGCCACGGCCACCACCACCACCAATGCCACCGGCACATAGATATTATCGGTGGTCGGAACCCCTACCTTATTATTTGCAGGAGCAATCGACACCGGTGGGGAATGCGCCGGGGCACTACCTATTCAACGACGAGAATACAGAAGGGTGTATGATTGTCTAA
Coding sequence (CDS)
ATGGCTTCCAATGAAGGAGTCGTTTCCATAGACATGGATATAGAAGCAGGATTGGTAAAAATCAGTGGAGGAAACAACTTGGATCCATCAATCTTTGTAAAAGCAATTGCAAAAGCTGGCAAAAAAGCAAAATTTTCGGCCATGAAGAATACGGCACCGGCACCGATTGGGAAAAGGGCACAATTTCCAGCTGGGGAGAATGCGGCACCGGCACTGATGTCGGTGCCGGCGCCGGAAACCACCATTGACAATGTTTCGAATCATCATAAGAACCCTTCCATTAATTCAGACAATCACTGTTATAAAATTGACAGGACTCAACATGGCAATTCCGGTTCCGGCCATTTTTCCGACCACCATGGCTGGTCCGACAAGGTTCACATCAACGAGGCGGCCGCCGTCAATCCGCCAGTGGCTCTGCCACTTCACAACCAGTTTATGCGACCGCAGTCGCAATATGGAGGTGTGGGTTTTCGTGGAAGTCATGGTTTTTGGCCTCGAATGTCGGAACCGCCACGGCCACCACCACCACCAATGCCACCGGCACATAGATATTATCGGTGGTCGGAACCCCTACCTTATTATTTGCAGGAGCAATCGACACCGGTGGGGAATGCGCCGGGGCACTACCTATTCAACGACGAGAATACAGAAGGGTGTATGATTGTCTAA
Protein sequence
MASNEGVVSIDMDIEAGLVKISGGNNLDPSIFVKAIAKAGKKAKFSAMKNTAPAPIGKRAQFPAGENAAPALMSVPAPETTIDNVSNHHKNPSINSDNHCYKIDRTQHGNSGSGHFSDHHGWSDKVHINEAAAVNPPVALPLHNQFMRPQSQYGGVGFRGSHGFWPRMSEPPRPPPPPMPPAHRYYRWSEPLPYYLQEQSTPVGNAPGHYLFNDENTEGCMIV
Homology
BLAST of HG10022868 vs. NCBI nr
Match:
KAA0057596.1 (hypothetical protein E6C27_scaffold497G00730 [Cucumis melo var. makuwa])
HSP 1 Score: 270.4 bits (690), Expect = 1.4e-68
Identity = 152/248 (61.29%), Postives = 170/248 (68.55%), Query Frame = 0
Query: 1 MASNEGVVSIDMDIEAGLVKISGGNNLDPSIFVKAIAKAGKKAKFSAMKNTAPA------ 60
MASNEGV S++M+I+ GLVKISG +N DPSIFVK IAK GKKA+F A +N+APA
Sbjct: 1 MASNEGVTSVEMNIQTGLVKISGESNFDPSIFVKTIAKTGKKAQFPATENSAPAPTPTAT 60
Query: 61 PIGKRAQFPAGENAAPALMSVPAPETTIDNVSNHH--KNPSINSDNHCYKIDRTQH-GNS 120
PIG+ QFP EN AP T DN S HH SINS+NHC K +RT H GNS
Sbjct: 61 PIGQNPQFPTREN------MTSAPAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNS 120
Query: 121 GSGHFSDHHGWSDKVHINEAAAVNPPVALPLHNQ-FMR---------PQSQYGGVGFRGS 180
+G+FSDH SDKVHINEAAAVNPPV LPL N+ FMR P QYG + FRGS
Sbjct: 121 DAGNFSDHRSRSDKVHINEAAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGS 180
Query: 181 HGFWPRMSEP---PRPPPPP---MPPAHRYYRWSEPLPYYLQEQSTPVGNAPGHYLFNDE 224
HGFWP MSEP PPPPP M P H YYRW EP+PYYLQEQ PVGN P HYLFNDE
Sbjct: 181 HGFWPGMSEPWSSASPPPPPMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHYLFNDE 240
BLAST of HG10022868 vs. NCBI nr
Match:
KGN45423.2 (hypothetical protein Csa_015802, partial [Cucumis sativus])
HSP 1 Score: 196.8 bits (499), Expect = 2.0e-46
Identity = 110/186 (59.14%), Postives = 124/186 (66.67%), Query Frame = 0
Query: 48 MKNT-APAPIGKRAQFPAGENAAPALMSVPAPETTIDNVSNH--HKNPSINSDNHCYKID 107
M+NT AP+PI + QFP EN A PA T+ DN S H H + SINS+NHC K D
Sbjct: 1 MQNTAAPSPIAQNPQFPTKENMTSAPAPAPA-ATSSDNASGHPIHHSHSINSNNHCCKSD 60
Query: 108 RTQHGNSGSGHFSDHHGWSDKVHINEAAAVNPPVALPLHNQFMR----------PQSQYG 167
GNS +G+FSDH W DKVHINEAA+VNPPVALPLHN+ + P QYG
Sbjct: 61 ----GNSDAGNFSDHRSWPDKVHINEAASVNPPVALPLHNRMLMRPPMPSLRPPPPPQYG 120
Query: 168 G-VGFRGSHGFWPRMSEPPRPPPPPMPPAHRYYRWSEPLPYYLQEQSTPVGNAPGHYLFN 220
+GFRGSHGFWP MSEP P P PP H YYRW EP+PYYLQEQ PVGN P HY+FN
Sbjct: 121 DHMGFRGSHGFWPGMSEPWSSPSHP-PPPHSYYRWPEPVPYYLQEQQPPVGNTPNHYVFN 180
BLAST of HG10022868 vs. NCBI nr
Match:
TYK20998.1 (hypothetical protein E5676_scaffold328G00250 [Cucumis melo var. makuwa])
HSP 1 Score: 196.4 bits (498), Expect = 2.5e-46
Identity = 106/166 (63.86%), Postives = 115/166 (69.28%), Query Frame = 0
Query: 77 APETTIDNVSNHH--KNPSINSDNHCYKIDRTQH-GNSGSGHFSDHHGWSDKVHINEAAA 136
AP T DN S HH SINS+NHC K +RT H GNS +G+FSDH SDKVHINEAAA
Sbjct: 4 APAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFSDHRSRSDKVHINEAAA 63
Query: 137 VNPPVALPLHNQ-FMR---------PQSQYGGVGFRGSHGFWPRMSEP---PRPPPPP-- 196
VNPPV LPL N+ FMR P QYG + FRGSHGFWP MSEP PPPPP
Sbjct: 64 VNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFWPGMSEPWSSASPPPPPMT 123
Query: 197 -MPPAHRYYRWSEPLPYYLQEQSTPVGNAPGHYLFNDENTEGCMIV 224
M P H YYRW EP+PYYLQEQ PVGN P HYLFNDENTEGC+I+
Sbjct: 124 AMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHYLFNDENTEGCVII 169
BLAST of HG10022868 vs. NCBI nr
Match:
KAG6593135.1 (hypothetical protein SDJN03_12611, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 149.1 bits (375), Expect = 4.7e-32
Identity = 102/236 (43.22%), Postives = 120/236 (50.85%), Query Frame = 0
Query: 1 MASNEGVVSIDMDIEAGLVKISGGNNLDPSIFVKAIAKAGKKAKFSAMKNTAPAPIGKRA 60
MA+NE V S+ +DI+ GLV I+ DP V+A+++ GK A+ M APAP A
Sbjct: 1 MAANEDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYAAPAPAASAA 60
Query: 61 QFPAGENAAPALMSVPAPETTIDNVSNHHKNPSINSDNHCYKIDRTQHGNSGSGHFSDHH 120
D+V H PS SD HC KID TQ+ G
Sbjct: 61 --------------------VRDSV--HPNIPSAASDPHCNKIDWTQNCVPG-------- 120
Query: 121 GWSDKVHINEAAAVNPPVALPL-HNQFMRPQSQYGGVGFRGSHGFWPRMSEP---PRPP- 180
S KVH NEAA PPV +P H +RP SQ+GGVG S GF M EP P PP
Sbjct: 121 --SSKVHFNEAAGAVPPVDVPYRHRLSLRPGSQFGGVGHDASRGFGRPMMEPLPQPLPPA 180
Query: 181 -----PPPMPPAHRYYRWSEPLPYYLQEQSTP---VGNAPGHYLFNDENTEGCMIV 224
PP MPP YYRWSEP PYY Q+Q P V APGHYLFNDEN + C I+
Sbjct: 181 MPPAMPPAMPPGDGYYRWSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII 204
BLAST of HG10022868 vs. NCBI nr
Match:
XP_040989032.1 (heavy metal-associated isoprenylated plant protein 42-like [Juglans microcarpa x Juglans regia])
HSP 1 Score: 59.7 bits (143), Expect = 3.7e-05
Identity = 71/255 (27.84%), Postives = 112/255 (43.92%), Query Frame = 0
Query: 1 MASNEGVVSIDMDIEAGLVKISGGNNLDPSIFVKAIAKAGKKAK----FSAMKNTAPAPI 60
+ + GV SI +D E LV +SG N+DP+ V AI + GKK + + P +
Sbjct: 31 LQKSPGVNSILVDKEKDLVIVSG--NIDPTKLVDAIKRIGKKNAEVLFYEKDPSLVPQKL 90
Query: 61 GKRAQFPAGENAAPA-LMSVPAPETTIDNVSNHHKNPSINSDNHCYKIDRT---QHGNSG 120
+G + + V E +N H K+ +++N +K+ RT H +
Sbjct: 91 NHLFNKISGTHCEDSDTHVVDDAEDNEENNDIHDKSCEFSNNNTIHKLKRTGRGSHRHDN 150
Query: 121 SGHFSDHHGWSDKVHINEAAAVNPPVA--------LPLHNQFMRPQSQYGGVGFRGSHGF 180
H++ H S+ ++I NP A +P RP Y G + +
Sbjct: 151 HHHYNVHGKGSENINIRGRVFANPSAAAATRGYEHVPAGLPPARPPYVYQG------YDW 210
Query: 181 WPRM--SEPPRPPPPPMPPAH--RYYRWSEPLP------------YYLQEQSTPVGNAPG 224
+P M S PPRPPPPP+ PA+ RY + + P P Y + + P N+
Sbjct: 211 YPTMMYSGPPRPPPPPLLPAYHDRYRQINLPPPPGAALIMQPAYTPYYKRRDPPNSNSIF 270
BLAST of HG10022868 vs. ExPASy TrEMBL
Match:
A0A5A7UTY4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold497G00730 PE=4 SV=1)
HSP 1 Score: 270.4 bits (690), Expect = 6.7e-69
Identity = 152/248 (61.29%), Postives = 170/248 (68.55%), Query Frame = 0
Query: 1 MASNEGVVSIDMDIEAGLVKISGGNNLDPSIFVKAIAKAGKKAKFSAMKNTAPA------ 60
MASNEGV S++M+I+ GLVKISG +N DPSIFVK IAK GKKA+F A +N+APA
Sbjct: 1 MASNEGVTSVEMNIQTGLVKISGESNFDPSIFVKTIAKTGKKAQFPATENSAPAPTPTAT 60
Query: 61 PIGKRAQFPAGENAAPALMSVPAPETTIDNVSNHH--KNPSINSDNHCYKIDRTQH-GNS 120
PIG+ QFP EN AP T DN S HH SINS+NHC K +RT H GNS
Sbjct: 61 PIGQNPQFPTREN------MTSAPAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNS 120
Query: 121 GSGHFSDHHGWSDKVHINEAAAVNPPVALPLHNQ-FMR---------PQSQYGGVGFRGS 180
+G+FSDH SDKVHINEAAAVNPPV LPL N+ FMR P QYG + FRGS
Sbjct: 121 DAGNFSDHRSRSDKVHINEAAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGS 180
Query: 181 HGFWPRMSEP---PRPPPPP---MPPAHRYYRWSEPLPYYLQEQSTPVGNAPGHYLFNDE 224
HGFWP MSEP PPPPP M P H YYRW EP+PYYLQEQ PVGN P HYLFNDE
Sbjct: 181 HGFWPGMSEPWSSASPPPPPMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHYLFNDE 240
BLAST of HG10022868 vs. ExPASy TrEMBL
Match:
A0A0A0K5U2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392360 PE=4 SV=1)
HSP 1 Score: 266.2 bits (679), Expect = 1.3e-67
Identity = 146/237 (61.60%), Postives = 166/237 (70.04%), Query Frame = 0
Query: 1 MASNEGVVSIDMDIEAGLVKISGGNNLDPSIFVKAIAKAGKKAKFSAMKNT-APAPIGKR 60
MASNEGV S++M+IE GLVKISG N DP IF+K I KAGKKA+F AM+NT AP+PI +
Sbjct: 1 MASNEGVTSVEMNIETGLVKISGEKNFDPFIFLKTITKAGKKAQFPAMQNTAAPSPIAQN 60
Query: 61 AQFPAGENAAPALMSVPAPETTIDNVSNH--HKNPSINSDNHCYKIDRTQHGNSGSGHFS 120
QFP EN A PA T+ DN S H H + SINS+NHC K D GNS +G+FS
Sbjct: 61 PQFPTKENMTSAPAPAPA-ATSSDNASGHPIHHSHSINSNNHCCKSD----GNSDAGNFS 120
Query: 121 DHHGWSDKVHINEAAAVNPPVALPLHNQFMR----------PQSQYGG-VGFRGSHGFWP 180
DH W DKVHINEAA+VNPPVALPLHN+ + P QYG +GFRGSHGFWP
Sbjct: 121 DHRSWPDKVHINEAASVNPPVALPLHNRMLMRPPMPSLRPPPPPQYGDHMGFRGSHGFWP 180
Query: 181 RMSEPPRPPPPPMPPAHRYYRWSEPLPYYLQEQSTPVGNAPGHYLFNDENTEGCMIV 224
MSEP P P PP H YYRW EP+PYYLQEQ PVGN P HY+FNDENTEGC+IV
Sbjct: 181 GMSEPWSSPSHP-PPPHSYYRWPEPVPYYLQEQQPPVGNTPNHYVFNDENTEGCIIV 231
BLAST of HG10022868 vs. ExPASy TrEMBL
Match:
A0A5D3DBX5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold328G00250 PE=4 SV=1)
HSP 1 Score: 196.4 bits (498), Expect = 1.2e-46
Identity = 106/166 (63.86%), Postives = 115/166 (69.28%), Query Frame = 0
Query: 77 APETTIDNVSNHH--KNPSINSDNHCYKIDRTQH-GNSGSGHFSDHHGWSDKVHINEAAA 136
AP T DN S HH SINS+NHC K +RT H GNS +G+FSDH SDKVHINEAAA
Sbjct: 4 APAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFSDHRSRSDKVHINEAAA 63
Query: 137 VNPPVALPLHNQ-FMR---------PQSQYGGVGFRGSHGFWPRMSEP---PRPPPPP-- 196
VNPPV LPL N+ FMR P QYG + FRGSHGFWP MSEP PPPPP
Sbjct: 64 VNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFWPGMSEPWSSASPPPPPMT 123
Query: 197 -MPPAHRYYRWSEPLPYYLQEQSTPVGNAPGHYLFNDENTEGCMIV 224
M P H YYRW EP+PYYLQEQ PVGN P HYLFNDENTEGC+I+
Sbjct: 124 AMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHYLFNDENTEGCVII 169
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0057596.1 | 1.4e-68 | 61.29 | hypothetical protein E6C27_scaffold497G00730 [Cucumis melo var. makuwa] | [more] |
KGN45423.2 | 2.0e-46 | 59.14 | hypothetical protein Csa_015802, partial [Cucumis sativus] | [more] |
TYK20998.1 | 2.5e-46 | 63.86 | hypothetical protein E5676_scaffold328G00250 [Cucumis melo var. makuwa] | [more] |
KAG6593135.1 | 4.7e-32 | 43.22 | hypothetical protein SDJN03_12611, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_040989032.1 | 3.7e-05 | 27.84 | heavy metal-associated isoprenylated plant protein 42-like [Juglans microcarpa x... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7UTY4 | 6.7e-69 | 61.29 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A0A0K5U2 | 1.3e-67 | 61.60 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392360 PE=4 SV=1 | [more] |
A0A5D3DBX5 | 1.2e-46 | 63.86 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |