
HG10022584 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGATGGGAGCTGTTTTGCATGATGATTGTGGGAGAGCCATTGTTACCCATGCTCTTGTTTGTCCAGGTTGTGTATCGGCAAAAGATGGTGAAATTTTTGTTTTGACAACTGGTTTGAAGTTGGTTGAAGCTCATGGATACTCGGGATTTTGGGTGGAAATGGATGTCGAAATTGTAGTGAAAAAGATCCATGTTTTTTTTTCGTTAGTCCCTAATGGTATTATTTATGTTGAAGCATTCTCCTTAATGCAAAGGTTGGTGGTTGTGAGCTTGGTTTATACTCTTAGAAGTTATAATAGAGTGGCCCATAATTTGGCCAATCAAGCTATTGTAGCTGATTCTTCTTGTGTTTGGATTGATTGTATTTTCCATGGCTCTCAAACATTGTTGGGACTAACCCTAGACCCTTACTCCTCAAAACCCTTTAAACCCTAA ATGGGGATGGGAGCTGTTTTGCATGATGATTGTGGGAGAGCCATTGTTACCCATGCTCTTGTTTGTCCAGGTTGTGTATCGGCAAAAGATGGTGAAATTTTTGTTTTGACAACTGGTTTGAAGTTGGTTGAAGCTCATGGATACTCGGGATTTTGGGTGGAAATGGATGTCGAAATTGTAGTGAAAAAGATCCATGTTTTTTTTTCGTTAGTCCCTAATGGTATTATTTATGTTGAAGCATTCTCCTTAATGCAAAGGTTGGTGGTTGTGAGCTTGGTTTATACTCTTAGAAGTTATAATAGAGTGGCCCATAATTTGGCCAATCAAGCTATTGTAGCTGATTCTTCTTGTGTTTGGATTGATTGTATTTTCCATGGCTCTCAAACATTGTTGGGACTAACCCTAGACCCTTACTCCTCAAAACCCTTTAAACCCTAA ATGGGGATGGGAGCTGTTTTGCATGATGATTGTGGGAGAGCCATTGTTACCCATGCTCTTGTTTGTCCAGGTTGTGTATCGGCAAAAGATGGTGAAATTTTTGTTTTGACAACTGGTTTGAAGTTGGTTGAAGCTCATGGATACTCGGGATTTTGGGTGGAAATGGATGTCGAAATTGTAGTGAAAAAGATCCATGTTTTTTTTTCGTTAGTCCCTAATGGTATTATTTATGTTGAAGCATTCTCCTTAATGCAAAGGTTGGTGGTTGTGAGCTTGGTTTATACTCTTAGAAGTTATAATAGAGTGGCCCATAATTTGGCCAATCAAGCTATTGTAGCTGATTCTTCTTGTGTTTGGATTGATTGTATTTTCCATGGCTCTCAAACATTGTTGGGACTAACCCTAGACCCTTACTCCTCAAAACCCTTTAAACCCTAA MGMGAVLHDDCGRAIVTHALVCPGCVSAKDGEIFVLTTGLKLVEAHGYSGFWVEMDVEIVVKKIHVFFSLVPNGIIYVEAFSLMQRLVVVSLVYTLRSYNRVAHNLANQAIVADSSCVWIDCIFHGSQTLLGLTLDPYSSKPFKP Homology
BLAST of HG10022584 vs. NCBI nr
Match: XP_024199929.1 (uncharacterized protein LOC112203151 [Rosa chinensis]) HSP 1 Score: 58.9 bits (141), Expect = 4.1e-05 Identity = 39/121 (32.23%), Postives = 56/121 (46.28%), Query Frame = 0
BLAST of HG10022584 vs. NCBI nr
Match: KAG2635063.1 (hypothetical protein PVAP13_2NG311303 [Panicum virgatum]) HSP 1 Score: 56.6 bits (135), Expect = 2.0e-04 Identity = 37/119 (31.09%), Postives = 55/119 (46.22%), Query Frame = 0
BLAST of HG10022584 vs. NCBI nr
Match: KAF4394884.1 (hypothetical protein G4B88_002761 [Cannabis sativa]) HSP 1 Score: 55.8 bits (133), Expect = 3.5e-04 Identity = 34/123 (27.64%), Postives = 59/123 (47.97%), Query Frame = 0
BLAST of HG10022584 vs. NCBI nr
Match: XP_024190675.1 (uncharacterized protein LOC112194687 [Rosa chinensis]) HSP 1 Score: 55.8 bits (133), Expect = 3.5e-04 Identity = 35/127 (27.56%), Postives = 62/127 (48.82%), Query Frame = 0
BLAST of HG10022584 vs. NCBI nr
Match: XP_019198406.1 (PREDICTED: uncharacterized protein LOC109192287 [Ipomoea nil]) HSP 1 Score: 55.5 bits (132), Expect = 4.6e-04 Identity = 30/120 (25.00%), Postives = 57/120 (47.50%), Query Frame = 0
BLAST of HG10022584 vs. ExPASy TrEMBL
Match: A0A7J6HHY1 (RNase H domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_002761 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.7e-04 Identity = 34/123 (27.64%), Postives = 59/123 (47.97%), Query Frame = 0
BLAST of HG10022584 vs. ExPASy TrEMBL
Match: A0A2I4FKP7 (uncharacterized protein LOC108999774 OS=Juglans regia OX=51240 GN=LOC108999774 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.9e-04 Identity = 39/119 (32.77%), Postives = 62/119 (52.10%), Query Frame = 0
BLAST of HG10022584 vs. ExPASy TrEMBL
Match: A0A7J6I0M5 (RNase H domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_023029 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 6.4e-04 Identity = 33/123 (26.83%), Postives = 58/123 (47.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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