HG10022335 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10022335
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NAD(P)H dehydrogenase subunit M
Location	Chr05: 23305833 .. 23307800 (-)
RNA-Seq Expression	HG10022335
Synteny	HG10022335

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACAGCAGCAGCTTCATCTTACATGGTGTTTTCTATGGTGGGTTGGAAAAATGGCAAACAAAACACAAAACACACAGCCAAATTTCCCATCTCAGCTCAGATGAATGAAGCTGCAGAGCAACTAAAAGTGGGAGAGGAAGAAGAAGAGGCAAAGCCGAAACAGCGGCCGCTGCGGCCGGTCGAAGTACAGCAGAATGTAAAGAGCAAAAACATGGGGAGAGAATATGGAGGGCAATGGCTTAGCAGTGTAACAAGGCATGTAAGAATATATGCAGCTTATATTGACCCTATTACTTGTGAGTTTGATCAAACTCAAATGGATAAACTTACTCTCATTTTGGATCCAAGCAATGAGTTCCTTTGGAATCCTCAAACTTGCAACAAAGTCTATGCTTACTTCCAAGAGCTTGTGGATCATTATGAGGTATTTTTTTTTTCTCTCCGTTTAGTGTTTTATTGTTGTTCACATCATGGATTAGTTTAGTGGTTTTTGAAAAGGATTCGTGTTAGATTTTGAAATTATTGTTGCATTAAATCAGACGTAGTTGTTAGTAAAATTGTGCTAGCTAATACTATACTAATTGAACCTAATGAATTTATAAATACATTGTTGTGTAACTTTTATTGATTGTTGTTGGTGTCCATACAAAGGTATATATATTTCAATTGACAAAACAACAATTGAAGCACTACGACATTTGGCATTGACATTTTGTAAAATATATTTATTCTAAATAGTAATTGTAGGATGAATTCACAAGATCAAATACACATGATATCATCTTTTTATTACTTAGGTTTCATTTGGTAATTATTTGGTTTTTAGTTTTGAAAATTAAGTGATTTCCTCTCAATTTCTTACAATGGTTTTCATTTTAAGTAAAAGAGTTGAATTCTTAGCCAAAGTTCAAAAATAAAAATAATTTTTTTAAAAACTACTTTAGTTAGTTTTCAAAACTTAGCTTGTAGAAAATAGATAACAAAGCAAGAAATTTAAAAGTAAAAAGAGTATTTATAGGCTTAATTTTCAAAAATTAAAAAAAAAAAAATCGAATAATTACCTAACAAACCTCGGTGAATGGTGGTTGATGAATTTAAAGGCAACAATGTCCAAGAAGTTTAGAGGCAAATTTCCATTAAATTGAGAGGCATAGGATTTTTTTTTAATATTTAAAAAATGCTAAATACAAAAAGTATCCAAATTTTTCCATTTGTTTAAGACATACCTCTATTCTTTTAAAAGTTGCAATATTACTTGACTTTTTTAATCGTTTCAAAACTATCTTTGAAGTAGAAATTTGTGAGAAAAGTGGGACACATAATAATACAACATTAACTTGGAATAGAAATTGAGACTCAAAACCCACAACATTTTGAGTCATCGCCACACCTATTGTATATATATTGTAATTTAGCCCAAGAAAATAAAATAAATAAAATTTAACCACTAGAAAAATTGATTAATTATCTCTTTTGATACGTGTACCCATAGAAAAAAGATTGTTAAAACACCATTTTAGTTCCTATACTTGAGAATTGTTAAATTTTACCCATATACGGGCAAATGTCTAATTTTAATCCCTTTCTATAAATCTTAAATTTAGTCCATCAAAATTAATAAATATACAGACTAGAATTGGATAATACTCAAAGTATAATAATCAAAATGGTATTTAAAAAAAAAAAAAACGATACTTCTATAGAAGACTTTTCTTTAATCTTAGAACATGTACTCTAACAATTATTTTGATTGAGTGTGTTTATTTGTGGAAAGCAGGGAGCTCCATTGACAGAATATACACTTCGGCTAATAGGTTCAGACATAGAACACTATATAAGAAAGATGCTTTATGATGGAGAAATCAAGTACAATATGAATGCAAGAGTCCTCAACTTCAGCATGGGAAAGCCAAGAATTATGTTCAATGCCAATGATCTGCCTCAGGATCTACAATCACAATAA

mRNA sequence

ATGGCAACAGCAGCAGCTTCATCTTACATGGTGTTTTCTATGGTGGGTTGGAAAAATGGCAAACAAAACACAAAACACACAGCCAAATTTCCCATCTCAGCTCAGATGAATGAAGCTGCAGAGCAACTAAAAGTGGGAGAGGAAGAAGAAGAGGCAAAGCCGAAACAGCGGCCGCTGCGGCCGGTCGAAGTACAGCAGAATGTAAAGAGCAAAAACATGGGGAGAGAATATGGAGGGCAATGGCTTAGCAGTGTAACAAGGCATGTAAGAATATATGCAGCTTATATTGACCCTATTACTTGTGAGTTTGATCAAACTCAAATGGATAAACTTACTCTCATTTTGGATCCAAGCAATGAGTTCCTTTGGAATCCTCAAACTTGCAACAAAGTCTATGCTTACTTCCAAGAGCTTGTGGATCATTATGAGGGAGCTCCATTGACAGAATATACACTTCGGCTAATAGGTTCAGACATAGAACACTATATAAGAAAGATGCTTTATGATGGAGAAATCAAGTACAATATGAATGCAAGAGTCCTCAACTTCAGCATGGGAAAGCCAAGAATTATGTTCAATGCCAATGATCTGCCTCAGGATCTACAATCACAATAA

Coding sequence (CDS)

ATGGCAACAGCAGCAGCTTCATCTTACATGGTGTTTTCTATGGTGGGTTGGAAAAATGGCAAACAAAACACAAAACACACAGCCAAATTTCCCATCTCAGCTCAGATGAATGAAGCTGCAGAGCAACTAAAAGTGGGAGAGGAAGAAGAAGAGGCAAAGCCGAAACAGCGGCCGCTGCGGCCGGTCGAAGTACAGCAGAATGTAAAGAGCAAAAACATGGGGAGAGAATATGGAGGGCAATGGCTTAGCAGTGTAACAAGGCATGTAAGAATATATGCAGCTTATATTGACCCTATTACTTGTGAGTTTGATCAAACTCAAATGGATAAACTTACTCTCATTTTGGATCCAAGCAATGAGTTCCTTTGGAATCCTCAAACTTGCAACAAAGTCTATGCTTACTTCCAAGAGCTTGTGGATCATTATGAGGGAGCTCCATTGACAGAATATACACTTCGGCTAATAGGTTCAGACATAGAACACTATATAAGAAAGATGCTTTATGATGGAGAAATCAAGTACAATATGAATGCAAGAGTCCTCAACTTCAGCATGGGAAAGCCAAGAATTATGTTCAATGCCAATGATCTGCCTCAGGATCTACAATCACAATAA

Protein sequence

MATAAASSYMVFSMVGWKNGKQNTKHTAKFPISAQMNEAAEQLKVGEEEEEAKPKQRPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARVLNFSMGKPRIMFNANDLPQDLQSQ

Homology

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BLAST of HG10022335 vs. NCBI nr
Match: XP_008447195.1 (PREDICTED: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis melo] >KAA0041980.1 NAD(P)H-quinone oxidoreductase subunit M [Cucumis melo var. makuwa] >TYK17916.1 NAD(P)H-quinone oxidoreductase subunit M [Cucumis melo var. makuwa])

HSP 1 Score: 381.7 bits (979), Expect = 3.9e-102
Identity = 191/209 (91.39%), Postives = 200/209 (95.69%), Query Frame = 0


Query: 1   MAT-AAASSYMVFSMVGWKNGKQNTKHTAKFPISAQMNEAAEQLKVG---EEEEEAKPKQ 60
           MAT AAASSY++FSMVGWKNGKQNTKHT +FPISAQ+NEAAEQLKVG   E++E+A PK 
Sbjct: 1   MATAAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKP 60

Query: 61  RPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILD 120
            PLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTLILD
Sbjct: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILD 120

Query: 121 PSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180
           PSNEFLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM
Sbjct: 121 PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180

Query: 181 NARVLNFSMGKPRIMFNANDLPQ-DLQSQ 205
           NARVLNFSMGKPRIMFNANDLPQ DLQSQ
Sbjct: 181 NARVLNFSMGKPRIMFNANDLPQDDLQSQ 209

[Close]

BLAST of HG10022335 vs. NCBI nr
Match: KAG7037286.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 379.4 bits (973), Expect = 1.9e-101
Identity = 189/205 (92.20%), Postives = 197/205 (96.10%), Query Frame = 0


Query: 1   MATAAASSYMVFSMVGWKNGKQNTKHTAKFPISAQMNEAAEQLKVGEEEEEAKPK--QRP 60
           MAT AASSYMVFSMVGWKNGKQNT+ +A+FPISAQ NEAAEQLKVGEEEEEAKPK  + P
Sbjct: 1   MAT-AASSYMVFSMVGWKNGKQNTRPSARFPISAQNNEAAEQLKVGEEEEEAKPKPPRSP 60

Query: 61  LRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPS 120
           LRPVE+Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTLILDPS
Sbjct: 61  LRPVEMQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPS 120

Query: 121 NEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 180
           NEFLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA
Sbjct: 121 NEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 180

Query: 181 RVLNFSMGKPRIMFNANDLPQDLQS 204
           RVLNFSMGKPRIMFN+NDLPQDLQS
Sbjct: 181 RVLNFSMGKPRIMFNSNDLPQDLQS 204

[Close]

BLAST of HG10022335 vs. NCBI nr
Match: XP_022940621.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita moschata] >XP_023523685.1 NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6607714.1 NAD(P)H-quinone oxidoreductase subunit M, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 379.4 bits (973), Expect = 1.9e-101
Identity = 189/205 (92.20%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MATAAASSYMVFSMVGWKNGKQNTKHTAKFPISAQMNEAAEQLKVGEEEEEAKPK--QRP 60
           MAT AASSYMVFSMVGWKNGKQNT+ +A+FPISAQ+NEAAEQLKVGEEEEEAKPK    P
Sbjct: 1   MAT-AASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGEEEEEAKPKPPPSP 60

Query: 61  LRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPS 120
           LRPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTLILDPS
Sbjct: 61  LRPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPS 120

Query: 121 NEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 180
           NEFLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA
Sbjct: 121 NEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 180

Query: 181 RVLNFSMGKPRIMFNANDLPQDLQS 204
           RVLNFSMGKPRIMFN+NDLPQDLQS
Sbjct: 181 RVLNFSMGKPRIMFNSNDLPQDLQS 204

[Close]

BLAST of HG10022335 vs. NCBI nr
Match: XP_004139803.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis sativus] >KGN44204.1 hypothetical protein Csa_016125 [Cucumis sativus])

HSP 1 Score: 377.9 bits (969), Expect = 5.7e-101
Identity = 187/207 (90.34%), Postives = 197/207 (95.17%), Query Frame = 0


Query: 2   ATAAASSYMVFSMVGWKNGKQNTKHTAKFPISAQMNEAAEQLKVG---EEEEEAKPKQRP 61
           A AAASSY++FSMVGWKNG QNTKHT +FPISAQ+NEAAEQLK G   E++E+AKPK  P
Sbjct: 3   AAAAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEDQEQAKPKPSP 62

Query: 62  LRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPS 121
           LRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTL+LDPS
Sbjct: 63  LRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLDPS 122

Query: 122 NEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 181
           NEFLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA
Sbjct: 123 NEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 182

Query: 182 RVLNFSMGKPRIMFNANDLPQ-DLQSQ 205
           RVLNFSMGKPRIMFNANDLPQ DLQS+
Sbjct: 183 RVLNFSMGKPRIMFNANDLPQDDLQSK 209

[Close]

BLAST of HG10022335 vs. NCBI nr
Match: XP_038899189.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Benincasa hispida])

HSP 1 Score: 374.8 bits (961), Expect = 4.8e-100
Identity = 184/203 (90.64%), Postives = 190/203 (93.60%), Query Frame = 0


Query: 4   AAASSYMVFSMVGWKNGKQNTKHTAKFPISAQMNEAAEQLKVGEE--EEEAKPKQRPLRP 63
           A ASSYMVF MVGWKN KQNTK   KFPISAQ+NEAAEQL +G++  EE+ KPK  PLRP
Sbjct: 2   ATASSYMVFPMVGWKNSKQNTKPKPKFPISAQINEAAEQLNLGDQQKEEQGKPKPSPLRP 61

Query: 64  VEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSNEF 123
           VE QQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTLILDPSNEF
Sbjct: 62  VEAQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNEF 121

Query: 124 LWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARVL 183
           LWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARVL
Sbjct: 122 LWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARVL 181

Query: 184 NFSMGKPRIMFNANDLPQDLQSQ 205
           NFSMGKPRIMFNANDLPQDLQSQ
Sbjct: 182 NFSMGKPRIMFNANDLPQDLQSQ 204

[Close]

BLAST of HG10022335 vs. ExPASy Swiss-Prot
Match: A7NVJ4 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhM PE=2 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 5.3e-78
Identity = 152/208 (73.08%), Postives = 170/208 (81.73%), Query Frame = 0


Query: 4   AAASSYMV---FSMVGWKNGKQNTKHTAKFPISAQMN---EAAEQLKVGEEEEE---AKP 63
           AA SSY     FSM+GW  GK+  +    F ISAQ     E ++Q+   EEE+E    + 
Sbjct: 2   AATSSYTACTKFSMLGWIGGKRELRKRRAFFISAQQQAEVEESQQVNAQEEEQEKMKQQG 61

Query: 64  KQRPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLI 123
           KQ+  RPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTLI
Sbjct: 62  KQKLPRPVEPQVNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLI 121

Query: 124 LDPSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKY 183
           LDP+NEF+W  +TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRK+LYDGEIKY
Sbjct: 122 LDPTNEFVWTSETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIKY 181

Query: 184 NMNARVLNFSMGKPRIMFNANDLPQDLQ 203
           NMNARVLNFSMGKPRI+FN + LPQ++Q
Sbjct: 182 NMNARVLNFSMGKPRILFN-DGLPQNVQ 208

[Close]

BLAST of HG10022335 vs. ExPASy Swiss-Prot
Match: A9PJQ8 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Populus jackii OX=640484 GN=ndhM PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 8.0e-74
Identity = 143/202 (70.79%), Postives = 160/202 (79.21%), Query Frame = 0


Query: 4   AAASSYMV---FSMVGWKNGKQNTKHTAKFPISAQ-MNEAAEQLKVGEEEEEAKPKQRPL 63
           AA+SSYM    FSM+GW  G++  K      +S Q   E  E  +V  +EEE   +    
Sbjct: 2   AASSSYMACAKFSMLGWLGGRRELKMRRVISVSPQEQAEVQESQEVNAQEEEKVKQPVQP 61

Query: 64  RPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSN 123
           RPVE Q NVKSKNMGREYGGQWLSSVTRHVRIYAAYIDP TCEFDQTQ DKLTLILDP++
Sbjct: 62  RPVEPQVNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPETCEFDQTQTDKLTLILDPTD 121

Query: 124 EFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 183
           EF+W  +TC KVY+YFQELVDHYEGAPLTEYTLRLIGSDIEHYIRK+LYDGEIKYNMNAR
Sbjct: 122 EFVWTDETCYKVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIKYNMNAR 181

Query: 184 VLNFSMGKPRIMFNANDLPQDL 202
           VLNFSMGKPRI+FN +   QD+
Sbjct: 182 VLNFSMGKPRILFNNDGQLQDV 203

[Close]

BLAST of HG10022335 vs. ExPASy Swiss-Prot
Match: Q2V2S7 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhM PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.8e-65
Identity = 119/160 (74.38%), Postives = 140/160 (87.50%), Query Frame = 0


Query: 38  EAAEQLKVGEEEEEAKPKQRPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYID 97
           +  E LK  +  E+ K +  PLRPVE Q NVKSK MG ++GGQWLSSVTRHVRIYAAYID
Sbjct: 47  QETETLKEEQSTEKMKKQPTPLRPVEKQLNVKSKGMG-DFGGQWLSSVTRHVRIYAAYID 106

Query: 98  PITCEFDQTQMDKLTLILDPSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGS 157
           P TCEFDQ+QMDKLTLILDP+ EF+W+ ++CNKVY+YFQELVDHYEGAPLTEYTLRLIGS
Sbjct: 107 PETCEFDQSQMDKLTLILDPTEEFVWDDESCNKVYSYFQELVDHYEGAPLTEYTLRLIGS 166

Query: 158 DIEHYIRKMLYDGEIKYNMNARVLNFSMGKPRIMFNANDL 198
           D+EHYIRKML+DGEI+YNM+ARVLNFSMGKPR+ FN +++
Sbjct: 167 DVEHYIRKMLFDGEIQYNMDARVLNFSMGKPRVQFNTSNI 205

[Close]

BLAST of HG10022335 vs. ExPASy Swiss-Prot
Match: A2XVZ1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=ndhM PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.8e-57
Identity = 109/165 (66.06%), Postives = 131/165 (79.39%), Query Frame = 0


Query: 39  AAEQLKVGEEEEEAK-----PKQRPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYA 98
           A E L    +EEE +      +Q P +P+ VQ   +SKNM REYGGQWLS  TRH+RIYA
Sbjct: 53  AVENLPPPPQEEEQRRERKTRRQGPAQPLPVQPLAESKNMSREYGGQWLSCTTRHIRIYA 112

Query: 99  AYIDPITCEFDQTQMDKLTLILDPSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLR 158
           AYI+P T  FDQTQMDKLTL+LDP++EF+W  +TC KVY  FQ+LVDHYEGA L+EYTLR
Sbjct: 113 AYINPETNAFDQTQMDKLTLLLDPTDEFVWTDETCQKVYDEFQDLVDHYEGAELSEYTLR 172

Query: 159 LIGSDIEHYIRKMLYDGEIKYNMNARVLNFSMGKPRIMFNANDLP 199
           LIGSD+EH+IRK+LYDGEIKYNM +RVLNFSMGKPRI FN++ +P
Sbjct: 173 LIGSDLEHFIRKLLYDGEIKYNMMSRVLNFSMGKPRIKFNSSQIP 217

[Close]

BLAST of HG10022335 vs. ExPASy Swiss-Prot
Match: Q7FB12 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=ndhM PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.8e-57
Identity = 109/165 (66.06%), Postives = 131/165 (79.39%), Query Frame = 0


Query: 39  AAEQLKVGEEEEEAK-----PKQRPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYA 98
           A E L    +EEE +      +Q P +P+ VQ   +SKNM REYGGQWLS  TRH+RIYA
Sbjct: 53  AVENLPPPPQEEEQRRERKTRRQGPAQPLPVQPLAESKNMSREYGGQWLSCTTRHIRIYA 112

Query: 99  AYIDPITCEFDQTQMDKLTLILDPSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLR 158
           AYI+P T  FDQTQMDKLTL+LDP++EF+W  +TC KVY  FQ+LVDHYEGA L+EYTLR
Sbjct: 113 AYINPETNAFDQTQMDKLTLLLDPTDEFVWTDETCQKVYDEFQDLVDHYEGAELSEYTLR 172

Query: 159 LIGSDIEHYIRKMLYDGEIKYNMNARVLNFSMGKPRIMFNANDLP 199
           LIGSD+EH+IRK+LYDGEIKYNM +RVLNFSMGKPRI FN++ +P
Sbjct: 173 LIGSDLEHFIRKLLYDGEIKYNMMSRVLNFSMGKPRIKFNSSQIP 217

[Close]

BLAST of HG10022335 vs. ExPASy TrEMBL
Match: A0A5D3D3P2 (NAD(P)H dehydrogenase subunit M OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002070 PE=3 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.9e-102
Identity = 191/209 (91.39%), Postives = 200/209 (95.69%), Query Frame = 0


Query: 1   MAT-AAASSYMVFSMVGWKNGKQNTKHTAKFPISAQMNEAAEQLKVG---EEEEEAKPKQ 60
           MAT AAASSY++FSMVGWKNGKQNTKHT +FPISAQ+NEAAEQLKVG   E++E+A PK 
Sbjct: 1   MATAAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKP 60

Query: 61  RPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILD 120
            PLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTLILD
Sbjct: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILD 120

Query: 121 PSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180
           PSNEFLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM
Sbjct: 121 PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180

Query: 181 NARVLNFSMGKPRIMFNANDLPQ-DLQSQ 205
           NARVLNFSMGKPRIMFNANDLPQ DLQSQ
Sbjct: 181 NARVLNFSMGKPRIMFNANDLPQDDLQSQ 209

[Close]

BLAST of HG10022335 vs. ExPASy TrEMBL
Match: A0A1S3BGV5 (NAD(P)H dehydrogenase subunit M OS=Cucumis melo OX=3656 GN=LOC103489705 PE=3 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.9e-102
Identity = 191/209 (91.39%), Postives = 200/209 (95.69%), Query Frame = 0


Query: 1   MAT-AAASSYMVFSMVGWKNGKQNTKHTAKFPISAQMNEAAEQLKVG---EEEEEAKPKQ 60
           MAT AAASSY++FSMVGWKNGKQNTKHT +FPISAQ+NEAAEQLKVG   E++E+A PK 
Sbjct: 1   MATAAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKP 60

Query: 61  RPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILD 120
            PLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTLILD
Sbjct: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILD 120

Query: 121 PSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180
           PSNEFLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM
Sbjct: 121 PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180

Query: 181 NARVLNFSMGKPRIMFNANDLPQ-DLQSQ 205
           NARVLNFSMGKPRIMFNANDLPQ DLQSQ
Sbjct: 181 NARVLNFSMGKPRIMFNANDLPQDDLQSQ 209

[Close]

BLAST of HG10022335 vs. ExPASy TrEMBL
Match: A0A6J1FIZ9 (NAD(P)H dehydrogenase subunit M OS=Cucurbita moschata OX=3662 GN=LOC111446160 PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 9.4e-102
Identity = 189/205 (92.20%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MATAAASSYMVFSMVGWKNGKQNTKHTAKFPISAQMNEAAEQLKVGEEEEEAKPK--QRP 60
           MAT AASSYMVFSMVGWKNGKQNT+ +A+FPISAQ+NEAAEQLKVGEEEEEAKPK    P
Sbjct: 1   MAT-AASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGEEEEEAKPKPPPSP 60

Query: 61  LRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPS 120
           LRPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTLILDPS
Sbjct: 61  LRPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPS 120

Query: 121 NEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 180
           NEFLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA
Sbjct: 121 NEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 180

Query: 181 RVLNFSMGKPRIMFNANDLPQDLQS 204
           RVLNFSMGKPRIMFN+NDLPQDLQS
Sbjct: 181 RVLNFSMGKPRIMFNSNDLPQDLQS 204

[Close]

BLAST of HG10022335 vs. ExPASy TrEMBL
Match: A0A0A0K5H1 (NAD(P)H dehydrogenase subunit M OS=Cucumis sativus OX=3659 GN=Csa_7G221360 PE=3 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.7e-101
Identity = 187/207 (90.34%), Postives = 197/207 (95.17%), Query Frame = 0


Query: 2   ATAAASSYMVFSMVGWKNGKQNTKHTAKFPISAQMNEAAEQLKVG---EEEEEAKPKQRP 61
           A AAASSY++FSMVGWKNG QNTKHT +FPISAQ+NEAAEQLK G   E++E+AKPK  P
Sbjct: 3   AAAAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEDQEQAKPKPSP 62

Query: 62  LRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPS 121
           LRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTL+LDPS
Sbjct: 63  LRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLDPS 122

Query: 122 NEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 181
           NEFLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA
Sbjct: 123 NEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 182

Query: 182 RVLNFSMGKPRIMFNANDLPQ-DLQSQ 205
           RVLNFSMGKPRIMFNANDLPQ DLQS+
Sbjct: 183 RVLNFSMGKPRIMFNANDLPQDDLQSK 209

[Close]

BLAST of HG10022335 vs. ExPASy TrEMBL
Match: A0A6J1IX15 (NAD(P)H dehydrogenase subunit M OS=Cucurbita maxima OX=3661 GN=LOC111480680 PE=3 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 5.2e-100
Identity = 183/202 (90.59%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 3   TAAASSYMVFSMVGWKNGKQNTKHTAKFPISAQMNEAAEQLKVGEEEE-EAKPKQRPLRP 62
           + AASSYMVFSMVGWKNGKQNT+ +A+FPISAQ+NEAAEQLKVGEEEE + KP   PLRP
Sbjct: 2   STAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGEEEEAKPKPPLSPLRP 61

Query: 63  VEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSNEF 122
           VE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTLILDPSNEF
Sbjct: 62  VETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNEF 121

Query: 123 LWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARVL 182
           LWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARVL
Sbjct: 122 LWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARVL 181

Query: 183 NFSMGKPRIMFNANDLPQDLQS 204
           NFSMGKPRIMFN+NDLPQDLQS
Sbjct: 182 NFSMGKPRIMFNSNDLPQDLQS 203

[Close]

BLAST of HG10022335 vs. TAIR 10
Match: AT4G37925.1 (subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex )

HSP 1 Score: 250.4 bits (638), Expect = 1.3e-66
Identity = 119/160 (74.38%), Postives = 140/160 (87.50%), Query Frame = 0


Query: 38  EAAEQLKVGEEEEEAKPKQRPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYID 97
           +  E LK  +  E+ K +  PLRPVE Q NVKSK MG ++GGQWLSSVTRHVRIYAAYID
Sbjct: 47  QETETLKEEQSTEKMKKQPTPLRPVEKQLNVKSKGMG-DFGGQWLSSVTRHVRIYAAYID 106

Query: 98  PITCEFDQTQMDKLTLILDPSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGS 157
           P TCEFDQ+QMDKLTLILDP+ EF+W+ ++CNKVY+YFQELVDHYEGAPLTEYTLRLIGS
Sbjct: 107 PETCEFDQSQMDKLTLILDPTEEFVWDDESCNKVYSYFQELVDHYEGAPLTEYTLRLIGS 166

Query: 158 DIEHYIRKMLYDGEIKYNMNARVLNFSMGKPRIMFNANDL 198
           D+EHYIRKML+DGEI+YNM+ARVLNFSMGKPR+ FN +++
Sbjct: 167 DVEHYIRKMLFDGEIQYNMDARVLNFSMGKPRVQFNTSNI 205

The following BLAST results are available for this feature:

BLAST of HG10022335 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447195.1	3.9e-102	91.39	PREDICTED: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis melo...	[more]
KAG7037286.1	1.9e-101	92.20	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic, partial [Cucurbita argy...	[more]
XP_022940621.1	1.9e-101	92.20	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita moschata] >XP...	[more]
XP_004139803.1	5.7e-101	90.34	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis sativus] >KGN44...	[more]
XP_038899189.1	4.8e-100	90.64	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Benincasa hispida]	[more]

BLAST of HG10022335 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7NVJ4	5.3e-78	73.08	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Vitis vinifera OX=297...	[more]
A9PJQ8	8.0e-74	70.79	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Populus jackii OX=640...	[more]
Q2V2S7	1.8e-65	74.38	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Arabidopsis thaliana ...	[more]
A2XVZ1	1.8e-57	66.06	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. i...	[more]
Q7FB12	1.8e-57	66.06	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. j...	[more]

BLAST of HG10022335 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D3P2	1.9e-102	91.39	NAD(P)H dehydrogenase subunit M OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3BGV5	1.9e-102	91.39	NAD(P)H dehydrogenase subunit M OS=Cucumis melo OX=3656 GN=LOC103489705 PE=3 SV=...	[more]
A0A6J1FIZ9	9.4e-102	92.20	NAD(P)H dehydrogenase subunit M OS=Cucurbita moschata OX=3662 GN=LOC111446160 PE...	[more]
A0A0A0K5H1	2.7e-101	90.34	NAD(P)H dehydrogenase subunit M OS=Cucumis sativus OX=3659 GN=Csa_7G221360 PE=3 ...	[more]
A0A6J1IX15	5.2e-100	90.59	NAD(P)H dehydrogenase subunit M OS=Cucurbita maxima OX=3661 GN=LOC111480680 PE=3...	[more]

BLAST of HG10022335 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37925.1	1.3e-66	74.38	subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018922	NAD(P)H-quinone oxidoreductase subunit M	PFAM	PF10664	NdhM	coord: 82..190 e-value: 1.5E-45 score: 153.9
IPR018922	NAD(P)H-quinone oxidoreductase subunit M	PANTHER	PTHR36900	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT M, CHLOROPLASTIC	coord: 3..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10022335.1	HG10022335.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function	GO:0048038	quinone binding