HG10021764 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021764
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	PseudoU_synth_1 domain-containing protein
Location	Chr05: 16303772 .. 16306661 (-)
RNA-Seq Expression	HG10021764
Synteny	HG10021764

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATCCCTGAAAGTGCTTGGATGGGCGACCCTTGTGGTATTTCGCTTGCTAATTACATCAACTTTTATCTTCCTGATAATATCAAGGTTTTTGGCATTGTACCTTCACAGAGGTGAGTGTTCGAGTTTTTTTCATTGGTGCTTTTAAGTGAGTAAATGAAGTTTTAGCATTAGCAGCATGATACACTTTGACGTATTTACTACAAAGTGGTAACATTACATTAATTTTGTCACTTGTCAAGGAGCTTTGATCCTAGAAAGGAGTGTGATGTTCGGAAGTATTCTTATCTCCTCCCCGCTAAGCTTATTGGAATTGAAAGTAAACTTAAAACTACTGAAGTTGATTGCCACATCTCAGACTTTAAAGATATATTAAATTCCTTTCAGGTAGGAAATTATGTCCTTCATTTAAATACATGTAGATCAGGTTTCCCCTCCCTTCGCTGCAAGAAACATGATTTGGTTAGTTTTGATATAGTATAGAACTGTTATTTGGGAAGAGAATTGTATGGCGTTGAAGAACAAAGGTGGATTCTTTTTGGATACAGGGGGAGCACCCTTTTCATAACTATACAATACGTTCCAAGTATAGAACAAAAGTTCGAGCCAAGCAATCTCCAGGATATGACCATAAGTCAGGCAATGAGGTATCACCCAGTGATGTTTCGAACTCTGAGTTTGAGGAAAGTGATGGAGAAGATGATACTTTTGTTGAAGGAGTCAAGGAACCAGATCAACGTTCTCCAAGCTTAAGTGTTTGTTATGAAAATCCAACTGAAGTATGCAGTAAACTCGGAGATGGATCAGAACTTCCAAAGGGTGTTCGTGCAAGATGGCTTCATGAGCCAGATGAGAAAGATCGTATAGGCGCCTCACACTTCAGAAAGATTCTTTGCTGTTCTTGTGGGAAGCTGGAAACATCTTTTGGATATGATTTCATTGAGATCTCCATCTGGGGAGAATCATTCATGTTGCATCAAGTTAGTCTTTCTCTAACTTTGTTTTTATGGTACATAATTTGTTCTCATCCATTCTCGTTCCAATTTGTAAGTTTATCTGTATTTACTCCATTTATTCTTAATTTCAGTTGGCAGCTCTATTACTTAGTTTTGAGTTTTCTGTTCTAACGCCTCTGGTAGCTTAGATCTTGCATCTGGCCATGTGGGAGCCAAAACTTGGTTTTATAACTGTTCTCTTGTGTCCACTCGACAATTTTTTTGCAGCATTATTTCACTTTTTAAACTCTTTCCCCTCTTCAGAAATCAATGCTTAGTGACCTAGTGGGAGTTTCCTGTGCTAGTAGTCCTTCAAAAAATTCAGAAATAGCTATGGTAATATGAAAATAAATTAAATTCTAAAATATTACGTACGATTAAATAATTTGATGGCCCCTATGCTTTGGTGGACGGAAGATATGAGTTTATATGGGTTCAAGCTTTTTGAGCTTGACTTGTTCAATATCTACCATCATAACCTTCATTTACTTCCAGAGGTTCACAATTTGTAGGATCAGCATGCGCGGTTAGACATATCTACTTTAATTTTTCAGCAGTTACCTATTGCTATTTGAAATCAATTCTTATGAAATTAAATTCCAAGAGACTGAGAACCATTAAATAATTTGATGGTCCCTGTGCATTGGTGGACAAAAAATACGAGTTGATGGGTTCAAGCTTTATGAGCTTGACTTGTTAAATATCTACCACCATAACCCTTCATTTACTCCCTGAGGTTCATAAATTCATGGGATCAGCTTACACCATTAGACATGTCTAGTTTAATTTTTCTGCACTTAACTATTGCTATTTGAAATCATTTCTTATTATCTGGTTTAGAAGGTGGAAATAGAAACTCTATTGAGACAATTTGATTTGTTTGAAAACCTTTCTCATCTTTGTTAGAGACTAAACTATTCCACTGAGGTCAAAGCCTCAGAAAGAAACCCAAAATCTCATGGACAAACGGTACAAAAAGTGAAAATCTTGATTGGATAGATACTAGAAGTTTAAAATTTGTTTGAAAAGCTTTTGCTTCTCTGTTAGATATTAAACCATTCCATTGAGGTCTAAGCCTCAGGAAGAAACCCAGAATCTTATGGACAAATGGTACAAAGAGGCACTAACTGGTGCAGTATGATTATATCTAACCCTCTTGAGGTAGAGGTTCAAATCTACACGAACGAAAAGGCATTATTGCAGCAGATTTGGACAGAGAGAAACTAGAATCTATTAGTAAGTTTAGGAATTGGAAGGAGATATGGGAGGCCCAAGGTGGAAAGGTAGGGGGCTTCCTTTAGGCAGATTTCTCATTTCCATTCTTTTTGTACCTTTTGAGCTCGTAATATTATTTTTTTCCTATTAAAAAATAACATCAATAACATATCCTGTGAACAATGTAGTTGGCTTCACTAGTAACTAATATTTGGTAGTTAATGTTCTAATTTCAAATCGAAAGGGCCATTCTGATGAGACTTTTATTACATCCTGGGCAGATACGGAAAATGATAGGAACAGCTGTTGCAGTGAAGCGGAAACTACTCCCAAGAGATATTATAGCATTGTCATTGACCAAGTTCTCTAGAATAGTTCTACCCATTGCTCCAGCTGAGGTTTTAGTCCTAAGAGGGAACAGTTTTTCGAACAGAAAACGACCAGGAGTTTCAAAGAGGCCAGACTTGTTGACACTGAACGAATCAGACGACATTGTGAAGTCGGTGAACGAATTCTACAAATCAATGATATTACCCGAGGTAACTAACTTCCTGGACGCAGAAAGACCTCCTTGGAAAGAATGGGTGGAGAAATTGGACGAGTACACAGGCATTCCCAATGAACAATTGGATGAAGTTAGAAATGCTTGGAAAGCATGGAACTACAGGGTACATTGA

mRNA sequence

ATGGAAATCCCTGAAAGTGCTTGGATGGGCGACCCTTGTGGTATTTCGCTTGCTAATTACATCAACTTTTATCTTCCTGATAATATCAAGGTTTTTGGCATTGTACCTTCACAGAGAACAAAAGTTCGAGCCAAGCAATCTCCAGGATATGACCATAAGTCAGGCAATGAGGTATCACCCAGTGATGTTTCGAACTCTGAGTTTGAGGAAAGTGATGGAGAAGATGATACTTTTGTTGAAGGAGTCAAGGAACCAGATCAACGTTCTCCAAGCTTAAGTGTTTGTTATGAAAATCCAACTGAAGTATGCAGTAAACTCGGAGATGGATCAGAACTTCCAAAGGGTGTTCGTGCAAGATGGCTTCATGAGCCAGATGAGAAAGATCGTATAGGCGCCTCACACTTCAGAAAGATTCTTTGCTGTTCTTGTGGGAAGCTGGAAACATCTTTTGGATATGATTTCATTGAGATCTCCATCTGGGGAGAATCATTCATGTTGCATCAAATACGGAAAATGATAGGAACAGCTGTTGCAGTGAAGCGGAAACTACTCCCAAGAGATATTATAGCATTGTCATTGACCAAGTTCTCTAGAATAGTTCTACCCATTGCTCCAGCTGAGGTTTTAGTCCTAAGAGGGAACAGTTTTTCGAACAGAAAACGACCAGGAGTTTCAAAGAGGCCAGACTTGTTGACACTGAACGAATCAGACGACATTGTGAAGTCGGTGAACGAATTCTACAAATCAATGATATTACCCGAGGTAACTAACTTCCTGGACGCAGAAAGACCTCCTTGGAAAGAATGGGTGGAGAAATTGGACGAGTACACAGGCATTCCCAATGAACAATTGGATGAAGTTAGAAATGCTTGGAAAGCATGGAACTACAGGGTACATTGA

Coding sequence (CDS)

ATGGAAATCCCTGAAAGTGCTTGGATGGGCGACCCTTGTGGTATTTCGCTTGCTAATTACATCAACTTTTATCTTCCTGATAATATCAAGGTTTTTGGCATTGTACCTTCACAGAGAACAAAAGTTCGAGCCAAGCAATCTCCAGGATATGACCATAAGTCAGGCAATGAGGTATCACCCAGTGATGTTTCGAACTCTGAGTTTGAGGAAAGTGATGGAGAAGATGATACTTTTGTTGAAGGAGTCAAGGAACCAGATCAACGTTCTCCAAGCTTAAGTGTTTGTTATGAAAATCCAACTGAAGTATGCAGTAAACTCGGAGATGGATCAGAACTTCCAAAGGGTGTTCGTGCAAGATGGCTTCATGAGCCAGATGAGAAAGATCGTATAGGCGCCTCACACTTCAGAAAGATTCTTTGCTGTTCTTGTGGGAAGCTGGAAACATCTTTTGGATATGATTTCATTGAGATCTCCATCTGGGGAGAATCATTCATGTTGCATCAAATACGGAAAATGATAGGAACAGCTGTTGCAGTGAAGCGGAAACTACTCCCAAGAGATATTATAGCATTGTCATTGACCAAGTTCTCTAGAATAGTTCTACCCATTGCTCCAGCTGAGGTTTTAGTCCTAAGAGGGAACAGTTTTTCGAACAGAAAACGACCAGGAGTTTCAAAGAGGCCAGACTTGTTGACACTGAACGAATCAGACGACATTGTGAAGTCGGTGAACGAATTCTACAAATCAATGATATTACCCGAGGTAACTAACTTCCTGGACGCAGAAAGACCTCCTTGGAAAGAATGGGTGGAGAAATTGGACGAGTACACAGGCATTCCCAATGAACAATTGGATGAAGTTAGAAATGCTTGGAAAGCATGGAACTACAGGGTACATTGA

Protein sequence

MEIPESAWMGDPCGISLANYINFYLPDNIKVFGIVPSQRTKVRAKQSPGYDHKSGNEVSPSDVSNSEFEESDGEDDTFVEGVKEPDQRSPSLSVCYENPTEVCSKLGDGSELPKGVRARWLHEPDEKDRIGASHFRKILCCSCGKLETSFGYDFIEISIWGESFMLHQIRKMIGTAVAVKRKLLPRDIIALSLTKFSRIVLPIAPAEVLVLRGNSFSNRKRPGVSKRPDLLTLNESDDIVKSVNEFYKSMILPEVTNFLDAERPPWKEWVEKLDEYTGIPNEQLDEVRNAWKAWNYRVH

Homology

[Close]

BLAST of HG10021764 vs. NCBI nr
Match: XP_038894774.1 (putative tRNA pseudouridine synthase isoform X1 [Benincasa hispida])

HSP 1 Score: 548.1 bits (1411), Expect = 4.6e-152
Identity = 278/362 (76.80%), Postives = 289/362 (79.83%), Query Frame = 0


Query: 1   MEIPESAWMGDPCGISLANYINFYLPDNIKVFGIVPSQ---------------------- 60
           MEIPESAWMGDPCGISLANYINFYLPDNIKVFGIVPSQ                      
Sbjct: 148 MEIPESAWMGDPCGISLANYINFYLPDNIKVFGIVPSQKSFDPRKECDVRKYSYVLPAKL 207

Query: 61  -----------------------------------------RTKVRAKQSPGYDHKSGNE 120
                                                    RT++RAK+SPGY    G+E
Sbjct: 208 IGIGNKLKTTEVDYHISDFKDILNSFQGEHPFHNYTIRSKYRTRIRAKRSPGY----GHE 267

Query: 121 VSPSDVSNSEFEESDGEDDTFVEGVKEPDQRSPSLSVCYENPTEVCSKLGDGSELPKGVR 180
           VSPSDVSNSEFEESDGEDDTFVEGVKEPDQ SPSLSVCYENPTEVCSKLGDGSELPK VR
Sbjct: 268 VSPSDVSNSEFEESDGEDDTFVEGVKEPDQGSPSLSVCYENPTEVCSKLGDGSELPKDVR 327

Query: 181 ARWLHEPDEKDRIGASHFRKILCCSCGKLETSFGYDFIEISIWGESFMLHQIRKMIGTAV 240
           ARWLHEPDEKDRIGASHFRKILCCSCGKLETSFGYDF+EISIWGESFMLHQIRKMIGTA+
Sbjct: 328 ARWLHEPDEKDRIGASHFRKILCCSCGKLETSFGYDFVEISIWGESFMLHQIRKMIGTAI 387

Query: 241 AVKRKLLPRDIIALSLTKFSRIVLPIAPAEVLVLRGNSFSNRKRPGVSKRPDLLTLNESD 300
           AVKRKLLPRD+IALSL+KFSRIVLPIAPAEVLVLRGNSFSNRKRPGV KRPDLLTLNESD
Sbjct: 388 AVKRKLLPRDVIALSLSKFSRIVLPIAPAEVLVLRGNSFSNRKRPGVPKRPDLLTLNESD 447

[Close]

BLAST of HG10021764 vs. NCBI nr
Match: XP_038894775.1 (putative tRNA pseudouridine synthase isoform X2 [Benincasa hispida])

HSP 1 Score: 548.1 bits (1411), Expect = 4.6e-152
Identity = 278/362 (76.80%), Postives = 289/362 (79.83%), Query Frame = 0


Query: 1   MEIPESAWMGDPCGISLANYINFYLPDNIKVFGIVPSQ---------------------- 60
           MEIPESAWMGDPCGISLANYINFYLPDNIKVFGIVPSQ                      
Sbjct: 65  MEIPESAWMGDPCGISLANYINFYLPDNIKVFGIVPSQKSFDPRKECDVRKYSYVLPAKL 124

Query: 61  -----------------------------------------RTKVRAKQSPGYDHKSGNE 120
                                                    RT++RAK+SPGY    G+E
Sbjct: 125 IGIGNKLKTTEVDYHISDFKDILNSFQGEHPFHNYTIRSKYRTRIRAKRSPGY----GHE 184

Query: 121 VSPSDVSNSEFEESDGEDDTFVEGVKEPDQRSPSLSVCYENPTEVCSKLGDGSELPKGVR 180
           VSPSDVSNSEFEESDGEDDTFVEGVKEPDQ SPSLSVCYENPTEVCSKLGDGSELPK VR
Sbjct: 185 VSPSDVSNSEFEESDGEDDTFVEGVKEPDQGSPSLSVCYENPTEVCSKLGDGSELPKDVR 244

Query: 181 ARWLHEPDEKDRIGASHFRKILCCSCGKLETSFGYDFIEISIWGESFMLHQIRKMIGTAV 240
           ARWLHEPDEKDRIGASHFRKILCCSCGKLETSFGYDF+EISIWGESFMLHQIRKMIGTA+
Sbjct: 245 ARWLHEPDEKDRIGASHFRKILCCSCGKLETSFGYDFVEISIWGESFMLHQIRKMIGTAI 304

Query: 241 AVKRKLLPRDIIALSLTKFSRIVLPIAPAEVLVLRGNSFSNRKRPGVSKRPDLLTLNESD 300
           AVKRKLLPRD+IALSL+KFSRIVLPIAPAEVLVLRGNSFSNRKRPGV KRPDLLTLNESD
Sbjct: 305 AVKRKLLPRDVIALSLSKFSRIVLPIAPAEVLVLRGNSFSNRKRPGVPKRPDLLTLNESD 364

[Close]

BLAST of HG10021764 vs. NCBI nr
Match: XP_008457308.1 (PREDICTED: putative tRNA pseudouridine synthase [Cucumis melo])

HSP 1 Score: 513.5 bits (1321), Expect = 1.3e-141
Identity = 265/362 (73.20%), Postives = 279/362 (77.07%), Query Frame = 0


Query: 1   MEIPESAWMGDPCGISLANYINFYLPDNIKVFGIVPSQ---------------------- 60
           MEIPESAWMGDPCGISLA+YIN YLPDNIKVFGIVPSQ                      
Sbjct: 148 MEIPESAWMGDPCGISLADYINSYLPDNIKVFGIVPSQRSFDPRKECDVRKYSYLLPAKL 207

Query: 61  -----------------------------------------RTKVRAKQSPGYDHKSGNE 120
                                                    RT++RAKQSPGY  KSGN+
Sbjct: 208 IGIESKLKTTEIDCHISDFKDILNSFEGEHPFHNYTIRSNYRTRIRAKQSPGYALKSGNK 267

Query: 121 VSPSDVSNSEFEESDGEDDTFVEGVKEPDQRSPSLSVCYENPTEVCSKLGDGSELPKGVR 180
           VSP ++SN EFEESD EDDTFVEGVKEPDQ SPSLSVC EN TEVCSKL DGSEL KGVR
Sbjct: 268 VSPGEMSNFEFEESDREDDTFVEGVKEPDQCSPSLSVC-ENLTEVCSKLEDGSELLKGVR 327

Query: 181 ARWLHEPDEKDRIGASHFRKILCCSCGKLETSFGYDFIEISIWGESFMLHQIRKMIGTAV 240
           ARWLHEPDEKDRIGASHFR+ILCCSCGKLETSFGYDFIEISIWGESFMLHQIRKMIGTAV
Sbjct: 328 ARWLHEPDEKDRIGASHFRRILCCSCGKLETSFGYDFIEISIWGESFMLHQIRKMIGTAV 387

Query: 241 AVKRKLLPRDIIALSLTKFSRIVLPIAPAEVLVLRGNSFSNRKRPGVSKRPDLLTLNESD 300
           AVKRKLLPRD+IALSLTKFSRIVLPIAPAEVLVLRGNSFS RKRPGV  RPDL+TLNESD
Sbjct: 388 AVKRKLLPRDVIALSLTKFSRIVLPIAPAEVLVLRGNSFSTRKRPGVPTRPDLVTLNESD 447

[Close]

BLAST of HG10021764 vs. NCBI nr
Match: XP_022970646.1 (putative tRNA pseudouridine synthase [Cucurbita maxima])

HSP 1 Score: 501.1 bits (1289), Expect = 6.5e-138
Identity = 255/358 (71.23%), Postives = 275/358 (76.82%), Query Frame = 0


Query: 1   MEIPESAWMGDPCGISLANYINFYLPDNIKVFGIVPSQ---------------------- 60
           MEIP+SAWMGDPCGI LANYINFYLP+NIKVFGIVPSQ                      
Sbjct: 148 MEIPDSAWMGDPCGILLANYINFYLPENIKVFGIVPSQRSFDPRRECDVRKYTYLLPAKL 207

Query: 61  -----------------------------------------RTKVRAKQSPGYDHKSGNE 120
                                                    RT++RA QSPGY HKSG+ 
Sbjct: 208 IGIESKLTTTEIDYHISEFKDILNSFQGEHPFHNYTIRSKYRTRIRANQSPGYVHKSGDG 267

Query: 121 VSPSDVSNSEFEESDGEDDTFV-EGVKEPDQRSPSLSVCYENPTEVCSKLGDGSELPKGV 180
           VS SD+SNSEFEESDGE+D FV  G+KEP+Q SPSLS C EN  EVCSKLG+GSELP+GV
Sbjct: 268 VSSSDLSNSEFEESDGENDIFVGGGIKEPNQHSPSLSGCNENTFEVCSKLGNGSELPQGV 327

Query: 181 RARWLHEPDEKDRIGASHFRKILCCSCGKLETSFGYDFIEISIWGESFMLHQIRKMIGTA 240
           RARWLHEPDE+DRIGASHFRKILCCSCGKLETS GYDF+EISIWGESFMLHQIRKM+GTA
Sbjct: 328 RARWLHEPDERDRIGASHFRKILCCSCGKLETSLGYDFVEISIWGESFMLHQIRKMVGTA 387

Query: 241 VAVKRKLLPRDIIALSLTKFSRIVLPIAPAEVLVLRGNSFSNRKRPGVSKRPDLLTLNES 295
           +AVKRKLLPRDIIALSL+KFSRIVLPIAPAEVLVLRGN FSNRKRPG  KRPDLLTLN+S
Sbjct: 388 IAVKRKLLPRDIIALSLSKFSRIVLPIAPAEVLVLRGNRFSNRKRPGAPKRPDLLTLNKS 447

[Close]

BLAST of HG10021764 vs. NCBI nr
Match: XP_022964935.1 (putative tRNA pseudouridine synthase [Cucurbita moschata])

HSP 1 Score: 498.4 bits (1282), Expect = 4.2e-137
Identity = 253/357 (70.87%), Postives = 272/357 (76.19%), Query Frame = 0


Query: 1   MEIPESAWMGDPCGISLANYINFYLPDNIKVFGIVPSQ---------------------- 60
           MEIP+SAWMGDPCGI LANYINFYLP+NI+VFGIVPSQ                      
Sbjct: 148 MEIPDSAWMGDPCGILLANYINFYLPENIRVFGIVPSQRSFDPRRECDVRKYTYLLPAKL 207

Query: 61  -----------------------------------------RTKVRAKQSPGYDHKSGNE 120
                                                    RT++R  QSPGY HKSG+ 
Sbjct: 208 IGIESKLTTTEIDYHISEFKDILNSFQGEHPFHNYTIRSKYRTRIRTNQSPGYVHKSGDG 267

Query: 121 VSPSDVSNSEFEESDGEDDTFVEGVKEPDQRSPSLSVCYENPTEVCSKLGDGSELPKGVR 180
           VS SD+SNSEFEESDGE+D FV G+KEP+Q SPSLS  YEN  EVCSKLG+GSELP+GVR
Sbjct: 268 VSSSDLSNSEFEESDGENDIFVGGIKEPNQHSPSLSGSYENTFEVCSKLGNGSELPQGVR 327

Query: 181 ARWLHEPDEKDRIGASHFRKILCCSCGKLETSFGYDFIEISIWGESFMLHQIRKMIGTAV 240
           ARWLHEPDEKDRIGASHFRKIL CSCGKLETS GYDF+EISIWGESFMLHQIRKM+GTA+
Sbjct: 328 ARWLHEPDEKDRIGASHFRKILYCSCGKLETSLGYDFVEISIWGESFMLHQIRKMVGTAI 387

Query: 241 AVKRKLLPRDIIALSLTKFSRIVLPIAPAEVLVLRGNSFSNRKRPGVSKRPDLLTLNESD 295
           AVKRKLLPRDIIALSL+KFSRIVLPIAPAEVLVLRGN FSNRKRPG  KRPDLLTLNES 
Sbjct: 388 AVKRKLLPRDIIALSLSKFSRIVLPIAPAEVLVLRGNRFSNRKRPGAPKRPDLLTLNESH 447

[Close]

BLAST of HG10021764 vs. ExPASy Swiss-Prot
Match: O22928 (Putative tRNA pseudouridine synthase OS=Arabidopsis thaliana OX=3702 GN=At2g30320 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 7.4e-68
Identity = 143/353 (40.51%), Postives = 204/353 (57.79%), Query Frame = 0


Query: 1   MEIPESAWMGDPCGISLANYINFYLPDNIKVFGIVPS----------------------- 60
           MEIPE+AW  DP G  LA  I+ +LP+NI+VF ++PS                       
Sbjct: 139 MEIPETAWKDDPQGTVLAKCISKHLPENIRVFSVLPSNRRFDPRRECTLRKYSYLLPVDV 198

Query: 61  ------------------------------------QRTKVRAKQSPGYDHKSGNEVSPS 120
                                               QR++ R K       ++G    P 
Sbjct: 199 LGIKNSFTSDEIDYHITDFNEILKEFEGEYPFHNYTQRSRYRRKSEQKIKQRNGR--PPR 258

Query: 121 DVSNSEFEESDGEDDTFVEGVKEPDQRSPSLSVCYENPTEVCSKLGDGSELPKGVRARWL 180
           +  + +  ES+  ++  +E  +E +++     V  E+   V +   D S++    RA+WL
Sbjct: 259 EPKSIKASESEFREENHIEIGEEEEEK----EVDGESDEHVVTPDSDNSQVYS--RAKWL 318

Query: 181 HEPDEKDRIGASHFRKILCCSCGKLETSFGYDFIEISIWGESFMLHQIRKMIGTAVAVKR 240
           +EPDE D+I  +HFRK+  C  GKLE S G+ F+EISIWGESFMLHQIRKMIGTAVAVKR
Sbjct: 319 YEPDETDKISGAHFRKVFRCRSGKLENSLGFGFVEISIWGESFMLHQIRKMIGTAVAVKR 378

Query: 241 KLLPRDIIALSLTKFSRIVLPIAPAEVLVLRGNSFSNRKRPGVSKRPDLLTLNESDDIVK 295
           +LLPRDII LSL KF+RIVLP+AP+EVL+LRGNSF  R+ P   +RP +    ES+++ K
Sbjct: 379 ELLPRDIIRLSLNKFTRIVLPLAPSEVLILRGNSFEVRRLP---ERPGMEATGESEEVEK 438

[Close]

BLAST of HG10021764 vs. ExPASy Swiss-Prot
Match: Q59S63 (tRNA pseudouridine synthase 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=PUS1 PE=3 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 1.8e-05
Identity = 43/146 (29.45%), Postives = 70/146 (47.95%), Query Frame = 0


Query: 151 GYDFIEISIWGESFMLHQIRKMIGTAVAVKRKLLPRDIIALSLTKFSRIVLPIAPAEVLV 210
           G ++I I I G+SFMLHQIRKMI  A  V R  LP  II  +  + ++I +P APA  L+
Sbjct: 432 GTEWISIKIHGQSFMLHQIRKMIAMAALVVRLSLPCGIIN-NFFQSTKINIPKAPALGLL 491

Query: 211 LRGNSFSNRKRPGVSKRPDLLTLNESDDIVKSVNEFYKSMILPEVTNFLDAERPPWKEWV 270
           L    F            + +   + D   K +NEF    I  ++    +++   +  + 
Sbjct: 492 LENPVFDGYNIKLTKSDYEPIDFTKFD---KEMNEFKMKYIYDKI-YAEESKENIFYGFF 551

Query: 271 EKLDEYTGIPNEQLDEVRNAWKAWNY 297
             +D Y G  NE  + ++N    +++
Sbjct: 552 GYIDAYRGNKNEDGEPIQNGASIFDF 572

[Close]

BLAST of HG10021764 vs. ExPASy Swiss-Prot
Match: P53167 (tRNA pseudouridine(27/28) synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PUS2 PE=1 SV=4)

HSP 1 Score: 47.4 bits (111), Expect = 3.4e-04
Identity = 33/85 (38.82%), Postives = 44/85 (51.76%), Query Frame = 0


Query: 154 FIEISIWGESFMLHQIRKMIGTAVAVKRKLLPRDIIALSLTKFSRIVLPIAPAEVLVLRG 213
           +I + I G+SFMLHQIR+M+  AV   R  LP +I+        R  +P APA+ L+L G
Sbjct: 246 WICVRIHGQSFMLHQIRRMVALAVLAARCQLPPNIVRNYFNAGPRKYIPRAPAQGLLLEG 305

Query: 214 NSFSN-----RKRPGVSKRPDLLTL 234
             F       R       RPD +TL
Sbjct: 306 PVFDGYNTKLRNLLYCEIRPDDITL 330

[Close]

BLAST of HG10021764 vs. ExPASy Swiss-Prot
Match: Q9WU56 (tRNA pseudouridine synthase A OS=Mus musculus OX=10090 GN=Pus1 PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 4.4e-04
Identity = 41/139 (29.50%), Postives = 64/139 (46.04%), Query Frame = 0


Query: 136 RKILCCSCGKLETSFGYDFIEISIWGESFMLHQIRKMIGTAVAVKRKLLPRDIIALSLTK 195
           R IL   C +     G +F  I + G+SFM+HQIRKM+G  VA+ +   P  ++  S  +
Sbjct: 257 RYILEMYCEEPFVREGLEFAVIKVKGQSFMMHQIRKMVGLVVAIVKGYAPESVLERSWGE 316

Query: 196 FSRIVLPIAPAEVLVLRGNSFSN-RKRPGVSKRPDLLTLNESDDIVKSVNEFYKSMILPE 255
             ++ +P AP   LVL    F    +R G     + L   + +  V +  E Y   I P 
Sbjct: 317 -EKVDVPKAPGLGLVLERVHFEKYNQRFGGDGLHEPLDWTQEEGKVTAFKEQY---IYPT 376

Query: 256 VTNFLDAERPPWKEWVEKL 274
           + +    ER    +W+  L
Sbjct: 377 IVSTERDER-SMAQWLNTL 390

[Close]

BLAST of HG10021764 vs. ExPASy Swiss-Prot
Match: Q6CC39 (tRNA pseudouridine synthase 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=PUS1 PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 7.5e-04
Identity = 38/107 (35.51%), Postives = 57/107 (53.27%), Query Frame = 0


Query: 151 GYDFIEISIWGESFMLHQIRKMIG-TAVAVKRKLLPRDIIALSLTKFSRIVLPIAPAEVL 210
           G +++ I I G+SFMLHQIRKMI   A++V+    P+ +I  +  K +RI +P APA  L
Sbjct: 355 GTEWVSIKIHGQSFMLHQIRKMISMVALSVRCNADPQKLIPQTFEK-ARINIPKAPALGL 414

Query: 211 VLRGNSFS--NRKRPGVSKRPDLLTLNESDDIVKSVNEFYKSMILPE 255
           +L    +   N+K  G   R  +   N +D I    ++F    I  E
Sbjct: 415 LLERPVYDSYNKKLQGEFGREGVHFDNWNDQIEAFKHKFIYDKIYAE 460

[Close]

BLAST of HG10021764 vs. ExPASy TrEMBL
Match: A0A1S3C5W1 (putative tRNA pseudouridine synthase OS=Cucumis melo OX=3656 GN=LOC103497029 PE=3 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 6.1e-142
Identity = 265/362 (73.20%), Postives = 279/362 (77.07%), Query Frame = 0


Query: 1   MEIPESAWMGDPCGISLANYINFYLPDNIKVFGIVPSQ---------------------- 60
           MEIPESAWMGDPCGISLA+YIN YLPDNIKVFGIVPSQ                      
Sbjct: 148 MEIPESAWMGDPCGISLADYINSYLPDNIKVFGIVPSQRSFDPRKECDVRKYSYLLPAKL 207

Query: 61  -----------------------------------------RTKVRAKQSPGYDHKSGNE 120
                                                    RT++RAKQSPGY  KSGN+
Sbjct: 208 IGIESKLKTTEIDCHISDFKDILNSFEGEHPFHNYTIRSNYRTRIRAKQSPGYALKSGNK 267

Query: 121 VSPSDVSNSEFEESDGEDDTFVEGVKEPDQRSPSLSVCYENPTEVCSKLGDGSELPKGVR 180
           VSP ++SN EFEESD EDDTFVEGVKEPDQ SPSLSVC EN TEVCSKL DGSEL KGVR
Sbjct: 268 VSPGEMSNFEFEESDREDDTFVEGVKEPDQCSPSLSVC-ENLTEVCSKLEDGSELLKGVR 327

Query: 181 ARWLHEPDEKDRIGASHFRKILCCSCGKLETSFGYDFIEISIWGESFMLHQIRKMIGTAV 240
           ARWLHEPDEKDRIGASHFR+ILCCSCGKLETSFGYDFIEISIWGESFMLHQIRKMIGTAV
Sbjct: 328 ARWLHEPDEKDRIGASHFRRILCCSCGKLETSFGYDFIEISIWGESFMLHQIRKMIGTAV 387

Query: 241 AVKRKLLPRDIIALSLTKFSRIVLPIAPAEVLVLRGNSFSNRKRPGVSKRPDLLTLNESD 300
           AVKRKLLPRD+IALSLTKFSRIVLPIAPAEVLVLRGNSFS RKRPGV  RPDL+TLNESD
Sbjct: 388 AVKRKLLPRDVIALSLTKFSRIVLPIAPAEVLVLRGNSFSTRKRPGVPTRPDLVTLNESD 447

[Close]

BLAST of HG10021764 vs. ExPASy TrEMBL
Match: A0A6J1I156 (putative tRNA pseudouridine synthase OS=Cucurbita maxima OX=3661 GN=LOC111469569 PE=3 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 3.1e-138
Identity = 255/358 (71.23%), Postives = 275/358 (76.82%), Query Frame = 0


Query: 1   MEIPESAWMGDPCGISLANYINFYLPDNIKVFGIVPSQ---------------------- 60
           MEIP+SAWMGDPCGI LANYINFYLP+NIKVFGIVPSQ                      
Sbjct: 148 MEIPDSAWMGDPCGILLANYINFYLPENIKVFGIVPSQRSFDPRRECDVRKYTYLLPAKL 207

Query: 61  -----------------------------------------RTKVRAKQSPGYDHKSGNE 120
                                                    RT++RA QSPGY HKSG+ 
Sbjct: 208 IGIESKLTTTEIDYHISEFKDILNSFQGEHPFHNYTIRSKYRTRIRANQSPGYVHKSGDG 267

Query: 121 VSPSDVSNSEFEESDGEDDTFV-EGVKEPDQRSPSLSVCYENPTEVCSKLGDGSELPKGV 180
           VS SD+SNSEFEESDGE+D FV  G+KEP+Q SPSLS C EN  EVCSKLG+GSELP+GV
Sbjct: 268 VSSSDLSNSEFEESDGENDIFVGGGIKEPNQHSPSLSGCNENTFEVCSKLGNGSELPQGV 327

Query: 181 RARWLHEPDEKDRIGASHFRKILCCSCGKLETSFGYDFIEISIWGESFMLHQIRKMIGTA 240
           RARWLHEPDE+DRIGASHFRKILCCSCGKLETS GYDF+EISIWGESFMLHQIRKM+GTA
Sbjct: 328 RARWLHEPDERDRIGASHFRKILCCSCGKLETSLGYDFVEISIWGESFMLHQIRKMVGTA 387

Query: 241 VAVKRKLLPRDIIALSLTKFSRIVLPIAPAEVLVLRGNSFSNRKRPGVSKRPDLLTLNES 295
           +AVKRKLLPRDIIALSL+KFSRIVLPIAPAEVLVLRGN FSNRKRPG  KRPDLLTLN+S
Sbjct: 388 IAVKRKLLPRDIIALSLSKFSRIVLPIAPAEVLVLRGNRFSNRKRPGAPKRPDLLTLNKS 447

[Close]

BLAST of HG10021764 vs. ExPASy TrEMBL
Match: A0A6J1HM83 (putative tRNA pseudouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111464888 PE=3 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 2.0e-137
Identity = 253/357 (70.87%), Postives = 272/357 (76.19%), Query Frame = 0


Query: 1   MEIPESAWMGDPCGISLANYINFYLPDNIKVFGIVPSQ---------------------- 60
           MEIP+SAWMGDPCGI LANYINFYLP+NI+VFGIVPSQ                      
Sbjct: 148 MEIPDSAWMGDPCGILLANYINFYLPENIRVFGIVPSQRSFDPRRECDVRKYTYLLPAKL 207

Query: 61  -----------------------------------------RTKVRAKQSPGYDHKSGNE 120
                                                    RT++R  QSPGY HKSG+ 
Sbjct: 208 IGIESKLTTTEIDYHISEFKDILNSFQGEHPFHNYTIRSKYRTRIRTNQSPGYVHKSGDG 267

Query: 121 VSPSDVSNSEFEESDGEDDTFVEGVKEPDQRSPSLSVCYENPTEVCSKLGDGSELPKGVR 180
           VS SD+SNSEFEESDGE+D FV G+KEP+Q SPSLS  YEN  EVCSKLG+GSELP+GVR
Sbjct: 268 VSSSDLSNSEFEESDGENDIFVGGIKEPNQHSPSLSGSYENTFEVCSKLGNGSELPQGVR 327

Query: 181 ARWLHEPDEKDRIGASHFRKILCCSCGKLETSFGYDFIEISIWGESFMLHQIRKMIGTAV 240
           ARWLHEPDEKDRIGASHFRKIL CSCGKLETS GYDF+EISIWGESFMLHQIRKM+GTA+
Sbjct: 328 ARWLHEPDEKDRIGASHFRKILYCSCGKLETSLGYDFVEISIWGESFMLHQIRKMVGTAI 387

Query: 241 AVKRKLLPRDIIALSLTKFSRIVLPIAPAEVLVLRGNSFSNRKRPGVSKRPDLLTLNESD 295
           AVKRKLLPRDIIALSL+KFSRIVLPIAPAEVLVLRGN FSNRKRPG  KRPDLLTLNES 
Sbjct: 388 AVKRKLLPRDIIALSLSKFSRIVLPIAPAEVLVLRGNRFSNRKRPGAPKRPDLLTLNESH 447

[Close]

BLAST of HG10021764 vs. ExPASy TrEMBL
Match: A0A6J1DMV6 (putative tRNA pseudouridine synthase isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022025 PE=3 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 7.7e-137
Identity = 251/357 (70.31%), Postives = 270/357 (75.63%), Query Frame = 0


Query: 1   MEIPESAWMGDPCGISLANYINFYLPDNIKVFGIVPSQRT-------------------- 60
           MEIPE+AWMGDPCGI LANYINFYLPDNIKVFGIVPSQR+                    
Sbjct: 147 MEIPENAWMGDPCGILLANYINFYLPDNIKVFGIVPSQRSFDPRRECDVRKYSYLLPAKL 206

Query: 61  -------------------------------------------KVRAKQSPGYDHKSGNE 120
                                                       +RA+QSPGY H SG E
Sbjct: 207 IGIESKFNTTEIDHHISEFKDILNSFQGEHPFHNYTIRSKYRKTIRARQSPGYGHNSGEE 266

Query: 121 VSPSDVSNSEFEESDGEDDTFVEGVKEPDQRSPSLSVCYENPTEVCSKLGDGSELPKGVR 180
           VSPS +SNS FEESD ED+ FVEGVK P+Q +P LSVC E+P EVCSKLG+GSEL KGVR
Sbjct: 267 VSPSGMSNSGFEESDSEDNFFVEGVKGPNQHAPRLSVCCEDPVEVCSKLGNGSELQKGVR 326

Query: 181 ARWLHEPDEKDRIGASHFRKILCCSCGKLETSFGYDFIEISIWGESFMLHQIRKMIGTAV 240
           ARWLHEPDEKDRIGASHFRKILCCSCGKLETS GYDF+EISIWGESFMLHQIRKM+GTAV
Sbjct: 327 ARWLHEPDEKDRIGASHFRKILCCSCGKLETSLGYDFVEISIWGESFMLHQIRKMVGTAV 386

Query: 241 AVKRKLLPRDIIALSLTKFSRIVLPIAPAEVLVLRGNSFSNRKRPGVSKRPDLLTLNESD 295
           AVKRKLLPRDIIALSLTKFSRIVLPIAPAEVLVLRGNSFSN KRPG  KRPDLLTLN+SD
Sbjct: 387 AVKRKLLPRDIIALSLTKFSRIVLPIAPAEVLVLRGNSFSNGKRPGAPKRPDLLTLNKSD 446

[Close]

BLAST of HG10021764 vs. ExPASy TrEMBL
Match: A0A6J1DQ07 (putative tRNA pseudouridine synthase isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022025 PE=3 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 7.7e-137
Identity = 251/357 (70.31%), Postives = 270/357 (75.63%), Query Frame = 0


Query: 1   MEIPESAWMGDPCGISLANYINFYLPDNIKVFGIVPSQRT-------------------- 60
           MEIPE+AWMGDPCGI LANYINFYLPDNIKVFGIVPSQR+                    
Sbjct: 147 MEIPENAWMGDPCGILLANYINFYLPDNIKVFGIVPSQRSFDPRRECDVRKYSYLLPAKL 206

Query: 61  -------------------------------------------KVRAKQSPGYDHKSGNE 120
                                                       +RA+QSPGY H SG E
Sbjct: 207 IGIESKFNTTEIDHHISEFKDILNSFQGEHPFHNYTIRSKYRKTIRARQSPGYGHNSGEE 266

Query: 121 VSPSDVSNSEFEESDGEDDTFVEGVKEPDQRSPSLSVCYENPTEVCSKLGDGSELPKGVR 180
           VSPS +SNS FEESD ED+ FVEGVK P+Q +P LSVC E+P EVCSKLG+GSEL KGVR
Sbjct: 267 VSPSGMSNSGFEESDSEDNFFVEGVKGPNQHAPRLSVCCEDPVEVCSKLGNGSELQKGVR 326

Query: 181 ARWLHEPDEKDRIGASHFRKILCCSCGKLETSFGYDFIEISIWGESFMLHQIRKMIGTAV 240
           ARWLHEPDEKDRIGASHFRKILCCSCGKLETS GYDF+EISIWGESFMLHQIRKM+GTAV
Sbjct: 327 ARWLHEPDEKDRIGASHFRKILCCSCGKLETSLGYDFVEISIWGESFMLHQIRKMVGTAV 386

Query: 241 AVKRKLLPRDIIALSLTKFSRIVLPIAPAEVLVLRGNSFSNRKRPGVSKRPDLLTLNESD 295
           AVKRKLLPRDIIALSLTKFSRIVLPIAPAEVLVLRGNSFSN KRPG  KRPDLLTLN+SD
Sbjct: 387 AVKRKLLPRDIIALSLTKFSRIVLPIAPAEVLVLRGNSFSNGKRPGAPKRPDLLTLNKSD 446

[Close]

BLAST of HG10021764 vs. TAIR 10
Match: AT2G30320.1 (Pseudouridine synthase family protein )

HSP 1 Score: 258.8 bits (660), Expect = 5.2e-69
Identity = 143/353 (40.51%), Postives = 204/353 (57.79%), Query Frame = 0


Query: 1   MEIPESAWMGDPCGISLANYINFYLPDNIKVFGIVPS----------------------- 60
           MEIPE+AW  DP G  LA  I+ +LP+NI+VF ++PS                       
Sbjct: 139 MEIPETAWKDDPQGTVLAKCISKHLPENIRVFSVLPSNRRFDPRRECTLRKYSYLLPVDV 198

Query: 61  ------------------------------------QRTKVRAKQSPGYDHKSGNEVSPS 120
                                               QR++ R K       ++G    P 
Sbjct: 199 LGIKNSFTSDEIDYHITDFNEILKEFEGEYPFHNYTQRSRYRRKSEQKIKQRNGR--PPR 258

Query: 121 DVSNSEFEESDGEDDTFVEGVKEPDQRSPSLSVCYENPTEVCSKLGDGSELPKGVRARWL 180
           +  + +  ES+  ++  +E  +E +++     V  E+   V +   D S++    RA+WL
Sbjct: 259 EPKSIKASESEFREENHIEIGEEEEEK----EVDGESDEHVVTPDSDNSQVYS--RAKWL 318

Query: 181 HEPDEKDRIGASHFRKILCCSCGKLETSFGYDFIEISIWGESFMLHQIRKMIGTAVAVKR 240
           +EPDE D+I  +HFRK+  C  GKLE S G+ F+EISIWGESFMLHQIRKMIGTAVAVKR
Sbjct: 319 YEPDETDKISGAHFRKVFRCRSGKLENSLGFGFVEISIWGESFMLHQIRKMIGTAVAVKR 378

Query: 241 KLLPRDIIALSLTKFSRIVLPIAPAEVLVLRGNSFSNRKRPGVSKRPDLLTLNESDDIVK 295
           +LLPRDII LSL KF+RIVLP+AP+EVL+LRGNSF  R+ P   +RP +    ES+++ K
Sbjct: 379 ELLPRDIIRLSLNKFTRIVLPLAPSEVLILRGNSFEVRRLP---ERPGMEATGESEEVEK 438

[Close]

BLAST of HG10021764 vs. TAIR 10
Match: AT1G20370.1 (Pseudouridine synthase family protein )

HSP 1 Score: 59.7 bits (143), Expect = 4.7e-09
Identity = 34/76 (44.74%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 136 RKILCCSCGKLETSFGYDFIEISIWGESFMLHQIRKMIGTAVAVKRKLLPRDIIALSLTK 195
           R IL  +   +    G DF++  + G+SFMLHQIRKMIG AVA+ R   P  +I  S  K
Sbjct: 350 RYILSFNANTVINLDGKDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNYAPESLIEASFKK 409

Query: 196 FSRIVLPIAPAEVLVL 212
             RI +P+AP   L L
Sbjct: 410 DVRINVPMAPEVGLYL 425

[Close]

BLAST of HG10021764 vs. TAIR 10
Match: AT1G76120.1 (Pseudouridine synthase family protein )

HSP 1 Score: 56.2 bits (134), Expect = 5.1e-08
Identity = 32/86 (37.21%), Postives = 48/86 (55.81%), Query Frame = 0


Query: 136 RKILCCSCGKLETSFGYDFIEISIWGESFMLHQIRKMIGTAVAVKRKLLPRDIIALSLTK 195
           R+I+  +   +    G DFI+  + G+SFMLHQIRKM+G AVA+ R      +I  + +K
Sbjct: 297 RQIISFTANTVINLDGIDFIKCEVLGKSFMLHQIRKMMGLAVAIMRNCASESLIQSAFSK 356

Query: 196 FSRIVLPIAPAEVLVLRGNSFSNRKR 222
              I +P+AP   L L    F++  R
Sbjct: 357 DVNITVPMAPEVGLYLDECFFTSYNR 382

[Close]

BLAST of HG10021764 vs. TAIR 10
Match: AT1G76120.2 (Pseudouridine synthase family protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.8e-05
Identity = 24/60 (40.00%), Postives = 36/60 (60.00%), Query Frame = 0


Query: 136 RKILCCSCGKLETSFGYDFIEISIWGESFMLHQIRKMIGTAVAVKRKLLPRDIIALSLTK 195
           R+I+  +   +    G DFI+  + G+SFMLHQIRKM+G AVA+ R      +I  + +K
Sbjct: 297 RQIISFTANTVINLDGIDFIKCEVLGKSFMLHQIRKMMGLAVAIMRNCASESLIQSAFSK 356

The following BLAST results are available for this feature:

BLAST of HG10021764 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894774.1	4.6e-152	76.80	putative tRNA pseudouridine synthase isoform X1 [Benincasa hispida]	[more]
XP_038894775.1	4.6e-152	76.80	putative tRNA pseudouridine synthase isoform X2 [Benincasa hispida]	[more]
XP_008457308.1	1.3e-141	73.20	PREDICTED: putative tRNA pseudouridine synthase [Cucumis melo]	[more]
XP_022970646.1	6.5e-138	71.23	putative tRNA pseudouridine synthase [Cucurbita maxima]	[more]
XP_022964935.1	4.2e-137	70.87	putative tRNA pseudouridine synthase [Cucurbita moschata]	[more]

BLAST of HG10021764 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22928	7.4e-68	40.51	Putative tRNA pseudouridine synthase OS=Arabidopsis thaliana OX=3702 GN=At2g3032...	[more]
Q59S63	1.8e-05	29.45	tRNA pseudouridine synthase 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876...	[more]
P53167	3.4e-04	38.82	tRNA pseudouridine(27/28) synthase OS=Saccharomyces cerevisiae (strain ATCC 2045...	[more]
Q9WU56	4.4e-04	29.50	tRNA pseudouridine synthase A OS=Mus musculus OX=10090 GN=Pus1 PE=1 SV=2	[more]
Q6CC39	7.5e-04	35.51	tRNA pseudouridine synthase 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) O...	[more]

BLAST of HG10021764 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C5W1	6.1e-142	73.20	putative tRNA pseudouridine synthase OS=Cucumis melo OX=3656 GN=LOC103497029 PE=...	[more]
A0A6J1I156	3.1e-138	71.23	putative tRNA pseudouridine synthase OS=Cucurbita maxima OX=3661 GN=LOC111469569...	[more]
A0A6J1HM83	2.0e-137	70.87	putative tRNA pseudouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC1114648...	[more]
A0A6J1DMV6	7.7e-137	70.31	putative tRNA pseudouridine synthase isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DQ07	7.7e-137	70.31	putative tRNA pseudouridine synthase isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of HG10021764 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30320.1	5.2e-69	40.51	Pseudouridine synthase family protein	[more]
AT1G20370.1	4.7e-09	44.74	Pseudouridine synthase family protein	[more]
AT1G76120.1	5.1e-08	37.21	Pseudouridine synthase family protein	[more]
AT1G76120.2	1.8e-05	40.00	Pseudouridine synthase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020097	Pseudouridine synthase I, TruA, alpha/beta domain	PFAM	PF01416	PseudoU_synth_1	coord: 147..211 e-value: 1.5E-6 score: 28.6
IPR020095	Pseudouridine synthase I, TruA, C-terminal	GENE3D	3.30.70.660		coord: 124..282 e-value: 1.9E-27 score: 98.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..91
None	No IPR available	PANTHER	PTHR11142:SF21	TRNA PSEUDOURIDINE SYNTHASE	coord: 96..296
IPR001406	Pseudouridine synthase I, TruA	PANTHER	PTHR11142	PSEUDOURIDYLATE SYNTHASE	coord: 96..296
IPR020103	Pseudouridine synthase, catalytic domain superfamily	SUPERFAMILY	55120	Pseudouridine synthase	coord: 132..218

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021764.1	HG10021764.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0008033	tRNA processing
biological_process	GO:0009451	RNA modification
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003723	RNA binding