HG10022426 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10022426
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	AAI domain-containing protein
Location	Chr05: 24133782 .. 24134108 (-)
RNA-Seq Expression	HG10022426
Synteny	HG10022426

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCCAACAAGCTTCATCTCCTACCATTTCTATTTTCCGTTGTCATCGTCATCCTTCTTCTGGACAATGGTGTCACCGCCTATCCACTTTGTAAGATTGACACCATTGAGCTCGGGATTTGCCGCCCGGCCGTGACCCCGCCAGAGCATGGCCAACCCCTGCCACTCCCCACCGACGCTTGTTGTTCGGTGGTTCGTCGTGCTGACCTTAAGTGTCTTTGCAATCTCAAGTCAGCCCTTCCCTCCATGGGGATCGACCCTGCCAATGCCTTGGCTTTGCCAACCAAGTGTGGCACCCCATCCCCACCCGAGTGTCATCTCTAA

mRNA sequence

ATGGCCCCCAACAAGCTTCATCTCCTACCATTTCTATTTTCCGTTGTCATCGTCATCCTTCTTCTGGACAATGGTGTCACCGCCTATCCACTTTGTAAGATTGACACCATTGAGCTCGGGATTTGCCGCCCGGCCGTGACCCCGCCAGAGCATGGCCAACCCCTGCCACTCCCCACCGACGCTTGTTGTTCGGTGGTTCGTCGTGCTGACCTTAAGTGTCTTTGCAATCTCAAGTCAGCCCTTCCCTCCATGGGGATCGACCCTGCCAATGCCTTGGCTTTGCCAACCAAGTGTGGCACCCCATCCCCACCCGAGTGTCATCTCTAA

Coding sequence (CDS)

ATGGCCCCCAACAAGCTTCATCTCCTACCATTTCTATTTTCCGTTGTCATCGTCATCCTTCTTCTGGACAATGGTGTCACCGCCTATCCACTTTGTAAGATTGACACCATTGAGCTCGGGATTTGCCGCCCGGCCGTGACCCCGCCAGAGCATGGCCAACCCCTGCCACTCCCCACCGACGCTTGTTGTTCGGTGGTTCGTCGTGCTGACCTTAAGTGTCTTTGCAATCTCAAGTCAGCCCTTCCCTCCATGGGGATCGACCCTGCCAATGCCTTGGCTTTGCCAACCAAGTGTGGCACCCCATCCCCACCCGAGTGTCATCTCTAA

Protein sequence

MAPNKLHLLPFLFSVVIVILLLDNGVTAYPLCKIDTIELGICRPAVTPPEHGQPLPLPTDACCSVVRRADLKCLCNLKSALPSMGIDPANALALPTKCGTPSPPECHL

Homology

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BLAST of HG10022426 vs. NCBI nr
Match: XP_008447695.1 (PREDICTED: putative lipid-transfer protein DIR1 [Cucumis melo] >KAA0048163.1 putative lipid-transfer protein DIR1 [Cucumis melo var. makuwa])

HSP 1 Score: 151.4 bits (381), Expect = 4.6e-33
Identity = 73/106 (68.87%), Postives = 88/106 (83.02%), Query Frame = 0


Query: 1   MAPNKLHLLPFLFSVVIVILLLDNGVTAYPLCKIDTIELGICRPAVTPPEHGQPLPLPTD 60
           MAP+KLHLL     +++++LLL   VT+ PLC+IDT +L +CRPAVTPP+HG+ LPLPTD
Sbjct: 1   MAPSKLHLL-----LLLLVLLLAGAVTSSPLCEIDTTDLEVCRPAVTPPDHGKTLPLPTD 60

Query: 61  ACCSVVRRADLKCLCNLKSALPSMGIDPANALALPTKCGTPSPPEC 107
           ACCSVVRRADLKCLC+LK ALPS GI+ ANALALP+KCG   PPEC
Sbjct: 61  ACCSVVRRADLKCLCSLKYALPSFGINTANALALPSKCGVSPPPEC 101

[Close]

BLAST of HG10022426 vs. NCBI nr
Match: KAG7037349.1 (putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 151.0 bits (380), Expect = 5.9e-33
Identity = 74/108 (68.52%), Postives = 85/108 (78.70%), Query Frame = 0


Query: 1   MAPNKLHLLPFLFSVVIVILLLDNGVTAYPLCKIDTIELGICRPAVTPPEHGQPLPLPTD 60
           MAPNK+ L+  LF + +       GV A PLCKIDT +LG+CRPAVT PEHGQPLPLPT+
Sbjct: 1   MAPNKV-LVAALFLIAV------GGVLASPLCKIDTTDLGVCRPAVTTPEHGQPLPLPTE 60

Query: 61  ACCSVVRRADLKCLCNLKSALPSMGIDPANALALPTKCGTPSPPECHL 109
            CC+VVRRADLKCLCNLKS LP++GID ANA+ALP KCG   PPECHL
Sbjct: 61  GCCAVVRRADLKCLCNLKSMLPAIGIDAANAMALPGKCGLSIPPECHL 101

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BLAST of HG10022426 vs. NCBI nr
Match: KAE8646001.1 (hypothetical protein Csa_015500 [Cucumis sativus])

HSP 1 Score: 146.4 bits (368), Expect = 1.5e-31
Identity = 72/98 (73.47%), Postives = 82/98 (83.67%), Query Frame = 0


Query: 1  MAPNKLHLLPFLFSVVIVILLLDNGVTAYPLCKIDTIELGICRPAVTPPEHGQPLPLPTD 60
          MAP+KLHLL     + +++LLL   VTAYPLCKIDT +L +CR AVTPP+HGQPLPLPT+
Sbjct: 1  MAPSKLHLL-----LPLLVLLLPAAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTE 60

Query: 61 ACCSVVRRADLKCLCNLKSALPSMGIDPANALALPTKC 99
           CCSVVR ADLKCLCNLKS LPSMGID ANALALP+KC
Sbjct: 61 DCCSVVRHADLKCLCNLKSVLPSMGIDTANALALPSKC 93

[Close]

BLAST of HG10022426 vs. NCBI nr
Match: KAG6607773.1 (putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 120.9 bits (302), Expect = 6.6e-24
Identity = 61/99 (61.62%), Postives = 77/99 (77.78%), Query Frame = 0


Query: 8   LLPFLFSVVIVILLLDNGVTAYPLCKIDTIELGICRPAVTPPEHGQPLPLPTDACCSVVR 67
           ++ FL S++  + L+  G  A PLC++DT EL +C+PAV PP HGQPL  PT  CCSVVR
Sbjct: 1   MIKFLASLLFSLFLV--GTIATPLCRVDTKELKMCQPAVAPP-HGQPLQPPTKGCCSVVR 60

Query: 68  RADLKCLCNLKSALPSMGIDPANALALPTKCGTPSPPEC 107
           RADLKCLC+LKS LP++GI+ ANALALP+KCG  +PPEC
Sbjct: 61  RADLKCLCSLKSVLPTIGINTANALALPSKCGIHTPPEC 96

[Close]

BLAST of HG10022426 vs. NCBI nr
Match: KAG7037350.1 (putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 120.6 bits (301), Expect = 8.6e-24
Identity = 61/100 (61.00%), Postives = 77/100 (77.00%), Query Frame = 0


Query: 8   LLPFLFSVVIVILLLDNGVTAYPLCKIDTIELGICRPAVTPPEHGQPLPLPTDACCSVVR 67
           ++ FL S++  + L+  G  A PLC++DT EL +C+PAV PP HGQ L  PT  CCSVVR
Sbjct: 5   MIKFLASLLFSLFLV--GTIATPLCRVDTKELKMCQPAVAPP-HGQLLQPPTKGCCSVVR 64

Query: 68  RADLKCLCNLKSALPSMGIDPANALALPTKCGTPSPPECH 108
           RADLKCLC+LKS LP++GI+ ANALALP+KCG  +PPECH
Sbjct: 65  RADLKCLCSLKSVLPTIGINTANALALPSKCGIHTPPECH 101

[Close]

BLAST of HG10022426 vs. ExPASy TrEMBL
Match: A0A0A0LAS6 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G760500 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.6e-36
Identity = 78/107 (72.90%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 1   MAPNKLHLLPFLFSVVIVILLLDNGVTAYPLCKIDTIELGICRPAVTPPEHGQPLPLPTD 60
           MAP+KLHLL     + +++LLL   VTAYPLCKIDT +L +CR AVTPP+HGQPLPLPT+
Sbjct: 1   MAPSKLHLL-----LPLLVLLLPAAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTE 60

Query: 61  ACCSVVRRADLKCLCNLKSALPSMGIDPANALALPTKCGTPSPPECH 108
            CCSVVR ADLKCLCNLKS LPSMGID ANALALP+KC   SPPECH
Sbjct: 61  DCCSVVRHADLKCLCNLKSVLPSMGIDTANALALPSKCNVASPPECH 102

[Close]

BLAST of HG10022426 vs. ExPASy TrEMBL
Match: A0A5A7TX28 (Putative lipid-transfer protein DIR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G00630 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.2e-33
Identity = 73/106 (68.87%), Postives = 88/106 (83.02%), Query Frame = 0


Query: 1   MAPNKLHLLPFLFSVVIVILLLDNGVTAYPLCKIDTIELGICRPAVTPPEHGQPLPLPTD 60
           MAP+KLHLL     +++++LLL   VT+ PLC+IDT +L +CRPAVTPP+HG+ LPLPTD
Sbjct: 1   MAPSKLHLL-----LLLLVLLLAGAVTSSPLCEIDTTDLEVCRPAVTPPDHGKTLPLPTD 60

Query: 61  ACCSVVRRADLKCLCNLKSALPSMGIDPANALALPTKCGTPSPPEC 107
           ACCSVVRRADLKCLC+LK ALPS GI+ ANALALP+KCG   PPEC
Sbjct: 61  ACCSVVRRADLKCLCSLKYALPSFGINTANALALPSKCGVSPPPEC 101

[Close]

BLAST of HG10022426 vs. ExPASy TrEMBL
Match: A0A1S3BHE7 (putative lipid-transfer protein DIR1 OS=Cucumis melo OX=3656 GN=LOC103490109 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.2e-33
Identity = 73/106 (68.87%), Postives = 88/106 (83.02%), Query Frame = 0


Query: 1   MAPNKLHLLPFLFSVVIVILLLDNGVTAYPLCKIDTIELGICRPAVTPPEHGQPLPLPTD 60
           MAP+KLHLL     +++++LLL   VT+ PLC+IDT +L +CRPAVTPP+HG+ LPLPTD
Sbjct: 1   MAPSKLHLL-----LLLLVLLLAGAVTSSPLCEIDTTDLEVCRPAVTPPDHGKTLPLPTD 60

Query: 61  ACCSVVRRADLKCLCNLKSALPSMGIDPANALALPTKCGTPSPPEC 107
           ACCSVVRRADLKCLC+LK ALPS GI+ ANALALP+KCG   PPEC
Sbjct: 61  ACCSVVRRADLKCLCSLKYALPSFGINTANALALPSKCGVSPPPEC 101

[Close]

BLAST of HG10022426 vs. ExPASy TrEMBL
Match: A0A0A0LBB0 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G759990 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.8e-22
Identity = 62/103 (60.19%), Postives = 75/103 (72.82%), Query Frame = 0


Query: 4   NKLHLLPFLFSVVIVILLLDNGVTAYPLCKIDTIELGICRPAVTPPEHGQPLPLPTDACC 63
           NK  +  FL  + +V++L +   TA  LCK+DT EL +CRPAV  P HG+PL  PT+ CC
Sbjct: 6   NKSSVALFLRLLFLVMVLAE--TTATLLCKVDTKELCVCRPAVA-PLHGKPLQPPTERCC 65

Query: 64  SVVRRADLKCLCNLKSALPSMGIDPANALALPTKCGTPSPPEC 107
           SV+R ADLKCLCNLKS LPS GI+   ALALP+KCG PSPPEC
Sbjct: 66  SVLRSADLKCLCNLKSILPSAGINATIALALPSKCGIPSPPEC 105

[Close]

BLAST of HG10022426 vs. ExPASy TrEMBL
Match: A0A5A7TY68 (Putative lipid-transfer protein DIR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G00600 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 7.4e-21
Identity = 54/82 (65.85%), Postives = 62/82 (75.61%), Query Frame = 0


Query: 25  GVTAYPLCKIDTIELGICRPAVTPPEHGQPLPLPTDACCSVVRRADLKCLCNLKSALPSM 84
           G +A  LCK+DT +L +CRPAV  P HG+PL  PT  CCSVVR ADLKCLCNLKS LPS 
Sbjct: 5   GTSATLLCKVDTKKLCVCRPAVA-PLHGKPLQPPTKRCCSVVRSADLKCLCNLKSILPSA 64

Query: 85  GIDPANALALPTKCGTPSPPEC 107
           GI+   ALALP+KCG  +PPEC
Sbjct: 65  GINATIALALPSKCGIRTPPEC 85

[Close]

BLAST of HG10022426 vs. TAIR 10
Match: AT5G55450.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 4.3e-13
Identity = 38/90 (42.22%), Postives = 52/90 (57.78%), Query Frame = 0


Query: 14  SVVIVILLLDNGVTAYPLCKIDTIELGICRPAVTPPEHGQPLPLPTDACCSVVRRADLKC 73
           ++V+   ++    T+ P+C IDT +L  CRPAVT    G   P P   CC+V R A+L+C
Sbjct: 16  AMVLTAAIMVKEATSIPVCNIDTNDLAKCRPAVT----GNNPPPPGPDCCAVARVANLQC 75

Query: 74  LCNLKSALPSMGIDPANALALPTKCGTPSP 104
           LC  K  LP++GIDP+    L   CG  SP
Sbjct: 76  LCPYKPYLPTVGIDPSRVRPLLANCGVNSP 101

[Close]

BLAST of HG10022426 vs. TAIR 10
Match: AT5G55410.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 4.7e-12
Identity = 34/92 (36.96%), Postives = 53/92 (57.61%), Query Frame = 0


Query: 13  FSVVIVILLLDNGVTAYPLCKIDTIELGICRPAVTPPEHGQPLPLPTDACCSVVRRADLK 72
           F++V+   ++    T+  +C +D  ++  CRPA+T    G   P P + CC VVR+A+ +
Sbjct: 15  FAMVLTFAMMVKEATSMSICDMDINDMQKCRPAIT----GNNPPPPVNDCCVVVRKANFE 74

Query: 73  CLCNLKSALPSMGIDPANALALPTKCGTPSPP 105
           CLC  K  LP + IDP+  +AL  KCG  + P
Sbjct: 75  CLCRFKFYLPILRIDPSKVVALVAKCGVTTVP 102

[Close]

BLAST of HG10022426 vs. TAIR 10
Match: AT5G55410.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 4.7e-12
Identity = 34/92 (36.96%), Postives = 53/92 (57.61%), Query Frame = 0


Query: 13  FSVVIVILLLDNGVTAYPLCKIDTIELGICRPAVTPPEHGQPLPLPTDACCSVVRRADLK 72
           F++V+   ++    T+  +C +D  ++  CRPA+T    G   P P + CC VVR+A+ +
Sbjct: 15  FAMVLTFAMMVKEATSMSICDMDINDMQKCRPAIT----GNNPPPPVNDCCVVVRKANFE 74

Query: 73  CLCNLKSALPSMGIDPANALALPTKCGTPSPP 105
           CLC  K  LP + IDP+  +AL  KCG  + P
Sbjct: 75  CLCRFKFYLPILRIDPSKVVALVAKCGVTTVP 102

[Close]

BLAST of HG10022426 vs. TAIR 10
Match: AT5G55460.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 6.8e-11
Identity = 36/94 (38.30%), Postives = 51/94 (54.26%), Query Frame = 0


Query: 14  SVVIVILLLDNGVTAYPLCKIDTIELGICRPAVTPPEHGQPLPLPTDACCSVVRRADLKC 73
           ++V+  L+L    T+   C I+   L  CRPAV     G   P P   CC +++ A+LKC
Sbjct: 15  AIVLAALVLMEEPTSITACNINANHLEKCRPAVI----GDNPPSPIKECCELLQAANLKC 74

Query: 74  LCNLKSALPSMGIDPANALALPTKCG-TPSPPEC 107
           +C  KS LP + + P+   AL +KCG T  PP C
Sbjct: 75  ICRFKSVLPVLAVYPSKVQALLSKCGLTTIPPAC 104

[Close]

BLAST of HG10022426 vs. TAIR 10
Match: AT3G52130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 3.0e-06
Identity = 29/68 (42.65%), Postives = 36/68 (52.94%), Query Frame = 0


Query: 37  IELGICRPAVTPPEHGQPLPLPTDACCSVVRRADLKCLCNLKSALPSMGIDPANALALPT 96
           ++L  CR AV P     P+P PT+ CCS V      CLC L +  P  GID + AL LP 
Sbjct: 57  VQLIPCRAAVAP---FSPIP-PTEICCSAVVTLGRPCLCLLANGPPLSGIDRSMALQLPQ 116

Query: 97  KCGTPSPP 105
           +C    PP
Sbjct: 117 RCSANFPP 120

The following BLAST results are available for this feature:

BLAST of HG10022426 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447695.1	4.6e-33	68.87	PREDICTED: putative lipid-transfer protein DIR1 [Cucumis melo] >KAA0048163.1 put...	[more]
KAG7037349.1	5.9e-33	68.52	putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. arg...	[more]
KAE8646001.1	1.5e-31	73.47	hypothetical protein Csa_015500 [Cucumis sativus]	[more]
KAG6607773.1	6.6e-24	61.62	putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. sor...	[more]
KAG7037350.1	8.6e-24	61.00	putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. arg...	[more]

BLAST of HG10022426 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10022426 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAS6	3.6e-36	72.90	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G760500 PE=4 SV...	[more]
A0A5A7TX28	2.2e-33	68.87	Putative lipid-transfer protein DIR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3BHE7	2.2e-33	68.87	putative lipid-transfer protein DIR1 OS=Cucumis melo OX=3656 GN=LOC103490109 PE=...	[more]
A0A0A0LBB0	1.8e-22	60.19	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G759990 PE=4 SV...	[more]
A0A5A7TY68	7.4e-21	65.85	Putative lipid-transfer protein DIR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of HG10022426 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55450.1	4.3e-13	42.22	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G55410.1	4.7e-12	36.96	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G55410.2	4.7e-12	36.96	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G55460.1	6.8e-11	38.30	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G52130.1	3.0e-06	42.65	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 32..106 e-value: 0.0036 score: 26.5
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 57..106 e-value: 9.7E-9 score: 35.3
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 29..106 e-value: 1.7E-16 score: 61.8
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 32..106
None	No IPR available	PANTHER	PTHR33122:SF43	LIPID TRANSFER PROTEIN	coord: 7..107
IPR039265	Putative lipid-transfer protein DIR1-like	PANTHER	PTHR33122	LIPID BINDING PROTEIN-RELATED	coord: 7..107
IPR044741	Non-specific lipid-transfer protein-like	CDD	cd04660	nsLTP_like	coord: 32..104 e-value: 1.31607E-16 score: 66.2386

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10022426.1	HG10022426.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009627	systemic acquired resistance
molecular_function	GO:0005504	fatty acid binding