HG10021766 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATATGGGAAGAACTTCAGGAGATTTGGGAGGAAAATCAAGGAAGATGAGACTGAAGAAGCTGAGAACAAGAGACGACATGTCGATTGAGGAAGAAGATTACCACACAGGAGTATCAGCATCAGTGCCATTCAAGTGGGAGTCAGAGCCAGGAACTCCCAAAGCTAATTTCCTTGAAAATGGGGAAATCTTTTCTCCTTTAACTCCTCCACCTTCCTATTTCTCCAATGATACTAATTCCCCTCTCACCCATATTTCTTCTAAGCCTATTTCTTCTAAGACCAATTTCCTCAACTCTGTCTTCAGGAAGCTTTCTGTCAAGGCCACTTTACAGCCTTCCTCCCCCGGTTCTTTCTCGTCCTCCTCGTCTTCGTCTACGAGTTCTAGCAGGGAAAGACGGAGACCGGGAAGCCCTAGGAGATTGTCGTTTGATTCGAGGGTGGACGATGACGATAACGACGACGACAATGTAGAATCGCCTGTTTCTACTTTGTTCTTTGGACGTGGAAGTGATAAAGGATGTTATCCAAAATTGGTCAAGGTATTCACCAGAGATTCTAAATGA ATGAATATGGGAAGAACTTCAGGAGATTTGGGAGGAAAATCAAGGAAGATGAGACTGAAGAAGCTGAGAACAAGAGACGACATGTCGATTGAGGAAGAAGATTACCACACAGGAGTATCAGCATCAGTGCCATTCAAGTGGGAGTCAGAGCCAGGAACTCCCAAAGCTAATTTCCTTGAAAATGGGGAAATCTTTTCTCCTTTAACTCCTCCACCTTCCTATTTCTCCAATGATACTAATTCCCCTCTCACCCATATTTCTTCTAAGCCTATTTCTTCTAAGACCAATTTCCTCAACTCTGTCTTCAGGAAGCTTTCTGTCAAGGCCACTTTACAGCCTTCCTCCCCCGGTTCTTTCTCGTCCTCCTCGTCTTCGTCTACGAGTTCTAGCAGGGAAAGACGGAGACCGGGAAGCCCTAGGAGATTGTCGTTTGATTCGAGGGTGGACGATGACGATAACGACGACGACAATGTAGAATCGCCTGTTTCTACTTTGTTCTTTGGACGTGGAAGTGATAAAGGATGTTATCCAAAATTGGTCAAGGTATTCACCAGAGATTCTAAATGA ATGAATATGGGAAGAACTTCAGGAGATTTGGGAGGAAAATCAAGGAAGATGAGACTGAAGAAGCTGAGAACAAGAGACGACATGTCGATTGAGGAAGAAGATTACCACACAGGAGTATCAGCATCAGTGCCATTCAAGTGGGAGTCAGAGCCAGGAACTCCCAAAGCTAATTTCCTTGAAAATGGGGAAATCTTTTCTCCTTTAACTCCTCCACCTTCCTATTTCTCCAATGATACTAATTCCCCTCTCACCCATATTTCTTCTAAGCCTATTTCTTCTAAGACCAATTTCCTCAACTCTGTCTTCAGGAAGCTTTCTGTCAAGGCCACTTTACAGCCTTCCTCCCCCGGTTCTTTCTCGTCCTCCTCGTCTTCGTCTACGAGTTCTAGCAGGGAAAGACGGAGACCGGGAAGCCCTAGGAGATTGTCGTTTGATTCGAGGGTGGACGATGACGATAACGACGACGACAATGTAGAATCGCCTGTTTCTACTTTGTTCTTTGGACGTGGAAGTGATAAAGGATGTTATCCAAAATTGGTCAAGGTATTCACCAGAGATTCTAAATGA MNMGRTSGDLGGKSRKMRLKKLRTRDDMSIEEEDYHTGVSASVPFKWESEPGTPKANFLENGEIFSPLTPPPSYFSNDTNSPLTHISSKPISSKTNFLNSVFRKLSVKATLQPSSPGSFSSSSSSSTSSSRERRRPGSPRRLSFDSRVDDDDNDDDNVESPVSTLFFGRGSDKGCYPKLVKVFTRDSK Homology
BLAST of HG10021766 vs. NCBI nr
Match: XP_038894794.1 (uncharacterized protein LOC120083212 [Benincasa hispida] >XP_038894795.1 uncharacterized protein LOC120083212 [Benincasa hispida]) HSP 1 Score: 307.0 bits (785), Expect = 1.1e-79 Identity = 170/193 (88.08%), Postives = 173/193 (89.64%), Query Frame = 0
BLAST of HG10021766 vs. NCBI nr
Match: XP_008457312.1 (PREDICTED: uncharacterized protein At4g00950 [Cucumis melo] >KAA0060003.1 NADPH oxidase activator [Cucumis melo var. makuwa] >TYJ97261.1 NADPH oxidase activator [Cucumis melo var. makuwa]) HSP 1 Score: 247.3 bits (630), Expect = 1.1e-61 Identity = 145/202 (71.78%), Postives = 161/202 (79.70%), Query Frame = 0
BLAST of HG10021766 vs. NCBI nr
Match: XP_022970378.1 (uncharacterized protein LOC111469381 [Cucurbita maxima]) HSP 1 Score: 241.5 bits (615), Expect = 5.8e-60 Identity = 133/172 (77.33%), Postives = 148/172 (86.05%), Query Frame = 0
BLAST of HG10021766 vs. NCBI nr
Match: XP_023519368.1 (uncharacterized protein LOC111782803 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 241.1 bits (614), Expect = 7.6e-60 Identity = 133/172 (77.33%), Postives = 146/172 (84.88%), Query Frame = 0
BLAST of HG10021766 vs. NCBI nr
Match: KAG6583323.1 (hypothetical protein SDJN03_19255, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 236.1 bits (601), Expect = 2.4e-58 Identity = 131/172 (76.16%), Postives = 145/172 (84.30%), Query Frame = 0
BLAST of HG10021766 vs. ExPASy TrEMBL
Match: A0A5D3BF70 (NADPH oxidase activator OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00550 PE=4 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 5.1e-62 Identity = 145/202 (71.78%), Postives = 161/202 (79.70%), Query Frame = 0
BLAST of HG10021766 vs. ExPASy TrEMBL
Match: A0A1S3C5A7 (uncharacterized protein At4g00950 OS=Cucumis melo OX=3656 GN=LOC103497034 PE=4 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 5.1e-62 Identity = 145/202 (71.78%), Postives = 161/202 (79.70%), Query Frame = 0
BLAST of HG10021766 vs. ExPASy TrEMBL
Match: A0A6J1I3P2 (uncharacterized protein LOC111469381 OS=Cucurbita maxima OX=3661 GN=LOC111469381 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 2.8e-60 Identity = 133/172 (77.33%), Postives = 148/172 (86.05%), Query Frame = 0
BLAST of HG10021766 vs. ExPASy TrEMBL
Match: A0A0A0LYC9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533640 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 1.2e-58 Identity = 142/202 (70.30%), Postives = 161/202 (79.70%), Query Frame = 0
BLAST of HG10021766 vs. ExPASy TrEMBL
Match: A0A6J1HLP7 (uncharacterized protein LOC111464733 OS=Cucurbita moschata OX=3662 GN=LOC111464733 PE=4 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 5.9e-58 Identity = 130/172 (75.58%), Postives = 143/172 (83.14%), Query Frame = 0
BLAST of HG10021766 vs. TAIR 10
Match: AT1G06930.1 (unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi - 125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800 (source: NCBI BLink). ) HSP 1 Score: 75.1 bits (183), Expect = 6.7e-14 Identity = 71/170 (41.76%), Postives = 87/170 (51.18%), Query Frame = 0
BLAST of HG10021766 vs. TAIR 10
Match: AT3G56260.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40475.1). ) HSP 1 Score: 64.3 bits (155), Expect = 1.2e-10 Identity = 57/163 (34.97%), Postives = 80/163 (49.08%), Query Frame = 0
BLAST of HG10021766 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). ) HSP 1 Score: 59.7 bits (143), Expect = 2.9e-09 Identity = 52/137 (37.96%), Postives = 72/137 (52.55%), Query Frame = 0
BLAST of HG10021766 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.9 bits (115), Expect = 5.2e-06 Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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