Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGGTCGCCGACTATCTGTATATGAACACCTCACTCTAAAGAAGAAGGCCCCAAGAAATGCTGTTGAGACATCCAAGGGACCATTGACGGTTAACGTCCCTGACCTAACAGAGGACGATAATCTTCGTATTCGACCTTCGATTCCACATCACACATCCCCTGCAAACTGTTGTTGATCCGCCCAGCTACATAGTGGTTCATCCTCGCAAGGAGTTGAACAATCAACTAGGATTCCTGCTTTTGTTCTCCCAAAGAACTACTCTGGAGTTGTAGACGAGGTCGAGCTACTTAGCAAAAGCTTTGCACTATGGCAAGAACTCGGCCAATGCCGTCCGGAGGGGGAACTTGGGTTCAATGACCCTTCAGAAGCTATCACTCAAGCCCTCTCCGAGTTGCATAATGTAGGTTATGTTCTTGTTGTTTCTTCCCTATCTTTTATAACCTTTTTTTACCATTACTAATCAAGTTTCCCTTTCTAGATCTTCATTCGAGTTTCTGTGTCAACTATGAGTATGGCCAACCACATCAACTTTCTTGAGCAAAACTATGTTCCCAAGGCCGAGCTAGCTCAGGCTCAAGCTATTTTAGCTCGTGCCAATCAACAATTAGATGAGGTTAGACGCGAGCTGGAATCTTGTCAAGCTAATATTACCACACTCAAGGCTCAATTGGACGAGGCCGAATCTTGCCTCGCTAATCCTGAATATCTAGCTGAGGAGTTCAAGAAGACAGATGCATATACTAAAATGCAACATGATATAATGGAACGTGCGGTTATTTGGTCGATTCAACGATTATCTCGATGCCATCCTGAGATAGATTTTGGATTCTTGTATGATGAATTCATCGCAATGCGCAATGACCCTAACATGTTCGGTTATGATTCCAACTGCAGGACCTTTTAG
mRNA sequence
ATGGGAGGTCGCCGACTATCTGTATATGAACACCTCACTCTAAAGAAGAAGGCCCCAAGAAATGCTGTTGAGACATCCAAGGGACCATTGACGGTTAACGTCCCTGACCTAACAGAGGACGATAATCTTCGAGTTGAACAATCAACTAGGATTCCTGCTTTTGTTCTCCCAAAGAACTACTCTGGAGTTGTAGACGAGGTCGAGCTACTTAGCAAAAGCTTTGCACTATGGCAAGAACTCGGCCAATGCCGTCCGGAGGGGGAACTTGGGTTCAATGACCCTTCAGAAGCTATCACTCAAGCCCTCTCCGAGTTGCATAATATCTTCATTCGAGTTTCTGTGTCAACTATGAGTATGGCCAACCACATCAACTTTCTTGAGCAAAACTATGTTCCCAAGGCCGAGCTAGCTCAGGCTCAAGCTATTTTAGCTCGTGCCAATCAACAATTAGATGAGGTTAGACGCGAGCTGGAATCTTGTCAAGCTAATATTACCACACTCAAGGCTCAATTGGACGAGGCCGAATCTTGCCTCGCTAATCCTGAATATCTAGCTGAGGAGTTCAAGAAGACAGATGCATATACTAAAATGCAACATGATATAATGGAACGTGCGGTTATTTGGTCGATTCAACGATTATCTCGATGCCATCCTGAGATAGATTTTGGATTCTTGTATGATGAATTCATCGCAATGCGCAATGACCCTAACATGTTCGGTTATGATTCCAACTGCAGGACCTTTTAG
Coding sequence (CDS)
ATGGGAGGTCGCCGACTATCTGTATATGAACACCTCACTCTAAAGAAGAAGGCCCCAAGAAATGCTGTTGAGACATCCAAGGGACCATTGACGGTTAACGTCCCTGACCTAACAGAGGACGATAATCTTCGAGTTGAACAATCAACTAGGATTCCTGCTTTTGTTCTCCCAAAGAACTACTCTGGAGTTGTAGACGAGGTCGAGCTACTTAGCAAAAGCTTTGCACTATGGCAAGAACTCGGCCAATGCCGTCCGGAGGGGGAACTTGGGTTCAATGACCCTTCAGAAGCTATCACTCAAGCCCTCTCCGAGTTGCATAATATCTTCATTCGAGTTTCTGTGTCAACTATGAGTATGGCCAACCACATCAACTTTCTTGAGCAAAACTATGTTCCCAAGGCCGAGCTAGCTCAGGCTCAAGCTATTTTAGCTCGTGCCAATCAACAATTAGATGAGGTTAGACGCGAGCTGGAATCTTGTCAAGCTAATATTACCACACTCAAGGCTCAATTGGACGAGGCCGAATCTTGCCTCGCTAATCCTGAATATCTAGCTGAGGAGTTCAAGAAGACAGATGCATATACTAAAATGCAACATGATATAATGGAACGTGCGGTTATTTGGTCGATTCAACGATTATCTCGATGCCATCCTGAGATAGATTTTGGATTCTTGTATGATGAATTCATCGCAATGCGCAATGACCCTAACATGTTCGGTTATGATTCCAACTGCAGGACCTTTTAG
Protein sequence
MGGRRLSVYEHLTLKKKAPRNAVETSKGPLTVNVPDLTEDDNLRVEQSTRIPAFVLPKNYSGVVDEVELLSKSFALWQELGQCRPEGELGFNDPSEAITQALSELHNIFIRVSVSTMSMANHINFLEQNYVPKAELAQAQAILARANQQLDEVRRELESCQANITTLKAQLDEAESCLANPEYLAEEFKKTDAYTKMQHDIMERAVIWSIQRLSRCHPEIDFGFLYDEFIAMRNDPNMFGYDSNCRTF
Homology
BLAST of HG10021966 vs. NCBI nr
Match:
KAA0033894.1 (uncharacterized protein E6C27_scaffold43059G00810 [Cucumis melo var. makuwa])
HSP 1 Score: 136.7 bits (343), Expect = 2.7e-28
Identity = 86/142 (60.56%), Postives = 95/142 (66.90%), Query Frame = 0
Query: 1 MGGRRLSVYEHLTLKKKAPRNAVETSKGPLTVNVPDLTEDDNLRVEQSTRIPAFVLPKNY 60
MGG RLS+YE L L KKAPRNAVETS+GP T + + VEQST I AFVL
Sbjct: 126 MGGPRLSLYERLAL-KKAPRNAVETSEGPSTSHQLH-SGSTTQGVEQSTGIRAFVL---- 185
Query: 61 SGVVDEVELLSKSFALWQELGQCRPEGELGFND-PSEAITQALSELHNIFIRVSVSTMSM 120
L QELGQ RPEGE+GFND PSEAITQAL +LHNIFI+ SVSTM +
Sbjct: 186 ---------------LEQELGQSRPEGEIGFNDGPSEAITQALYKLHNIFIQASVSTMGL 245
Query: 121 ANHINFLEQNYVPKAELAQAQA 142
N INFL+QNYVPK ELAQ QA
Sbjct: 246 VNLINFLQQNYVPKTELAQLQA 246
BLAST of HG10021966 vs. NCBI nr
Match:
XP_031737089.1 (uncharacterized protein LOC105435920 isoform X5 [Cucumis sativus])
HSP 1 Score: 132.9 bits (333), Expect = 3.8e-27
Identity = 81/189 (42.86%), Postives = 109/189 (57.67%), Query Frame = 0
Query: 47 QSTRIPAFVLPKNYSGVVDEVELLSKSFALWQELGQCRPEGELGFNDPSEAITQALSELH 106
Q I FV +YS VDEVE L ++F +W+ L + EGE GF DPS+ L +
Sbjct: 136 QLPNINPFVYQGSYSSEVDEVEYLKRTFDIWRGLVEFPTEGESGFQDPSQGFILGLHDFR 195
Query: 107 NIFIRVSVSTMSMANHINFLEQNYVPKAELAQAQAILARANQQLDEVRRELESCQAN--- 166
F R S+S M + +N L NYVP+ E L RAN++L+E + EL CQA+
Sbjct: 196 RAFTRFSISFGRMGDELNHLYLNYVPREE-------LMRANRRLEEAKVELGLCQASSQV 255
Query: 167 -ITTLKAQLDEAESCLANPEYLAEEFKKTDAYTKMQHDIMERAVIWSIQRLSRCHPEIDF 226
I LKAQL EA+S L++ + LAE+F KT+ + MQ+ IME V WS+++ S HP IDF
Sbjct: 256 KIDKLKAQLTEAKSELSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGIDF 315
Query: 227 GFLYDEFIA 232
FL F A
Sbjct: 316 SFLPIRFKA 317
BLAST of HG10021966 vs. NCBI nr
Match:
XP_031737075.1 (uncharacterized protein LOC105435920 isoform X1 [Cucumis sativus])
HSP 1 Score: 132.9 bits (333), Expect = 3.8e-27
Identity = 81/189 (42.86%), Postives = 109/189 (57.67%), Query Frame = 0
Query: 47 QSTRIPAFVLPKNYSGVVDEVELLSKSFALWQELGQCRPEGELGFNDPSEAITQALSELH 106
Q I FV +YS VDEVE L ++F +W+ L + EGE GF DPS+ L +
Sbjct: 167 QLPNINPFVYQGSYSSEVDEVEYLKRTFDIWRGLVEFPTEGESGFQDPSQGFILGLHDFR 226
Query: 107 NIFIRVSVSTMSMANHINFLEQNYVPKAELAQAQAILARANQQLDEVRRELESCQAN--- 166
F R S+S M + +N L NYVP+ E L RAN++L+E + EL CQA+
Sbjct: 227 RAFTRFSISFGRMGDELNHLYLNYVPREE-------LMRANRRLEEAKVELGLCQASSQV 286
Query: 167 -ITTLKAQLDEAESCLANPEYLAEEFKKTDAYTKMQHDIMERAVIWSIQRLSRCHPEIDF 226
I LKAQL EA+S L++ + LAE+F KT+ + MQ+ IME V WS+++ S HP IDF
Sbjct: 287 KIDKLKAQLTEAKSELSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGIDF 346
Query: 227 GFLYDEFIA 232
FL F A
Sbjct: 347 SFLPIRFKA 348
BLAST of HG10021966 vs. NCBI nr
Match:
XP_031737083.1 (uncharacterized protein LOC105435920 isoform X3 [Cucumis sativus])
HSP 1 Score: 132.9 bits (333), Expect = 3.8e-27
Identity = 81/189 (42.86%), Postives = 109/189 (57.67%), Query Frame = 0
Query: 47 QSTRIPAFVLPKNYSGVVDEVELLSKSFALWQELGQCRPEGELGFNDPSEAITQALSELH 106
Q I FV +YS VDEVE L ++F +W+ L + EGE GF DPS+ L +
Sbjct: 153 QLPNINPFVYQGSYSSEVDEVEYLKRTFDIWRGLVEFPTEGESGFQDPSQGFILGLHDFR 212
Query: 107 NIFIRVSVSTMSMANHINFLEQNYVPKAELAQAQAILARANQQLDEVRRELESCQAN--- 166
F R S+S M + +N L NYVP+ E L RAN++L+E + EL CQA+
Sbjct: 213 RAFTRFSISFGRMGDELNHLYLNYVPREE-------LMRANRRLEEAKVELGLCQASSQV 272
Query: 167 -ITTLKAQLDEAESCLANPEYLAEEFKKTDAYTKMQHDIMERAVIWSIQRLSRCHPEIDF 226
I LKAQL EA+S L++ + LAE+F KT+ + MQ+ IME V WS+++ S HP IDF
Sbjct: 273 KIDKLKAQLTEAKSELSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGIDF 332
Query: 227 GFLYDEFIA 232
FL F A
Sbjct: 333 SFLPIRFKA 334
BLAST of HG10021966 vs. NCBI nr
Match:
KGN66039.2 (hypothetical protein Csa_020117 [Cucumis sativus])
HSP 1 Score: 132.9 bits (333), Expect = 3.8e-27
Identity = 81/189 (42.86%), Postives = 109/189 (57.67%), Query Frame = 0
Query: 47 QSTRIPAFVLPKNYSGVVDEVELLSKSFALWQELGQCRPEGELGFNDPSEAITQALSELH 106
Q I FV +YS VDEVE L ++F +W+ L + EGE GF DPS+ L +
Sbjct: 152 QLPNINPFVYQGSYSSEVDEVEYLKRTFDIWRGLVEFPTEGESGFQDPSQGFILGLHDFR 211
Query: 107 NIFIRVSVSTMSMANHINFLEQNYVPKAELAQAQAILARANQQLDEVRRELESCQAN--- 166
F R S+S M + +N L NYVP+ E L RAN++L+E + EL CQA+
Sbjct: 212 RAFTRFSISFGRMGDELNHLYLNYVPREE-------LMRANRRLEEAKVELGLCQASSQV 271
Query: 167 -ITTLKAQLDEAESCLANPEYLAEEFKKTDAYTKMQHDIMERAVIWSIQRLSRCHPEIDF 226
I LKAQL EA+S L++ + LAE+F KT+ + MQ+ IME V WS+++ S HP IDF
Sbjct: 272 KIDKLKAQLTEAKSELSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGIDF 331
Query: 227 GFLYDEFIA 232
FL F A
Sbjct: 332 SFLPIRFKA 333
BLAST of HG10021966 vs. ExPASy TrEMBL
Match:
A0A5A7SRR9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43059G00810 PE=4 SV=1)
HSP 1 Score: 136.7 bits (343), Expect = 1.3e-28
Identity = 86/142 (60.56%), Postives = 95/142 (66.90%), Query Frame = 0
Query: 1 MGGRRLSVYEHLTLKKKAPRNAVETSKGPLTVNVPDLTEDDNLRVEQSTRIPAFVLPKNY 60
MGG RLS+YE L L KKAPRNAVETS+GP T + + VEQST I AFVL
Sbjct: 126 MGGPRLSLYERLAL-KKAPRNAVETSEGPSTSHQLH-SGSTTQGVEQSTGIRAFVL---- 185
Query: 61 SGVVDEVELLSKSFALWQELGQCRPEGELGFND-PSEAITQALSELHNIFIRVSVSTMSM 120
L QELGQ RPEGE+GFND PSEAITQAL +LHNIFI+ SVSTM +
Sbjct: 186 ---------------LEQELGQSRPEGEIGFNDGPSEAITQALYKLHNIFIQASVSTMGL 245
Query: 121 ANHINFLEQNYVPKAELAQAQA 142
N INFL+QNYVPK ELAQ QA
Sbjct: 246 VNLINFLQQNYVPKTELAQLQA 246
BLAST of HG10021966 vs. ExPASy TrEMBL
Match:
A0A5A7SSF9 (Secretion protein HlyD family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43059G00750 PE=4 SV=1)
HSP 1 Score: 128.6 bits (322), Expect = 3.5e-26
Identity = 79/189 (41.80%), Postives = 108/189 (57.14%), Query Frame = 0
Query: 47 QSTRIPAFVLPKNYSGVVDEVELLSKSFALWQELGQCRPEGELGFNDPSEAITQALSELH 106
Q I FV + S VDE+E L ++F +W+ L + EGE GF DPS+ L +
Sbjct: 148 QLPNINPFVYQGSCSSEVDEIEYLKRTFDIWRGLVEFPMEGESGFQDPSQGFILGLHDFR 207
Query: 107 NIFIRVSVSTMSMANHINFLEQNYVPKAELAQAQAILARANQQLDEVRRELESCQAN--- 166
F R S+S M + +N L NYVP+ E L RAN++L+E + EL CQA+
Sbjct: 208 RAFTRFSISFGRMGDELNHLYLNYVPREE-------LMRANRRLEEAKVELGLCQASSQV 267
Query: 167 -ITTLKAQLDEAESCLANPEYLAEEFKKTDAYTKMQHDIMERAVIWSIQRLSRCHPEIDF 226
I LKAQL EA+S L++ + LAE+F KT+ + MQ+ IME V WS+++ S HP IDF
Sbjct: 268 KIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGIDF 327
Query: 227 GFLYDEFIA 232
FL F A
Sbjct: 328 SFLPIRFKA 329
BLAST of HG10021966 vs. ExPASy TrEMBL
Match:
A0A5D3BQ22 (Secretion protein HlyD family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00610 PE=4 SV=1)
HSP 1 Score: 128.6 bits (322), Expect = 3.5e-26
Identity = 79/189 (41.80%), Postives = 108/189 (57.14%), Query Frame = 0
Query: 47 QSTRIPAFVLPKNYSGVVDEVELLSKSFALWQELGQCRPEGELGFNDPSEAITQALSELH 106
Q I FV + S VDE+E L ++F +W+ L + EGE GF DPS+ L +
Sbjct: 97 QLPNINPFVYQGSCSSEVDEIEYLKRTFDIWRGLVEFPMEGESGFQDPSQGFILGLHDFR 156
Query: 107 NIFIRVSVSTMSMANHINFLEQNYVPKAELAQAQAILARANQQLDEVRRELESCQAN--- 166
F R S+S M + +N L NYVP+ E L RAN++L+E + EL CQA+
Sbjct: 157 RAFTRFSISFGRMGDELNHLYLNYVPREE-------LMRANRRLEEAKVELGLCQASSQV 216
Query: 167 -ITTLKAQLDEAESCLANPEYLAEEFKKTDAYTKMQHDIMERAVIWSIQRLSRCHPEIDF 226
I LKAQL EA+S L++ + LAE+F KT+ + MQ+ IME V WS+++ S HP IDF
Sbjct: 217 KIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGIDF 276
Query: 227 GFLYDEFIA 232
FL F A
Sbjct: 277 SFLPIRFKA 278
BLAST of HG10021966 vs. ExPASy TrEMBL
Match:
A0A1S3C5B2 (uncharacterized protein LOC103497199 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497199 PE=4 SV=1)
HSP 1 Score: 128.6 bits (322), Expect = 3.5e-26
Identity = 79/189 (41.80%), Postives = 108/189 (57.14%), Query Frame = 0
Query: 47 QSTRIPAFVLPKNYSGVVDEVELLSKSFALWQELGQCRPEGELGFNDPSEAITQALSELH 106
Q I FV + S VDE+E L ++F +W+ L + EGE GF DPS+ L +
Sbjct: 158 QLPNINPFVYQGSCSSEVDEIEYLKRTFDIWRGLVEFPMEGESGFQDPSQGFILGLHDFR 217
Query: 107 NIFIRVSVSTMSMANHINFLEQNYVPKAELAQAQAILARANQQLDEVRRELESCQAN--- 166
F R S+S M + +N L NYVP+ E L RAN++L+E + EL CQA+
Sbjct: 218 RAFTRFSISFGRMGDELNHLYLNYVPREE-------LMRANRRLEEAKVELGLCQASSQV 277
Query: 167 -ITTLKAQLDEAESCLANPEYLAEEFKKTDAYTKMQHDIMERAVIWSIQRLSRCHPEIDF 226
I LKAQL EA+S L++ + LAE+F KT+ + MQ+ IME V WS+++ S HP IDF
Sbjct: 278 KIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGIDF 337
Query: 227 GFLYDEFIA 232
FL F A
Sbjct: 338 SFLPIRFKA 339
BLAST of HG10021966 vs. ExPASy TrEMBL
Match:
A0A1S4E2A9 (uncharacterized protein LOC103497199 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497199 PE=4 SV=1)
HSP 1 Score: 128.6 bits (322), Expect = 3.5e-26
Identity = 79/189 (41.80%), Postives = 108/189 (57.14%), Query Frame = 0
Query: 47 QSTRIPAFVLPKNYSGVVDEVELLSKSFALWQELGQCRPEGELGFNDPSEAITQALSELH 106
Q I FV + S VDE+E L ++F +W+ L + EGE GF DPS+ L +
Sbjct: 113 QLPNINPFVYQGSCSSEVDEIEYLKRTFDIWRGLVEFPMEGESGFQDPSQGFILGLHDFR 172
Query: 107 NIFIRVSVSTMSMANHINFLEQNYVPKAELAQAQAILARANQQLDEVRRELESCQAN--- 166
F R S+S M + +N L NYVP+ E L RAN++L+E + EL CQA+
Sbjct: 173 RAFTRFSISFGRMGDELNHLYLNYVPREE-------LMRANRRLEEAKVELGLCQASSQV 232
Query: 167 -ITTLKAQLDEAESCLANPEYLAEEFKKTDAYTKMQHDIMERAVIWSIQRLSRCHPEIDF 226
I LKAQL EA+S L++ + LAE+F KT+ + MQ+ IME V WS+++ S HP IDF
Sbjct: 233 KIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGIDF 292
Query: 227 GFLYDEFIA 232
FL F A
Sbjct: 293 SFLPIRFKA 294
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0033894.1 | 2.7e-28 | 60.56 | uncharacterized protein E6C27_scaffold43059G00810 [Cucumis melo var. makuwa] | [more] |
XP_031737089.1 | 3.8e-27 | 42.86 | uncharacterized protein LOC105435920 isoform X5 [Cucumis sativus] | [more] |
XP_031737075.1 | 3.8e-27 | 42.86 | uncharacterized protein LOC105435920 isoform X1 [Cucumis sativus] | [more] |
XP_031737083.1 | 3.8e-27 | 42.86 | uncharacterized protein LOC105435920 isoform X3 [Cucumis sativus] | [more] |
KGN66039.2 | 3.8e-27 | 42.86 | hypothetical protein Csa_020117 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SRR9 | 1.3e-28 | 60.56 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7SSF9 | 3.5e-26 | 41.80 | Secretion protein HlyD family protein OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
A0A5D3BQ22 | 3.5e-26 | 41.80 | Secretion protein HlyD family protein OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
A0A1S3C5B2 | 3.5e-26 | 41.80 | uncharacterized protein LOC103497199 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A1S4E2A9 | 3.5e-26 | 41.80 | uncharacterized protein LOC103497199 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
Match Name | E-value | Identity | Description | |