HG10021661 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021661
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	leucine-rich repeat extensin-like protein 3
Location	Chr05: 13402021 .. 13403183 (-)
RNA-Seq Expression	HG10021661
Synteny	HG10021661

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACTCCAAGGTCATTCTTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTCATACAACACTTCACATTTCTCTTTCTTTCTTCATTCTGATAATACCCTTTTCATTTTCTCTTCTGATATTCTTTGTTTTTTATTCTTTGATTTTTGAGTTTCATGTCTCTGTTTTACTATTACTACAGAAGGTTGTCGTCATGATGCTTAAAGTGGACTTACAGTGTGATCGCTGCTACAAGAAAGTCAAGAAAGTTCTCTGCAAATTCCCTCGTGAGTTCTTCTTTTCTTCCTTTCTGTGAATTTCTTTTTTCATTTTGTAATAGAATTCCGATGACTGAGTTGATCATTTTTTTGAACAAGAGAAATTCGAGACCAGATTTATGATGAAAAACAAAACCTTGTGATTATCAAAGTGGTTTGTTGCAATCCTGAGAAGCTCAGAGATAAAATTTGCTGTAAGGGATGTGGGGTTATTAAAAGCATTGAAATCAAAGACCCTGAAATTCCCAAGCCTCCTCCGCCCAAGCCTGCCGATCCTCCGCCCCCCAAAAAGGCCGATCCGCCGCCACTCAAGAAGGCCGATCCTCCGCCTCCTAAAAAACCCGATCCTCCGCCTCCTAAAAAACCCGATCCCCCACCACCCCAAAAGGTCGATCCTCCGCCTCCCAAAAAAGCCGATCCACCACCCCCTAAAAAGACCGACCCACCGCCACCCAAGAAAGCCGCCGACCCTCCTCCGCCCAAAAAAGCCGACCCTCCTCCTCCTCAAAAGGTCGACCCTCCGCCGCCCAAAAAGGCTGACCCTCCACCCCCGAAGGCGGACCCTCCGCCTCCAAAGAAAGTCGATCCTCCACCGGTAGTGGTCCCAGAGCCCACCCCGGTTCACATTCCGACTCCGGTTCAACCCGAGCCGTATCCGGTAAACATGTGCGTGCCGGTTCCGGGTTACCCTCCGGGTTACCCGATTGGGGTGTGCTGCAGGCAGTGTTCTGAAGGGCGGGGTGGGGGCCCATGCTATAGTGGGTTTGGTGGGCCCGGCCCATGTTGTGATGGATGCGCTTCTGGAAGGCCCATTTACGACAGTTACGGTGGAGGGAGGCCCTGTTACGTTAGCCACTGTGAATATCTTAATGAAGAAAATGCATCTGGGTGCATTGTTATGTGA

mRNA sequence

ATGGCGGACTCCAAGGTCATTCTTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTCATACAACACTTCACATTTCTCTTTCTTTCTTCATTCTGATAATACCCTTTTCATTTTCTCTTCTGATATTCTTTGTTTTTTATTCTTTGATTTTTGAGTTTCATGTCTCTGTTTTACTATTACTACAGAAGGTTGTCGTCATGATGCTTAAAGTGGACTTACAGTGTGATCGCTGCTACAAGAAAGTCAAGAAAGTTCTCTGCAAATTCCCTCAAATTCGAGACCAGATTTATGATGAAAAACAAAACCTTGTGATTATCAAAGTGGTTTGTTGCAATCCTGAGAAGCTCAGAGATAAAATTTGCTGTAAGGGATGTGGGGTTATTAAAAGCATTGAAATCAAAGACCCTGAAATTCCCAAGCCTCCTCCGCCCAAGCCTGCCGATCCTCCGCCCCCCAAAAAGGCCGATCCGCCGCCACTCAAGAAGGCCGATCCTCCGCCTCCTAAAAAACCCGATCCTCCGCCTCCTAAAAAACCCGATCCCCCACCACCCCAAAAGGTCGATCCTCCGCCTCCCAAAAAAGCCGATCCACCACCCCCTAAAAAGACCGACCCACCGCCACCCAAGAAAGCCGCCGACCCTCCTCCGCCCAAAAAAGCCGACCCTCCTCCTCCTCAAAAGGTCGACCCTCCGCCGCCCAAAAAGGCTGACCCTCCACCCCCGAAGGCGGACCCTCCGCCTCCAAAGAAAGTCGATCCTCCACCGGTAGTGGTCCCAGAGCCCACCCCGGTTCACATTCCGACTCCGGTTCAACCCGAGCCGTATCCGGTAAACATGTGCGTGCCGGTTCCGGGTTACCCTCCGGGTTACCCGATTGGGGTGTGCTGCAGGCAGTGTTCTGAAGGGCGGGGTGGGGGCCCATGCTATAGTGGGTTTGGTGGGCCCGGCCCATGTTGTGATGGATGCGCTTCTGGAAGGCCCATTTACGACAGTTACGGTGGAGGGAGGCCCTGTTACGTTAGCCACTGTGAATATCTTAATGAAGAAAATGCATCTGGGTGCATTGTTATGTGA

Coding sequence (CDS)

ATGGCGGACTCCAAGGTCATTCTTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTCATACAACACTTCACATTTCTCTTTCTTTCTTCATTCTGATAATACCCTTTTCATTTTCTCTTCTGATATTCTTTGTTTTTTATTCTTTGATTTTTGAGTTTCATGTCTCTGTTTTACTATTACTACAGAAGGTTGTCGTCATGATGCTTAAAGTGGACTTACAGTGTGATCGCTGCTACAAGAAAGTCAAGAAAGTTCTCTGCAAATTCCCTCAAATTCGAGACCAGATTTATGATGAAAAACAAAACCTTGTGATTATCAAAGTGGTTTGTTGCAATCCTGAGAAGCTCAGAGATAAAATTTGCTGTAAGGGATGTGGGGTTATTAAAAGCATTGAAATCAAAGACCCTGAAATTCCCAAGCCTCCTCCGCCCAAGCCTGCCGATCCTCCGCCCCCCAAAAAGGCCGATCCGCCGCCACTCAAGAAGGCCGATCCTCCGCCTCCTAAAAAACCCGATCCTCCGCCTCCTAAAAAACCCGATCCCCCACCACCCCAAAAGGTCGATCCTCCGCCTCCCAAAAAAGCCGATCCACCACCCCCTAAAAAGACCGACCCACCGCCACCCAAGAAAGCCGCCGACCCTCCTCCGCCCAAAAAAGCCGACCCTCCTCCTCCTCAAAAGGTCGACCCTCCGCCGCCCAAAAAGGCTGACCCTCCACCCCCGAAGGCGGACCCTCCGCCTCCAAAGAAAGTCGATCCTCCACCGGTAGTGGTCCCAGAGCCCACCCCGGTTCACATTCCGACTCCGGTTCAACCCGAGCCGTATCCGGTAAACATGTGCGTGCCGGTTCCGGGTTACCCTCCGGGTTACCCGATTGGGGTGTGCTGCAGGCAGTGTTCTGAAGGGCGGGGTGGGGGCCCATGCTATAGTGGGTTTGGTGGGCCCGGCCCATGTTGTGATGGATGCGCTTCTGGAAGGCCCATTTACGACAGTTACGGTGGAGGGAGGCCCTGTTACGTTAGCCACTGTGAATATCTTAATGAAGAAAATGCATCTGGGTGCATTGTTATGTGA

Protein sequence

MADSKVILLSSSSSSSSSHTTLHISLSFFILIIPFSFSLLIFFVFYSLIFEFHVSVLLLLQKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKICCKGCGVIKSIEIKDPEIPKPPPPKPADPPPPKKADPPPLKKADPPPPKKPDPPPPKKPDPPPPQKVDPPPPKKADPPPPKKTDPPPPKKAADPPPPKKADPPPPQKVDPPPPKKADPPPPKADPPPPKKVDPPPVVVPEPTPVHIPTPVQPEPYPVNMCVPVPGYPPGYPIGVCCRQCSEGRGGGPCYSGFGGPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCIVM

Homology

[Close]

BLAST of HG10021661 vs. NCBI nr
Match: XP_004139513.2 (circumsporozoite protein [Cucumis sativus] >KAE8652830.1 hypothetical protein Csa_022772 [Cucumis sativus])

HSP 1 Score: 485.3 bits (1248), Expect = 4.4e-133
Identity = 266/296 (89.86%), Postives = 274/296 (92.57%), Query Frame = 0


Query: 61  QKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 120
           +KVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC
Sbjct: 6   KKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 65

Query: 121 CKGCGVIKSIEIKDPEIPKPPPPKPADPPPPKKADPPPLKKADPPPPKKPDPPPPKKPDP 180
           CKGCGVIKSIEIK+PE PKPPPPKPADPPPPKK DPPP KK DPPPP+K DPPPPKK DP
Sbjct: 66  CKGCGVIKSIEIKEPEPPKPPPPKPADPPPPKKVDPPPSKKPDPPPPQKVDPPPPKKADP 125

Query: 181 PPPQKVDPPPPKKADPPPPKKTDPPPPKKAADPPPPKKADPPPPQKVDPPPPKKADPPPP 240
           PPP+K D PPP KA        DPPPP+KAADPPPPKKADPPPP+K DPPPPKK DPPPP
Sbjct: 126 PPPKKADTPPPSKA-------ADPPPPQKAADPPPPKKADPPPPKKADPPPPKKVDPPPP 185

Query: 241 KADPPPPKKVDPPPVVVPEPTPVHIPTPVQPEPYPVNMCVPVPGYPPGYPIGVCCRQCSE 300
           KA+PPPPKKVDPPPVVVP+PTPV IP PVQPEPYPVNMCVPVPGYPPGYPIGVCCRQC E
Sbjct: 186 KANPPPPKKVDPPPVVVPQPTPVPIPVPVQPEPYPVNMCVPVPGYPPGYPIGVCCRQCHE 245

Query: 301 GRGGGPCYSGFGGPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCIVM 357
           GRGGGPCYSGFGGPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCIVM
Sbjct: 246 GRGGGPCYSGFGGPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCIVM 294

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BLAST of HG10021661 vs. NCBI nr
Match: XP_008464282.1 (PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo])

HSP 1 Score: 462.2 bits (1188), Expect = 4.0e-126
Identity = 263/301 (87.38%), Postives = 272/301 (90.37%), Query Frame = 0


Query: 61  QKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 120
           +KVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC
Sbjct: 6   KKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 65

Query: 121 CKGCGVIKSIEIKDPEIPKPPPPKPADPPPPKKADPPPLKKADPPPPKKPDPPPPKKPDP 180
           CKGCGVIKSIEIK+PE PKPPPPK ADPPPP        KK DPPPPKKPDPPPP+K DP
Sbjct: 66  CKGCGVIKSIEIKEPEPPKPPPPKHADPPPPP-------KKVDPPPPKKPDPPPPQKVDP 125

Query: 181 PPPQKVDPPPPKKADPPPPKKTDPPPPKKAADPPPPKK-ADPPPPQKVDPPPPKKADPPP 240
           PPP+K DPPPPKKADPPPPKK DPPPP KAADPPPP+K ADPPPP+K DP PPKK DPPP
Sbjct: 126 PPPKKADPPPPKKADPPPPKKPDPPPPSKAADPPPPQKAADPPPPKKADPAPPKKVDPPP 185

Query: 241 PKAD--PPPPKKVDPPPVVVPEPTPVHIPTPVQPEPYPVNMCVPVPGYPPGYP--IGVCC 300
            KA+  PPPPKKVDPPPVVVP+P PV IP PVQPEPYPVNMCVPVPGYPPGYP  IGVCC
Sbjct: 186 AKAEPPPPPPKKVDPPPVVVPQPNPVPIPVPVQPEPYPVNMCVPVPGYPPGYPVGIGVCC 245

Query: 301 RQCSEGRGGGPCYSGFGGPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCIV 357
           RQC EGRGGGPCYSGFGG GPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGC+V
Sbjct: 246 RQCYEGRGGGPCYSGFGGTGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCVV 299

[Close]

BLAST of HG10021661 vs. NCBI nr
Match: XP_022927590.1 (leucine-rich repeat extensin-like protein 3 isoform X5 [Cucurbita moschata])

HSP 1 Score: 425.2 bits (1092), Expect = 5.4e-115
Identity = 255/305 (83.61%), Postives = 262/305 (85.90%), Query Frame = 0


Query: 61  QKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 120
           +K VVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC
Sbjct: 5   KKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 64

Query: 121 CKGCGVIKSIEIK-----DPEIPKPPPPKPADPPPPKKADPPPLKKADPPPPKKPDPPPP 180
           CKGCGVIKSIEIK      P+ P PPPPK ADPPPP K DPPP KKADPPPP K DPPPP
Sbjct: 65  CKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPP-KADPPPP 124

Query: 181 KKPDPPPPQKVDPPPPKKADPPPPKKTDPPPPKKAADPPPPKKADPPPPQKVDPPPPKKA 240
           KK DPPPP K DPPPPKKADPPPPKK DPPPPK  ADPPPPKKADPPPP K DPPPPKKA
Sbjct: 125 KKADPPPP-KADPPPPKKADPPPPKKADPPPPK--ADPPPPKKADPPPP-KADPPPPKKA 184

Query: 241 DPPPP-KADPPPPKKVDPPPVVVPEPTP---VHIPTPVQPEPYPVNMCVPVPGYPPGYPI 300
           DPPPP KADPPPPKK DPPP    +P P   V    P QPEP+PVN+CVPVPGYPP YPI
Sbjct: 185 DPPPPKKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPI 244

Query: 301 GVCCRQCSEGRGGGPCYSGFGGPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENAS 357
           G+CC QC EG+GGGPCYSGFG PGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENAS
Sbjct: 245 GMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENAS 304

[Close]

BLAST of HG10021661 vs. NCBI nr
Match: XP_022927593.1 (leucine-rich repeat extensin-like protein 3 isoform X8 [Cucurbita moschata])

HSP 1 Score: 424.5 bits (1090), Expect = 9.2e-115
Identity = 251/299 (83.95%), Postives = 259/299 (86.62%), Query Frame = 0


Query: 61  QKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 120
           +K VVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC
Sbjct: 5   KKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 64

Query: 121 CKGCGVIKSIEIKDPEIPKPPPPKPADPPPPKKADPPPLKKADPPPPKKPDPPPPKKPDP 180
           CKGCGVIKSIEIK  +   PPPPK  DPPPPKKADPPP  K DPPPPKK DPPPP K DP
Sbjct: 65  CKGCGVIKSIEIKPAD---PPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPP-KADP 124

Query: 181 PPPQKVDPPPPKKADPPPPKKTDPPPPKKAADPPPPKKADPPPPQKVDPPPPKKADPPPP 240
           PPP+K DPPPP KADPPPPKK DPPPPK  ADPPPPKKADPPPP K DPPPPKKADPPPP
Sbjct: 125 PPPKKADPPPP-KADPPPPKKADPPPPK--ADPPPPKKADPPPP-KADPPPPKKADPPPP 184

Query: 241 KADPPPPKKVDPPPVVVPEPTP---VHIPTPVQPEPYPVNMCVPVPGYPPGYPIGVCCRQ 300
           KADPPPPKK DPPP    +P P   V    P QPEP+PVN+CVPVPGYPP YPIG+CC Q
Sbjct: 185 KADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQ 244

Query: 301 CSEGRGGGPCYSGFGGPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCIVM 357
           C EG+GGGPCYSGFG PGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGC VM
Sbjct: 245 CYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 295

[Close]

BLAST of HG10021661 vs. NCBI nr
Match: XP_022927588.1 (leucine-rich repeat extensin-like protein 3 isoform X3 [Cucurbita moschata])

HSP 1 Score: 421.8 bits (1083), Expect = 6.0e-114
Identity = 256/319 (80.25%), Postives = 263/319 (82.45%), Query Frame = 0


Query: 61  QKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 120
           +K VVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC
Sbjct: 5   KKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 64

Query: 121 CKGCGVIKSIEIK-----DPEIPKPPPPKPADPPPPKKADPPPLKKADPPPPK------- 180
           CKGCGVIKSIEIK      P+ P PPPPK ADPPPP K DPPP KKADPPPPK       
Sbjct: 65  CKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPPKADPPPPK 124

Query: 181 -------KPDPPPPKKPDPPPPQKVDPPPPKKADPPPPKKTDPPPPKKAADPPPPKKADP 240
                  K DPPPPKK DPPPP K DPPPPKKADPPPPKK DPPPPK  ADPPPPKKADP
Sbjct: 125 KADPPPPKADPPPPKKADPPPP-KADPPPPKKADPPPPKKADPPPPK--ADPPPPKKADP 184

Query: 241 PPPQKVDPPPPKKADPPPP-KADPPPPKKVDPPPVVVPEPTP---VHIPTPVQPEPYPVN 300
           PPP K DPPPPKKADPPPP KADPPPPKK DPPP    +P P   V    P QPEP+PVN
Sbjct: 185 PPP-KADPPPPKKADPPPPKKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVN 244

Query: 301 MCVPVPGYPPGYPIGVCCRQCSEGRGGGPCYSGFGGPGPCCDGCASGRPIYDSYGGGRPC 357
           +CVPVPGYPP YPIG+CC QC EG+GGGPCYSGFG PGPCCDGCASGRPIYDSYGGGRPC
Sbjct: 245 ICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPC 304

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BLAST of HG10021661 vs. ExPASy Swiss-Prot
Match: P23093 (Circumsporozoite protein OS=Plasmodium berghei (strain Anka) OX=5823 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 8.6e-07
Identity = 83/156 (53.21%), Postives = 85/156 (54.49%), Query Frame = 0


Query: 140 PPPPKPADPPPPKKADPPPLKKADPPPPKKPDPPPPKKPDPPPPQKVDPPPPKKADPPPP 199
           PPPP P DPPPP   DPPP    DPPPP   DPPPP   DPPPP   DPPPP   DP PP
Sbjct: 93  PPPPNPNDPPPPNPNDPPPPNPNDPPPPNPNDPPPPNPNDPPPPNANDPPPPNANDPAPP 152

Query: 200 KKTDPPPPKKAADPPPPKKADPPPPQKVDPPPPKKADPPPPKA-DPPPPKKVDPPPV--- 259
              DP PP  A DP PP   DPPPP   DPPPP   DP PP A DPPPP   DP P    
Sbjct: 153 NANDPAPP-NANDPAPPNANDPPPPNANDPPPPNPNDPAPPNANDPPPPNPNDPAPPQGN 212

Query: 260 --VVPEPTPVHIPTP-VQPEPYPVNMCVPVPGYPPG 289
               P+P P   P P  QP+P P     P P   PG
Sbjct: 213 NNPQPQPRPQPQPQPQPQPQPQPQPQPRPQPQPQPG 247

[Close]

BLAST of HG10021661 vs. ExPASy TrEMBL
Match: A0A0A0LTA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172590 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 7.6e-131
Identity = 263/297 (88.55%), Postives = 269/297 (90.57%), Query Frame = 0


Query: 61  QKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 120
           +KVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC
Sbjct: 6   KKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 65

Query: 121 CKGCGVIKSIEIKDPEIPKPPPPKPADPPPPKKADPPPLKKADPPPPKKPDPPPPKKPDP 180
           CKGCGVIKSIEIK+PE PKPPPPKPADPPPPKK                 DPPP KKPDP
Sbjct: 66  CKGCGVIKSIEIKEPEPPKPPPPKPADPPPPKKV----------------DPPPSKKPDP 125

Query: 181 PPPQKVDPPPPKKADPPPPKKTDPPPPKKAADPPPPKK-ADPPPPQKVDPPPPKKADPPP 240
           PPPQKVDPPPPKKADPPPPKK D PPP KAADPPPP+K ADPPPP+K DPPPPKK DPPP
Sbjct: 126 PPPQKVDPPPPKKADPPPPKKADTPPPSKAADPPPPQKAADPPPPKKADPPPPKKVDPPP 185

Query: 241 PKADPPPPKKVDPPPVVVPEPTPVHIPTPVQPEPYPVNMCVPVPGYPPGYPIGVCCRQCS 300
           PKA+PPPPKKVDPPPVVVP+PTPV IP PVQPEPYPVNMCVPVPGYPPGYPIGVCCRQC 
Sbjct: 186 PKANPPPPKKVDPPPVVVPQPTPVPIPVPVQPEPYPVNMCVPVPGYPPGYPIGVCCRQCH 245

Query: 301 EGRGGGPCYSGFGGPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCIVM 357
           EGRGGGPCYSGFGGPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCIVM
Sbjct: 246 EGRGGGPCYSGFGGPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCIVM 286

[Close]

BLAST of HG10021661 vs. ExPASy TrEMBL
Match: A0A1S3CL41 (leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103502210 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.9e-126
Identity = 263/301 (87.38%), Postives = 272/301 (90.37%), Query Frame = 0


Query: 61  QKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 120
           +KVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC
Sbjct: 6   KKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 65

Query: 121 CKGCGVIKSIEIKDPEIPKPPPPKPADPPPPKKADPPPLKKADPPPPKKPDPPPPKKPDP 180
           CKGCGVIKSIEIK+PE PKPPPPK ADPPPP        KK DPPPPKKPDPPPP+K DP
Sbjct: 66  CKGCGVIKSIEIKEPEPPKPPPPKHADPPPPP-------KKVDPPPPKKPDPPPPQKVDP 125

Query: 181 PPPQKVDPPPPKKADPPPPKKTDPPPPKKAADPPPPKK-ADPPPPQKVDPPPPKKADPPP 240
           PPP+K DPPPPKKADPPPPKK DPPPP KAADPPPP+K ADPPPP+K DP PPKK DPPP
Sbjct: 126 PPPKKADPPPPKKADPPPPKKPDPPPPSKAADPPPPQKAADPPPPKKADPAPPKKVDPPP 185

Query: 241 PKAD--PPPPKKVDPPPVVVPEPTPVHIPTPVQPEPYPVNMCVPVPGYPPGYP--IGVCC 300
            KA+  PPPPKKVDPPPVVVP+P PV IP PVQPEPYPVNMCVPVPGYPPGYP  IGVCC
Sbjct: 186 AKAEPPPPPPKKVDPPPVVVPQPNPVPIPVPVQPEPYPVNMCVPVPGYPPGYPVGIGVCC 245

Query: 301 RQCSEGRGGGPCYSGFGGPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCIV 357
           RQC EGRGGGPCYSGFGG GPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGC+V
Sbjct: 246 RQCYEGRGGGPCYSGFGGTGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCVV 299

[Close]

BLAST of HG10021661 vs. ExPASy TrEMBL
Match: A0A6J1EPE4 (leucine-rich repeat extensin-like protein 3 isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111434373 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 2.6e-115
Identity = 255/305 (83.61%), Postives = 262/305 (85.90%), Query Frame = 0


Query: 61  QKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 120
           +K VVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC
Sbjct: 5   KKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 64

Query: 121 CKGCGVIKSIEIK-----DPEIPKPPPPKPADPPPPKKADPPPLKKADPPPPKKPDPPPP 180
           CKGCGVIKSIEIK      P+ P PPPPK ADPPPP K DPPP KKADPPPP K DPPPP
Sbjct: 65  CKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPP-KADPPPP 124

Query: 181 KKPDPPPPQKVDPPPPKKADPPPPKKTDPPPPKKAADPPPPKKADPPPPQKVDPPPPKKA 240
           KK DPPPP K DPPPPKKADPPPPKK DPPPPK  ADPPPPKKADPPPP K DPPPPKKA
Sbjct: 125 KKADPPPP-KADPPPPKKADPPPPKKADPPPPK--ADPPPPKKADPPPP-KADPPPPKKA 184

Query: 241 DPPPP-KADPPPPKKVDPPPVVVPEPTP---VHIPTPVQPEPYPVNMCVPVPGYPPGYPI 300
           DPPPP KADPPPPKK DPPP    +P P   V    P QPEP+PVN+CVPVPGYPP YPI
Sbjct: 185 DPPPPKKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPI 244

Query: 301 GVCCRQCSEGRGGGPCYSGFGGPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENAS 357
           G+CC QC EG+GGGPCYSGFG PGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENAS
Sbjct: 245 GMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENAS 304

[Close]

BLAST of HG10021661 vs. ExPASy TrEMBL
Match: A0A6J1ELF4 (leucine-rich repeat extensin-like protein 3 isoform X8 OS=Cucurbita moschata OX=3662 GN=LOC111434373 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 4.4e-115
Identity = 251/299 (83.95%), Postives = 259/299 (86.62%), Query Frame = 0


Query: 61  QKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 120
           +K VVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC
Sbjct: 5   KKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 64

Query: 121 CKGCGVIKSIEIKDPEIPKPPPPKPADPPPPKKADPPPLKKADPPPPKKPDPPPPKKPDP 180
           CKGCGVIKSIEIK  +   PPPPK  DPPPPKKADPPP  K DPPPPKK DPPPP K DP
Sbjct: 65  CKGCGVIKSIEIKPAD---PPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPP-KADP 124

Query: 181 PPPQKVDPPPPKKADPPPPKKTDPPPPKKAADPPPPKKADPPPPQKVDPPPPKKADPPPP 240
           PPP+K DPPPP KADPPPPKK DPPPPK  ADPPPPKKADPPPP K DPPPPKKADPPPP
Sbjct: 125 PPPKKADPPPP-KADPPPPKKADPPPPK--ADPPPPKKADPPPP-KADPPPPKKADPPPP 184

Query: 241 KADPPPPKKVDPPPVVVPEPTP---VHIPTPVQPEPYPVNMCVPVPGYPPGYPIGVCCRQ 300
           KADPPPPKK DPPP    +P P   V    P QPEP+PVN+CVPVPGYPP YPIG+CC Q
Sbjct: 185 KADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQ 244

Query: 301 CSEGRGGGPCYSGFGGPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCIVM 357
           C EG+GGGPCYSGFG PGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGC VM
Sbjct: 245 CYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 295

[Close]

BLAST of HG10021661 vs. ExPASy TrEMBL
Match: A0A6J1ELE8 (leucine-rich repeat extensin-like protein 3 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111434373 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 2.9e-114
Identity = 256/319 (80.25%), Postives = 263/319 (82.45%), Query Frame = 0


Query: 61  QKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 120
           +K VVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC
Sbjct: 5   KKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 64

Query: 121 CKGCGVIKSIEIK-----DPEIPKPPPPKPADPPPPKKADPPPLKKADPPPPK------- 180
           CKGCGVIKSIEIK      P+ P PPPPK ADPPPP K DPPP KKADPPPPK       
Sbjct: 65  CKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPPKADPPPPK 124

Query: 181 -------KPDPPPPKKPDPPPPQKVDPPPPKKADPPPPKKTDPPPPKKAADPPPPKKADP 240
                  K DPPPPKK DPPPP K DPPPPKKADPPPPKK DPPPPK  ADPPPPKKADP
Sbjct: 125 KADPPPPKADPPPPKKADPPPP-KADPPPPKKADPPPPKKADPPPPK--ADPPPPKKADP 184

Query: 241 PPPQKVDPPPPKKADPPPP-KADPPPPKKVDPPPVVVPEPTP---VHIPTPVQPEPYPVN 300
           PPP K DPPPPKKADPPPP KADPPPPKK DPPP    +P P   V    P QPEP+PVN
Sbjct: 185 PPP-KADPPPPKKADPPPPKKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVN 244

Query: 301 MCVPVPGYPPGYPIGVCCRQCSEGRGGGPCYSGFGGPGPCCDGCASGRPIYDSYGGGRPC 357
           +CVPVPGYPP YPIG+CC QC EG+GGGPCYSGFG PGPCCDGCASGRPIYDSYGGGRPC
Sbjct: 245 ICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPC 304

[Close]

BLAST of HG10021661 vs. TAIR 10
Match: AT4G16380.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 132.9 bits (333), Expect = 5.1e-31
Identity = 125/305 (40.98%), Postives = 162/305 (53.11%), Query Frame = 0


Query: 61  QKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 120
           +KV +M LKVDL C +CYKKVKKVLCKFPQIRDQ++DEK N+VIIKVVCC+PE++ DK+C
Sbjct: 7   EKVTMMKLKVDLDCAKCYKKVKKVLCKFPQIRDQLFDEKSNIVIIKVVCCSPERIMDKLC 66

Query: 121 CKGCGVIKSIEIKDPEIPKPPPPKPADPPPPKKADPPPLKKADPPPPKKPDPPPPKKPDP 180
            KG G IK+IEI +P  PKPP P+P                    PP+KP    PK P+ 
Sbjct: 67  SKGGGSIKTIEIVEP--PKPPQPQPQQ------------------PPQKPKDAQPKAPEK 126

Query: 181 PPPQKVDPPPPKKADPPPPKKTDPPPPKKAADPPPPKKAD-PPPPQKVDPPPPKKADPPP 240
           P             +P  PK+     P+K  +P  PK+ + P  P+K   P P  A  P 
Sbjct: 127 P------------KEPEKPKQ-----PEKLKEPEKPKQPEKPKEPEKTKQPAPAPAPAPA 186

Query: 241 PKADPPPPKKVDPPPVVVPEPTPVHIPTPVQPEPYPVNMCVPVPGYPPGYPIGVCCRQCS 300
           P A P             P P P   P P QP P P      +P  P G P  +CC    
Sbjct: 187 PAAKP------------APAPAPAPAPAPKQPGPPP----QAIPMMPQGQP-AMCCGPYY 246

Query: 301 EGRGGGPCYSGFGGPGPCCDGCASGRPIYDSYGGG--------RPCYVSHCEYLNEENAS 357
           +G  GGP ++G+G P    +    GRP+Y+S+GGG        R C+V+ C+Y +EEN  
Sbjct: 247 DGY-GGPAFNGYGMPPQPYE--CYGRPVYESWGGGCPPPPPAYRQCHVTRCDYFSEENPQ 254

[Close]

BLAST of HG10021661 vs. TAIR 10
Match: AT4G16380.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 2.5e-17
Identity = 102/276 (36.96%), Postives = 137/276 (49.64%), Query Frame = 0


Query: 90  QIRDQIYDEKQNLVIIKVVCCNPEKLRDKICCKGCGVIKSIEIKDPEIPKPPPPKPADPP 149
           +IRDQ++DEK N+VIIKVVCC+PE++ DK+C KG G IK+IEI +P  PKPP P+P    
Sbjct: 15  EIRDQLFDEKSNIVIIKVVCCSPERIMDKLCSKGGGSIKTIEIVEP--PKPPQPQPQQ-- 74

Query: 150 PPKKADPPPLKKADPPPPKKPDPPPPKKPDPPPPQKVDPPPPKKADPPPPKKTDPPPPKK 209
                           PP+KP    PK P+ P             +P  PK+     P+K
Sbjct: 75  ----------------PPQKPKDAQPKAPEKP------------KEPEKPKQ-----PEK 134

Query: 210 AADPPPPKKAD-PPPPQKVDPPPPKKADPPPPKADPPPPKKVDPPPVVVPEPTPVHIPTP 269
             +P  PK+ + P  P+K   P P  A  P P A P             P P P   P P
Sbjct: 135 LKEPEKPKQPEKPKEPEKTKQPAPAPAPAPAPAAKP------------APAPAPAPAPAP 194

Query: 270 VQPEPYPVNMCVPVPGYPPGYPIGVCCRQCSEGRGGGPCYSGFGGPGPCCDGCASGRPIY 329
            QP P P      +P  P G P  +CC    +G  GGP ++G+G P    +    GRP+Y
Sbjct: 195 KQPGPPP----QAIPMMPQGQP-AMCCGPYYDGY-GGPAFNGYGMPPQPYE--CYGRPVY 233

Query: 330 DSYGGG--------RPCYVSHCEYLNEENASGCIVM 357
           +S+GGG        R C+V+ C+Y +EEN   C +M
Sbjct: 255 ESWGGGCPPPPPAYRQCHVTRCDYFSEENPQSCSIM 233

[Close]

BLAST of HG10021661 vs. TAIR 10
Match: AT1G44191.1 (ECA1 gametogenesis related family protein )

HSP 1 Score: 47.0 bits (110), Expect = 3.7e-05
Identity = 74/146 (50.68%), Postives = 81/146 (55.48%), Query Frame = 0


Query: 133 KDPEIPKPPPP---KPADPPPPKKADPPPLKKADPPPPKKPDPPPPKKPDPPPPQKVDPP 192
           K P  PKP PP       PPPPK + PPP+ K  PPPPK   PPP  K  PPPP+   PP
Sbjct: 99  KSPPSPKPSPPPRTPKKSPPPPKPSSPPPIPKKSPPPPKPSSPPPTPKKSPPPPKPSSPP 158

Query: 193 PPKKADPPPPKKTDPPPPKKAADPPPPKKADPPPPQKVDPPPPKKADPPPPKADPPPPKK 252
           P  K  PPPPK + P PPK +  PP PKK+ P PP+   PPP  K  PPPPK  P PPK 
Sbjct: 159 PSPKKSPPPPKPS-PSPPKPSTPPPTPKKSPPSPPKPSSPPPSPKKSPPPPKPSPSPPKP 218

Query: 253 VDPPPVVVPEPTPVHIPTPVQPEPYP 276
             PPP     P P   P P QP P P
Sbjct: 219 STPPPTPKKSPPP---PKPSQPPPKP 240

The following BLAST results are available for this feature:

BLAST of HG10021661 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139513.2	4.4e-133	89.86	circumsporozoite protein [Cucumis sativus] >KAE8652830.1 hypothetical protein Cs...	[more]
XP_008464282.1	4.0e-126	87.38	PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo]	[more]
XP_022927590.1	5.4e-115	83.61	leucine-rich repeat extensin-like protein 3 isoform X5 [Cucurbita moschata]	[more]
XP_022927593.1	9.2e-115	83.95	leucine-rich repeat extensin-like protein 3 isoform X8 [Cucurbita moschata]	[more]
XP_022927588.1	6.0e-114	80.25	leucine-rich repeat extensin-like protein 3 isoform X3 [Cucurbita moschata]	[more]

BLAST of HG10021661 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P23093	8.6e-07	53.21	Circumsporozoite protein OS=Plasmodium berghei (strain Anka) OX=5823 PE=3 SV=1	[more]

BLAST of HG10021661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTA1	7.6e-131	88.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172590 PE=4 SV=1	[more]
A0A1S3CL41	1.9e-126	87.38	leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103502...	[more]
A0A6J1EPE4	2.6e-115	83.61	leucine-rich repeat extensin-like protein 3 isoform X5 OS=Cucurbita moschata OX=...	[more]
A0A6J1ELF4	4.4e-115	83.95	leucine-rich repeat extensin-like protein 3 isoform X8 OS=Cucurbita moschata OX=...	[more]
A0A6J1ELE8	2.9e-114	80.25	leucine-rich repeat extensin-like protein 3 isoform X3 OS=Cucurbita moschata OX=...	[more]

BLAST of HG10021661 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16380.1	5.1e-31	40.98	Heavy metal transport/detoxification superfamily protein	[more]
AT4G16380.2	2.5e-17	36.96	Heavy metal transport/detoxification superfamily protein	[more]
AT1G44191.1	3.7e-05	50.68	ECA1 gametogenesis related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..175
None	No IPR available	PANTHER	PTHR47488:SF16	HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN	coord: 208..356 coord: 60..221
IPR044169	Protein PYRICULARIA ORYZAE RESISTANCE 21	PANTHER	PTHR47488	HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN	coord: 208..356 coord: 60..221
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 65..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021661.1	HG10021661.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900150	regulation of defense response to fungus
molecular_function	GO:0046872	metal ion binding