HG10021794 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021794
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like
Location	Chr05: 16794716 .. 16795372 (-)
RNA-Seq Expression	HG10021794
Synteny	HG10021794

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCAGTGTCTGAAGCCGGCGGCGGTGGGGCGGCGGAGGGCACGGCGGAAGGGTCATCAAGCGGTGGTGGGTCGTCAGCGGCTGCGGCTCCACCGAGCCGTTATGAATCTCAGAAACGAAGGGATTGGAACACTTTCTTACAGTATTTGAAGAACCACAAGCCGCCACTGTGTTTAGCGCGTTGCAGTGGCGCTCACGTGATCGAATTCTTGAAGTATTTGGATCAGTTCGGAAAAACTAAGGTCCATGGTTCGGGCTGCCCCTATTTCGGTCACCCAAACCCACCTGCCCCTTGCCCCTGCCCGCTCAAGCAAGCCTGGGGCAGCCTCGACGCCTTGATCGGCCGTCTCCGAGCCGCTTACGAGGAGAACGGCGGCCGCCCTGAATCCAACCCATTTGCCGCACGTGCCGTCAGGATTTATCTCCGTGAGGTTCGAGAAGCTCAGGCTAAAGCCAGAGGGATTCCCTACGAGAAAAAGAAGCGGAAAAGACCCTCCGCCTCCGCCCCTCCGCCGGACCCCCAACTTCCCTCAGAGACTAGTACCTCCACCGCCGCCGCCGGAGATCATCAGCCTGAAACAACCGCTGGTGGTGGCGATGATCCCACGGATGCTCCTCCGCCGTCCACAACCGCCGCTTCCACCACCGTATAG

mRNA sequence

ATGGATTCAGTGTCTGAAGCCGGCGGCGGTGGGGCGGCGGAGGGCACGGCGGAAGGGTCATCAAGCGGTGGTGGGTCGTCAGCGGCTGCGGCTCCACCGAGCCGTTATGAATCTCAGAAACGAAGGGATTGGAACACTTTCTTACAGTATTTGAAGAACCACAAGCCGCCACTGTGTTTAGCGCGTTGCAGTGGCGCTCACGTGATCGAATTCTTGAAGTATTTGGATCAGTTCGGAAAAACTAAGGTCCATGGTTCGGGCTGCCCCTATTTCGGTCACCCAAACCCACCTGCCCCTTGCCCCTGCCCGCTCAAGCAAGCCTGGGGCAGCCTCGACGCCTTGATCGGCCGTCTCCGAGCCGCTTACGAGGAGAACGGCGGCCGCCCTGAATCCAACCCATTTGCCGCACGTGCCGTCAGGATTTATCTCCGTGAGGTTCGAGAAGCTCAGGCTAAAGCCAGAGGGATTCCCTACGAGAAAAAGAAGCGGAAAAGACCCTCCGCCTCCGCCCCTCCGCCGGACCCCCAACTTCCCTCAGAGACTAGTACCTCCACCGCCGCCGCCGGAGATCATCAGCCTGAAACAACCGCTGGTGGTGGCGATGATCCCACGGATGCTCCTCCGCCGTCCACAACCGCCGCTTCCACCACCGTATAG

Coding sequence (CDS)

ATGGATTCAGTGTCTGAAGCCGGCGGCGGTGGGGCGGCGGAGGGCACGGCGGAAGGGTCATCAAGCGGTGGTGGGTCGTCAGCGGCTGCGGCTCCACCGAGCCGTTATGAATCTCAGAAACGAAGGGATTGGAACACTTTCTTACAGTATTTGAAGAACCACAAGCCGCCACTGTGTTTAGCGCGTTGCAGTGGCGCTCACGTGATCGAATTCTTGAAGTATTTGGATCAGTTCGGAAAAACTAAGGTCCATGGTTCGGGCTGCCCCTATTTCGGTCACCCAAACCCACCTGCCCCTTGCCCCTGCCCGCTCAAGCAAGCCTGGGGCAGCCTCGACGCCTTGATCGGCCGTCTCCGAGCCGCTTACGAGGAGAACGGCGGCCGCCCTGAATCCAACCCATTTGCCGCACGTGCCGTCAGGATTTATCTCCGTGAGGTTCGAGAAGCTCAGGCTAAAGCCAGAGGGATTCCCTACGAGAAAAAGAAGCGGAAAAGACCCTCCGCCTCCGCCCCTCCGCCGGACCCCCAACTTCCCTCAGAGACTAGTACCTCCACCGCCGCCGCCGGAGATCATCAGCCTGAAACAACCGCTGGTGGTGGCGATGATCCCACGGATGCTCCTCCGCCGTCCACAACCGCCGCTTCCACCACCGTATAG

Protein sequence

MDSVSEAGGGGAAEGTAEGSSSGGGSSAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLCLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSASAPPPDPQLPSETSTSTAAAGDHQPETTAGGGDDPTDAPPPSTTAASTTV

Homology

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BLAST of HG10021794 vs. NCBI nr
Match: XP_038893975.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Benincasa hispida])

HSP 1 Score: 382.5 bits (981), Expect = 2.5e-102
Identity = 205/224 (91.52%), Postives = 209/224 (93.30%), Query Frame = 0


Query: 1   MDSVSEAGGGGAAE-GTAEGSSSGGGSSAA--AAPPSRYESQKRRDWNTFLQYLKNHKPP 60
           MDSVSE GGGGA+E GTAEGSS GGG  +A  AAPPSRYESQKRRDWNTFLQYLKNHKPP
Sbjct: 1   MDSVSEPGGGGASEGGTAEGSSGGGGGGSAPTAAPPSRYESQKRRDWNTFLQYLKNHKPP 60

Query: 61  LCLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGR 120
           LCLARCSGAHVIEFLKYLDQFGKTKVH S CPYFGHPNPPAPCPCPLKQAWGSLDALIGR
Sbjct: 61  LCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIGR 120

Query: 121 LRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP--SASAPPPDP 180
           LRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP  SASAPPPDP
Sbjct: 121 LRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPAASASAPPPDP 180

Query: 181 QLPSETSTSTAAAGDHQPETTA-GGGDDPTDAPPPSTTAASTTV 219
           Q+ SETSTSTAAAGDHQ ETT+ GGGDDPT APPPSTTAASTTV
Sbjct: 181 QVVSETSTSTAAAGDHQAETTSGGGGDDPTGAPPPSTTAASTTV 224

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BLAST of HG10021794 vs. NCBI nr
Match: XP_008457336.1 (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucumis melo])

HSP 1 Score: 353.6 bits (906), Expect = 1.2e-93
Identity = 189/223 (84.75%), Postives = 201/223 (90.13%), Query Frame = 0


Query: 1   MDSVSEAGGGGAAEGTAEGSSS--GGGSSAAA--APPSRYESQKRRDWNTFLQYLKNHKP 60
           MDSVSE+GGGGA+E T EG SS  G G++AAA  APPSRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSVSESGGGGASESTGEGCSSATGTGTAAAAGVAPPSRYESQKRRDWNTFLQYLKNHKP 60

Query: 61  PLCLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120
           PLCLARCSGAHVIEFLKYLDQFGKTKVH S CPYFGHPNPPAPCPCPLKQAWGSLDALIG
Sbjct: 61  PLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSASAPPPDPQ 180
           RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP+ +APPP+  
Sbjct: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPAPTAPPPE-- 180

Query: 181 LPSETSTSTAAAGDHQPETTA-GGGDDPTDAPPPSTTAASTTV 219
             S ++T+T   GD+QPETTA GGGDDP  APPPSTTAAST+V
Sbjct: 181 -TSTSTTATTTTGDNQPETTAGGGGDDPAVAPPPSTTAASTSV 220

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BLAST of HG10021794 vs. NCBI nr
Match: KAA0060022.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucumis melo var. makuwa])

HSP 1 Score: 353.6 bits (906), Expect = 1.2e-93
Identity = 189/223 (84.75%), Postives = 201/223 (90.13%), Query Frame = 0


Query: 1   MDSVSEAGGGGAAEGTAEGSSS--GGGSSAAA--APPSRYESQKRRDWNTFLQYLKNHKP 60
           MDSVSE+GGGGA+E T EG SS  G G++AAA  APPSRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSVSESGGGGASESTGEGCSSATGTGTAAAAGVAPPSRYESQKRRDWNTFLQYLKNHKP 60

Query: 61  PLCLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120
           PLCLARCSGAHVIEFLKYLDQFGKTKVH S CPYFGHPNPPAPCPCPLKQAWGSLDALIG
Sbjct: 61  PLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSASAPPPDPQ 180
           RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP+ +APPP+  
Sbjct: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPAPTAPPPE-- 180

Query: 181 LPSETSTSTAAAGDHQPETTA-GGGDDPTDAPPPSTTAASTTV 219
             S ++T+T   GD+QPETTA GGGDDP  APPPSTTAAST+V
Sbjct: 181 -TSTSTTATTTTGDNQPETTAGGGGDDPAVAPPPSTTAASTSV 220

[Close]

BLAST of HG10021794 vs. NCBI nr
Match: XP_011648517.2 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 [Cucumis sativus] >KAE8653290.1 hypothetical protein Csa_023261 [Cucumis sativus])

HSP 1 Score: 351.3 bits (900), Expect = 6.1e-93
Identity = 192/227 (84.58%), Postives = 198/227 (87.22%), Query Frame = 0


Query: 1   MDSVSEA-GGGGAAEGTAEGSSS----GGGSSAAAAPPSRYESQKRRDWNTFLQYLKNHK 60
           MDSVSE+ GGGGA+E TAEG SS    GGG  AA APPSRYESQKRRDWNTFLQYLKNHK
Sbjct: 1   MDSVSESGGGGGASESTAEGCSSATGGGGGGGAAVAPPSRYESQKRRDWNTFLQYLKNHK 60

Query: 61  PPLCLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALI 120
           PPLCLARCSGAHVIEFLKYLDQFGKTKVH S CPYFGHPNPPAPCPCPLKQAWGSLDALI
Sbjct: 61  PPLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALI 120

Query: 121 GRLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSASAPPPDP 180
           GRLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP+ +APP   
Sbjct: 121 GRLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPAPTAPP--- 180

Query: 181 QLPSETSTS-TAAAGDHQPETTA---GGGDDPTDAPPPSTTAASTTV 219
             P+ETSTS T    D+QPETTA   GGGDDP   PPPSTTAASTTV
Sbjct: 181 --PAETSTSATTTPADNQPETTAGGGGGGDDPALPPPPSTTAASTTV 222

[Close]

BLAST of HG10021794 vs. NCBI nr
Match: XP_022998564.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita maxima])

HSP 1 Score: 338.6 bits (867), Expect = 4.1e-89
Identity = 181/220 (82.27%), Postives = 191/220 (86.82%), Query Frame = 0


Query: 1   MDSVSEAGGGGAAEGTAEGSSSGGGSSAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLCL 60
           MDSV+E+GGGG++E T EGSS+GG +  AAAPPSRYESQKRRDWNTFLQYLKNHKPPL L
Sbjct: 1   MDSVTESGGGGSSEPTGEGSSAGGSAPLAAAPPSRYESQKRRDWNTFLQYLKNHKPPLSL 60

Query: 61  ARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRA 120
           ARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRA
Sbjct: 61  ARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRA 120

Query: 121 AYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR--PSASAPPPDPQLP 180
           AYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR   + S PPP     
Sbjct: 121 AYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRAATNVSVPPPTDVSL 180

Query: 181 SETSTSTAAAGDHQPETTAGGGDDPTDAPPPSTTAASTTV 219
           + +S+S    GD QPETTA G  D T   PPSTTAASTTV
Sbjct: 181 AGSSSSATVGGDIQPETTASG--DQTGDAPPSTTAASTTV 218

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BLAST of HG10021794 vs. ExPASy Swiss-Prot
Match: A2Y3I2 (Protein G1-like9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19565 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.8e-68
Identity = 140/204 (68.63%), Postives = 156/204 (76.47%), Query Frame = 0


Query: 29  AAAPPSRYESQKRRDWNTFLQYLKNHKPPLCLARCSGAHVIEFLKYLDQFGKTKVHGSGC 88
           AAA  SRYESQKRRDWNTFLQYL+NHKPPL L RCSGAHVIEFLKYLDQFGKTKVH  GC
Sbjct: 61  AAAGLSRYESQKRRDWNTFLQYLRNHKPPLTLPRCSGAHVIEFLKYLDQFGKTKVHADGC 120

Query: 89  PYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGRPESNPFAARAVRIYLREVRE 148
            YFG PNPPAPC CPL+QAWGSLDALIGRLRAAYEE+GGRPESNPFAARAVRIYLREVRE
Sbjct: 121 AYFGEPNPPAPCACPLRQAWGSLDALIGRLRAAYEESGGRPESNPFAARAVRIYLREVRE 180

Query: 149 AQAKARGIPYEKKKRKRPSAS--------APPPDPQLPSETSTSTAAAG---DHQPETTA 208
           AQAKARGIPYEKK+++  +A+        APPP    P + + ++  AG   D    T +
Sbjct: 181 AQAKARGIPYEKKRKRGAAAAAAAPPVVVAPPPVVTAPDDATGTSGGAGEDDDDDEATHS 240

Query: 209 GGGDDPTDA----PPPSTTAASTT 218
           G   D T A     PP+T+  +TT
Sbjct: 241 GEQQDTTPAASPTTPPATSVGTTT 264

[Close]

BLAST of HG10021794 vs. ExPASy Swiss-Prot
Match: Q5W659 (Protein G1-like9 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L9 PE=1 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.8e-68
Identity = 140/204 (68.63%), Postives = 156/204 (76.47%), Query Frame = 0


Query: 29  AAAPPSRYESQKRRDWNTFLQYLKNHKPPLCLARCSGAHVIEFLKYLDQFGKTKVHGSGC 88
           AAA  SRYESQKRRDWNTFLQYL+NHKPPL L RCSGAHVIEFLKYLDQFGKTKVH  GC
Sbjct: 61  AAAGLSRYESQKRRDWNTFLQYLRNHKPPLTLPRCSGAHVIEFLKYLDQFGKTKVHADGC 120

Query: 89  PYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGRPESNPFAARAVRIYLREVRE 148
            YFG PNPPAPC CPL+QAWGSLDALIGRLRAAYEE+GGRPESNPFAARAVRIYLREVRE
Sbjct: 121 AYFGEPNPPAPCACPLRQAWGSLDALIGRLRAAYEESGGRPESNPFAARAVRIYLREVRE 180

Query: 149 AQAKARGIPYEKKKRKRPSAS--------APPPDPQLPSETSTSTAAAG---DHQPETTA 208
           AQAKARGIPYEKK+++  +A+        APPP    P + + ++  AG   D    T +
Sbjct: 181 AQAKARGIPYEKKRKRGAAAAAAAPPVVVAPPPVVTAPDDATGTSGGAGEDDDDDEATHS 240

Query: 209 GGGDDPTDA----PPPSTTAASTT 218
           G   D T A     PP+T+  +TT
Sbjct: 241 GEQQDTTPAASPTTPPATSVGTTT 264

[Close]

BLAST of HG10021794 vs. ExPASy Swiss-Prot
Match: A2Y5N0 (Protein G1-like8 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_20303 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.1e-68
Identity = 143/218 (65.60%), Postives = 158/218 (72.48%), Query Frame = 0


Query: 8   GGGGAAEGTAEGSSSGGGSSAAAAPP--------SRYESQKRRDWNTFLQYLKNHKPPLC 67
           GGGG A+  A+          A APP        SRYESQKRRDWNTFLQYL+NH+PPL 
Sbjct: 3   GGGGGADAQAQ------AQPVAQAPPAMQPMQQLSRYESQKRRDWNTFLQYLRNHRPPLT 62

Query: 68  LARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLR 127
           LARCSGAHVIEFLKYLDQFGKTKVH SGC Y+G P+PPAPCPCPL+QAWGSLDALIGRLR
Sbjct: 63  LARCSGAHVIEFLKYLDQFGKTKVHASGCAYYGQPSPPAPCPCPLRQAWGSLDALIGRLR 122

Query: 128 AAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSASAPPPDPQLPS 187
           AAYEE+G  PESNPFAARAVRIYLREVR+AQAKARGIPYEKKKRKR     PPP P LP 
Sbjct: 123 AAYEESGHAPESNPFAARAVRIYLREVRDAQAKARGIPYEKKKRKRTQQQQPPPQPPLPP 182

Query: 188 ETSTSTAAAGDHQPETTAGGGDDPTDAPPPSTTAASTT 218
           +     AAAG+    ++A       +    S   A+ T
Sbjct: 183 QHQPG-AAAGEASSSSSAAAAAVAAEGSGSSAATAAAT 213

[Close]

BLAST of HG10021794 vs. ExPASy Swiss-Prot
Match: B8AH02 (Protein G1-like3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_05696 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 4.1e-68
Identity = 134/207 (64.73%), Postives = 153/207 (73.91%), Query Frame = 0


Query: 8   GGGGAAEG-----TAEGSSSGGGSSAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLCLAR 67
           GGGG  +G     +A  SSS GG +A    PSRYE+QKRRDWNTF QYL+NH+PPL LA+
Sbjct: 41  GGGGGGDGAGGSSSAGASSSAGGGAATPQTPSRYEAQKRRDWNTFGQYLRNHRPPLGLAQ 100

Query: 68  CSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAY 127
           CSGAHV+EFL+YLDQFGKTKVH + CP+FGHPNPPAPCPCPL+QAWGSLDAL+GRLRAA+
Sbjct: 101 CSGAHVLEFLRYLDQFGKTKVHTAACPFFGHPNPPAPCPCPLRQAWGSLDALVGRLRAAF 160

Query: 128 EENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSASAPPPDPQLPSETS 187
           EENGGRPESNPFA RAVR+YLREVRE QA+ARG+ YEKKKRK+P                
Sbjct: 161 EENGGRPESNPFAVRAVRLYLREVREHQARARGVSYEKKKRKKP---------------- 220

Query: 188 TSTAAAGDHQPETTAGGGDDPTDAPPP 210
                    QP  T+GGG  P   PPP
Sbjct: 221 ---------QPADTSGGGGHPHPPPPP 222

[Close]

BLAST of HG10021794 vs. ExPASy Swiss-Prot
Match: Q0DZF3 (Protein G1-like3 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L3 PE=1 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 4.1e-68
Identity = 134/207 (64.73%), Postives = 153/207 (73.91%), Query Frame = 0


Query: 8   GGGGAAEG-----TAEGSSSGGGSSAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLCLAR 67
           GGGG  +G     +A  SSS GG +A    PSRYE+QKRRDWNTF QYL+NH+PPL LA+
Sbjct: 41  GGGGGGDGAGGSSSAGASSSAGGGAATPQTPSRYEAQKRRDWNTFGQYLRNHRPPLGLAQ 100

Query: 68  CSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAY 127
           CSGAHV+EFL+YLDQFGKTKVH + CP+FGHPNPPAPCPCPL+QAWGSLDAL+GRLRAA+
Sbjct: 101 CSGAHVLEFLRYLDQFGKTKVHTAACPFFGHPNPPAPCPCPLRQAWGSLDALVGRLRAAF 160

Query: 128 EENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSASAPPPDPQLPSETS 187
           EENGGRPESNPFA RAVR+YLREVRE QA+ARG+ YEKKKRK+P                
Sbjct: 161 EENGGRPESNPFAVRAVRLYLREVREHQARARGVSYEKKKRKKP---------------- 220

Query: 188 TSTAAAGDHQPETTAGGGDDPTDAPPP 210
                    QP  T+GGG  P   PPP
Sbjct: 221 ---------QPADTSGGGGHPHPPPPP 222

[Close]

BLAST of HG10021794 vs. ExPASy TrEMBL
Match: A0A5A7UVV8 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold340G00670 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.9e-94
Identity = 189/223 (84.75%), Postives = 201/223 (90.13%), Query Frame = 0


Query: 1   MDSVSEAGGGGAAEGTAEGSSS--GGGSSAAA--APPSRYESQKRRDWNTFLQYLKNHKP 60
           MDSVSE+GGGGA+E T EG SS  G G++AAA  APPSRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSVSESGGGGASESTGEGCSSATGTGTAAAAGVAPPSRYESQKRRDWNTFLQYLKNHKP 60

Query: 61  PLCLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120
           PLCLARCSGAHVIEFLKYLDQFGKTKVH S CPYFGHPNPPAPCPCPLKQAWGSLDALIG
Sbjct: 61  PLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSASAPPPDPQ 180
           RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP+ +APPP+  
Sbjct: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPAPTAPPPE-- 180

Query: 181 LPSETSTSTAAAGDHQPETTA-GGGDDPTDAPPPSTTAASTTV 219
             S ++T+T   GD+QPETTA GGGDDP  APPPSTTAAST+V
Sbjct: 181 -TSTSTTATTTTGDNQPETTAGGGGDDPAVAPPPSTTAASTSV 220

[Close]

BLAST of HG10021794 vs. ExPASy TrEMBL
Match: A0A1S3C5Y5 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucumis melo OX=3656 GN=LOC103497051 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.9e-94
Identity = 189/223 (84.75%), Postives = 201/223 (90.13%), Query Frame = 0


Query: 1   MDSVSEAGGGGAAEGTAEGSSS--GGGSSAAA--APPSRYESQKRRDWNTFLQYLKNHKP 60
           MDSVSE+GGGGA+E T EG SS  G G++AAA  APPSRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSVSESGGGGASESTGEGCSSATGTGTAAAAGVAPPSRYESQKRRDWNTFLQYLKNHKP 60

Query: 61  PLCLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120
           PLCLARCSGAHVIEFLKYLDQFGKTKVH S CPYFGHPNPPAPCPCPLKQAWGSLDALIG
Sbjct: 61  PLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSASAPPPDPQ 180
           RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP+ +APPP+  
Sbjct: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPAPTAPPPE-- 180

Query: 181 LPSETSTSTAAAGDHQPETTA-GGGDDPTDAPPPSTTAASTTV 219
             S ++T+T   GD+QPETTA GGGDDP  APPPSTTAAST+V
Sbjct: 181 -TSTSTTATTTTGDNQPETTAGGGGDDPAVAPPPSTTAASTSV 220

[Close]

BLAST of HG10021794 vs. ExPASy TrEMBL
Match: A0A6J1KEN4 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita maxima OX=3661 GN=LOC111493161 PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 2.0e-89
Identity = 181/220 (82.27%), Postives = 191/220 (86.82%), Query Frame = 0


Query: 1   MDSVSEAGGGGAAEGTAEGSSSGGGSSAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLCL 60
           MDSV+E+GGGG++E T EGSS+GG +  AAAPPSRYESQKRRDWNTFLQYLKNHKPPL L
Sbjct: 1   MDSVTESGGGGSSEPTGEGSSAGGSAPLAAAPPSRYESQKRRDWNTFLQYLKNHKPPLSL 60

Query: 61  ARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRA 120
           ARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRA
Sbjct: 61  ARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRA 120

Query: 121 AYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR--PSASAPPPDPQLP 180
           AYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR   + S PPP     
Sbjct: 121 AYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRAATNVSVPPPTDVSL 180

Query: 181 SETSTSTAAAGDHQPETTAGGGDDPTDAPPPSTTAASTTV 219
           + +S+S    GD QPETTA G  D T   PPSTTAASTTV
Sbjct: 181 AGSSSSATVGGDIQPETTASG--DQTGDAPPSTTAASTTV 218

[Close]

BLAST of HG10021794 vs. ExPASy TrEMBL
Match: A0A6J1GCE7 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita moschata OX=3662 GN=LOC111452872 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.8e-88
Identity = 182/224 (81.25%), Postives = 193/224 (86.16%), Query Frame = 0


Query: 1   MDSVSEAGGGGAAEGTAEGSSSGG----GSSAAAAPPSRYESQKRRDWNTFLQYLKNHKP 60
           MDSV+E+GGGG++E T EGSS+GG     ++AAAAPPSRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSVTESGGGGSSEPTGEGSSAGGSAPLAAAAAAAPPSRYESQKRRDWNTFLQYLKNHKP 60

Query: 61  PLCLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120
           PL LARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG
Sbjct: 61  PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSA--SAPPPD 180
           RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR +A  S PPP 
Sbjct: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRAAANVSVPPPT 180

Query: 181 PQLPSETSTSTAAAGDHQPETTAGGGDDPTDAPPPSTTAASTTV 219
               + +S+S     D QPETTA G  D T   PPSTTAASTTV
Sbjct: 181 DVSLAGSSSSATVGADIQPETTAAG--DQTGDAPPSTTAASTTV 222

[Close]

BLAST of HG10021794 vs. ExPASy TrEMBL
Match: A0A6J1HK49 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita moschata OX=3662 GN=LOC111464848 PE=3 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 7.5e-81
Identity = 175/228 (76.75%), Postives = 184/228 (80.70%), Query Frame = 0


Query: 1   MDSVSEAGGGGAAEGTAEGSSSGGGSSA---AAAPPSRYESQKRRDWNTFLQYLKNHKPP 60
           MD VS+ GG     G +EGSS+G  ++A   A AP SRYESQKRRDWNTFLQYLKNHKPP
Sbjct: 10  MDPVSKPGG-----GPSEGSSAGASAAATTPAPAPASRYESQKRRDWNTFLQYLKNHKPP 69

Query: 61  LCLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGR 120
           L LARCSGAHVIEFLKYLDQFGKTKVH SGCPYFGHPNPPAPCPCPLKQAWGSLDALIGR
Sbjct: 70  LSLARCSGAHVIEFLKYLDQFGKTKVHASGCPYFGHPNPPAPCPCPLKQAWGSLDALIGR 129

Query: 121 LRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR----PSASAPPP 180
           LRAAYEENGGRPESNPFAARAVRI+LREVREAQAKARGIPYEKKKRKR     SASAP P
Sbjct: 130 LRAAYEENGGRPESNPFAARAVRIFLREVREAQAKARGIPYEKKKRKRHAASASASAPAP 189

Query: 181 DP---QLPSETSTSTAAAGDHQPETTAGGGDDPTDAPPPSTTAASTTV 219
                 +P ET     A  DHQPET+     DP+ APPPSTTAAST V
Sbjct: 190 TAAILSVPPETHV-VLAGEDHQPETS-----DPSGAPPPSTTAASTAV 226

[Close]

BLAST of HG10021794 vs. TAIR 10
Match: AT1G07090.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 258.8 bits (660), Expect = 3.8e-69
Identity = 134/188 (71.28%), Postives = 144/188 (76.60%), Query Frame = 0


Query: 27  SAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLCLARCSGAHVIEFLKYLDQFGKTKVHGS 86
           S+  A PSRYESQKRRDWNTFLQYLKNHKPPL L+RCSGAHVIEFLKYLDQFGKTKVH +
Sbjct: 23  SSPPATPSRYESQKRRDWNTFLQYLKNHKPPLALSRCSGAHVIEFLKYLDQFGKTKVHVA 82

Query: 87  GCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGRPESNPFAARAVRIYLREV 146
            CPYFGH  PP+PC CPLKQAWGSLDALIGRLRAAYEENGGRP+SNPFAARAVRIYLREV
Sbjct: 83  ACPYFGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEENGGRPDSNPFAARAVRIYLREV 142

Query: 147 REAQAKARGIPYEKKKRKRPSASAPPPDPQLPSETSTSTAAAGDHQPETTAGGGDDPTDA 206
           RE+QAKARGIPYEKKKRKRP           P+ T+     A   Q +       DP + 
Sbjct: 143 RESQAKARGIPYEKKKRKRP-----------PTVTTVRVDVASSRQSD------GDPCNV 193

Query: 207 PPPSTTAA 215
             PS   A
Sbjct: 203 GAPSVAEA 193

[Close]

BLAST of HG10021794 vs. TAIR 10
Match: AT5G58500.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 246.5 bits (628), Expect = 2.0e-65
Identity = 124/183 (67.76%), Postives = 145/183 (79.23%), Query Frame = 0


Query: 18  EGSSSGGGSSAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLCLARCSGAHVIEFLKYLDQ 77
           EG ++   ++++++ PSRYESQKRRDWNTFLQYL+NHKPPL L+RCSGAHV+EFLKYLDQ
Sbjct: 2   EGETAAKAAASSSSSPSRYESQKRRDWNTFLQYLRNHKPPLNLSRCSGAHVLEFLKYLDQ 61

Query: 78  FGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEE-NGGRPESNPFAA 137
           FGKTKVH + CP+FG PNPP+ C CPLKQAWGSLDALIGRLRAA+EE  GG PESNPFAA
Sbjct: 62  FGKTKVHATACPFFGQPNPPSQCTCPLKQAWGSLDALIGRLRAAFEEIGGGLPESNPFAA 121

Query: 138 RAVRIYLREVREAQAKARGIPYEKKKRKRPSASAPPPDPQLPSETSTSTAAAGDHQPETT 197
           +AVRIYL+EVR+ QAKARGIPY+KKKRKRP              T T+T  AGD      
Sbjct: 122 KAVRIYLKEVRQTQAKARGIPYDKKKRKRP-------------HTDTATPIAGDGDDAEG 171

Query: 198 AGG 200
           +GG
Sbjct: 182 SGG 171

[Close]

BLAST of HG10021794 vs. TAIR 10
Match: AT3G23290.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 246.1 bits (627), Expect = 2.6e-65
Identity = 120/168 (71.43%), Postives = 135/168 (80.36%), Query Frame = 0


Query: 12  AAEGTAEGSSSGGGSSAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLCLARCSGAHVIEF 71
           A   T   SSS     +     SRYE+QKRRDWNTF QYL+NH+PPL L+RCSGAHV+EF
Sbjct: 25  ATTTTTSSSSSSSSGGSGTNQLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEF 84

Query: 72  LKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGRPES 131
           L+YLDQFGKTKVH   CP+FGHPNPPAPC CPL+QAWGSLDALIGRLRAA+EENGG PE+
Sbjct: 85  LRYLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPET 144

Query: 132 NPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSASAPPPDPQLPS 180
           NPF ARAVR+YLREVR++QAKARGI YEKKKRKRP    PP  P + S
Sbjct: 145 NPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPPPPLPPAQPAISS 192

[Close]

BLAST of HG10021794 vs. TAIR 10
Match: AT2G31160.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 242.7 bits (618), Expect = 2.8e-64
Identity = 124/190 (65.26%), Postives = 149/190 (78.42%), Query Frame = 0


Query: 3   SVSEAGGGGAAEGTAEGSSSGGGSSAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLCLAR 62
           SV+ A GG A +  +  SS    S       SRYE+QKRRDWNTF QYL+NH+PPL L+R
Sbjct: 29  SVTGATGGEATQPLSSSSSPSANS-------SRYENQKRRDWNTFGQYLRNHRPPLSLSR 88

Query: 63  CSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAY 122
           CSGAHV+EFL+YLDQFGKTKVH + C ++GHPNPPAPCPCPL+QAWGSLDALIGRLRAA+
Sbjct: 89  CSGAHVLEFLRYLDQFGKTKVHTNICHFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAF 148

Query: 123 EENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSASAPPPDPQLPSETS 182
           EENGG+PE+NPF ARAVR+YLREVR+ Q+KARG+ YEKKKRKRP          LPS ++
Sbjct: 149 EENGGKPETNPFGARAVRLYLREVRDMQSKARGVSYEKKKRKRP----------LPSSST 201

Query: 183 TSTAAAGDHQ 193
           +S++A   HQ
Sbjct: 209 SSSSAVASHQ 201

[Close]

BLAST of HG10021794 vs. TAIR 10
Match: AT5G28490.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 231.9 bits (590), Expect = 5.0e-61
Identity = 112/154 (72.73%), Postives = 126/154 (81.82%), Query Frame = 0


Query: 26  SSAAAAPP--SRYESQKRRDWNTFLQYLKNHKPPLCLARCSGAHVIEFLKYLDQFGKTKV 85
           SS    PP  SRYE+QKRRDWNTF QYL+NH+PPL L  CSGAHV+EFL+YLDQFGKTKV
Sbjct: 14  SSTQLTPPSSSRYENQKRRDWNTFCQYLRNHRPPLSLPSCSGAHVLEFLRYLDQFGKTKV 73

Query: 86  HGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGRPESNPFAARAVRIYL 145
           H   C +FG PNPPAPCPCPL+QAWGSLDALIGRLRAAYEENGG PE+NPF +RAVR++L
Sbjct: 74  HHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGPPEANPFGSRAVRLFL 133

Query: 146 REVREAQAKARGIPYEKKKRKRPSASAPPPDPQL 178
           REVR+ QAKARG+ YE KKRKR +   P   P L
Sbjct: 134 REVRDFQAKARGVSYE-KKRKRVNRQKPQTQPPL 166

The following BLAST results are available for this feature:

BLAST of HG10021794 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893975.1	2.5e-102	91.52	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Benincasa hispida]	[more]
XP_008457336.1	1.2e-93	84.75	PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucumis melo]	[more]
KAA0060022.1	1.2e-93	84.75	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucumis melo var. makuwa]	[more]
XP_011648517.2	6.1e-93	84.58	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 [Cucumis sativus] >KAE8653290.1 hypot...	[more]
XP_022998564.1	4.1e-89	82.27	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita maxima]	[more]

BLAST of HG10021794 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2Y3I2	1.8e-68	68.63	Protein G1-like9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19565 PE=3 SV=1	[more]
Q5W659	1.8e-68	68.63	Protein G1-like9 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L9 PE=1 SV=1	[more]
A2Y5N0	3.1e-68	65.60	Protein G1-like8 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_20303 PE=3 SV=1	[more]
B8AH02	4.1e-68	64.73	Protein G1-like3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_05696 PE=3 SV=1	[more]
Q0DZF3	4.1e-68	64.73	Protein G1-like3 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L3 PE=1 SV=1	[more]

BLAST of HG10021794 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UVV8	5.9e-94	84.75	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3C5Y5	5.9e-94	84.75	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1KEN4	2.0e-89	82.27	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GCE7	2.8e-88	81.25	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HK49	7.5e-81	76.75	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of HG10021794 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07090.1	3.8e-69	71.28	Protein of unknown function (DUF640)	[more]
AT5G58500.1	2.0e-65	67.76	Protein of unknown function (DUF640)	[more]
AT3G23290.2	2.6e-65	71.43	Protein of unknown function (DUF640)	[more]
AT2G31160.1	2.8e-64	65.26	Protein of unknown function (DUF640)	[more]
AT5G28490.1	5.0e-61	72.73	Protein of unknown function (DUF640)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006936	ALOG domain	PFAM	PF04852	DUF640	coord: 29..148 e-value: 2.6E-65 score: 218.3
IPR006936	ALOG domain	PROSITE	PS51697	ALOG	coord: 35..162 score: 83.515839
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	PANTHER	PTHR31165:SF59	PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6	coord: 9..200
IPR040222	ALOG family	PANTHER	PTHR31165	PROTEIN G1-LIKE2	coord: 9..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021794.1	HG10021794.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0005634	nucleus