HG10021813 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021813
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ran-binding protein 1 homolog a
Location	Chr05: 17080180 .. 17083005 (-)
RNA-Seq Expression	HG10021813
Synteny	HG10021813

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAGCACCGATACCGAACGCAGAGAAGAGGAGGAGGCTCCGGCCGGAGAGGATGAAGACACTGGAGCTCAAGTTGCCCCAATCGTCAAGTTGGAGGAGGTCACCGTCACCACCGGTGAAGAAAATGAAGACGCTATTCTCGATCTGTATGCTTTTCTCTTTACTTCTTTATCTGATCTACTCAATCTAGGTTTTAATCTGATTGCTTTTTTCATGTGGGTTATTCGTATTCGTTGTTTTAGGAAATCCAAACTGTACCGATTCGATAAGGATGGAAATCAGTGAAGGAGAGGGGTGCTGGTACTGTTAAGTTTTTGAAACATAAGGACTGGCAAGTTTCGCCTTGTTATGACAGTCTAAAACCCTCAAGATCTGCGCTAACCATCTAGGTTTGTTCTCACTTCTCTACTTGTTCCTTCGCGTATATATCAAGCTTCTTTGAGTTTATGTTTTCCCCCCCTTGATTTAGCTTTAGTTTTTTCATTTTATCGTTTGATTTGTCGTGATTGTAGTACTTCCATCAATGACGGTTCAAGAACACGTTGGAAATGAAAGTCGTGCGTGTGGCATGCGACTGACTTTGCTGATGGTGATTGAAATGAGCTTTTTTTGTATCAGATTCCCATCTATTGATAGTGAGTACAACTCTGAATCTTTCTTCTCCCTAAATCTTGGCTGTAGATTGACTTATAGACTCTCTGGTATATTGATATCTGATCTGGTAGTGGGCAATGTGACTGTTAAAAATGATCTTATATTGTTTTCACGTTTTGTGTTTTCTTTTCCCCTTCCGAATAAATTATATGTTAGAGCTCTCTAGTTGTGTAATTGTGTCCGGGTCAAAGTACCGCTGGGATAATTCTTTTCACTGACAATCTTTTTCTTTTTCCTTTTTTCCTTCTGTATCTGCTTTTAATGCGGTTTGGTTTGTACAATTTTTCATCATAAGACATTACAGTATTCTCATGGTACGCTTTTATGTTGAACGTTTTCTTGATGCCTATCAATACTTGGTGCTGCTAAAGATTAAAGAGTGGGATTTATTCTTAAAATCGATTGTGTAGTATGTTCATCATGGTAACTTTGTCCTTGAAATTTTTACTTCTCTGCTGATTTTTACTGTTGACTCTATCCATAAAAATATATATTTTTATTTTCATTAACATTTGTTTTCTCTATTTAAGAAATGGGAAGTTATCTATTCCTAGATCCATCTCTGTTAATACGCACAGTTTCTTCAGTTATTTAATTCTGTACATGTCAACGTTGTATGCCAGTTGTTTTGGCAATGGAAGAGTTGGAGTCGGTGCCTGAAAAGAGGAAGTATATATATATTGCAATTTTATATAATGATAGTTCGCTAATAAAATTTGATAGAAAAGGTAGGTGAAGGGTGAGTGAGTGGTTTCATTGGTGAATAGCCAGTTGTAATTTTACTTTTAGAGGATTTTAAGTGATGATACCTAGAAGAGAAAGGCTGGAAGACAGTAATGGTAGGGATGGGATGGAAATTTCCCAGTTAACAATTATCTGTGGCTGGTGTTGCCCTTTGAGGTGTGTAATTGATACATCGAATATGTTCTGGTTTTCATCCTTAATGCAGTGTGCCTCTCTGCACGAGATACATCGAAACTGTTTTGATGTAGCTTAGGTAATCTTAATTTTATTTAGACCTCCCTTTCCATGCATCACAAGCTTCCAATGATGTCTTCAATGACTATTAGTCCAAATTTATCTAGGAATTAGGTTCTTTATCATTGTAATTCTCAATAAGATAGGAAACCCTGGATCTAATAACCCATCCAAGAGGCTGGTCCTTTTCTTTCCCTTTCTTGAGGGTGGTGAGCGAGGAAGTCTTCTGAATAAATTTAAGCATCATCTCTGCCATGGCTTCATATCATTGTGTCAGCTAGGAACTCAATCTGTGACTTCGAAATTAACTCAAGTCAAGGGTCTTGCAGTTATCTTTTATCTGTTCCTGTTTTTATATTTACTAAATTATCAATCTTAACCACACAGTATAATGAATTAGTTTCTGGTCATATTTGACTTACAAAGCATGGAGACAGGCATTTTGGCAGCTTAGATATAAAAGACACTAAATGACATGCATTGATTTCTAGATTTTAGAGGCTTTGACACGCTGCACATTGTATTCATTGTTTTATTTTTAGTGTATTTGAAATGGGAAAAATCTGCTGTTACCATTTGTATTTCACAGCCCTTCAGCTCATTTTATTATTTTTCTATTTATTTTACTTCTCCTACTCTAGTATCGTTCAGTCTAAAATAGTTTCTCATCTAGTCATTCTTAATTTTCATTTATTTCTTCCGAAGTGTCTTGCATGTCTTTGGACTTTTCTACGCATGCTTGTTCCCCCCCCCCCCCCCCCCCTTGGATACTAAATCTTTTCTTTATACTAGACTGCAAACCTTCATGGAGAAACGTTCCCAGATCCTCTAGTCCCAAAAGATAGATATAGTTTATTAACTGTGCTAATCAGCTTTTCCCCCTTGGTTATTTACTTTTTATTATTATTAATTCTTTTTTGGGTATTATAGACTGCAAGACCTTCATGGAAACATTCCAAGAAGTTGCCGAGTCCCAAAAGAAAAAGAGGAAAATAAAGATGCATCAGCAGCAGCCGTCTACTTGAAAAATTGAGTGTTGAAGACGAAAAGAAAGCCGAAGATAAAGCTGAAGATAAAGCTGAGGACACACCTGTAAAATCTAAGGAAGAGGATAAACCTGAGGGCGGGAAGGGAAATCGGATGCAGAGAAAGACTAGGAGCCTGTTTCCTCTGCCAGATAATATACGGTAG

mRNA sequence

ATGGCGAGCACCGATACCGAACGCAGAGAAGAGGAGGAGGCTCCGGCCGGAGAGGATGAAGACACTGGAGCTCAAGTTGCCCCAATCGTCAAGTTGGAGGAGGTCACCGTCACCACCGGTGAAGAAAATGAAGACGCTATTCTCGATCTCAGCCGTCTACTTGAAAAATTGAGTGTTGAAGACGAAAAGAAAGCCGAAGATAAAGCTGAAGATAAAGCTGAGGACACACCTGTAAAATCTAAGGAAGAGGATAAACCTGAGGGCGGGAAGGGAAATCGGATGCAGAGAAAGACTAGGAGCCTGTTTCCTCTGCCAGATAATATACGGTAG

Coding sequence (CDS)

ATGGCGAGCACCGATACCGAACGCAGAGAAGAGGAGGAGGCTCCGGCCGGAGAGGATGAAGACACTGGAGCTCAAGTTGCCCCAATCGTCAAGTTGGAGGAGGTCACCGTCACCACCGGTGAAGAAAATGAAGACGCTATTCTCGATCTCAGCCGTCTACTTGAAAAATTGAGTGTTGAAGACGAAAAGAAAGCCGAAGATAAAGCTGAAGATAAAGCTGAGGACACACCTGTAAAATCTAAGGAAGAGGATAAACCTGAGGGCGGGAAGGGAAATCGGATGCAGAGAAAGACTAGGAGCCTGTTTCCTCTGCCAGATAATATACGGTAG

Protein sequence

MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLSRLLEKLSVEDEKKAEDKAEDKAEDTPVKSKEEDKPEGGKGNRMQRKTRSLFPLPDNIR

Homology

[Close]

BLAST of HG10021813 vs. NCBI nr
Match: XP_008457357.1 (PREDICTED: ran-binding protein 1 homolog a [Cucumis melo] >XP_011658664.2 ran-binding protein 1 homolog a [Cucumis sativus] >KAA0060033.1 ran-binding protein 1-like protein a-like [Cucumis melo var. makuwa] >KGN65824.1 hypothetical protein Csa_023197 [Cucumis sativus] >TYJ97290.1 ran-binding protein 1-like protein a-like [Cucumis melo var. makuwa])

HSP 1 Score: 92.4 bits (228), Expect = 2.5e-15
Identity = 81/211 (38.39%), Postives = 85/211 (40.28%), Query Frame = 0


Query: 1   MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDL---------- 60
           MAS+DTERREEEEAPA EDEDTGAQVAPIVKLE V VTTGEE+EDAILDL          
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  ------------------------------------------------------------ 92
                                                                       
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

[Close]

BLAST of HG10021813 vs. NCBI nr
Match: XP_038894876.1 (ran-binding protein 1 homolog a [Benincasa hispida])

HSP 1 Score: 91.7 bits (226), Expect = 4.3e-15
Identity = 52/66 (78.79%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 1  MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLSRLLEKLSVE 60
          MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDL   L +   +
Sbjct: 1  MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61 DEKKAE 67
            +  E
Sbjct: 61 GNQWKE 66

[Close]

BLAST of HG10021813 vs. NCBI nr
Match: XP_022150930.1 (ran-binding protein 1 homolog b-like [Momordica charantia])

HSP 1 Score: 88.2 bits (217), Expect = 4.8e-14
Identity = 79/219 (36.07%), Postives = 86/219 (39.27%), Query Frame = 0


Query: 1   MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDL---------- 60
           MASTDTERREEEEAP GEDEDTGAQVAPIVKLE V VTTGEE+EDAILDL          
Sbjct: 1   MASTDTERREEEEAPVGEDEDTGAQVAPIVKLEAVAVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  ------------------------------------------------------------ 100
                                                                       
Sbjct: 61  GNQWKERGAGTVKFLKHKESGKVRLVMRQSKTLKICANHLVLSSMSVQEHAGNEKSCVWH 120

[Close]

BLAST of HG10021813 vs. NCBI nr
Match: XP_023519267.1 (ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 86.3 bits (212), Expect = 1.8e-13
Identity = 79/208 (37.98%), Postives = 83/208 (39.90%), Query Frame = 0


Query: 1   MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDL---------- 60
           MAS DTERREEEEAPA EDEDTGAQVAPIVKLEEV VTTGEENEDAILDL          
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  ------------------------------------------------------------ 89
                                                                       
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

[Close]

BLAST of HG10021813 vs. NCBI nr
Match: KAG6583353.1 (Ran-binding protein 1-like c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019122.1 Ran-binding protein 1-like c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 84.7 bits (208), Expect = 5.3e-13
Identity = 79/208 (37.98%), Postives = 82/208 (39.42%), Query Frame = 0


Query: 1   MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDL---------- 60
           MAS DTERREEEEAPA EDEDTGAQVAPIVKLEEV VTTGEENEDAILDL          
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  ------------------------------------------------------------ 89
                                                                       
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

[Close]

BLAST of HG10021813 vs. ExPASy Swiss-Prot
Match: Q9LMK7 (Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.0e-11
Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 7  ERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLSRLL 55
          E R+EEEA A EDEDTGAQVAPIV+LEEV VTTGEE+EDA+LDL   L
Sbjct: 9  EHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKL 56

[Close]

BLAST of HG10021813 vs. ExPASy Swiss-Prot
Match: P92985 (Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 7.4e-10
Identity = 39/67 (58.21%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 1  MASTDTER-REEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLSRLLEKLSV 60
          MAST+ ER   E+E    EDEDTGAQVAPIV+LEEV VTTGEE+EDA+LDL   + +   
Sbjct: 1  MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDK 60

Query: 61 EDEKKAE 67
          E  +  E
Sbjct: 61 EGNQWKE 67

[Close]

BLAST of HG10021813 vs. ExPASy Swiss-Prot
Match: Q8RWG8 (Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-09
Identity = 37/62 (59.68%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 5  DTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLSRLLEKLSVEDEKK 64
          + E R+EEE  A EDEDTGAQVAPIV+LEEV VTTGEE+ED ILDL   L +   +  + 
Sbjct: 9  ERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQW 68

Query: 65 AE 67
           E
Sbjct: 69 KE 70

[Close]

BLAST of HG10021813 vs. ExPASy TrEMBL
Match: A0A5A7UVN5 (Ran-binding protein 1-like protein a-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00850 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.2e-15
Identity = 81/211 (38.39%), Postives = 85/211 (40.28%), Query Frame = 0


Query: 1   MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDL---------- 60
           MAS+DTERREEEEAPA EDEDTGAQVAPIVKLE V VTTGEE+EDAILDL          
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  ------------------------------------------------------------ 92
                                                                       
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

[Close]

BLAST of HG10021813 vs. ExPASy TrEMBL
Match: A0A0A0LXN6 (RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532320 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.2e-15
Identity = 81/211 (38.39%), Postives = 85/211 (40.28%), Query Frame = 0


Query: 1   MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDL---------- 60
           MAS+DTERREEEEAPA EDEDTGAQVAPIVKLE V VTTGEE+EDAILDL          
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  ------------------------------------------------------------ 92
                                                                       
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

[Close]

BLAST of HG10021813 vs. ExPASy TrEMBL
Match: A0A1S3C5A9 (ran-binding protein 1 homolog a OS=Cucumis melo OX=3656 GN=LOC103497065 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.2e-15
Identity = 81/211 (38.39%), Postives = 85/211 (40.28%), Query Frame = 0


Query: 1   MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDL---------- 60
           MAS+DTERREEEEAPA EDEDTGAQVAPIVKLE V VTTGEE+EDAILDL          
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  ------------------------------------------------------------ 92
                                                                       
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

[Close]

BLAST of HG10021813 vs. ExPASy TrEMBL
Match: A0A6J1D9U4 (ran-binding protein 1 homolog b-like OS=Momordica charantia OX=3673 GN=LOC111018963 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.3e-14
Identity = 79/219 (36.07%), Postives = 86/219 (39.27%), Query Frame = 0


Query: 1   MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDL---------- 60
           MASTDTERREEEEAP GEDEDTGAQVAPIVKLE V VTTGEE+EDAILDL          
Sbjct: 1   MASTDTERREEEEAPVGEDEDTGAQVAPIVKLEAVAVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  ------------------------------------------------------------ 100
                                                                       
Sbjct: 61  GNQWKERGAGTVKFLKHKESGKVRLVMRQSKTLKICANHLVLSSMSVQEHAGNEKSCVWH 120

[Close]

BLAST of HG10021813 vs. ExPASy TrEMBL
Match: A0A6J1HKC3 (ran-binding protein 1 homolog a-like OS=Cucurbita moschata OX=3662 GN=LOC111464892 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.3e-13
Identity = 79/211 (37.44%), Postives = 83/211 (39.34%), Query Frame = 0


Query: 1   MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDL---------- 60
           MAS DTERREEEEAPA EDEDTGAQVAPIVKLEEV VTTGEENEDAILDL          
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  ------------------------------------------------------------ 89
                                                                       
Sbjct: 61  GNQWKERGAGTVKFLKHRETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

[Close]

BLAST of HG10021813 vs. TAIR 10
Match: AT1G07140.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 2.1e-12
Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 7  ERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLSRLL 55
          E R+EEEA A EDEDTGAQVAPIV+LEEV VTTGEE+EDA+LDL   L
Sbjct: 9  EHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKL 56

[Close]

BLAST of HG10021813 vs. TAIR 10
Match: AT5G58590.1 (RAN binding protein 1 )

HSP 1 Score: 64.7 bits (156), Expect = 5.3e-11
Identity = 39/67 (58.21%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 1  MASTDTER-REEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLSRLLEKLSV 60
          MAST+ ER   E+E    EDEDTGAQVAPIV+LEEV VTTGEE+EDA+LDL   + +   
Sbjct: 1  MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDK 60

Query: 61 EDEKKAE 67
          E  +  E
Sbjct: 61 EGNQWKE 67

[Close]

BLAST of HG10021813 vs. TAIR 10
Match: AT2G30060.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 9.0e-11
Identity = 37/62 (59.68%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 5  DTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLSRLLEKLSVEDEKK 64
          + E R+EEE  A EDEDTGAQVAPIV+LEEV VTTGEE+ED ILDL   L +   +  + 
Sbjct: 9  ERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQW 68

Query: 65 AE 67
           E
Sbjct: 69 KE 70

The following BLAST results are available for this feature:

BLAST of HG10021813 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457357.1	2.5e-15	38.39	PREDICTED: ran-binding protein 1 homolog a [Cucumis melo] >XP_011658664.2 ran-bi...	[more]
XP_038894876.1	4.3e-15	78.79	ran-binding protein 1 homolog a [Benincasa hispida]	[more]
XP_022150930.1	4.8e-14	36.07	ran-binding protein 1 homolog b-like [Momordica charantia]	[more]
XP_023519267.1	1.8e-13	37.98	ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo]	[more]
KAG6583353.1	5.3e-13	37.98	Ran-binding protein 1-like c, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]

BLAST of HG10021813 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LMK7	3.0e-11	77.08	Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 ...	[more]
P92985	7.4e-10	58.21	Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 ...	[more]
Q8RWG8	1.3e-09	59.68	Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 ...	[more]

BLAST of HG10021813 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UVN5	1.2e-15	38.39	Ran-binding protein 1-like protein a-like OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A0A0LXN6	1.2e-15	38.39	RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532320 PE=4...	[more]
A0A1S3C5A9	1.2e-15	38.39	ran-binding protein 1 homolog a OS=Cucumis melo OX=3656 GN=LOC103497065 PE=4 SV=...	[more]
A0A6J1D9U4	2.3e-14	36.07	ran-binding protein 1 homolog b-like OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1HKC3	3.3e-13	37.44	ran-binding protein 1 homolog a-like OS=Cucurbita moschata OX=3662 GN=LOC1114648...	[more]

BLAST of HG10021813 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07140.1	2.1e-12	77.08	Pleckstrin homology (PH) domain superfamily protein	[more]
AT5G58590.1	5.3e-11	58.21	RAN binding protein 1	[more]
AT2G30060.1	9.0e-11	59.68	Pleckstrin homology (PH) domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 1..50
None	No IPR available	PANTHER	PTHR23138:SF143	RAN-BINDING PROTEIN 1 HOMOLOG A-LIKE ISOFORM X1	coord: 1..50

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021813.1	HG10021813.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046907	intracellular transport
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0005096	GTPase activator activity