HG10022252 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10022252
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	psbP-like protein 1, chloroplastic
Location	Chr05: 22349106 .. 22357579 (-)
RNA-Seq Expression	HG10022252
Synteny	HG10022252

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAGGGTAGACATTGATTCGGTTTCGGACTCGAGTGATTTCAAGAAAGGGATAGTACAAGTTCCTCAAATTACTTGGCTTACTCTGTAAGTTCATCTTTTACATTGCAACATAATTCTAGTATTGTTTGGGTTCTATCAGTTTTGTTTAAAAGCTTTCAGTAGAATGTTGCCCATACTCTTCATGGACTTGGAATATTCTGTAACTTTATCTTCATAGGGTTCTTTTTCATCCTTCTAACTTTAGTATTTTCTATATTTTTTAGGATTTAATTATGAATTCAAATGTTTCATTAAGAAAGATGAAAACTATCATTAAGTGAGTGTGAGAAAACAACAAAAGCTCTAATGCCACACTACCAGTGTATGTGAACATAGAATAAAGAAGAAGCAAGAATAAAGTTTTCTTCACTTACCAAGTAGCTGAAACTTGTGCTTTTCCTTATCTTCTTTGATTCTTTTCTTTGGATACTACAACTACAATTCAGCTAGTAACAGATATTAGAAACTTGAACCTCCCTTTTAACAGTAAGAAATGCTTGTTCTGAAGTCAACACTTCAAATTCTTCTGATTTACGAGGGAATTAGAATAACTAGAAATGAATGCAAGAAAATCAACAATAGCCCACAGAAAATTAACATGAAATAGAGTAGAACTAATATGTTTTGCAAGTGAAGTAAAACGGATTTCTTTTAAACATACAGTCAATATTGCACAGAGGAACAATATATTACTGCTTCGACTGAATGCTAATTAACTGTACATAAAAGCTGAGTTATCAAAGTCCTCTTTCTCTAGTAATTAAAATGCCTTCAGAAGAACAATAGAAGTTCAATTCCCTCAATCATTAGTAGAAACTAAAAAGTTCAAGATTTTACTCAAAATTTAACTCTGAAGTCAAGTTAGAATTCAAATTCCCCAGCAGAATTGATCCAACTCCAAGAAACTCATAACACCAGAAATTCACAGCATGACAAACTATCTTTCAACATTTAGCATTGTAATTCCCAGCTCGTTTCCTTCTTAATTTTCTTCCAAACTCCCAGTCAGATAAACAGACATACAAGAGAATAAACCGATCTCATAACACACTACCAATGCACTGAAAATGGGAGAAAAGAAGAAATTAGCAAGAATAAAGTTTTCTTTACTTACCCAATTATAGCTGGAATTTGTGTTGCTTTTTTTTTTTTCTTAAACTTCTTTGCTTCTTTCCTTTAGCGTTTACAACTACAATTTCAGCTAATACCTGATCTTAACAAACTTAAATCTCCCTTTTAATGGTAAGAAATGCTTGTTATGAAGTCAACACCTCAAATTCTTCTGATTTACAAGAAGGAACCTCCACAAACACAACCAGCATAAGACGAAGAAAATCAAACAATGCATATCTGTGAACGTAGCACACAGAAAATTAACATGGAATAGTATGACAGAACAAATATGTTTTGCAAATGAAGTGAAACGGATTTCTCATCAACATAAAGTCAATGTTGCACAGAGGAATGTAATTTAGCGAGTTTTCAATATAATGCTGTTCTGAATGCTTAATTAGTTGTACATAAAAACTGAATAATGTAAGTCCTCTTTCTCCTGAAATCAAAAATTTGTACTTATAATTTCTTAATAACATAAAAGAACAACGTTAATCTAAACATAAGTTATCGTTATTCTGTAAGTAAAATGCTTTCGGAGTTGAATATTCATTCAAGTGATCCTTGAGAGGCTATTGAAACATCTATTTAGAAGCTAAGAGTAATGATGAACAAACAGAGGCTGATTCGTAACAAAATTCTTAATTACAATTCATCGCAAAATTCCCCAATTGAAGCTCATTAACATTTCACTTCAATGGATCAAAACCTTCGAAATTCACACGTACAATCGACGCCTGGAACAAAATTTTGATGTAAAAGTTCAGGAAAGCAGAATAATATAGCATCCAAATCCGATCGAGTAAATTCCAAAGAACTGTTATCCGCATAACGAAGAATTTACTCACCTACAATAAGAGACCCGCCATCATCTCGTATTCGATCGCAAACTTGACCACAAACGGCCATTGATGACTTTCCCCTTCATAGAGAAAAGATCGCAACGAATGGAAAATGGAATTGTAACAGTTCCTAGATATTGAATTTTTATTCACAAATGAAACATAAATTAGGGTTTCTAGATGAAATCTTTGAGCAAATATGTTCCCTACAAAAACCCCGGTTCAATTTCACATTGGAAACCAATGAAAACTCAAATTAGTGGTTTTCCCGATTAAACCCGCGTGTAAACGTTCTACCAAAATCCCATTCGATTTCACATTATTATGGGAAACAAACGGAAACTCCAAATATTAGGGGGTTTTTCCCGATTAAATCCGAGTAACTGTTCCCACAAATCACACGATTCTATTTCCAAAAGGAATCTCAAAATTAGTGTTTCAAGACAATATTCATATTATGGTTGTTTTCTATCTTAGAATAAATTTCATATATATATTGGAAATAATAATAATTATATAATAGGAAGAGTTTAGAACTGGAATTGGGGGGTGGGTAAATTGGGAGGCCCGCACGAAGGAGTTCTGCAAAGTAAGCAGCGTCAACAATCGGCCGGCCTTTAACCCCTCCACAAATTCATGCGCATAACAATGGTAAGCGCTGCGGCCGGATCCCCCCGACCACTTTGTTTTCCTTACTCATTAGTTTAAGGCAATTTGTTTGATGCCGCCAATCTTCTATTTATAGCCCAAGCCCAAGTCTCTTTTTCGCGCCTCTCCGATGTGGGATATTGCGTTATCTGACTTCTGATTTAGAAAGTCTTTTCAAAACATAGGTAAATTACGATTTTTCCCTCTCAAAATAATAATAATAATAATAATAAATAAGTTAAATTACAAATTTAGACCATGTAATTTTAATAAAATTAGAATTTAGTCTCTATGGTTTGATATAAATAGTCTATATGGTATTGTTCGACTAGATTTTTAGAGATATTTAATTCGTGAAATTTGAACTTTATATTTGTATTGATTTCAGTCTAGTACAATGAGTTCAATCTCTAATATTTGATCATCTGATGTTTTCTCTCGAAAAATAAAATTTAATCTTTAGGTTTGTTGATCTTCTTGGATGATCGGCTTTTGGACTTGATCGAATCGGCCTTTGGACTAATTGATCGATTTGGATCGACCTCTGGCTTGTTGGTAGACTTGGATCGATCTTCGACTTTAATCAACCTCTAGCTTGGTGATTTTTTGGATCGGCCTCTGGCTTGTTCATCGGCTTTAACCGACCTCTAGCTTGCTTATCTACTTAGATCGATCTTTAGAGTTTCTGACTTGAAGATATTTAAAGAGTTTTCTAATCTTATGGAAGTGTGAGCTTTAGGCTTTATATTTTCAGTGGAGCAAAAGTTGATCCAAAACTTTAGTTTGTCTTTTGATCTTCAAAATTTTGAGGGTGTAAATGTTCCTACAAAGGCCTTTATTCATAGAAGTTTTCCATGGGCTTTGGGCCTTGTTGCTTTTGGACTTGGGCTAATAGTTGGGCTTGGGCTCAGTCTCTTATTTGACCCAAATTTTCACAATGGGTTTAAATTGGGTTGGACTTTGGACCCGAGCAACTTTAATTACACGACCCGATTCAAATTATAATTTCCACAATGGACTAAGACTTTCTATGTGATGAAATGACAATTTTTGATTGGCCAAATTTATCATCCAACCGATATAAGAATAAATAAATCATGAATATTTGTTTGGTAAATTATTTAAACAATTATAAGTTATCGAACTCTTAAATTTTGTGTTAACTAATTATTTTGTGTTAAGATTTCAATCTTGTGCCTATTACCTAATAAGTACTTAAAGTTGTAAGTTTATTCTAATAAGGCATTGACATGTTTGATATTTTTTAAATTTTGCAAATATTTCAAAAGACGAACTTAAACTTTTAAGGTCCTATTAGACATACGATTCAATCTCATATTTAATATATTTGTTAGCTTTGTGAAGTCTTGAATGCTTCAATGATATATTGATACAAATTTAAAAGTTTGTAGATTTATGAATACATTTTCAAAATTTGGGTTATTTTGTTAACGTACACTATAACAATTTAGAAATTTATCAGAACATGAATTTTGCAGAACTAAACAGATAGTTTAACAATTATTTTTCAACGAACAAAATATAGCGTGTATTTAGGGTCCACTTGGCATTGTTTCTAATTTTTGTTTTTCTTTTGTTGTTATCGAAAAATACAATTATGTTTAGTAACTATTTTGTGTGGCTTGTTATTTCATTTTCATTGAAAACAAAAATAGAAACATATTTGGTAACCATTTATCATTTTTTGTTCTCTATTTTTTATTCTTAATTTTTAAAATAAATATGTAAATATTTTACACCGTAAAATTGAGCATACCTTTACGCTCTGTGTTGGCCTCTCGCCACTTTTTAAGTATTTTTTTTTCTATTTCTTCAATGGTTAAGTGTGTTTGGCAATACATTTATAAACGTCACCCGAACTTATACTATCAACTTATAAGTTTGAGTATCGATTCTCAAATAATTTTAAATCCTATTATCTAAAATATGAGAAATAATTTCAACCTGGTAAGTTATTGATTTTAATAATATTATTATTATTATTAGAACTAGTACAACAAATTAAGTAAGTATAGAGATTTGAAACAACCAAAAATAGAATTACATGTAATTCTATGCTCATTTGAATCATTTTAAGTTTATTTATATTTATTTAGTTTAAAAAGTGGTGAGGGACCGACGCAAGAAATGTGGCTGAGGGAACCCGCGAAGACAGCGGATAGGCAATCCAATAACAAAACCAAAAGATAAGGTAATCTCACGTTAACGAAGCACACGCTTCACAAGCAAAGGTCCTTCAATGGCTTCTCTGCATTGCTCACCCTCTGTTCAAAACTCCCTCTTCGTCAATTCTCTTCCTCGGGTTCATAATTCCTACAAAATCATTCCAATTTTGTCTTCTCTTTTCTCCCCCATCCCCTGTTCTGATTTAAGATCACTTGTTTTTCTTTTTCCGCTCGCAGAAACTCCATGGAAGATTTGTTTGCTGCAGAGCAGGAGTTTCATTTCTCGTCAGGGCTGAGCAAGCACACGGATCTTCAATTCATAGCCATGCGTGCAGTTCCGAAGGTCAGTTTACCGAATTGAGATGGAAAATTAGGTGTCAGTTGAATTAGAGTACTGATTATACTGGGATTTAGCTTGACTTTGAGTGTTAATTGAATGTGAATGCTCTTCAGTGACTATCTCAAGTATCGAGTTGATTTGGCGCAAGGGTAGAAGGTTTTATAACTTTTTTTATGAGAAGAATCATAGGATAATTAGTATGGTTTAGTTAATATTTAGTTTAGTTGTTAATTTAGATTAATTAGTATGTTAGAATCAATTAGTTAGACCTTGATAGCCATTTGGTTTTTAGTTTTTAATTTTTGAAAACTAAGCCAAACACCCCTCTCACCTCTATATATTTTCCTCTCACCTCTATATATTTTGCTTTCTTATCTACTTTTTAACCATGTTTTTAAAAATCAAACTAAATTTTGAAAATTAAAAAAAGTAATTTTTTTTTTTAGAATTTGGCTAAGAATTCAACTCTTAGAAAGATACAAACCATGGTAAGAAAATGGGAGGAAATAGGCTTAATTTTCAAAAACAAAAAATAAAAAACGTTACCAAACGGGGCCTTGATTGTTTGATTTTCTTGTAAGGCTATAAATAGCCACTTTAGATTGTATTAGGAAGCTTTTGAATCTTTTGAATATAGAATCTTTGTTCTTAGGGAGAGTTCTCACAACTCTAAGGGATGGATTTCCTCTGTTTGACCATGAATTTGACCTAATACCTGGTGCATCACTTTTAGATTTTTAATCATATATTAGAAAATACTATTCATTGCCATCCCATACTGATATGTTGAAGTAATAAAAAGAAACCACACAGCACTGTAGTAAATAGAATGGAGATTGAAACGAAGCAAGATTTATACTATACAAATCTTCTTAATAGACATTGTTTCGCACTAATTTGTAGGTACCATAGTATTACCGAGTCCTGTTACTTTAGATACCATATTACTTAAATGATTAATGGACCATATTAAATATTGTTGTGTGAACCAATGGGTTGAATATCAGTTTCCTCCTTCTAATGACCAGAAACTCATTATGTGGACTGGCAATAGCAAACTAATCTCAAACTAGTTTGAATTATTGTTTTAGAAGAGATATCAATTCAAACTAATGTAAGAATAAGTTGATTGGGTAGTGGCAAAGCATAACAACCTCAACACTAAGAACGTGGAAGCGGATGATGGCTAGAGATTCTAATCCCATATTGCCATTTGGTGAATGATGAAGGTTGTTATATGTTTGGAAAAGCAATTCTGCTTCAAGGAAAATTACCTCGGGCTGAAGCCTCAGCCATGTTCTCTTTGCTAGTTTATCATGTACTGTTTCTTCAATTCTCAACTTAAATGGCATTATGAAGTGTCTTCTTTGCTAGCTTACCATGTACCGTTTCTTCAAACCTAAATAGCGTTTTCTTGCTTGTATAATTTTATCACAATTCACGCATTCTATATATTGCTTTTAGATCACTTCCTGTGGAGGATTTCACTTCATTCTTATCAGCTTTAGAAACAAAGAATTTCATTGTTCAATAGTTGCTCTGTTTTCGTGGCAGATAGACTTGGGAGACGCCAGCTGCTAGCTGGCAGTGCCTTTATTACTTGGATTTCTCTTGCAGACATGAATTCCATGTCATGTAAGATTTATCACTCTTGTTACACTCAAAACTTACGTTTCTCTTTCATTTGCATTGCTTCTCTTCAAGAAGTTAAATTCTGAATTAGTACCTCTAGTGTCCACTGTATTTCTTTCTTCCAAAATGAAGGATGATGATATCCTAAGGGTACCCGCTTGATATTGCTCAGTTGCTGCAGAAACAAAGAAAGGGTTTCTATCAGTTTCAGACAAGAAAGACGGTTACTCATTCGTCTATCCATTTGGGTGGCAGGTACACTAATTATTCAGTTTTTTGTTTTTTTTTTCCCACTCCCTTACATTTGCACACACAATCCACTTCAAATTTATCTACTTGGCACAAGATGCATGTTTTGAAGTCTTTTTTCACTCGAGGAATGAGCAGGAAGTAGTCATTGATGGTCAAGATAAGGTATTCAAAGATGTAATTGAACCATTAGAAAGTGTCAGTGTCAATATGATTCCAACTAGCAAAGAAGATATTCGAGATTTTGGGTCCCCTCAACAGGTTAGCATTAAACTGTTGGAATAATGCATTAAGTTGGTAATTTAATTTTTAGGTAACTTCAGTATCTTATGGTTCAGGTTGCAGAAACTTTGATAAAGAAGGTTCTAGCTCCTTCTAATCAAAGAACGAAGTTAATCGAAGCATCAGAGGTTTGCCTGTCTATACTCTTGCCTGAGATTTTATCGTACTAGTTGCTATGGAGTAAAATAAATAGTAGCTGCAAATGAACTAACCATTAAATCTGATGCACAAGCATCACTCAACACTGCGGTGTGGAAGGTTCTCTGGGATATTTTTACGCAATTATACTTAGCAACATTGGAAATCAATCATCTAAAGTGGAAAATACATCCAAAAGTAAAACCAATTCATCTGTACAATCTGTTGAGTGAAGTCCATCTTCACCCCTTTATTCCAAACTCATGGCTACAAGTATTGATGGTAGAACCCACTCCAATGAGGCTGCTTGTCTCTTCTTCTTGGCCATTTATTACATTTCATATGGCTTTTAATTAACTAAAGGCTGTCTTTAAATGGCCCCCCTACAAGCTTTTGGAGAAATTCGAATTTGTCCCACTTGTCAAGCTTATATGGCTGTACAATTTTTCTAGCTTCAAAATTACAACGAAAAAAATATTTGTTACCCCGACCCCCACCCCGGCCGGAACATAAAAATGGTACGTTTTCACCTCTGCTATGCATTCATTGGTTTGTTGAATGATACAGCATGACGTTGATGGAAAAGCATACTACACATTTGAGTTTGTAGCTCAAGCTCCAAACTACACTCGCCATGCTCTTAGCACAATTGCTGTTGCCAATGGTATGGAACTTCCCTAGTCTTATTTTACTGTTGCTGGGGATCTTCTTGAGTTTTTCTTGTTTCATTCTATCACAGTATTTCAGAACAGTTTTGTTTTCGTCTTATTTTACTGTCAAACCATATAATCAAATGACATTCAAACTAATGGTATCGTACAGATCCACAAAGTAACTTCATTTTTAAACCTAACATAGTTCTTTCACCTTTTTGATGTCTCATTCTTCCATGGCAGGAAAATTCTACACTTTGACAACCGGAGCAAATGAGAGGAGATGGGAGAAAATGAAAGATAAATTGCACACAGTCGTTGATTCCTTCACGATTTCAAAAGTTTGA

mRNA sequence

ATGAAGAGGGTAGACATTGATTCGGTTTCGGACTCGAGTGATTTCAAGAAAGGGATAGTACAAGTTCCTCAAATTACTTGGCTTACTCTAAACTCCATGGAAGATTTGTTTGCTGCAGAGCAGGAGTTTCATTTCTCGTCAGGGCTGAGCAAGCACACGGATCTTCAATTCATAGCCATGCGTGCAGTTCCGAAGGTTGTTATATGTTTGGAAAAGCAATTCTGCTTCAAGGAAAATTACCTCGGGCTGAAGCCTCAGCCATATAGACTTGGGAGACGCCAGCTGCTAGCTGGCAGTGCCTTTATTACTTGGATTTCTCTTGCAGACATGAATTCCATGTCATTTGCTGCAGAAACAAAGAAAGGGTTTCTATCAGTTTCAGACAAGAAAGACGGTTACTCATTCGTCTATCCATTTGGGTGGCAGGAAGTAGTCATTGATGGTCAAGATAAGGTATTCAAAGATGTAATTGAACCATTAGAAAGTGTCAGTGTCAATATGATTCCAACTAGCAAAGAAGATATTCGAGATTTTGGGTCCCCTCAACAGGTTGCAGAAACTTTGATAAAGAAGGTTCTAGCTCCTTCTAATCAAAGAACGAAGTTAATCGAAGCATCAGAGCATGACGTTGATGGAAAAGCATACTACACATTTGAGTTTGTAGCTCAAGCTCCAAACTACACTCGCCATGCTCTTAGCACAATTGCTGTTGCCAATGGAAAATTCTACACTTTGACAACCGGAGCAAATGAGAGGAGATGGGAGAAAATGAAAGATAAATTGCACACAGTCGTTGATTCCTTCACGATTTCAAAAGTTTGA

Coding sequence (CDS)

ATGAAGAGGGTAGACATTGATTCGGTTTCGGACTCGAGTGATTTCAAGAAAGGGATAGTACAAGTTCCTCAAATTACTTGGCTTACTCTAAACTCCATGGAAGATTTGTTTGCTGCAGAGCAGGAGTTTCATTTCTCGTCAGGGCTGAGCAAGCACACGGATCTTCAATTCATAGCCATGCGTGCAGTTCCGAAGGTTGTTATATGTTTGGAAAAGCAATTCTGCTTCAAGGAAAATTACCTCGGGCTGAAGCCTCAGCCATATAGACTTGGGAGACGCCAGCTGCTAGCTGGCAGTGCCTTTATTACTTGGATTTCTCTTGCAGACATGAATTCCATGTCATTTGCTGCAGAAACAAAGAAAGGGTTTCTATCAGTTTCAGACAAGAAAGACGGTTACTCATTCGTCTATCCATTTGGGTGGCAGGAAGTAGTCATTGATGGTCAAGATAAGGTATTCAAAGATGTAATTGAACCATTAGAAAGTGTCAGTGTCAATATGATTCCAACTAGCAAAGAAGATATTCGAGATTTTGGGTCCCCTCAACAGGTTGCAGAAACTTTGATAAAGAAGGTTCTAGCTCCTTCTAATCAAAGAACGAAGTTAATCGAAGCATCAGAGCATGACGTTGATGGAAAAGCATACTACACATTTGAGTTTGTAGCTCAAGCTCCAAACTACACTCGCCATGCTCTTAGCACAATTGCTGTTGCCAATGGAAAATTCTACACTTTGACAACCGGAGCAAATGAGAGGAGATGGGAGAAAATGAAAGATAAATTGCACACAGTCGTTGATTCCTTCACGATTTCAAAAGTTTGA

Protein sequence

MKRVDIDSVSDSSDFKKGIVQVPQITWLTLNSMEDLFAAEQEFHFSSGLSKHTDLQFIAMRAVPKVVICLEKQFCFKENYLGLKPQPYRLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIEASEHDVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLHTVVDSFTISKV

Homology

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BLAST of HG10022252 vs. NCBI nr
Match: KAG7033025.1 (PsbP-like protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 383.6 bits (984), Expect = 1.4e-102
Identity = 199/246 (80.89%), Postives = 212/246 (86.18%), Query Frame = 0


Query: 28  LTLNSMEDLFAAEQEFHFSSGLSKHTDLQFIAMRAVPKVVICLEKQFCFKENYLGLKPQP 87
           L L+S+EDLFAAE+ F F SG SKHTDL  +   AVP       K  CF  +        
Sbjct: 49  LKLDSVEDLFAAERGFRFLSGPSKHTDLPVMVKLAVP-------KSLCFLAD-------- 108

Query: 88  YRLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVID 147
            RLGRRQLLAGS+FITWISLADMNSMSFAAE+KKGFLSV+DK DGYSF+YPFGWQEVVID
Sbjct: 109 -RLGRRQLLAGSSFITWISLADMNSMSFAAESKKGFLSVTDKTDGYSFLYPFGWQEVVID 168

Query: 148 GQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIEASE 207
           GQDKVFKDVIEPLESVSVN+IPTSKEDIRDFG PQQVAETLIKKVLAPSNQ+TKLIEASE
Sbjct: 169 GQDKVFKDVIEPLESVSVNLIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASE 228

Query: 208 HDVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLHTVVDS 267
           H+VDGKAYYTFEFVAQAPNYTRHALSTIAV+NGKFYTLTTGANERRWEKMKDKL TVVDS
Sbjct: 229 HEVDGKAYYTFEFVAQAPNYTRHALSTIAVSNGKFYTLTTGANERRWEKMKDKLRTVVDS 278

Query: 268 FTISKV 274
           FTIS V
Sbjct: 289 FTISNV 278

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BLAST of HG10022252 vs. NCBI nr
Match: XP_038890216.1 (psbP-like protein 1, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 362.8 bits (930), Expect = 2.5e-96
Identity = 189/229 (82.53%), Postives = 198/229 (86.46%), Query Frame = 0


Query: 45  FSSGLSKHTDLQFIAMRAVPKVVICLEKQFCFKENYLGLKPQPYRLGRRQLLAGSAFITW 104
           F + L +    +F+  RA    ++  E+      N  G   +  RLGRRQLLAGSAFITW
Sbjct: 15  FVNSLPQKLHGRFVCCRAGVSFLLRAEQAHGSSINAHGCSSED-RLGRRQLLAGSAFITW 74

Query: 105 ISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDKVFKDVIEPLESVS 164
           ISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDKVFKDVIEPLESVS
Sbjct: 75  ISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDKVFKDVIEPLESVS 134

Query: 165 VNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIEASEHDVDGKAYYTFEFVAQA 224
           VNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIEASEHDV+GKAYYTFEFVAQA
Sbjct: 135 VNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIEASEHDVNGKAYYTFEFVAQA 194

Query: 225 PNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLHTVVDSFTISKV 274
           PNYTRHALSTI VANGKFYTLTTGANERRWEKMKDKL TVVDSFTIS V
Sbjct: 195 PNYTRHALSTIVVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTISNV 242

[Close]

BLAST of HG10022252 vs. NCBI nr
Match: XP_023551141.1 (psbP-like protein 1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361.7 bits (927), Expect = 5.6e-96
Identity = 180/185 (97.30%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 89  RLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG 148
           RLGRRQLLAGSAFITWI LADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG
Sbjct: 67  RLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG 126

Query: 149 QDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIEASEH 208
           QDKVFKDVIEPLE+VSVNMIPTSKEDIRDFGSPQQ+AETLIKKVLAPSNQRTKLIEASEH
Sbjct: 127 QDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVLAPSNQRTKLIEASEH 186

Query: 209 DVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLHTVVDSF 268
           D+DGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKL TVVDSF
Sbjct: 187 DIDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSF 246

Query: 269 TISKV 274
           TISKV
Sbjct: 247 TISKV 251

[Close]

BLAST of HG10022252 vs. NCBI nr
Match: KAG7016254.1 (PsbP-like protein 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 361.7 bits (927), Expect = 5.6e-96
Identity = 180/185 (97.30%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 89  RLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG 148
           RLGRRQLLAGSAFITWI LADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG
Sbjct: 58  RLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG 117

Query: 149 QDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIEASEH 208
           QDKVFKDVIEPLE+VSVNMIPTSKEDIRDFGSPQQ+AETLIKKVLAPSNQRTKLIEASEH
Sbjct: 118 QDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVLAPSNQRTKLIEASEH 177

Query: 209 DVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLHTVVDSF 268
           D+DGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKL TVVDSF
Sbjct: 178 DIDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSF 237

Query: 269 TISKV 274
           TISKV
Sbjct: 238 TISKV 242

[Close]

BLAST of HG10022252 vs. NCBI nr
Match: XP_023551143.1 (psbP-like protein 1, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361.7 bits (927), Expect = 5.6e-96
Identity = 180/185 (97.30%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 89  RLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG 148
           RLGRRQLLAGSAFITWI LADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG
Sbjct: 58  RLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG 117

Query: 149 QDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIEASEH 208
           QDKVFKDVIEPLE+VSVNMIPTSKEDIRDFGSPQQ+AETLIKKVLAPSNQRTKLIEASEH
Sbjct: 118 QDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVLAPSNQRTKLIEASEH 177

Query: 209 DVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLHTVVDSF 268
           D+DGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKL TVVDSF
Sbjct: 178 DIDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSF 237

Query: 269 TISKV 274
           TISKV
Sbjct: 238 TISKV 242

[Close]

BLAST of HG10022252 vs. ExPASy Swiss-Prot
Match: P82538 (PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.2e-72
Identity = 131/180 (72.78%), Postives = 151/180 (83.89%), Query Frame = 0


Query: 92  RRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 151
           RR ++       WISL     +SFAAE+KKGFL+VSD KD Y+F+YPFGWQEVVI+GQDK
Sbjct: 50  RRLIVTFGVVAPWISLLSRAPLSFAAESKKGFLAVSDNKDAYAFLYPFGWQEVVIEGQDK 109

Query: 152 VFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIEASEHDVD 211
           V+KDVIEPLESVSVN++PTSK+ I++FG P+Q+AETLIKKVLAP NQ+T LI+ASEHDVD
Sbjct: 110 VYKDVIEPLESVSVNLVPTSKQTIKEFGPPKQIAETLIKKVLAPPNQKTTLIDASEHDVD 169

Query: 212 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLHTVVDSFTIS 271
           GK YY FEF  QA NYTRHAL TI V NG FYTLTTGANERRWEKMKD+LHTVVDSF I+
Sbjct: 170 GKTYYQFEFTVQARNYTRHALGTITVFNGNFYTLTTGANERRWEKMKDRLHTVVDSFKIT 229

[Close]

BLAST of HG10022252 vs. ExPASy Swiss-Prot
Match: O80634 (Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL1 PE=1 SV=2)

HSP 1 Score: 133.7 bits (335), Expect = 3.3e-30
Identity = 70/182 (38.46%), Postives = 99/182 (54.40%), Query Frame = 0


Query: 92  RRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 151
           RRQ L G    T ++ +   ++  A E  K +    D++DGYS+ YP  W+E      D 
Sbjct: 59  RRQALVGVG--TLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDS 118

Query: 152 VFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIEASEHDVD 211
            FKD    L++V V  IPT K DI + G  ++V   L+K   A  NQ   + +  E   D
Sbjct: 119 AFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVED 178

Query: 212 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLHTVVDSFTIS 271
           GK YYTFE+  + P Y   + +T+AV N ++YTL  GANERRW K+K +L  V DS  I 
Sbjct: 179 GKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKIL 238

Query: 272 KV 274
           ++
Sbjct: 239 QI 238

[Close]

BLAST of HG10022252 vs. ExPASy Swiss-Prot
Match: Q40407 (Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus OX=39639 GN=PSBP PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.9e-09
Identity = 58/208 (27.88%), Postives = 93/208 (44.71%), Query Frame = 0


Query: 89  RLGRRQLLAGSAFITWISLADMNSMSFA-----AETKKGFLSVSDKKDGYSFVYPFGW-- 148
           RL    L+ G+A  + +S AD      A      +T   F +V+   DG+  + P  W  
Sbjct: 58  RLALTILIGGAALGSRVSAADAAYGESANVFGKPKTNTDFQTVTG--DGFKILIPSKWNP 117

Query: 149 -QEVVIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQ--------------VAE 208
            +EV   GQ   ++D  +   +V V + PT K+ I+D+GSP+Q                +
Sbjct: 118 SKEVEFPGQVLRYEDNFDTTSNVGVMVNPTDKKSIKDYGSPEQFLSQVDYLLGKQAYFGK 177

Query: 209 TLIKKVLAPSNQRT-KLIEASEHDVDGKAYYTFEFV---AQAPNYTRHALSTIAVANGKF 268
           T+ +    P+  RT  ++E S   V GK YY+   +   A      +H L T  V++GK 
Sbjct: 178 TISEGGFEPNAVRTANILETSTPVVGGKDYYSIHVLTRTADGDEGGKHLLITATVSDGKL 237

Query: 269 YTLTTGANERRWEK-MKDKLHTVVDSFT 270
           Y     A ++RW K  K  + +   SF+
Sbjct: 238 YICKAQAGDKRWFKGAKKFVESAASSFS 263

[Close]

BLAST of HG10022252 vs. ExPASy Swiss-Prot
Match: O49080 (Oxygen-evolving enhancer protein 2, chloroplastic OS=Fritillaria agrestis OX=64177 GN=PSBP PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.0e-08
Identity = 49/177 (27.68%), Postives = 81/177 (45.76%), Query Frame = 0


Query: 117 AETKKGFLSVSDKKDGYSFVYPFGW---QEVVIDGQDKVFKDVIEPLESVSVNMIPTSKE 176
           A+T   FL  +   DG++ + P  W   +EV   GQ   ++D  +   +VSV + PTSK+
Sbjct: 90  AKTNTDFLPYTG--DGFNLLIPAKWNPSKEVEFPGQVLRYEDNFDVTSNVSVTVTPTSKK 149

Query: 177 DIRDFGSPQQVAET----LIKKVLA----------PSNQRT-KLIEASEHDVDGKAYYTF 236
            I D+G+P++   T    L K+  +          P +  T  ++E S   V GK YY  
Sbjct: 150 SITDYGTPEEFLSTVDYLLGKQAYSGKTASEGGFDPDSVATANILEVSTPVVGGKQYYNI 209

Query: 237 EFV---AQAPNYTRHALSTIAVANGKFYTLTTGANERRWEK-MKDKLHTVVDSFTIS 272
             +   A      +H + +  V +GK Y     A ++RW K  K  + +   SF ++
Sbjct: 210 SVLTRTADGDEGGKHHVISATVTDGKLYICKAQAGDKRWFKGAKKFVESTTTSFNVA 264

[Close]

BLAST of HG10022252 vs. ExPASy Swiss-Prot
Match: P12302 (Oxygen-evolving enhancer protein 2, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSBP PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-07
Identity = 63/246 (25.61%), Postives = 107/246 (43.50%), Query Frame = 0


Query: 56  QFIAMRAVPKVVIC-LEKQFCFKENYLGLKPQPYRLGRRQLLAGSAFITWISLADM---N 115
           ++ A+   P  ++C  +KQ   + N L       RL    L+  +A  + +S AD     
Sbjct: 27  RYQAVSIKPNQIVCKAQKQDDNEANVLN-SGVSRRLALTVLIGAAAVGSKVSPADAAYGE 86

Query: 116 SMSFAAETKKGFLSVSDKKDGYSFVYPFGW---QEVVIDGQDKVFKDVIEPLESVSVNMI 175
           + +   + KK    +    DG+  + P  W   +E    GQ   ++D  +   ++SV + 
Sbjct: 87  AANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPSKEKEFPGQVLRYEDNFDATSNLSVLVQ 146

Query: 176 PTSKEDIRDFGSPQ----QVAETLIKK---------------VLAPSNQRTKLIEASEHD 235
           PT K+ I DFGSP+    QV   L K+               V+A +N    ++E+S   
Sbjct: 147 PTDKKSITDFGSPEDFLSQVDYLLGKQAYFGKTDSEGGFDSGVVASAN----VLESSTPV 206

Query: 236 VDGKAYYTFEFV---AQAPNYTRHALSTIAVANGKFYTLTTGANERRWEK-MKDKLHTVV 272
           VDGK YY+   +   A      +H +    V +GK Y     A ++RW K  K  + +  
Sbjct: 207 VDGKQYYSITVLTRTADGDEGGKHQVIAATVKDGKLYICKAQAGDKRWFKGAKKFVESAT 266

[Close]

BLAST of HG10022252 vs. ExPASy TrEMBL
Match: A0A6J1FHM7 (psbP-like protein 1, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445433 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 7.9e-96
Identity = 179/185 (96.76%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 89  RLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG 148
           RLGRRQLLAGSAFITWI LADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG
Sbjct: 67  RLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG 126

Query: 149 QDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIEASEH 208
           QDKVFKDVIEPLE+VSVNMIPTSKEDIRDFGSPQQ+AETLIKKVLAPSNQRTKLIEASEH
Sbjct: 127 QDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVLAPSNQRTKLIEASEH 186

Query: 209 DVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLHTVVDSF 268
           D+DGKAYYTFEFVAQAPNYTRHALSTI VANGKFYTLTTGANERRWEKMKDKL TVVDSF
Sbjct: 187 DIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANERRWEKMKDKLRTVVDSF 246

Query: 269 TISKV 274
           TISKV
Sbjct: 247 TISKV 251

[Close]

BLAST of HG10022252 vs. ExPASy TrEMBL
Match: A0A6J1FN44 (psbP-like protein 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445433 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 7.9e-96
Identity = 179/185 (96.76%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 89  RLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG 148
           RLGRRQLLAGSAFITWI LADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG
Sbjct: 58  RLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG 117

Query: 149 QDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIEASEH 208
           QDKVFKDVIEPLE+VSVNMIPTSKEDIRDFGSPQQ+AETLIKKVLAPSNQRTKLIEASEH
Sbjct: 118 QDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVLAPSNQRTKLIEASEH 177

Query: 209 DVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLHTVVDSF 268
           D+DGKAYYTFEFVAQAPNYTRHALSTI VANGKFYTLTTGANERRWEKMKDKL TVVDSF
Sbjct: 178 DIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANERRWEKMKDKLRTVVDSF 237

Query: 269 TISKV 274
           TISKV
Sbjct: 238 TISKV 242

[Close]

BLAST of HG10022252 vs. ExPASy TrEMBL
Match: A0A6J1JVV0 (psbP-like protein 1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489333 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.3e-95
Identity = 179/185 (96.76%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 89  RLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG 148
           RLGRRQLLAGSAFITWI LADMN MSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG
Sbjct: 67  RLGRRQLLAGSAFITWIYLADMNFMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG 126

Query: 149 QDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIEASEH 208
           QDKVFKDVIEPLE+VSVNMIPTSKEDIRDFGSPQQ+AETLIKKVLAPSNQRTKLIEASEH
Sbjct: 127 QDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVLAPSNQRTKLIEASEH 186

Query: 209 DVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLHTVVDSF 268
           D+DGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKL TVVDSF
Sbjct: 187 DIDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSF 246

Query: 269 TISKV 274
           TISKV
Sbjct: 247 TISKV 251

[Close]

BLAST of HG10022252 vs. ExPASy TrEMBL
Match: A0A6J1JSB4 (psbP-like protein 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489333 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.3e-95
Identity = 179/185 (96.76%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 89  RLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG 148
           RLGRRQLLAGSAFITWI LADMN MSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG
Sbjct: 58  RLGRRQLLAGSAFITWIYLADMNFMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG 117

Query: 149 QDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIEASEH 208
           QDKVFKDVIEPLE+VSVNMIPTSKEDIRDFGSPQQ+AETLIKKVLAPSNQRTKLIEASEH
Sbjct: 118 QDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVLAPSNQRTKLIEASEH 177

Query: 209 DVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLHTVVDSF 268
           D+DGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKL TVVDSF
Sbjct: 178 DIDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSF 237

Query: 269 TISKV 274
           TISKV
Sbjct: 238 TISKV 242

[Close]

BLAST of HG10022252 vs. ExPASy TrEMBL
Match: A0A0A0KS54 (PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G505230 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.9e-94
Identity = 177/185 (95.68%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 89  RLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG 148
           RLGRRQLL+GSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG
Sbjct: 52  RLGRRQLLSGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDG 111

Query: 149 QDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIEASEH 208
           QDKVFKDVIEPLE+VSVN+IPTSKEDIRDFG PQQVAETLIKKVLAPSNQ+TKLIEASEH
Sbjct: 112 QDKVFKDVIEPLENVSVNLIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEH 171

Query: 209 DVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLHTVVDSF 268
           DV+GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKL TVVDSF
Sbjct: 172 DVNGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSF 231

Query: 269 TISKV 274
           TIS V
Sbjct: 232 TISSV 236

[Close]

BLAST of HG10022252 vs. TAIR 10
Match: AT3G55330.1 (PsbP-like protein 1 )

HSP 1 Score: 274.6 bits (701), Expect = 8.4e-74
Identity = 131/180 (72.78%), Postives = 151/180 (83.89%), Query Frame = 0


Query: 92  RRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 151
           RR ++       WISL     +SFAAE+KKGFL+VSD KD Y+F+YPFGWQEVVI+GQDK
Sbjct: 50  RRLIVTFGVVAPWISLLSRAPLSFAAESKKGFLAVSDNKDAYAFLYPFGWQEVVIEGQDK 109

Query: 152 VFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIEASEHDVD 211
           V+KDVIEPLESVSVN++PTSK+ I++FG P+Q+AETLIKKVLAP NQ+T LI+ASEHDVD
Sbjct: 110 VYKDVIEPLESVSVNLVPTSKQTIKEFGPPKQIAETLIKKVLAPPNQKTTLIDASEHDVD 169

Query: 212 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLHTVVDSFTIS 271
           GK YY FEF  QA NYTRHAL TI V NG FYTLTTGANERRWEKMKD+LHTVVDSF I+
Sbjct: 170 GKTYYQFEFTVQARNYTRHALGTITVFNGNFYTLTTGANERRWEKMKDRLHTVVDSFKIT 229

[Close]

BLAST of HG10022252 vs. TAIR 10
Match: AT2G39470.1 (PsbP-like protein 2 )

HSP 1 Score: 133.7 bits (335), Expect = 2.3e-31
Identity = 70/182 (38.46%), Postives = 99/182 (54.40%), Query Frame = 0


Query: 92  RRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 151
           RRQ L G    T ++ +   ++  A E  K +    D++DGYS+ YP  W+E      D 
Sbjct: 59  RRQALVGVG--TLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDS 118

Query: 152 VFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIEASEHDVD 211
            FKD    L++V V  IPT K DI + G  ++V   L+K   A  NQ   + +  E   D
Sbjct: 119 AFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVED 178

Query: 212 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLHTVVDSFTIS 271
           GK YYTFE+  + P Y   + +T+AV N ++YTL  GANERRW K+K +L  V DS  I 
Sbjct: 179 GKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKIL 238

Query: 272 KV 274
           ++
Sbjct: 239 QI 238

[Close]

BLAST of HG10022252 vs. TAIR 10
Match: AT2G39470.2 (PsbP-like protein 2 )

HSP 1 Score: 133.7 bits (335), Expect = 2.3e-31
Identity = 70/182 (38.46%), Postives = 99/182 (54.40%), Query Frame = 0


Query: 92  RRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 151
           RRQ L G    T ++ +   ++  A E  K +    D++DGYS+ YP  W+E      D 
Sbjct: 51  RRQALVGVG--TLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDS 110

Query: 152 VFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIEASEHDVD 211
            FKD    L++V V  IPT K DI + G  ++V   L+K   A  NQ   + +  E   D
Sbjct: 111 AFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVED 170

Query: 212 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLHTVVDSFTIS 271
           GK YYTFE+  + P Y   + +T+AV N ++YTL  GANERRW K+K +L  V DS  I 
Sbjct: 171 GKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKIL 230

Query: 272 KV 274
           ++
Sbjct: 231 QI 230

[Close]

BLAST of HG10022252 vs. TAIR 10
Match: AT2G39470.3 (PsbP-like protein 2 )

HSP 1 Score: 68.9 bits (167), Expect = 7.0e-12
Identity = 39/116 (33.62%), Postives = 57/116 (49.14%), Query Frame = 0


Query: 92  RRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 151
           RRQ L G    T ++ +   ++  A E  K +    D++DGYS+ YP  W+E      D 
Sbjct: 51  RRQALVGVG--TLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDS 110

Query: 152 VFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIEASE 208
            FKD    L++V V  IPT K DI + G  ++V   L+K   A  NQ   + +  E
Sbjct: 111 AFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKE 164

[Close]

BLAST of HG10022252 vs. TAIR 10
Match: AT1G06680.1 (photosystem II subunit P-1 )

HSP 1 Score: 55.8 bits (133), Expect = 6.1e-08
Identity = 44/163 (26.99%), Postives = 70/163 (42.94%), Query Frame = 0


Query: 131 DGYSFVYPFGW---QEVVIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQ----Q 190
           DG+    P  W   +E+   GQ   F+D  +   +++V + PT K+ I D+GSP+    Q
Sbjct: 101 DGFKVQVPAKWNPSKEIEYPGQVLRFEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQ 160

Query: 191 VAETLIKKVLAPSN-----------QRTKLIEASEHDVDGKAYYTFEFV---AQAPNYTR 250
           V   L K+                     ++E+S  +V GK YY    +   A      +
Sbjct: 161 VNYLLGKQAYFGETASEGGFDNNAVATANILESSSQEVGGKPYYYLSVLTRTADGDEGGK 220

Query: 251 HALSTIAVANGKFYTLTTGANERRWEKMKDK-LHTVVDSFTIS 272
           H L T  V  GK Y     A ++RW K   K + +   SF+++
Sbjct: 221 HQLITATVNGGKLYICKAQAGDKRWFKGARKFVESAATSFSVA 263

The following BLAST results are available for this feature:

BLAST of HG10022252 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033025.1	1.4e-102	80.89	PsbP-like protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyr...	[more]
XP_038890216.1	2.5e-96	82.53	psbP-like protein 1, chloroplastic isoform X2 [Benincasa hispida]	[more]
XP_023551141.1	5.6e-96	97.30	psbP-like protein 1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG7016254.1	5.6e-96	97.30	PsbP-like protein 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023551143.1	5.6e-96	97.30	psbP-like protein 1, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10022252 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P82538	1.2e-72	72.78	PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 ...	[more]
O80634	3.3e-30	38.46	Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis t...	[more]
Q40407	1.9e-09	27.88	Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus O...	[more]
O49080	6.0e-08	27.68	Oxygen-evolving enhancer protein 2, chloroplastic OS=Fritillaria agrestis OX=641...	[more]
P12302	1.3e-07	25.61	Oxygen-evolving enhancer protein 2, chloroplastic OS=Spinacia oleracea OX=3562 G...	[more]

BLAST of HG10022252 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FHM7	7.9e-96	96.76	psbP-like protein 1, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1FN44	7.9e-96	96.76	psbP-like protein 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JVV0	1.3e-95	96.76	psbP-like protein 1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1JSB4	1.3e-95	96.76	psbP-like protein 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A0A0KS54	1.9e-94	95.68	PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G505230 PE=4 S...	[more]

BLAST of HG10022252 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55330.1	8.4e-74	72.78	PsbP-like protein 1	[more]
AT2G39470.1	2.3e-31	38.46	PsbP-like protein 2	[more]
AT2G39470.2	2.3e-31	38.46	PsbP-like protein 2	[more]
AT2G39470.3	7.0e-12	33.62	PsbP-like protein 2	[more]
AT1G06680.1	6.1e-08	26.99	photosystem II subunit P-1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 122..270 e-value: 1.4E-50 score: 171.5
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 110..271 e-value: 4.0E-50 score: 172.1
None	No IPR available	PANTHER	PTHR31407:SF4	PSBP-LIKE PROTEIN 1, CHLOROPLASTIC	coord: 82..271
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 82..271
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 126..270

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10022252.1	HG10022252.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005509	calcium ion binding