HG10021939 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTACTCACTATGCAAATAGGACGGTTGAAGAAAACTTTGATCTTCTTGATTTAAAACAAGCAAAAGCTGGATTGGCGAAATATAATCATTTTGTGTTGAACAAGACTATTGCTGAAACGTATGAGGCTGTTGTTGATGTGTTGCGGGCAAATGGCCTAATGGTCATCGCTGACAATCACGTTGGCCAACCAAGATGGTGTTGCTCTCTTGACGATGGCAATGGCTTCTTTGGAAACCGCAATTTTGACCCTAAAAAATGGCTACAAGGTCTTAGCTTAGTTGCTCGATGCTTTCGCAACAAATCTACGGTATGTAACATCAAGAGATTTTCTTAA ATGTTTACTCACTATGCAAATAGGACGGTTGAAGAAAACTTTGATCTTCTTGATTTAAAACAAGCAAAAGCTGGATTGGCGAAATATAATCATTTTGTGTTGAACAAGACTATTGCTGAAACGTATGAGGCTGTTGTTGATGTGTTGCGGGCAAATGGCCTAATGGTCATCGCTGACAATCACGTTGGCCAACCAAGATGGTGTTGCTCTCTTGACGATGGCAATGGCTTCTTTGGAAACCGCAATTTTGACCCTAAAAAATGGCTACAAGGTCTTAGCTTAGTTGCTCGATGCTTTCGCAACAAATCTACGGTATGTAACATCAAGAGATTTTCTTAA ATGTTTACTCACTATGCAAATAGGACGGTTGAAGAAAACTTTGATCTTCTTGATTTAAAACAAGCAAAAGCTGGATTGGCGAAATATAATCATTTTGTGTTGAACAAGACTATTGCTGAAACGTATGAGGCTGTTGTTGATGTGTTGCGGGCAAATGGCCTAATGGTCATCGCTGACAATCACGTTGGCCAACCAAGATGGTGTTGCTCTCTTGACGATGGCAATGGCTTCTTTGGAAACCGCAATTTTGACCCTAAAAAATGGCTACAAGGTCTTAGCTTAGTTGCTCGATGCTTTCGCAACAAATCTACGGTATGTAACATCAAGAGATTTTCTTAA MFTHYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFRNKSTVCNIKRFS Homology
BLAST of HG10021939 vs. NCBI nr
Match: XP_008437725.1 (PREDICTED: uncharacterized protein LOC103483072 [Cucumis melo]) HSP 1 Score: 202.6 bits (514), Expect = 1.8e-48 Identity = 93/107 (86.92%), Postives = 100/107 (93.46%), Query Frame = 0
BLAST of HG10021939 vs. NCBI nr
Match: KAA0042710.1 (major extracellular endoglucanase-like [Cucumis melo var. makuwa]) HSP 1 Score: 196.8 bits (499), Expect = 9.8e-47 Identity = 91/105 (86.67%), Postives = 98/105 (93.33%), Query Frame = 0
BLAST of HG10021939 vs. NCBI nr
Match: KAA0042711.1 (major extracellular endoglucanase-like [Cucumis melo var. makuwa]) HSP 1 Score: 196.8 bits (499), Expect = 9.8e-47 Identity = 91/105 (86.67%), Postives = 98/105 (93.33%), Query Frame = 0
BLAST of HG10021939 vs. NCBI nr
Match: KAA0042713.1 (major extracellular endoglucanase-like [Cucumis melo var. makuwa]) HSP 1 Score: 196.4 bits (498), Expect = 1.3e-46 Identity = 90/105 (85.71%), Postives = 98/105 (93.33%), Query Frame = 0
BLAST of HG10021939 vs. NCBI nr
Match: KAA0042712.1 (major extracellular endoglucanase-like [Cucumis melo var. makuwa]) HSP 1 Score: 196.4 bits (498), Expect = 1.3e-46 Identity = 90/105 (85.71%), Postives = 98/105 (93.33%), Query Frame = 0
BLAST of HG10021939 vs. ExPASy Swiss-Prot
Match: C0HLA0 (Glycosyl hydrolase 5 family protein OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 8.7e-22 Identity = 47/103 (45.63%), Postives = 64/103 (62.14%), Query Frame = 0
BLAST of HG10021939 vs. ExPASy TrEMBL
Match: A0A1S3AV94 (uncharacterized protein LOC103483072 OS=Cucumis melo OX=3656 GN=LOC103483072 PE=4 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 8.6e-49 Identity = 93/107 (86.92%), Postives = 100/107 (93.46%), Query Frame = 0
BLAST of HG10021939 vs. ExPASy TrEMBL
Match: A0A5A7TH83 (Mannan endo-1,4-beta-mannosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002080 PE=3 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 4.7e-47 Identity = 91/105 (86.67%), Postives = 98/105 (93.33%), Query Frame = 0
BLAST of HG10021939 vs. ExPASy TrEMBL
Match: A0A5A7TMC9 (Mannan endo-1,4-beta-mannosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002090 PE=3 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 4.7e-47 Identity = 91/105 (86.67%), Postives = 98/105 (93.33%), Query Frame = 0
BLAST of HG10021939 vs. ExPASy TrEMBL
Match: A0A5A7THG1 (Mannan endo-1,4-beta-mannosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002110 PE=3 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 6.2e-47 Identity = 90/105 (85.71%), Postives = 98/105 (93.33%), Query Frame = 0
BLAST of HG10021939 vs. ExPASy TrEMBL
Match: A0A5A7TH29 (Mannan endo-1,4-beta-mannosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002100 PE=3 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 6.2e-47 Identity = 90/105 (85.71%), Postives = 98/105 (93.33%), Query Frame = 0
BLAST of HG10021939 vs. TAIR 10
Match: AT3G26140.1 (Cellulase (glycosyl hydrolase family 5) protein ) HSP 1 Score: 90.5 bits (223), Expect = 9.2e-19 Identity = 41/99 (41.41%), Postives = 58/99 (58.59%), Query Frame = 0
BLAST of HG10021939 vs. TAIR 10
Match: AT1G13130.1 (Cellulase (glycosyl hydrolase family 5) protein ) HSP 1 Score: 89.0 bits (219), Expect = 2.7e-18 Identity = 41/99 (41.41%), Postives = 56/99 (56.57%), Query Frame = 0
BLAST of HG10021939 vs. TAIR 10
Match: AT3G26130.1 (Cellulase (glycosyl hydrolase family 5) protein ) HSP 1 Score: 87.0 bits (214), Expect = 1.0e-17 Identity = 37/96 (38.54%), Postives = 61/96 (63.54%), Query Frame = 0
BLAST of HG10021939 vs. TAIR 10
Match: AT5G17500.1 (Glycosyl hydrolase superfamily protein ) HSP 1 Score: 81.6 bits (200), Expect = 4.3e-16 Identity = 37/99 (37.37%), Postives = 56/99 (56.57%), Query Frame = 0
BLAST of HG10021939 vs. TAIR 10
Match: AT5G16700.1 (Glycosyl hydrolase superfamily protein ) HSP 1 Score: 80.1 bits (196), Expect = 1.2e-15 Identity = 37/93 (39.78%), Postives = 56/93 (60.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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