HG10022465 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10022465
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein translation factor SUI1 homolog
Location	Chr05: 24610280 .. 24610618 (+)
RNA-Seq Expression	HG10022465
Synteny	HG10022465

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGAATTAGACTACCAGATCCCATCTGCATTTGATCCATTTGCCGACGCCAGGGATTCGGATGCCCCCGGAACAAAAGAGTATGTTCATGTCCGTGTCCAGCAGAGGAATGGCAAGAAGTGCTTGACTACAGTTCAAGGTCTGAAGAAAGAGTTCAGCTACGAGAAGATCCTTAAAGACGTGAAGAAGGAATTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAGGGTGATCAGCGCAAGAACGTGTCTCAGTTTCTTGTTCAGGCTGGTCTTGTCAAGAAGGATCAGATCAAGATCCATGGGTTTTGA

mRNA sequence

ATGGTTGAATTAGACTACCAGATCCCATCTGCATTTGATCCATTTGCCGACGCCAGGGATTCGGATGCCCCCGGAACAAAAGAGTATGTTCATGTCCGTGTCCAGCAGAGGAATGGCAAGAAGTGCTTGACTACAGTTCAAGGTCTGAAGAAAGAGTTCAGCTACGAGAAGATCCTTAAAGACGTGAAGAAGGAATTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAGGGTGATCAGCGCAAGAACGTGTCTCAGTTTCTTGTTCAGGCTGGTCTTGTCAAGAAGGATCAGATCAAGATCCATGGGTTTTGA

Coding sequence (CDS)

ATGGTTGAATTAGACTACCAGATCCCATCTGCATTTGATCCATTTGCCGACGCCAGGGATTCGGATGCCCCCGGAACAAAAGAGTATGTTCATGTCCGTGTCCAGCAGAGGAATGGCAAGAAGTGCTTGACTACAGTTCAAGGTCTGAAGAAAGAGTTCAGCTACGAGAAGATCCTTAAAGACGTGAAGAAGGAATTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAGGGTGATCAGCGCAAGAACGTGTCTCAGTTTCTTGTTCAGGCTGGTCTTGTCAAGAAGGATCAGATCAAGATCCATGGGTTTTGA

Protein sequence

MVELDYQIPSAFDPFADARDSDAPGTKEYVHVRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF

Homology

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BLAST of HG10022465 vs. NCBI nr
Match: XP_004139787.1 (protein translation factor SUI1 homolog 1 [Cucumis sativus] >XP_008447738.1 PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis melo] >XP_038899382.1 protein translation factor SUI1 homolog 1-like [Benincasa hispida] >KGN44162.1 hypothetical protein Csa_015864 [Cucumis sativus])

HSP 1 Score: 225.7 bits (574), Expect = 2.0e-55
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFADARDSDAPGTKEYVHVRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD+QIPSAFDPFADA+DSDAPGTKEYVH+RVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of HG10022465 vs. NCBI nr
Match: KAA0025154.1 (SUI1 domain-containing protein [Cucumis melo var. makuwa] >TYK23112.1 SUI1 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 225.7 bits (574), Expect = 2.0e-55
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFADARDSDAPGTKEYVHVRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD+QIPSAFDPFADA+DSDAPGTKEYVH+RVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 39  MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 98

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 99  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 150

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BLAST of HG10022465 vs. NCBI nr
Match: XP_022976609.1 (protein translation factor SUI1 homolog 1 [Cucurbita maxima] >XP_022976610.1 protein translation factor SUI1 homolog 1 [Cucurbita maxima] >KAG6592045.1 Protein translation factor SUI1-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 223.4 bits (568), Expect = 9.8e-55
Identity = 108/112 (96.43%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFADARDSDAPGTKEYVHVRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD+QIPSAFDPFADA+DSDAPGTK YVH+RVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of HG10022465 vs. NCBI nr
Match: XP_023536045.1 (protein translation factor SUI1 homolog 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222.2 bits (565), Expect = 2.2e-54
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFADARDSDAPGTKEYVHVRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD+QIPSAFDPFAD++DSDAPGTK YVH+RVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADSKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of HG10022465 vs. NCBI nr
Match: XP_022936190.1 (protein translation factor SUI1 homolog 1 [Cucurbita moschata])

HSP 1 Score: 222.2 bits (565), Expect = 2.2e-54
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFADARDSDAPGTKEYVHVRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD+QIPSAFDPFADA+DSDAPGTK YVH+RVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQD+ELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDRELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of HG10022465 vs. ExPASy Swiss-Prot
Match: P41568 (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4g27130 PE=1 SV=2)

HSP 1 Score: 185.7 bits (470), Expect = 3.0e-46
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFADARDSDA-PGTKEYVHVRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTKEYVH+RVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of HG10022465 vs. ExPASy Swiss-Prot
Match: Q9SQF4 (Protein translation factor SUI1 homolog OS=Brassica oleracea OX=3712 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 8.6e-46
Identity = 90/113 (79.65%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFADARDSDA-PGTKEYVHVRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTKEYVH+RVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD I+IHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113

[Close]

BLAST of HG10022465 vs. ExPASy Swiss-Prot
Match: Q94JV4 (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g54290 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.1e-45
Identity = 89/113 (78.76%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFADARDSDA-PGTKEYVHVRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M +L+ Q+P+AFDPFADA   D+  GTKEYVH+RVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of HG10022465 vs. ExPASy Swiss-Prot
Match: P56330 (Protein translation factor SUI1 homolog OS=Zea mays OX=4577 GN=TIF PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 9.5e-45
Identity = 88/115 (76.52%), Postives = 100/115 (86.96%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFADARDSD---APGTKEYVHVRVQQRNGKKCLTTVQGLKKEFSYEK 60
           M +LD QIP+AFDPFA+A   D   A G+K+YVHVR+QQRNG+K LTTVQGLKKEFSY K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 60

Query: 61  ILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           ILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]

BLAST of HG10022465 vs. ExPASy Swiss-Prot
Match: A6MZM2 (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=GOS2 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 9.5e-45
Identity = 88/115 (76.52%), Postives = 100/115 (86.96%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFADARDSD---APGTKEYVHVRVQQRNGKKCLTTVQGLKKEFSYEK 60
           M +LD QIP+AFDPFA+A   D   A G+K+YVHVR+QQRNG+K LTTVQGLKKEFSY K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 61  ILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           ILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]

BLAST of HG10022465 vs. ExPASy TrEMBL
Match: A0A5D3DHR8 (SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001030 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 9.5e-56
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFADARDSDAPGTKEYVHVRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD+QIPSAFDPFADA+DSDAPGTKEYVH+RVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 39  MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 98

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 99  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 150

[Close]

BLAST of HG10022465 vs. ExPASy TrEMBL
Match: A0A0A0K771 (SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G209580 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 9.5e-56
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFADARDSDAPGTKEYVHVRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD+QIPSAFDPFADA+DSDAPGTKEYVH+RVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of HG10022465 vs. ExPASy TrEMBL
Match: A0A1S3BI45 (protein translation factor SUI1 homolog 1-like OS=Cucumis melo OX=3656 GN=LOC103490142 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 9.5e-56
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFADARDSDAPGTKEYVHVRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD+QIPSAFDPFADA+DSDAPGTKEYVH+RVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of HG10022465 vs. ExPASy TrEMBL
Match: A0A6J1IJY4 (protein translation factor SUI1 homolog 1 OS=Cucurbita maxima OX=3661 GN=LOC111476953 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 4.7e-55
Identity = 108/112 (96.43%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFADARDSDAPGTKEYVHVRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD+QIPSAFDPFADA+DSDAPGTK YVH+RVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of HG10022465 vs. ExPASy TrEMBL
Match: A0A6J1FCX8 (protein translation factor SUI1 homolog 1 OS=Cucurbita moschata OX=3662 GN=LOC111442862 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.1e-54
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFADARDSDAPGTKEYVHVRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD+QIPSAFDPFADA+DSDAPGTK YVH+RVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQD+ELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDRELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of HG10022465 vs. TAIR 10
Match: AT5G54940.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 200.7 bits (509), Expect = 6.3e-52
Identity = 94/112 (83.93%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFADARDSDAPGTKEYVHVRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD QIPSA+DPFA+A+DSDAPG KE +H+R+QQRNGKK LTTVQGLKKE+SYE+ILK
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQ G+ KKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112

[Close]

BLAST of HG10022465 vs. TAIR 10
Match: AT5G54940.2 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 200.7 bits (509), Expect = 6.3e-52
Identity = 94/112 (83.93%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFADARDSDAPGTKEYVHVRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD QIPSA+DPFA+A+DSDAPG KE +H+R+QQRNGKK LTTVQGLKKE+SYE+ILK
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQ G+ KKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112

[Close]

BLAST of HG10022465 vs. TAIR 10
Match: AT4G27130.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 185.7 bits (470), Expect = 2.1e-47
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFADARDSDA-PGTKEYVHVRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTKEYVH+RVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of HG10022465 vs. TAIR 10
Match: AT5G54760.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 185.3 bits (469), Expect = 2.7e-47
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFADARDSDA-PGTKEYVHVRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTKEYVH+RVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of HG10022465 vs. TAIR 10
Match: AT5G54760.2 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 185.3 bits (469), Expect = 2.7e-47
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFADARDSDA-PGTKEYVHVRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTKEYVH+RVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

The following BLAST results are available for this feature:

BLAST of HG10022465 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139787.1	2.0e-55	97.32	protein translation factor SUI1 homolog 1 [Cucumis sativus] >XP_008447738.1 PRED...	[more]
KAA0025154.1	2.0e-55	97.32	SUI1 domain-containing protein [Cucumis melo var. makuwa] >TYK23112.1 SUI1 domai...	[more]
XP_022976609.1	9.8e-55	96.43	protein translation factor SUI1 homolog 1 [Cucurbita maxima] >XP_022976610.1 pro...	[more]
XP_023536045.1	2.2e-54	95.54	protein translation factor SUI1 homolog 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022936190.1	2.2e-54	95.54	protein translation factor SUI1 homolog 1 [Cucurbita moschata]	[more]

BLAST of HG10022465 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P41568	3.0e-46	80.53	Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4...	[more]
Q9SQF4	8.6e-46	79.65	Protein translation factor SUI1 homolog OS=Brassica oleracea OX=3712 PE=3 SV=1	[more]
Q94JV4	1.1e-45	78.76	Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
P56330	9.5e-45	76.52	Protein translation factor SUI1 homolog OS=Zea mays OX=4577 GN=TIF PE=3 SV=1	[more]
A6MZM2	9.5e-45	76.52	Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 G...	[more]

BLAST of HG10022465 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DHR8	9.5e-56	97.32	SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0K771	9.5e-56	97.32	SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G209580 PE=3 S...	[more]
A0A1S3BI45	9.5e-56	97.32	protein translation factor SUI1 homolog 1-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1IJY4	4.7e-55	96.43	protein translation factor SUI1 homolog 1 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1FCX8	1.1e-54	95.54	protein translation factor SUI1 homolog 1 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of HG10022465 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54940.1	6.3e-52	83.93	Translation initiation factor SUI1 family protein	[more]
AT5G54940.2	6.3e-52	83.93	Translation initiation factor SUI1 family protein	[more]
AT4G27130.1	2.1e-47	80.53	Translation initiation factor SUI1 family protein	[more]
AT5G54760.1	2.7e-47	80.53	Translation initiation factor SUI1 family protein	[more]
AT5G54760.2	2.7e-47	80.53	Translation initiation factor SUI1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005874	Eukaryotic translation initiation factor SUI1	TIGRFAM	TIGR01160	TIGR01160	coord: 7..112 e-value: 4.1E-52 score: 173.4
IPR005874	Eukaryotic translation initiation factor SUI1	PIRSF	PIRSF004499	Transl_init_SUI1_Euk	coord: 1..112 e-value: 6.1E-47 score: 156.3
IPR005874	Eukaryotic translation initiation factor SUI1	CDD	cd11566	eIF1_SUI1	coord: 28..111 e-value: 2.05222E-47 score: 144.985
IPR001950	SUI1 domain	PFAM	PF01253	SUI1	coord: 27..101 e-value: 8.0E-24 score: 83.9
IPR001950	SUI1 domain	PROSITE	PS50296	SUI1	coord: 30..100 score: 22.568838
None	No IPR available	GENE3D	3.30.780.10		coord: 2..112 e-value: 4.7E-45 score: 154.9
None	No IPR available	PANTHER	PTHR10388	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	coord: 1..112
None	No IPR available	PANTHER	PTHR10388:SF56	BNAA10G09260D PROTEIN	coord: 1..112
IPR036877	SUI1 domain superfamily	SUPERFAMILY	55159	eIF1-like	coord: 4..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10022465.1	HG10022465.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003743	translation initiation factor activity