HG10022316 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10022316
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	transcription termination factor MTERF4, chloroplastic
Location	Chr05: 23056826 .. 23058388 (+)
RNA-Seq Expression	HG10022316
Synteny	HG10022316

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCAGAGGCCATGCCGGTGTCGTAAAACCTAATTTTTCCTTCATGTTATTTGAGATGCCTACTCTTCTTGAATGTCAGAAGTTCAAATTTACTGCCACACCAACATTTCAAACGTCTTCTAACCATGAGAAAAGGAGAGGTTTAATTACACAGCTACAATATTCTCATGGTGATAGGAGAACAGTATTCAAATCTCTACATTCAACTGTTTCATCAAAGCCTTGCAATACTAAAGTGGGTAGAAAAGAAGGCAGTGCTTCATCACTATATAGTCGCCCTAGTTTAGTCGAGATGAAGAATGTGAGGCTTGAAAACCGTTCAAAGGTTTACGAGTTCTTGCGTGGAATTGGTGTCGTTCCTGATGAACTTGATGGGCTGGAGCTTCCTGTAACAGTCGATGTTATGAAGGAACGTGTTGATTTTCTTCTCAAATTGGGACTTACAATTGAAGATATAAATAACTACCCTCTTGTTCTTGGCTGCAGTGTTAAGAAAAATATGATACCAGTACTTGATTACCTTGGTAAATTAGGCGTTAGGAAATCTACTTTCACTGAGTTCTTAAAAAGGTATCCGCAAGTCCTCCATTCCAGCGTTGTTGTCGACCTTGCTCCAGTCATCAAGTATCTTCAAGGCATGGATATTAAGCCAACTGATATCCCTCGCGTTCTCGAGAGATATCCAGAAGTATTGGGGTTTAAGCTTGAGGGAACCATGAGTACTTCAGTGGCATACTTGGTAGGAATTGGAGTCGCAAGAAGGGAAATTGGAGGGGTTTTGACCAAATACCCTGAAATTTTGGGAATGAGGGTTGCTCGGGTAATCAAGCCTTTTGTTGAGTATCTTGAAAGTTTGGGCATTCCAAGATTAGCAGTGGCTAGGTTAATAGAGAAACGACCACACATTCTGGGGTTTGGATTAGAAAAAAAAGTCAAACCCAATATCCAATTGCTCTTGGAGTTCAATGTAAGAGAAGCATACCTTTCTTCTATAGTGGCACAGTATGCTGAGATCATAGGAATGGACCTGGAATCTAAGCTTCCAACTCAGAGAAATTTACTAAAATCATTAATTGAATTGAACGACGACAACTTTGGTGCTATCATCGAAAAGATGCCGCAAATTGTTAGCCTCAGCAGTTCAGCTGTGATAAACCATGTAGATTTATTAAAAACTTGTGGGTTTTCCTTGCTTCAAGTAAAGAATATGGTTGTAGGTTGCCCCCAATTGCTTGCTTTGAATATTGACATAATGAAACACAGCTTTGAGTTCTTCCAAATGGATATGGGAAGGCCTTTAGATGACTTAGTCACTTTTCCTGCATTCTTTACTTATGGTTTAGAGTCCACAATAAAGCCCAGACATAAGAAAGTTGTACAGAAGGGAATTAGTTGTTCACTTTCATGGCTCCTCAATTGTTCTGATGAAAAGTTTGCAGAAAGGATGAGCTATGATACCATAGATATGGAGGAGATGGAAACCACACCAACATTCGATATGAATTCTCTCATACAACCTCGTAACGATGAATCGGATTCTGAATACGAAGAGGATAGTTAG

mRNA sequence

ATGATCAGAGGCCATGCCGGTGTCGTAAAACCTAATTTTTCCTTCATGTTATTTGAGATGCCTACTCTTCTTGAATGTCAGAAGTTCAAATTTACTGCCACACCAACATTTCAAACGTCTTCTAACCATGAGAAAAGGAGAGGTTTAATTACACAGCTACAATATTCTCATGGTGATAGGAGAACAGTATTCAAATCTCTACATTCAACTGTTTCATCAAAGCCTTGCAATACTAAAGTGGGTAGAAAAGAAGGCAGTGCTTCATCACTATATAGTCGCCCTAGTTTAGTCGAGATGAAGAATGTGAGGCTTGAAAACCGTTCAAAGGTTTACGAGTTCTTGCGTGGAATTGGTGTCGTTCCTGATGAACTTGATGGGCTGGAGCTTCCTGTAACAGTCGATGTTATGAAGGAACGTGTTGATTTTCTTCTCAAATTGGGACTTACAATTGAAGATATAAATAACTACCCTCTTGTTCTTGGCTGCAGTGTTAAGAAAAATATGATACCAGTACTTGATTACCTTGGTAAATTAGGCGTTAGGAAATCTACTTTCACTGAGTTCTTAAAAAGGTATCCGCAAGTCCTCCATTCCAGCGTTGTTGTCGACCTTGCTCCAGTCATCAAGTATCTTCAAGGCATGGATATTAAGCCAACTGATATCCCTCGCGTTCTCGAGAGATATCCAGAAGTATTGGGGTTTAAGCTTGAGGGAACCATGAGTACTTCAGTGGCATACTTGGTAGGAATTGGAGTCGCAAGAAGGGAAATTGGAGGGGTTTTGACCAAATACCCTGAAATTTTGGGAATGAGGGTTGCTCGGGTAATCAAGCCTTTTGTTGAGTATCTTGAAAGTTTGGGCATTCCAAGATTAGCAGTGGCTAGGTTAATAGAGAAACGACCACACATTCTGGGGTTTGGATTAGAAAAAAAAGTCAAACCCAATATCCAATTGCTCTTGGAGTTCAATGTAAGAGAAGCATACCTTTCTTCTATAGTGGCACAGTATGCTGAGATCATAGGAATGGACCTGGAATCTAAGCTTCCAACTCAGAGAAATTTACTAAAATCATTAATTGAATTGAACGACGACAACTTTGGTGCTATCATCGAAAAGATGCCGCAAATTGTTAGCCTCAGCAGTTCAGCTGTGATAAACCATGTAGATTTATTAAAAACTTGTGGGTTTTCCTTGCTTCAAGTAAAGAATATGGTTGTAGGTTGCCCCCAATTGCTTGCTTTGAATATTGACATAATGAAACACAGCTTTGAGTTCTTCCAAATGGATATGGGAAGGCCTTTAGATGACTTAGTCACTTTTCCTGCATTCTTTACTTATGGTTTAGAGTCCACAATAAAGCCCAGACATAAGAAAGTTGTACAGAAGGGAATTAGTTGTTCACTTTCATGGCTCCTCAATTGTTCTGATGAAAAGTTTGCAGAAAGGATGAGCTATGATACCATAGATATGGAGGAGATGGAAACCACACCAACATTCGATATGAATTCTCTCATACAACCTCGTAACGATGAATCGGATTCTGAATACGAAGAGGATAGTTAG

Coding sequence (CDS)

ATGATCAGAGGCCATGCCGGTGTCGTAAAACCTAATTTTTCCTTCATGTTATTTGAGATGCCTACTCTTCTTGAATGTCAGAAGTTCAAATTTACTGCCACACCAACATTTCAAACGTCTTCTAACCATGAGAAAAGGAGAGGTTTAATTACACAGCTACAATATTCTCATGGTGATAGGAGAACAGTATTCAAATCTCTACATTCAACTGTTTCATCAAAGCCTTGCAATACTAAAGTGGGTAGAAAAGAAGGCAGTGCTTCATCACTATATAGTCGCCCTAGTTTAGTCGAGATGAAGAATGTGAGGCTTGAAAACCGTTCAAAGGTTTACGAGTTCTTGCGTGGAATTGGTGTCGTTCCTGATGAACTTGATGGGCTGGAGCTTCCTGTAACAGTCGATGTTATGAAGGAACGTGTTGATTTTCTTCTCAAATTGGGACTTACAATTGAAGATATAAATAACTACCCTCTTGTTCTTGGCTGCAGTGTTAAGAAAAATATGATACCAGTACTTGATTACCTTGGTAAATTAGGCGTTAGGAAATCTACTTTCACTGAGTTCTTAAAAAGGTATCCGCAAGTCCTCCATTCCAGCGTTGTTGTCGACCTTGCTCCAGTCATCAAGTATCTTCAAGGCATGGATATTAAGCCAACTGATATCCCTCGCGTTCTCGAGAGATATCCAGAAGTATTGGGGTTTAAGCTTGAGGGAACCATGAGTACTTCAGTGGCATACTTGGTAGGAATTGGAGTCGCAAGAAGGGAAATTGGAGGGGTTTTGACCAAATACCCTGAAATTTTGGGAATGAGGGTTGCTCGGGTAATCAAGCCTTTTGTTGAGTATCTTGAAAGTTTGGGCATTCCAAGATTAGCAGTGGCTAGGTTAATAGAGAAACGACCACACATTCTGGGGTTTGGATTAGAAAAAAAAGTCAAACCCAATATCCAATTGCTCTTGGAGTTCAATGTAAGAGAAGCATACCTTTCTTCTATAGTGGCACAGTATGCTGAGATCATAGGAATGGACCTGGAATCTAAGCTTCCAACTCAGAGAAATTTACTAAAATCATTAATTGAATTGAACGACGACAACTTTGGTGCTATCATCGAAAAGATGCCGCAAATTGTTAGCCTCAGCAGTTCAGCTGTGATAAACCATGTAGATTTATTAAAAACTTGTGGGTTTTCCTTGCTTCAAGTAAAGAATATGGTTGTAGGTTGCCCCCAATTGCTTGCTTTGAATATTGACATAATGAAACACAGCTTTGAGTTCTTCCAAATGGATATGGGAAGGCCTTTAGATGACTTAGTCACTTTTCCTGCATTCTTTACTTATGGTTTAGAGTCCACAATAAAGCCCAGACATAAGAAAGTTGTACAGAAGGGAATTAGTTGTTCACTTTCATGGCTCCTCAATTGTTCTGATGAAAAGTTTGCAGAAAGGATGAGCTATGATACCATAGATATGGAGGAGATGGAAACCACACCAACATTCGATATGAATTCTCTCATACAACCTCGTAACGATGAATCGGATTCTGAATACGAAGAGGATAGTTAG

Protein sequence

MIRGHAGVVKPNFSFMLFEMPTLLECQKFKFTATPTFQTSSNHEKRRGLITQLQYSHGDRRTVFKSLHSTVSSKPCNTKVGRKEGSASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPTDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLESKLPTQRNLLKSLIELNDDNFGAIIEKMPQIVSLSSSAVINHVDLLKTCGFSLLQVKNMVVGCPQLLALNIDIMKHSFEFFQMDMGRPLDDLVTFPAFFTYGLESTIKPRHKKVVQKGISCSLSWLLNCSDEKFAERMSYDTIDMEEMETTPTFDMNSLIQPRNDESDSEYEEDS

Homology

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BLAST of HG10022316 vs. NCBI nr
Match: XP_038890870.1 (transcription termination factor MTERF4, chloroplastic [Benincasa hispida] >XP_038890871.1 transcription termination factor MTERF4, chloroplastic [Benincasa hispida])

HSP 1 Score: 953.0 bits (2462), Expect = 1.1e-273
Identity = 485/520 (93.27%), Postives = 500/520 (96.15%), Query Frame = 0


Query: 1   MIRGHAGVVKPNFSFMLFEMPTLLECQKFKFTATPTFQTSSNHEKRRGLITQLQYSHGDR 60
           MIRGHAGV+KP+FSFM+FEMPT LEC KFK TA  TFQ  SN+EKRRGLIT+LQYSHGDR
Sbjct: 1   MIRGHAGVLKPSFSFMIFEMPT-LECHKFKITAPSTFQMPSNYEKRRGLITKLQYSHGDR 60

Query: 61  RTVFKSLHSTVSSKPCNTKVGRKEGSASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVV 120
           RTVFKSLHST+SSKP N +VGRKE  ASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVV
Sbjct: 61  RTVFKSLHSTISSKPYNAQVGRKEDKASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVV 120

Query: 121 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV 180
           PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV
Sbjct: 121 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV 180

Query: 181 RKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPTDIPRVLERYPEVLGFKLEGTM 240
           RKSTFTEFLKRYPQVLHSSVVVDLAPV+KYLQGMDIKP DIPR+LERYPEVLGFKLEGTM
Sbjct: 181 RKSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPNDIPRILERYPEVLGFKLEGTM 240

Query: 241 STSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKR 300
           STSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKR
Sbjct: 241 STSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKR 300

Query: 301 PHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLESKLPTQRNLLKSLIE 360
           PHILGFGLEK VKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLE KL TQRNLLKSLIE
Sbjct: 301 PHILGFGLEKNVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLEGKLQTQRNLLKSLIE 360

Query: 361 LNDDNFGAIIEKMPQIVSLSSSAVINHVDLLKTCGFSLLQVKNMVVGCPQLLALNIDIMK 420
           L+DDNFGAIIEKMPQIVSLSSSAVINHVD LKTCGFSLLQVKNMV+GCPQLLALNIDIMK
Sbjct: 361 LDDDNFGAIIEKMPQIVSLSSSAVINHVDFLKTCGFSLLQVKNMVIGCPQLLALNIDIMK 420

Query: 421 HSFEFFQMDMGRPLDDLVTFPAFFTYGLESTIKPRHKKVVQKGISCSLSWLLNCSDEKFA 480
           HSFEFF MDMGRPL+DLV FPAFFTYGLESTIKPRH+KVVQKGISCSLSWLLNCSDEKF 
Sbjct: 421 HSFEFFHMDMGRPLEDLVAFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFV 480

Query: 481 ERMSYDTIDMEEMETTPTFDMNSLIQPRNDESDSEYEEDS 521
           ERMSYDTIDMEEMET PTFDMNSLIQP+N+ESDSEYEEDS
Sbjct: 481 ERMSYDTIDMEEMETIPTFDMNSLIQPQNNESDSEYEEDS 519

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BLAST of HG10022316 vs. NCBI nr
Match: XP_008465763.1 (PREDICTED: transcription termination factor MTERF4, chloroplastic [Cucumis melo] >XP_008465764.1 PREDICTED: transcription termination factor MTERF4, chloroplastic [Cucumis melo] >KAA0066609.1 transcription termination factor MTERF4 [Cucumis melo var. makuwa] >TYK14207.1 transcription termination factor MTERF4 [Cucumis melo var. makuwa])

HSP 1 Score: 941.4 bits (2432), Expect = 3.3e-270
Identity = 482/521 (92.51%), Postives = 497/521 (95.39%), Query Frame = 0


Query: 1   MIRGHAGVVKPNFSFMLFEMPTLLECQKFKFTATPTFQTSSNHEKRRGLITQLQYSHGDR 60
           MIRGHAGVVKPN SFMLFEM T LEC  FKFTATPTF TS  HEKRR L TQLQYSHGDR
Sbjct: 1   MIRGHAGVVKPNVSFMLFEMST-LECHNFKFTATPTFLTSCIHEKRRCLTTQLQYSHGDR 60

Query: 61  RTVFKSLHSTVSSKPCNTKVGRKEGSA-SSLYSRPSLVEMKNVRLENRSKVYEFLRGIGV 120
           RTVFKSLHST+SSKP ++KVGRK GS+ SSLYSRPSLVEMKNVRLENRSKVYEFLRGIGV
Sbjct: 61  RTVFKSLHSTISSKPYSSKVGRKGGSSGSSLYSRPSLVEMKNVRLENRSKVYEFLRGIGV 120

Query: 121 VPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLG 180
           VPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLG
Sbjct: 121 VPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLG 180

Query: 181 VRKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPTDIPRVLERYPEVLGFKLEGT 240
           VRKSTFTEFLKRYPQVLHSSVVVDLAPV+KYLQGMDIKP DIPRVLERYPEVLGFKLEGT
Sbjct: 181 VRKSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGT 240

Query: 241 MSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEK 300
           MSTSVAYLVGIGVARREIGG+LTKYPEILGMRVARVIKPFVEYLE LGIPRLAVARLIEK
Sbjct: 241 MSTSVAYLVGIGVARREIGGILTKYPEILGMRVARVIKPFVEYLEGLGIPRLAVARLIEK 300

Query: 301 RPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLESKLPTQRNLLKSLI 360
           RPHILGFGLEKKVKPNIQLLLEF VREAYL SIVAQYAEIIGMDLE+ L TQRNLLKSLI
Sbjct: 301 RPHILGFGLEKKVKPNIQLLLEFKVREAYLPSIVAQYAEIIGMDLEANLQTQRNLLKSLI 360

Query: 361 ELNDDNFGAIIEKMPQIVSLSSSAVINHVDLLKTCGFSLLQVKNMVVGCPQLLALNIDIM 420
           EL++DNFG IIEKMPQIVSLS SAVINHVD LKTCGFSLLQVKNMV+GCPQLLALNIDIM
Sbjct: 361 ELDNDNFGTIIEKMPQIVSLSRSAVINHVDFLKTCGFSLLQVKNMVIGCPQLLALNIDIM 420

Query: 421 KHSFEFFQMDMGRPLDDLVTFPAFFTYGLESTIKPRHKKVVQKGISCSLSWLLNCSDEKF 480
           KHSFEFFQM+MGRPL+DL TFPAFFTYGLESTIKPRH+KVVQKGISCSLSWLLNC+DEKF
Sbjct: 421 KHSFEFFQMEMGRPLEDLATFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCADEKF 480

Query: 481 AERMSYDTIDMEEMETTPTFDMNSLIQPRNDESDSEYEEDS 521
            ERMSYDTIDMEEMETTPTFDMNSL+QPRNDESDSEYEEDS
Sbjct: 481 VERMSYDTIDMEEMETTPTFDMNSLVQPRNDESDSEYEEDS 520

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BLAST of HG10022316 vs. NCBI nr
Match: XP_004143818.1 (transcription termination factor MTERF4, chloroplastic [Cucumis sativus] >KGN51142.1 hypothetical protein Csa_008517 [Cucumis sativus])

HSP 1 Score: 936.0 bits (2418), Expect = 1.4e-268
Identity = 479/521 (91.94%), Postives = 494/521 (94.82%), Query Frame = 0


Query: 1   MIRGHAGVVKPNFSFMLFEMPTLLECQKFKFTATPTFQTSSNHEKRRGLITQLQYSHGDR 60
           MIRGHAGV KPNFS MLFEM T LEC  FKFTAT TFQ   NHEKR+GLITQLQYSHGDR
Sbjct: 1   MIRGHAGVAKPNFSLMLFEMST-LECHNFKFTATRTFQMPYNHEKRKGLITQLQYSHGDR 60

Query: 61  RTVFKSLHSTVSSKPCNTKVGRKEGS-ASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGV 120
           RTVFKSLHST+SSK  ++KV RKEGS  SSLYSRPSLVEMKNVRLENRSKVYEFLRGIGV
Sbjct: 61  RTVFKSLHSTISSKSYSSKVDRKEGSIGSSLYSRPSLVEMKNVRLENRSKVYEFLRGIGV 120

Query: 121 VPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLG 180
           VPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPL+LGCSVKKNMIPVLDYLGKLG
Sbjct: 121 VPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLILGCSVKKNMIPVLDYLGKLG 180

Query: 181 VRKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPTDIPRVLERYPEVLGFKLEGT 240
           VRKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKP DIPRVLERYPEVLGFKLEGT
Sbjct: 181 VRKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPNDIPRVLERYPEVLGFKLEGT 240

Query: 241 MSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEK 300
           MSTSVAYLVGIGV RREIGGVLTKYPEILGMRVARVIKPFVEYLE LGIPRLAVARLIEK
Sbjct: 241 MSTSVAYLVGIGVTRREIGGVLTKYPEILGMRVARVIKPFVEYLEGLGIPRLAVARLIEK 300

Query: 301 RPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLESKLPTQRNLLKSLI 360
           RPHILGFGLEKKVKPNIQLLLEF VREAYL SIVAQYAEIIG+DLE+ L TQRNLLKSLI
Sbjct: 301 RPHILGFGLEKKVKPNIQLLLEFKVREAYLPSIVAQYAEIIGIDLEANLQTQRNLLKSLI 360

Query: 361 ELNDDNFGAIIEKMPQIVSLSSSAVINHVDLLKTCGFSLLQVKNMVVGCPQLLALNIDIM 420
           EL++DNFG IIEKMPQ+VSLS SAVINHVD LKTCGFSLLQVKNMV+GCPQLLALNIDIM
Sbjct: 361 ELDNDNFGTIIEKMPQVVSLSRSAVINHVDFLKTCGFSLLQVKNMVIGCPQLLALNIDIM 420

Query: 421 KHSFEFFQMDMGRPLDDLVTFPAFFTYGLESTIKPRHKKVVQKGISCSLSWLLNCSDEKF 480
           KHSFEFFQM+MGRPL+DL TFPAFFTYGLESTIKPRH+KVVQKGISCSLSWLLNC+DEKF
Sbjct: 421 KHSFEFFQMEMGRPLEDLATFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCADEKF 480

Query: 481 AERMSYDTIDMEEMETTPTFDMNSLIQPRNDESDSEYEEDS 521
            ERMSYDTIDMEEMETTPTFDMNSLIQPRNDESDSEYEEDS
Sbjct: 481 MERMSYDTIDMEEMETTPTFDMNSLIQPRNDESDSEYEEDS 520

[Close]

BLAST of HG10022316 vs. NCBI nr
Match: XP_023538106.1 (transcription termination factor MTERF4, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023538107.1 transcription termination factor MTERF4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 926.8 bits (2394), Expect = 8.3e-266
Identity = 466/520 (89.62%), Postives = 497/520 (95.58%), Query Frame = 0


Query: 1   MIRGHAGVVKPNFSFMLFEMPTLLECQKFKFTATPTFQTSSNHEKRRGLITQLQYSHGDR 60
           MIRGH GVVKPNFS ML EMPT L+CQKFKF  T TFQTS NHEKRRGLIT+LQYS GDR
Sbjct: 2   MIRGHTGVVKPNFSIMLLEMPT-LKCQKFKFITTSTFQTSPNHEKRRGLITKLQYSRGDR 61

Query: 61  RTVFKSLHSTVSSKPCNTKVGRKEGSASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVV 120
           RTV KSLHST++SKP ++KV RKEGSASSLYSRPSLVEMKNVR ENR+KVYEFLRGIG+V
Sbjct: 62  RTVSKSLHSTITSKPYSSKVSRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIV 121

Query: 121 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV 180
           PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGV
Sbjct: 122 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGV 181

Query: 181 RKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPTDIPRVLERYPEVLGFKLEGTM 240
           RKSTFTEFL+RYPQVLHSSVVVDL PV+KYLQGMDIKP+DIPRVLERYPEVLGFKLEGTM
Sbjct: 182 RKSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTM 241

Query: 241 STSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKR 300
           STSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKR
Sbjct: 242 STSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKR 301

Query: 301 PHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLESKLPTQRNLLKSLIE 360
           PHILGFGLEK+VKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLE+KLP+QRNLLKS+IE
Sbjct: 302 PHILGFGLEKRVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIE 361

Query: 361 LNDDNFGAIIEKMPQIVSLSSSAVINHVDLLKTCGFSLLQVKNMVVGCPQLLALNIDIMK 420
           L++DNFG IIEKMPQ+VSLSSSAV +HVD LK+CGFSL QVKNMV+GCPQLLALN+DIMK
Sbjct: 362 LDNDNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMK 421

Query: 421 HSFEFFQMDMGRPLDDLVTFPAFFTYGLESTIKPRHKKVVQKGISCSLSWLLNCSDEKFA 480
           HSF+FFQ +MGRPLDDLV FPAFFTYGLESTIKPRH+KVVQKG++CSLSWLLNCSDEKFA
Sbjct: 422 HSFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFA 481

Query: 481 ERMSYDTIDMEEMETTPTFDMNSLIQPRNDESDSEYEEDS 521
           ERM+YDTIDMEEMET PTFDM+SL QPR DESDS+YEEDS
Sbjct: 482 ERMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDS 520

[Close]

BLAST of HG10022316 vs. NCBI nr
Match: XP_022938209.1 (transcription termination factor MTERF4, chloroplastic [Cucurbita moschata] >XP_022938210.1 transcription termination factor MTERF4, chloroplastic [Cucurbita moschata] >XP_022938211.1 transcription termination factor MTERF4, chloroplastic [Cucurbita moschata])

HSP 1 Score: 923.7 bits (2386), Expect = 7.0e-265
Identity = 465/520 (89.42%), Postives = 496/520 (95.38%), Query Frame = 0


Query: 1   MIRGHAGVVKPNFSFMLFEMPTLLECQKFKFTATPTFQTSSNHEKRRGLITQLQYSHGDR 60
           MIRGH GVVKPNFS ML EMPT L+C KFKF  T TFQTS NHEKRRGLIT+LQYS GD 
Sbjct: 2   MIRGHTGVVKPNFSIMLLEMPT-LKCHKFKFDTTSTFQTSPNHEKRRGLITKLQYSRGDW 61

Query: 61  RTVFKSLHSTVSSKPCNTKVGRKEGSASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVV 120
           RTV KSLHST++SKP ++KVGRKEGSASSLYSRPSLVEMKNVR ENR+KVYEFLRGIG+V
Sbjct: 62  RTVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIV 121

Query: 121 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV 180
           PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGV
Sbjct: 122 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGV 181

Query: 181 RKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPTDIPRVLERYPEVLGFKLEGTM 240
           RKSTFTEFL+RYPQVLHSSVVVDL PV+KYLQGMDIKP+DIPRVLERYPEVLGFKLEGTM
Sbjct: 182 RKSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTM 241

Query: 241 STSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKR 300
           STSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKR
Sbjct: 242 STSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKR 301

Query: 301 PHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLESKLPTQRNLLKSLIE 360
           PHILGFGLEK+VKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLE+KLP+QRNLLKS+IE
Sbjct: 302 PHILGFGLEKRVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIE 361

Query: 361 LNDDNFGAIIEKMPQIVSLSSSAVINHVDLLKTCGFSLLQVKNMVVGCPQLLALNIDIMK 420
           L++DNFG IIEKMPQ+VSLSSSAV +HVD LK+CGFSL QVKNMV+GCPQLLALN+DIMK
Sbjct: 362 LDNDNFGTIIEKMPQVVSLSSSAVNSHVDCLKSCGFSLQQVKNMVIGCPQLLALNLDIMK 421

Query: 421 HSFEFFQMDMGRPLDDLVTFPAFFTYGLESTIKPRHKKVVQKGISCSLSWLLNCSDEKFA 480
           HSF+FFQ +MGRPLDDLV FPAFFTYGLESTIKPRH+KVVQKG++CSLSWLLNCSDEKFA
Sbjct: 422 HSFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFA 481

Query: 481 ERMSYDTIDMEEMETTPTFDMNSLIQPRNDESDSEYEEDS 521
           ERM+YDTIDMEEMET PTFDM+SL QPR DESDS+YEEDS
Sbjct: 482 ERMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDS 520

[Close]

BLAST of HG10022316 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 689.1 bits (1777), Expect = 3.8e-197
Identity = 358/531 (67.42%), Postives = 425/531 (80.04%), Query Frame = 0


Query: 2   IRGHAGVVKPNFSFMLFEMPTLLECQKFKFTATPTFQTSSNHEKR--RGLITQLQYSHGD 61
           IR   G  KP F  + FE P+    +  +  +  T+    NH+KR   G+   +Q +  +
Sbjct: 3   IRFCNGFTKPGFLLVHFEPPSFFAVRS-RSLSDSTYGNLCNHKKRPGTGIGLTVQCAIAN 62

Query: 62  RRTVFKSLHS--TVSSKPCNTKVGR-------KEGSASSLYSRPSLVEMKNVRLENRSKV 121
           RR   +SL S     S   ++  GR       K   + SLYSRPSL++M   +  NR+KV
Sbjct: 63  RRFSSRSLDSPRRERSSRSSSSSGRDRDRDKDKGRDSKSLYSRPSLLDMNKEKAANRAKV 122

Query: 122 YEFLRGIGVVPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIP 181
           YEFLRGIG+VPDELDGLELPVT DVMKERV+FL KLGLTIEDINNYPLVLGCSVKKNM+P
Sbjct: 123 YEFLRGIGIVPDELDGLELPVTADVMKERVEFLHKLGLTIEDINNYPLVLGCSVKKNMVP 182

Query: 182 VLDYLGKLGVRKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPTDIPRVLERYPE 241
           VLDYLGKLGVRKSTFTEFL+RYPQVLHSSVV+DLAPV+KYLQG+DIKP+D+PRVLERYPE
Sbjct: 183 VLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVIDLAPVVKYLQGLDIKPSDVPRVLERYPE 242

Query: 242 VLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPR 301
           VLGFKLEGTMSTSVAYLVGIGVARREIGG+LT+YPEILGMRVAR+IKP VEYLE LGIPR
Sbjct: 243 VLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEILGMRVARIIKPLVEYLEVLGIPR 302

Query: 302 LAVARLIEKRPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLESKLPT 361
           LA ARLIEKRPHILGF L+  VKPN+Q+L +FNVRE  L SI+AQY EIIG+DL+ KL T
Sbjct: 303 LAAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLPSIIAQYPEIIGIDLKPKLDT 362

Query: 362 QRNLLKSLIELNDDNFGAIIEKMPQIVSLSSSAVINHVDLLKTCGFSLLQVKNMVVGCPQ 421
           QR LL S I LN ++ G++IE+MPQ VSLS S ++ H+D L  CGFS+ Q + MV+GCPQ
Sbjct: 363 QRKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLKHIDFLTKCGFSIDQTREMVIGCPQ 422

Query: 422 LLALNIDIMKHSFEFFQMDMGRPLDDLVTFPAFFTYGLESTIKPRHKKVVQKGISCSLSW 481
           +LALN+ IMK SFE+FQ +M RPL DLV FPAFFTYGLEST+KPRHKK+++KGI CSL+W
Sbjct: 423 VLALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKKIIKKGIKCSLAW 482

Query: 482 LLNCSDEKFAERMSYDTIDMEEMETTP-TFDMNSLIQP-RNDESDSEYEED 520
           +LNCSDEKF +RMSYDTID+EE+ET P +FDMN+L+QP R +ESDSEYEE+
Sbjct: 483 MLNCSDEKFEQRMSYDTIDIEEVETDPSSFDMNTLMQPEREEESDSEYEEE 532

[Close]

BLAST of HG10022316 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 567.4 bits (1461), Expect = 1.7e-160
Identity = 277/435 (63.68%), Postives = 354/435 (81.38%), Query Frame = 0


Query: 87  ASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVPDELDGLELPVTVDVMKERVDFLLKL 146
           +SSLY+RPSL++M+  R   R+ V  FL  +GV P EL GLELP TVDVM+ERV+FL  L
Sbjct: 63  SSSLYARPSLLDMERGRAARRADVDAFLASLGVDPGELAGLELPATVDVMRERVEFLHSL 122

Query: 147 GLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLKRYPQVLHSSVVVDLAP 206
            L+ ED+  YPL LGCSV+KNM+PVLDYLGKLGVR+    + L+RYPQVLH+SVVVDLAP
Sbjct: 123 DLSNEDLAAYPLALGCSVRKNMVPVLDYLGKLGVRQDALPDLLRRYPQVLHASVVVDLAP 182

Query: 207 VIKYLQGMDIKPTDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPE 266
           V+KYLQGMD++P D+PRVLERYPE+LGFKLEGTMSTS+AYLVGIGVARR++G V+T++PE
Sbjct: 183 VVKYLQGMDVRPHDVPRVLERYPELLGFKLEGTMSTSIAYLVGIGVARRQVGSVITRFPE 242

Query: 267 ILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQLLLEFNVRE 326
           +LGMRV ++IKPFVE+LE +G+ RLA+AR+IEK+P++LGFGLE KVKPNI+ LLEF VR+
Sbjct: 243 VLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLEDKVKPNIEALLEFGVRK 302

Query: 327 AYLSSIVAQYAEIIGMDLESKLPTQRNLLKSLIELNDDNFGAIIEKMPQIVSLSSSAVIN 386
             L+ IVAQY +I+G++L  KL TQ++L +S I ++ ++FG +IE+MPQ +SL  +AV+ 
Sbjct: 303 EALAFIVAQYPDILGIELRDKLATQQSLFESSILVSSEDFGRVIERMPQAISLGRTAVLK 362

Query: 387 HVDLLKTCGFSLLQVKNMVVGCPQLLALNIDIMKHSFEFFQMDMGRPLDDLVTFPAFFTY 446
           HV+ L +CGF L QV  MVV CPQLLALN+DIMK SFE+FQ +M R L++LV FPAFFTY
Sbjct: 363 HVNFLTSCGFLLSQVSKMVVACPQLLALNMDIMKMSFEYFQNEMERDLEELVEFPAFFTY 422

Query: 447 GLESTIKPRHKKVVQKGISCSLSWLLNCSDEKFAERMSYDTIDMEEMETTPTFDMNSLIQ 506
           GLEST++PRH+ V +KG +CSL+WLLNCSD KF ERM YDTI +EEME   +FD N+L +
Sbjct: 423 GLESTVRPRHEMVAKKGFTCSLAWLLNCSDAKFDERMKYDTIGIEEMEVDNSFDTNTLSE 482

Query: 507 PRNDE-SDSEYEEDS 521
              DE  D + +EDS
Sbjct: 483 RVEDEVEDEDLDEDS 497

[Close]

BLAST of HG10022316 vs. ExPASy Swiss-Prot
Match: B6TGN4 (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 6.0e-158
Identity = 270/434 (62.21%), Postives = 353/434 (81.34%), Query Frame = 0


Query: 87  ASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVPDELDGLELPVTVDVMKERVDFLLKL 146
           +SSLY+RPSL++M+  R   R+ V  FL  +GV P EL GLELPVTVDVM+ER +FL  L
Sbjct: 54  SSSLYARPSLLDMERDRATRRADVDAFLTSLGVDPGELAGLELPVTVDVMRERAEFLGSL 113

Query: 147 GLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLKRYPQVLHSSVVVDLAP 206
           GLT ED+  YPL LGCSV+KNM+PVLDYLGKLGVR+    + L+RYPQVLH+SVVVDLAP
Sbjct: 114 GLTQEDLAAYPLALGCSVRKNMVPVLDYLGKLGVRRDALPDLLRRYPQVLHASVVVDLAP 173

Query: 207 VIKYLQGMDIKPTDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPE 266
           V+KYLQGMD++PTD+PRVLERYPE+LGFKLEGTMSTSVAYLVGIGV RR++G V+T++PE
Sbjct: 174 VVKYLQGMDVRPTDVPRVLERYPELLGFKLEGTMSTSVAYLVGIGVGRRQVGSVITRFPE 233

Query: 267 ILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQLLLEFNVRE 326
           +LGMRV ++IKPFVE+LE +G+ RLA+AR+IEK+P++LGFGL++KVKPNI+ L++  VR+
Sbjct: 234 VLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLQEKVKPNIEALVDIGVRK 293

Query: 327 AYLSSIVAQYAEIIGMDLESKLPTQRNLLKSLIELNDDNFGAIIEKMPQIVSLSSSAVIN 386
             L+SIV QY +++G++L  KL  Q++L +S I ++ ++FG ++E+MPQ +SL  +AV+ 
Sbjct: 294 EALASIVMQYPDVLGLELRDKLVAQQSLFESSILVSREDFGRVLERMPQAISLGRAAVLK 353

Query: 387 HVDLLKTCGFSLLQVKNMVVGCPQLLALNIDIMKHSFEFFQMDMGRPLDDLVTFPAFFTY 446
           HV+ L  CGF L QV  MVV CPQLLALNIDIM+ +FE+F+ +M R L++LV FPAFFTY
Sbjct: 354 HVNFLTACGFMLSQVSKMVVACPQLLALNIDIMRMNFEYFKNEMERDLEELVEFPAFFTY 413

Query: 447 GLESTIKPRHKKVVQKGISCSLSWLLNCSDEKFAERMSYDTIDMEEMETTPTFDMNSLIQ 506
           G+EST++PRH+ V +KG++CSL+WLLNCSD KF ERM YDTI +EEME   + DMN+ + 
Sbjct: 414 GIESTVRPRHEMVSRKGLTCSLAWLLNCSDAKFDERMKYDTIGVEEMEREDSSDMNASV- 473

Query: 507 PRNDESDSEYEEDS 521
              DE +SE  EDS
Sbjct: 474 ---DEVESEEYEDS 483

[Close]

BLAST of HG10022316 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.3e-32
Identity = 91/363 (25.07%), Postives = 173/363 (47.66%), Query Frame = 0


Query: 165 KKNMIPVLDYLGKLGVRKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPTDIPRV 224
           ++ +  +++YL   GVR+      + R P++L  S + ++   + +   M +   D   +
Sbjct: 278 REELNEIVEYLESNGVRRDWMGYVVGRCPELLSFS-MEEVKSRVDFFLKMGMNQNDFGTM 337

Query: 225 LERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLE 284
           +  YP+++GF     M   + YL   G++  E+G +L   P ++G  +    KP V+Y  
Sbjct: 338 VYDYPKIIGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFY 397

Query: 285 SLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDL 344
            LGIP+  + R++  +P +    LEK + P ++ L E  +    + +++ ++  ++   L
Sbjct: 398 YLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSL 457

Query: 345 ESKLPTQRNLLKSLIELNDDNFGAIIEKMPQIVSLSSSAVIN-HVDLLKTCGFSLLQVKN 404
             K+      L +   +   + G +I   P ++  S    +  ++    + G    Q+  
Sbjct: 458 YKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGE 517

Query: 405 MVVGCPQLLALNIDIMKHSFEFFQMDMGRPLDDLVTFPAFFTYGLESTIKPRHKKVVQKG 464
           M+   P LL  N+D ++  + + +  M RPL DL+ FP FF+Y LE  I PRH  +V+  
Sbjct: 518 MIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENR 577

Query: 465 ISCSLSWLLNCSDEKFAERMSYDTIDMEE-------METTPTFDMNSLIQPRNDESDSEY 520
           ++  L ++L C+DE+F ER   D ++  E        E +   D N   Q      ++E 
Sbjct: 578 VNFKLRYMLACTDEEF-ERRVRDKVERRERFEAGLDSEDSQPSDENISDQEIAFSDEAEE 637

[Close]

BLAST of HG10022316 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.5e-31
Identity = 69/276 (25.00%), Postives = 146/276 (52.90%), Query Frame = 0


Query: 216 IKPTDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARV 275
           I+   +P ++ R P++L  +L+  +   V  L  +G   RE+   +TK+P IL   V   
Sbjct: 54  IQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEK 113

Query: 276 IKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQLLLEFNV-REAYLSSIVA 335
           + P + + ++LG+P   + ++I   P ++ + ++ K+   +  L    + ++  +  ++ 
Sbjct: 114 LCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLV 173

Query: 336 QYAEIIGMDLESKLPTQRNLLKSLIELNDDNFGAIIEKMPQIVSLSSSAVIN-HVDLLKT 395
           +   ++G  ++ +L      LKS + L++D   +++   PQ++    + ++  + D LK 
Sbjct: 174 KNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKE 233

Query: 396 CGFSLLQVKNMVVGCPQLLALNI-DIMKHSFEFFQMDMGRPLDDLVTFPAFFTYGLESTI 455
           CGF   Q+  MV G PQ+L  ++ + ++    F    MGR +D++ ++P FF +GL+  +
Sbjct: 234 CGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKV 293

Query: 456 KPRHKKVVQKGISCSLSWLLNCSDEKFAERMSYDTI 489
           + R K V +  I CSL  +L+C+ +KF E+  +  +
Sbjct: 294 ESRFKLVKKNNIDCSLREMLDCNTKKFHEKFGFSEV 329

[Close]

BLAST of HG10022316 vs. ExPASy TrEMBL
Match: A0A1S3CR33 (transcription termination factor MTERF4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503367 PE=3 SV=1)

HSP 1 Score: 941.4 bits (2432), Expect = 1.6e-270
Identity = 482/521 (92.51%), Postives = 497/521 (95.39%), Query Frame = 0


Query: 1   MIRGHAGVVKPNFSFMLFEMPTLLECQKFKFTATPTFQTSSNHEKRRGLITQLQYSHGDR 60
           MIRGHAGVVKPN SFMLFEM T LEC  FKFTATPTF TS  HEKRR L TQLQYSHGDR
Sbjct: 1   MIRGHAGVVKPNVSFMLFEMST-LECHNFKFTATPTFLTSCIHEKRRCLTTQLQYSHGDR 60

Query: 61  RTVFKSLHSTVSSKPCNTKVGRKEGSA-SSLYSRPSLVEMKNVRLENRSKVYEFLRGIGV 120
           RTVFKSLHST+SSKP ++KVGRK GS+ SSLYSRPSLVEMKNVRLENRSKVYEFLRGIGV
Sbjct: 61  RTVFKSLHSTISSKPYSSKVGRKGGSSGSSLYSRPSLVEMKNVRLENRSKVYEFLRGIGV 120

Query: 121 VPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLG 180
           VPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLG
Sbjct: 121 VPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLG 180

Query: 181 VRKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPTDIPRVLERYPEVLGFKLEGT 240
           VRKSTFTEFLKRYPQVLHSSVVVDLAPV+KYLQGMDIKP DIPRVLERYPEVLGFKLEGT
Sbjct: 181 VRKSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGT 240

Query: 241 MSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEK 300
           MSTSVAYLVGIGVARREIGG+LTKYPEILGMRVARVIKPFVEYLE LGIPRLAVARLIEK
Sbjct: 241 MSTSVAYLVGIGVARREIGGILTKYPEILGMRVARVIKPFVEYLEGLGIPRLAVARLIEK 300

Query: 301 RPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLESKLPTQRNLLKSLI 360
           RPHILGFGLEKKVKPNIQLLLEF VREAYL SIVAQYAEIIGMDLE+ L TQRNLLKSLI
Sbjct: 301 RPHILGFGLEKKVKPNIQLLLEFKVREAYLPSIVAQYAEIIGMDLEANLQTQRNLLKSLI 360

Query: 361 ELNDDNFGAIIEKMPQIVSLSSSAVINHVDLLKTCGFSLLQVKNMVVGCPQLLALNIDIM 420
           EL++DNFG IIEKMPQIVSLS SAVINHVD LKTCGFSLLQVKNMV+GCPQLLALNIDIM
Sbjct: 361 ELDNDNFGTIIEKMPQIVSLSRSAVINHVDFLKTCGFSLLQVKNMVIGCPQLLALNIDIM 420

Query: 421 KHSFEFFQMDMGRPLDDLVTFPAFFTYGLESTIKPRHKKVVQKGISCSLSWLLNCSDEKF 480
           KHSFEFFQM+MGRPL+DL TFPAFFTYGLESTIKPRH+KVVQKGISCSLSWLLNC+DEKF
Sbjct: 421 KHSFEFFQMEMGRPLEDLATFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCADEKF 480

Query: 481 AERMSYDTIDMEEMETTPTFDMNSLIQPRNDESDSEYEEDS 521
            ERMSYDTIDMEEMETTPTFDMNSL+QPRNDESDSEYEEDS
Sbjct: 481 VERMSYDTIDMEEMETTPTFDMNSLVQPRNDESDSEYEEDS 520

[Close]

BLAST of HG10022316 vs. ExPASy TrEMBL
Match: A0A5A7VMZ0 (Transcription termination factor MTERF4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00320 PE=3 SV=1)

HSP 1 Score: 941.4 bits (2432), Expect = 1.6e-270
Identity = 482/521 (92.51%), Postives = 497/521 (95.39%), Query Frame = 0


Query: 1   MIRGHAGVVKPNFSFMLFEMPTLLECQKFKFTATPTFQTSSNHEKRRGLITQLQYSHGDR 60
           MIRGHAGVVKPN SFMLFEM T LEC  FKFTATPTF TS  HEKRR L TQLQYSHGDR
Sbjct: 1   MIRGHAGVVKPNVSFMLFEMST-LECHNFKFTATPTFLTSCIHEKRRCLTTQLQYSHGDR 60

Query: 61  RTVFKSLHSTVSSKPCNTKVGRKEGSA-SSLYSRPSLVEMKNVRLENRSKVYEFLRGIGV 120
           RTVFKSLHST+SSKP ++KVGRK GS+ SSLYSRPSLVEMKNVRLENRSKVYEFLRGIGV
Sbjct: 61  RTVFKSLHSTISSKPYSSKVGRKGGSSGSSLYSRPSLVEMKNVRLENRSKVYEFLRGIGV 120

Query: 121 VPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLG 180
           VPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLG
Sbjct: 121 VPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLG 180

Query: 181 VRKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPTDIPRVLERYPEVLGFKLEGT 240
           VRKSTFTEFLKRYPQVLHSSVVVDLAPV+KYLQGMDIKP DIPRVLERYPEVLGFKLEGT
Sbjct: 181 VRKSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGT 240

Query: 241 MSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEK 300
           MSTSVAYLVGIGVARREIGG+LTKYPEILGMRVARVIKPFVEYLE LGIPRLAVARLIEK
Sbjct: 241 MSTSVAYLVGIGVARREIGGILTKYPEILGMRVARVIKPFVEYLEGLGIPRLAVARLIEK 300

Query: 301 RPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLESKLPTQRNLLKSLI 360
           RPHILGFGLEKKVKPNIQLLLEF VREAYL SIVAQYAEIIGMDLE+ L TQRNLLKSLI
Sbjct: 301 RPHILGFGLEKKVKPNIQLLLEFKVREAYLPSIVAQYAEIIGMDLEANLQTQRNLLKSLI 360

Query: 361 ELNDDNFGAIIEKMPQIVSLSSSAVINHVDLLKTCGFSLLQVKNMVVGCPQLLALNIDIM 420
           EL++DNFG IIEKMPQIVSLS SAVINHVD LKTCGFSLLQVKNMV+GCPQLLALNIDIM
Sbjct: 361 ELDNDNFGTIIEKMPQIVSLSRSAVINHVDFLKTCGFSLLQVKNMVIGCPQLLALNIDIM 420

Query: 421 KHSFEFFQMDMGRPLDDLVTFPAFFTYGLESTIKPRHKKVVQKGISCSLSWLLNCSDEKF 480
           KHSFEFFQM+MGRPL+DL TFPAFFTYGLESTIKPRH+KVVQKGISCSLSWLLNC+DEKF
Sbjct: 421 KHSFEFFQMEMGRPLEDLATFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCADEKF 480

Query: 481 AERMSYDTIDMEEMETTPTFDMNSLIQPRNDESDSEYEEDS 521
            ERMSYDTIDMEEMETTPTFDMNSL+QPRNDESDSEYEEDS
Sbjct: 481 VERMSYDTIDMEEMETTPTFDMNSLVQPRNDESDSEYEEDS 520

[Close]

BLAST of HG10022316 vs. ExPASy TrEMBL
Match: A0A0A0KRV7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G466880 PE=3 SV=1)

HSP 1 Score: 936.0 bits (2418), Expect = 6.6e-269
Identity = 479/521 (91.94%), Postives = 494/521 (94.82%), Query Frame = 0


Query: 1   MIRGHAGVVKPNFSFMLFEMPTLLECQKFKFTATPTFQTSSNHEKRRGLITQLQYSHGDR 60
           MIRGHAGV KPNFS MLFEM T LEC  FKFTAT TFQ   NHEKR+GLITQLQYSHGDR
Sbjct: 1   MIRGHAGVAKPNFSLMLFEMST-LECHNFKFTATRTFQMPYNHEKRKGLITQLQYSHGDR 60

Query: 61  RTVFKSLHSTVSSKPCNTKVGRKEGS-ASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGV 120
           RTVFKSLHST+SSK  ++KV RKEGS  SSLYSRPSLVEMKNVRLENRSKVYEFLRGIGV
Sbjct: 61  RTVFKSLHSTISSKSYSSKVDRKEGSIGSSLYSRPSLVEMKNVRLENRSKVYEFLRGIGV 120

Query: 121 VPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLG 180
           VPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPL+LGCSVKKNMIPVLDYLGKLG
Sbjct: 121 VPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLILGCSVKKNMIPVLDYLGKLG 180

Query: 181 VRKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPTDIPRVLERYPEVLGFKLEGT 240
           VRKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKP DIPRVLERYPEVLGFKLEGT
Sbjct: 181 VRKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPNDIPRVLERYPEVLGFKLEGT 240

Query: 241 MSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEK 300
           MSTSVAYLVGIGV RREIGGVLTKYPEILGMRVARVIKPFVEYLE LGIPRLAVARLIEK
Sbjct: 241 MSTSVAYLVGIGVTRREIGGVLTKYPEILGMRVARVIKPFVEYLEGLGIPRLAVARLIEK 300

Query: 301 RPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLESKLPTQRNLLKSLI 360
           RPHILGFGLEKKVKPNIQLLLEF VREAYL SIVAQYAEIIG+DLE+ L TQRNLLKSLI
Sbjct: 301 RPHILGFGLEKKVKPNIQLLLEFKVREAYLPSIVAQYAEIIGIDLEANLQTQRNLLKSLI 360

Query: 361 ELNDDNFGAIIEKMPQIVSLSSSAVINHVDLLKTCGFSLLQVKNMVVGCPQLLALNIDIM 420
           EL++DNFG IIEKMPQ+VSLS SAVINHVD LKTCGFSLLQVKNMV+GCPQLLALNIDIM
Sbjct: 361 ELDNDNFGTIIEKMPQVVSLSRSAVINHVDFLKTCGFSLLQVKNMVIGCPQLLALNIDIM 420

Query: 421 KHSFEFFQMDMGRPLDDLVTFPAFFTYGLESTIKPRHKKVVQKGISCSLSWLLNCSDEKF 480
           KHSFEFFQM+MGRPL+DL TFPAFFTYGLESTIKPRH+KVVQKGISCSLSWLLNC+DEKF
Sbjct: 421 KHSFEFFQMEMGRPLEDLATFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCADEKF 480

Query: 481 AERMSYDTIDMEEMETTPTFDMNSLIQPRNDESDSEYEEDS 521
            ERMSYDTIDMEEMETTPTFDMNSLIQPRNDESDSEYEEDS
Sbjct: 481 MERMSYDTIDMEEMETTPTFDMNSLIQPRNDESDSEYEEDS 520

[Close]

BLAST of HG10022316 vs. ExPASy TrEMBL
Match: A0A6J1FDE7 (transcription termination factor MTERF4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111444359 PE=3 SV=1)

HSP 1 Score: 923.7 bits (2386), Expect = 3.4e-265
Identity = 465/520 (89.42%), Postives = 496/520 (95.38%), Query Frame = 0


Query: 1   MIRGHAGVVKPNFSFMLFEMPTLLECQKFKFTATPTFQTSSNHEKRRGLITQLQYSHGDR 60
           MIRGH GVVKPNFS ML EMPT L+C KFKF  T TFQTS NHEKRRGLIT+LQYS GD 
Sbjct: 2   MIRGHTGVVKPNFSIMLLEMPT-LKCHKFKFDTTSTFQTSPNHEKRRGLITKLQYSRGDW 61

Query: 61  RTVFKSLHSTVSSKPCNTKVGRKEGSASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVV 120
           RTV KSLHST++SKP ++KVGRKEGSASSLYSRPSLVEMKNVR ENR+KVYEFLRGIG+V
Sbjct: 62  RTVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIV 121

Query: 121 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV 180
           PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGV
Sbjct: 122 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGV 181

Query: 181 RKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPTDIPRVLERYPEVLGFKLEGTM 240
           RKSTFTEFL+RYPQVLHSSVVVDL PV+KYLQGMDIKP+DIPRVLERYPEVLGFKLEGTM
Sbjct: 182 RKSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTM 241

Query: 241 STSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKR 300
           STSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKR
Sbjct: 242 STSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKR 301

Query: 301 PHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLESKLPTQRNLLKSLIE 360
           PHILGFGLEK+VKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLE+KLP+QRNLLKS+IE
Sbjct: 302 PHILGFGLEKRVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIE 361

Query: 361 LNDDNFGAIIEKMPQIVSLSSSAVINHVDLLKTCGFSLLQVKNMVVGCPQLLALNIDIMK 420
           L++DNFG IIEKMPQ+VSLSSSAV +HVD LK+CGFSL QVKNMV+GCPQLLALN+DIMK
Sbjct: 362 LDNDNFGTIIEKMPQVVSLSSSAVNSHVDCLKSCGFSLQQVKNMVIGCPQLLALNLDIMK 421

Query: 421 HSFEFFQMDMGRPLDDLVTFPAFFTYGLESTIKPRHKKVVQKGISCSLSWLLNCSDEKFA 480
           HSF+FFQ +MGRPLDDLV FPAFFTYGLESTIKPRH+KVVQKG++CSLSWLLNCSDEKFA
Sbjct: 422 HSFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFA 481

Query: 481 ERMSYDTIDMEEMETTPTFDMNSLIQPRNDESDSEYEEDS 521
           ERM+YDTIDMEEMET PTFDM+SL QPR DESDS+YEEDS
Sbjct: 482 ERMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDS 520

[Close]

BLAST of HG10022316 vs. ExPASy TrEMBL
Match: A0A6J1DUY1 (transcription termination factor MTERF4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111023323 PE=3 SV=1)

HSP 1 Score: 913.7 bits (2360), Expect = 3.5e-262
Identity = 461/520 (88.65%), Postives = 496/520 (95.38%), Query Frame = 0


Query: 1   MIRGHAGVVKPNFSFMLFEMPTLLECQKFKFTATPTFQTSSNHEKRRGLITQLQYSHGDR 60
           MIR HAGVVKPNFS ++ +MPT L+C KF FT T  FQT SN ++RRGLIT+LQYS GDR
Sbjct: 2   MIRRHAGVVKPNFSIIVPKMPT-LKCCKFTFTTTSIFQTPSNRDRRRGLITRLQYSDGDR 61

Query: 61  RTVFKSLHSTVSSKPCNTKVGRKEGSASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVV 120
           RTV KSLHST++SKP +T+VGRKEGSASSLYS PSLVEMKNVRLENR+KVYEFL GIG+V
Sbjct: 62  RTVSKSLHSTITSKPSSTRVGRKEGSASSLYSHPSLVEMKNVRLENRAKVYEFLCGIGIV 121

Query: 121 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV 180
           PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV
Sbjct: 122 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV 181

Query: 181 RKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPTDIPRVLERYPEVLGFKLEGTM 240
           RKSTFTEFL+RYPQVLH+SVVVDLAPV+KYLQGMDIKP DIP VLERYPEVLGFKLEGTM
Sbjct: 182 RKSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIPHVLERYPEVLGFKLEGTM 241

Query: 241 STSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKR 300
           STSVAYLVGIGVAR+EIGGVLTKYP+ILGMRVARVIKPFVEYLESLGIPRLAVARLIEKR
Sbjct: 242 STSVAYLVGIGVARKEIGGVLTKYPDILGMRVARVIKPFVEYLESLGIPRLAVARLIEKR 301

Query: 301 PHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLESKLPTQRNLLKSLIE 360
           PHILGFGLEKKVKPNIQ+LL+FNVRE YLSSIVAQYAEIIGMDLE+KL +QRNLLKS+IE
Sbjct: 302 PHILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDLETKLLSQRNLLKSIIE 361

Query: 361 LNDDNFGAIIEKMPQIVSLSSSAVINHVDLLKTCGFSLLQVKNMVVGCPQLLALNIDIMK 420
           L+DDNFG II KMPQIVSLSSSAVINHVD LK+CGFSL+QVKNMV+GCPQLLALN+DIMK
Sbjct: 362 LDDDNFGTIIGKMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQLLALNLDIMK 421

Query: 421 HSFEFFQMDMGRPLDDLVTFPAFFTYGLESTIKPRHKKVVQKGISCSLSWLLNCSDEKFA 480
           HSF+FFQM+MGRPLDDLVTFPAFFTYGLESTIKPRH+KVVQKGI+CSLSWLLNCSDEKFA
Sbjct: 422 HSFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGITCSLSWLLNCSDEKFA 481

Query: 481 ERMSYDTIDMEEMETTPTFDMNSLIQPRNDESDSEYEEDS 521
           ERM+YDTIDMEEMET PTFDMNSLIQPRND+SDS+YEEDS
Sbjct: 482 ERMTYDTIDMEEMETAPTFDMNSLIQPRNDDSDSDYEEDS 520

[Close]

BLAST of HG10022316 vs. TAIR 10
Match: AT4G02990.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 689.1 bits (1777), Expect = 2.7e-198
Identity = 358/531 (67.42%), Postives = 425/531 (80.04%), Query Frame = 0


Query: 2   IRGHAGVVKPNFSFMLFEMPTLLECQKFKFTATPTFQTSSNHEKR--RGLITQLQYSHGD 61
           IR   G  KP F  + FE P+    +  +  +  T+    NH+KR   G+   +Q +  +
Sbjct: 3   IRFCNGFTKPGFLLVHFEPPSFFAVRS-RSLSDSTYGNLCNHKKRPGTGIGLTVQCAIAN 62

Query: 62  RRTVFKSLHS--TVSSKPCNTKVGR-------KEGSASSLYSRPSLVEMKNVRLENRSKV 121
           RR   +SL S     S   ++  GR       K   + SLYSRPSL++M   +  NR+KV
Sbjct: 63  RRFSSRSLDSPRRERSSRSSSSSGRDRDRDKDKGRDSKSLYSRPSLLDMNKEKAANRAKV 122

Query: 122 YEFLRGIGVVPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIP 181
           YEFLRGIG+VPDELDGLELPVT DVMKERV+FL KLGLTIEDINNYPLVLGCSVKKNM+P
Sbjct: 123 YEFLRGIGIVPDELDGLELPVTADVMKERVEFLHKLGLTIEDINNYPLVLGCSVKKNMVP 182

Query: 182 VLDYLGKLGVRKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPTDIPRVLERYPE 241
           VLDYLGKLGVRKSTFTEFL+RYPQVLHSSVV+DLAPV+KYLQG+DIKP+D+PRVLERYPE
Sbjct: 183 VLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVIDLAPVVKYLQGLDIKPSDVPRVLERYPE 242

Query: 242 VLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPR 301
           VLGFKLEGTMSTSVAYLVGIGVARREIGG+LT+YPEILGMRVAR+IKP VEYLE LGIPR
Sbjct: 243 VLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEILGMRVARIIKPLVEYLEVLGIPR 302

Query: 302 LAVARLIEKRPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLESKLPT 361
           LA ARLIEKRPHILGF L+  VKPN+Q+L +FNVRE  L SI+AQY EIIG+DL+ KL T
Sbjct: 303 LAAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLPSIIAQYPEIIGIDLKPKLDT 362

Query: 362 QRNLLKSLIELNDDNFGAIIEKMPQIVSLSSSAVINHVDLLKTCGFSLLQVKNMVVGCPQ 421
           QR LL S I LN ++ G++IE+MPQ VSLS S ++ H+D L  CGFS+ Q + MV+GCPQ
Sbjct: 363 QRKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLKHIDFLTKCGFSIDQTREMVIGCPQ 422

Query: 422 LLALNIDIMKHSFEFFQMDMGRPLDDLVTFPAFFTYGLESTIKPRHKKVVQKGISCSLSW 481
           +LALN+ IMK SFE+FQ +M RPL DLV FPAFFTYGLEST+KPRHKK+++KGI CSL+W
Sbjct: 423 VLALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKKIIKKGIKCSLAW 482

Query: 482 LLNCSDEKFAERMSYDTIDMEEMETTP-TFDMNSLIQP-RNDESDSEYEED 520
           +LNCSDEKF +RMSYDTID+EE+ET P +FDMN+L+QP R +ESDSEYEE+
Sbjct: 483 MLNCSDEKFEQRMSYDTIDIEEVETDPSSFDMNTLMQPEREEESDSEYEEE 532

[Close]

BLAST of HG10022316 vs. TAIR 10
Match: AT2G44020.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 443.4 bits (1139), Expect = 2.6e-124
Identity = 209/424 (49.29%), Postives = 315/424 (74.29%), Query Frame = 0


Query: 96  LVEMKNVRLENRSKVYEFLRGIGVVPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINN 155
           +++ K  +L NR K+ ++L+G+G++ DEL+ +ELP T++VM ERV+FL KLGLTI+DIN 
Sbjct: 72  VIQGKKEKLVNRVKICDYLKGLGIITDELESIELPSTIEVMCERVEFLQKLGLTIDDINE 131

Query: 156 YPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMD 215
           YPL+LGCSV+KN+IPVL YL K+G+ +S   EF+K YPQVLH+SVVV+LAPV+K+L+G+D
Sbjct: 132 YPLMLGCSVRKNLIPVLAYLEKIGISRSKLGEFVKNYPQVLHASVVVELAPVVKFLRGLD 191

Query: 216 IKPTDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARV 275
           ++  D+  VL +YPE+LGFKLEGTMSTSVAYLV IGV+ R+IG ++T+YP +LGMRV  +
Sbjct: 192 VEKQDLGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLLGMRVGTM 251

Query: 276 IKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQ 335
           IKP V+YL S+G+P+  VAR++EKR +I+G+ LE+ VKPN+  L+ F V++  L  ++AQ
Sbjct: 252 IKPLVDYLISIGLPKKIVARMLEKRSYIVGYNLEETVKPNVDCLISFGVKKELLPLLIAQ 311

Query: 336 YAEIIGMDLESKLPTQRNLLKSLIELNDDNFGAIIEKMPQIVSLSSSAVINHVDLLKTCG 395
           Y +I+G+ +++K+ TQ+      ++++ + F  ++EKMPQIVSL  + ++  ++ L    
Sbjct: 312 YPQILGLPVKAKMSTQQYFFSLKLKIDPEGFARVVEKMPQIVSLKQNVIMKPIEFLLGRA 371

Query: 396 FSLLQVKNMVVGCPQLLALNIDIMKHSFEFFQMDMGRPLDDLVTFPAFFTYGLESTIKPR 455
           F +  +  MVV CPQ+L   +++MK+S+ F++ +MGRP+ +LV +P +FTY LES IKPR
Sbjct: 372 FQVEDIAKMVVRCPQILCSRVELMKNSYYFYKTEMGRPMKELVEYPEYFTYSLESRIKPR 431

Query: 456 HKKVVQKGISCSLSWLLNCSDEKFAERMSYDTIDMEEMETTPTFDMNSLIQPRNDESDSE 515
           ++K+  KGI  SL+W LNCSD++F ER+  + ID +     PTFDM   ++    E  ++
Sbjct: 432 YQKLQSKGIRSSLNWFLNCSDQRFEERLQGNFIDPD--TEGPTFDMGGKLEMPGGEIVTD 491

Query: 516 YEED 520
            EED
Sbjct: 492 EEED 493

[Close]

BLAST of HG10022316 vs. TAIR 10
Match: AT2G21710.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 141.7 bits (356), Expect = 1.6e-33
Identity = 91/363 (25.07%), Postives = 173/363 (47.66%), Query Frame = 0


Query: 165 KKNMIPVLDYLGKLGVRKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPTDIPRV 224
           ++ +  +++YL   GVR+      + R P++L  S + ++   + +   M +   D   +
Sbjct: 278 REELNEIVEYLESNGVRRDWMGYVVGRCPELLSFS-MEEVKSRVDFFLKMGMNQNDFGTM 337

Query: 225 LERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLE 284
           +  YP+++GF     M   + YL   G++  E+G +L   P ++G  +    KP V+Y  
Sbjct: 338 VYDYPKIIGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFY 397

Query: 285 SLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDL 344
            LGIP+  + R++  +P +    LEK + P ++ L E  +    + +++ ++  ++   L
Sbjct: 398 YLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSL 457

Query: 345 ESKLPTQRNLLKSLIELNDDNFGAIIEKMPQIVSLSSSAVIN-HVDLLKTCGFSLLQVKN 404
             K+      L +   +   + G +I   P ++  S    +  ++    + G    Q+  
Sbjct: 458 YKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGE 517

Query: 405 MVVGCPQLLALNIDIMKHSFEFFQMDMGRPLDDLVTFPAFFTYGLESTIKPRHKKVVQKG 464
           M+   P LL  N+D ++  + + +  M RPL DL+ FP FF+Y LE  I PRH  +V+  
Sbjct: 518 MIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENR 577

Query: 465 ISCSLSWLLNCSDEKFAERMSYDTIDMEE-------METTPTFDMNSLIQPRNDESDSEY 520
           ++  L ++L C+DE+F ER   D ++  E        E +   D N   Q      ++E 
Sbjct: 578 VNFKLRYMLACTDEEF-ERRVRDKVERRERFEAGLDSEDSQPSDENISDQEIAFSDEAEE 637

[Close]

BLAST of HG10022316 vs. TAIR 10
Match: AT4G38160.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 139.0 bits (349), Expect = 1.0e-32
Identity = 69/276 (25.00%), Postives = 146/276 (52.90%), Query Frame = 0


Query: 216 IKPTDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARV 275
           I+   +P ++ R P++L  +L+  +   V  L  +G   RE+   +TK+P IL   V   
Sbjct: 54  IQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEK 113

Query: 276 IKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQLLLEFNV-REAYLSSIVA 335
           + P + + ++LG+P   + ++I   P ++ + ++ K+   +  L    + ++  +  ++ 
Sbjct: 114 LCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLV 173

Query: 336 QYAEIIGMDLESKLPTQRNLLKSLIELNDDNFGAIIEKMPQIVSLSSSAVIN-HVDLLKT 395
           +   ++G  ++ +L      LKS + L++D   +++   PQ++    + ++  + D LK 
Sbjct: 174 KNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKE 233

Query: 396 CGFSLLQVKNMVVGCPQLLALNI-DIMKHSFEFFQMDMGRPLDDLVTFPAFFTYGLESTI 455
           CGF   Q+  MV G PQ+L  ++ + ++    F    MGR +D++ ++P FF +GL+  +
Sbjct: 234 CGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKV 293

Query: 456 KPRHKKVVQKGISCSLSWLLNCSDEKFAERMSYDTI 489
           + R K V +  I CSL  +L+C+ +KF E+  +  +
Sbjct: 294 ESRFKLVKKNNIDCSLREMLDCNTKKFHEKFGFSEV 329

[Close]

BLAST of HG10022316 vs. TAIR 10
Match: AT4G38160.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 139.0 bits (349), Expect = 1.0e-32
Identity = 69/276 (25.00%), Postives = 146/276 (52.90%), Query Frame = 0


Query: 216 IKPTDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARV 275
           I+   +P ++ R P++L  +L+  +   V  L  +G   RE+   +TK+P IL   V   
Sbjct: 54  IQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEK 113

Query: 276 IKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQLLLEFNV-REAYLSSIVA 335
           + P + + ++LG+P   + ++I   P ++ + ++ K+   +  L    + ++  +  ++ 
Sbjct: 114 LCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLV 173

Query: 336 QYAEIIGMDLESKLPTQRNLLKSLIELNDDNFGAIIEKMPQIVSLSSSAVIN-HVDLLKT 395
           +   ++G  ++ +L      LKS + L++D   +++   PQ++    + ++  + D LK 
Sbjct: 174 KNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKE 233

Query: 396 CGFSLLQVKNMVVGCPQLLALNI-DIMKHSFEFFQMDMGRPLDDLVTFPAFFTYGLESTI 455
           CGF   Q+  MV G PQ+L  ++ + ++    F    MGR +D++ ++P FF +GL+  +
Sbjct: 234 CGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKV 293

Query: 456 KPRHKKVVQKGISCSLSWLLNCSDEKFAERMSYDTI 489
           + R K V +  I CSL  +L+C+ +KF E+  +  +
Sbjct: 294 ESRFKLVKKNNIDCSLREMLDCNTKKFHEKFGFSEV 329

The following BLAST results are available for this feature:

BLAST of HG10022316 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890870.1	1.1e-273	93.27	transcription termination factor MTERF4, chloroplastic [Benincasa hispida] >XP_0...	[more]
XP_008465763.1	3.3e-270	92.51	PREDICTED: transcription termination factor MTERF4, chloroplastic [Cucumis melo]...	[more]
XP_004143818.1	1.4e-268	91.94	transcription termination factor MTERF4, chloroplastic [Cucumis sativus] >KGN511...	[more]
XP_023538106.1	8.3e-266	89.62	transcription termination factor MTERF4, chloroplastic [Cucurbita pepo subsp. pe...	[more]
XP_022938209.1	7.0e-265	89.42	transcription termination factor MTERF4, chloroplastic [Cucurbita moschata] >XP_...	[more]

BLAST of HG10022316 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT96	3.8e-197	67.42	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q6AUK6	1.7e-160	63.68	Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja...	[more]
B6TGN4	6.0e-158	62.21	Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT...	[more]
F4IHL3	2.3e-32	25.07	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9SZL6	1.5e-31	25.00	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]

BLAST of HG10022316 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CR33	1.6e-270	92.51	transcription termination factor MTERF4, chloroplastic OS=Cucumis melo OX=3656 G...	[more]
A0A5A7VMZ0	1.6e-270	92.51	Transcription termination factor MTERF4 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A0A0KRV7	6.6e-269	91.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G466880 PE=3 SV=1	[more]
A0A6J1FDE7	3.4e-265	89.42	transcription termination factor MTERF4, chloroplastic OS=Cucurbita moschata OX=...	[more]
A0A6J1DUY1	3.5e-262	88.65	transcription termination factor MTERF4, chloroplastic OS=Momordica charantia OX...	[more]

BLAST of HG10022316 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02990.1	2.7e-198	67.42	Mitochondrial transcription termination factor family protein	[more]
AT2G44020.1	2.6e-124	49.29	Mitochondrial transcription termination factor family protein	[more]
AT2G21710.1	1.6e-33	25.07	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.1	1.0e-32	25.00	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.2	1.0e-32	25.00	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 367..397 e-value: 0.37 score: 19.8 coord: 402..433 e-value: 0.083 score: 22.0 coord: 186..217 e-value: 5.4E-4 score: 29.3 coord: 258..289 e-value: 1.1E-4 score: 31.6 coord: 222..253 e-value: 0.0053 score: 26.0 coord: 330..362 e-value: 670.0 score: 5.3 coord: 434..465 e-value: 0.04 score: 23.1 coord: 87..120 e-value: 640.0 score: 5.4 coord: 150..181 e-value: 0.0039 score: 26.4 coord: 294..325 e-value: 3.6E-4 score: 29.9
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 172..480 e-value: 1.0E-104 score: 349.9
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 31..512
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 136..275 e-value: 5.3E-25 score: 90.0 coord: 276..489 e-value: 6.1E-48 score: 165.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 496..520
None	No IPR available	PANTHER	PTHR13068:SF109	TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC	coord: 31..512

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10022316.1	HG10022316.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0042794	plastid rRNA transcription
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008380	RNA splicing
cellular_component	GO:0009536	plastid
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0003729	mRNA binding