HG10021102 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021102
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Cysteine-rich receptor-kinase-like protein
Location	Chr05: 5387871 .. 5388205 (+)
RNA-Seq Expression	HG10021102
Synteny	HG10021102

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCCAGAATATGCAATGCATGGAAACTTCTCGATCAAATCTGATGTGTATAGCTTTGGAGTGTTGATGTTGGAGATTATATATGGAAAGAAAAACTACACGTTTTATTTGTCAGGTCTTGCCGAAGACATCATAACCTACGTAAGTCAATTAGGTGAAGATTTTCAATTCTTTACTTTATAACAATTGAATTAAAACCTATACCAAAACAATGCATTATTGAAACCTACTACTTTTTGTAGTCAGGCTTGGAAGCTATGGAAGGATGGAACTCCATTAGATCTACTCGACTCGAGTTTGAAAGACAAGTACTCAAGAAATATGGTAATTAG

mRNA sequence

ATGTCTCCAGAATATGCAATGCATGGAAACTTCTCGATCAAATCTGATGTGTATAGCTTTGGAGTGTTGATGTTGGAGATTATATATGGAAAGAAAAACTACACGTTTTATTTGTCAGGTCTTGCCGAAGACATCATAACCTACTCAGGCTTGGAAGCTATGGAAGGATGGAACTCCATTAGATCTACTCGACTCGAGTTTGAAAGACAAGTACTCAAGAAATATGGTAATTAG

Coding sequence (CDS)

ATGTCTCCAGAATATGCAATGCATGGAAACTTCTCGATCAAATCTGATGTGTATAGCTTTGGAGTGTTGATGTTGGAGATTATATATGGAAAGAAAAACTACACGTTTTATTTGTCAGGTCTTGCCGAAGACATCATAACCTACTCAGGCTTGGAAGCTATGGAAGGATGGAACTCCATTAGATCTACTCGACTCGAGTTTGAAAGACAAGTACTCAAGAAATATGGTAATTAG

Protein sequence

MSPEYAMHGNFSIKSDVYSFGVLMLEIIYGKKNYTFYLSGLAEDIITYSGLEAMEGWNSIRSTRLEFERQVLKKYGN

Homology

[Close]

BLAST of HG10021102 vs. NCBI nr
Match: XP_022139943.1 (putative receptor-like protein kinase At4g00960 [Momordica charantia])

HSP 1 Score: 90.9 bits (224), Expect = 5.2e-15
Identity = 43/49 (87.76%), Postives = 47/49 (95.92%), Query Frame = 0


Query: 1   MSPEYAMHGNFSIKSDVYSFGVLMLEIIYGKKNYTFYLSGLAEDIITYS 50
           MSPEYAMHGNFS+KSDVYSFGVL+LEII GKKN TFYLSGLAEDI+TY+
Sbjct: 498 MSPEYAMHGNFSMKSDVYSFGVLVLEIISGKKNNTFYLSGLAEDILTYA 546

[Close]

BLAST of HG10021102 vs. NCBI nr
Match: XP_022139941.1 (cysteine-rich receptor-like protein kinase 10 [Momordica charantia])

HSP 1 Score: 88.6 bits (218), Expect = 2.6e-14
Identity = 42/49 (85.71%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 1   MSPEYAMHGNFSIKSDVYSFGVLMLEIIYGKKNYTFYLSGLAEDIITYS 50
           MSPEYAMHGNFSIKSDVYSFGVL+LEI+ GKKN TFYLS LAEDI+TY+
Sbjct: 515 MSPEYAMHGNFSIKSDVYSFGVLVLEILSGKKNNTFYLSDLAEDILTYA 563

[Close]

BLAST of HG10021102 vs. NCBI nr
Match: XP_008446411.2 (PREDICTED: cysteine-rich receptor-like protein kinase 10 [Cucumis melo])

HSP 1 Score: 86.7 bits (213), Expect = 9.8e-14
Identity = 40/49 (81.63%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 1    MSPEYAMHGNFSIKSDVYSFGVLMLEIIYGKKNYTFYLSGLAEDIITYS 50
            MSPEYAMHGNFS+KSD+YSFGVL+LEII G+KN TFYLS LAEDI+TY+
Sbjct: 1068 MSPEYAMHGNFSMKSDIYSFGVLVLEIISGRKNNTFYLSDLAEDILTYA 1116

[Close]

BLAST of HG10021102 vs. NCBI nr
Match: KAA0056887.1 (cysteine-rich receptor-like protein kinase 10 [Cucumis melo var. makuwa])

HSP 1 Score: 86.7 bits (213), Expect = 9.8e-14
Identity = 40/49 (81.63%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 1    MSPEYAMHGNFSIKSDVYSFGVLMLEIIYGKKNYTFYLSGLAEDIITYS 50
            MSPEYAMHGNFS+KSD+YSFGVL+LEII G+KN TFYLS LAEDI+TY+
Sbjct: 1118 MSPEYAMHGNFSMKSDIYSFGVLVLEIISGRKNNTFYLSDLAEDILTYA 1166

[Close]

BLAST of HG10021102 vs. NCBI nr
Match: TYJ99390.1 (cysteine-rich receptor-like protein kinase 10 [Cucumis melo var. makuwa])

HSP 1 Score: 86.7 bits (213), Expect = 9.8e-14
Identity = 40/49 (81.63%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 1    MSPEYAMHGNFSIKSDVYSFGVLMLEIIYGKKNYTFYLSGLAEDIITYS 50
            MSPEYAMHGNFS+KSD+YSFGVL+LEII G+KN TFYLS LAEDI+TY+
Sbjct: 1150 MSPEYAMHGNFSMKSDIYSFGVLVLEIISGRKNNTFYLSDLAEDILTYA 1198

[Close]

BLAST of HG10021102 vs. ExPASy Swiss-Prot
Match: Q8GYA4 (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3)

HSP 1 Score: 72.8 bits (177), Expect = 1.9e-12
Identity = 33/49 (67.35%), Postives = 42/49 (85.71%), Query Frame = 0


Query: 1   MSPEYAMHGNFSIKSDVYSFGVLMLEIIYGKKNYTFYLSGLAEDIITYS 50
           MSPEYAMHG +S+KSDVYSFGVL+LEII GKKN +FY +  A D+++Y+
Sbjct: 517 MSPEYAMHGQYSMKSDVYSFGVLVLEIISGKKNSSFYQTDGAHDLVSYA 565

[Close]

BLAST of HG10021102 vs. ExPASy Swiss-Prot
Match: Q8W4G6 (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana OX=3702 GN=CRK15 PE=2 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 5.6e-12
Identity = 32/49 (65.31%), Postives = 42/49 (85.71%), Query Frame = 0


Query: 1   MSPEYAMHGNFSIKSDVYSFGVLMLEIIYGKKNYTFYLSGLAEDIITYS 50
           M+PEYA+HG FS+KSDVYSFGVL+LEII GKKN +FY +  A D++T++
Sbjct: 506 MAPEYAIHGQFSVKSDVYSFGVLVLEIISGKKNNSFYETDGAHDLVTHA 554

[Close]

BLAST of HG10021102 vs. ExPASy Swiss-Prot
Match: Q8L710 (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana OX=3702 GN=CRK17 PE=2 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 1.2e-11
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 1   MSPEYAMHGNFSIKSDVYSFGVLMLEIIYGKKNYTFY-LSGLAEDIITY 49
           MSPEY  HG FS+KSDVYSFGVL+LEII GKKN +FY + GL  +++TY
Sbjct: 528 MSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTY 576

[Close]

BLAST of HG10021102 vs. ExPASy Swiss-Prot
Match: Q8RX80 (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana OX=3702 GN=CRK18 PE=2 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 1.2e-11
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 1   MSPEYAMHGNFSIKSDVYSFGVLMLEIIYGKKNYTFY-LSGLAEDIITY 49
           MSPEY  HG FS+KSDVYSFGVL+LEII GKKN +FY + GL  +++TY
Sbjct: 508 MSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTY 556

[Close]

BLAST of HG10021102 vs. ExPASy Swiss-Prot
Match: Q9M0X5 (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.8e-11
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 0


Query: 1   MSPEYAMHGNFSIKSDVYSFGVLMLEIIYGKKNYTFYLSGLAEDIITY 49
           MSPEYA+HG +S+KSDVYSFGVL+LE+I GKKN +FY      D++TY
Sbjct: 516 MSPEYAIHGKYSVKSDVYSFGVLVLELITGKKNSSFYEEDGLGDLVTY 563

[Close]

BLAST of HG10021102 vs. ExPASy TrEMBL
Match: A0A6J1CGV0 (putative receptor-like protein kinase At4g00960 OS=Momordica charantia OX=3673 GN=LOC111010733 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.5e-15
Identity = 43/49 (87.76%), Postives = 47/49 (95.92%), Query Frame = 0


Query: 1   MSPEYAMHGNFSIKSDVYSFGVLMLEIIYGKKNYTFYLSGLAEDIITYS 50
           MSPEYAMHGNFS+KSDVYSFGVL+LEII GKKN TFYLSGLAEDI+TY+
Sbjct: 498 MSPEYAMHGNFSMKSDVYSFGVLVLEIISGKKNNTFYLSGLAEDILTYA 546

[Close]

BLAST of HG10021102 vs. ExPASy TrEMBL
Match: A0A6J1CE69 (cysteine-rich receptor-like protein kinase 10 OS=Momordica charantia OX=3673 GN=LOC111010730 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.3e-14
Identity = 42/49 (85.71%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 1   MSPEYAMHGNFSIKSDVYSFGVLMLEIIYGKKNYTFYLSGLAEDIITYS 50
           MSPEYAMHGNFSIKSDVYSFGVL+LEI+ GKKN TFYLS LAEDI+TY+
Sbjct: 515 MSPEYAMHGNFSIKSDVYSFGVLVLEILSGKKNNTFYLSDLAEDILTYA 563

[Close]

BLAST of HG10021102 vs. ExPASy TrEMBL
Match: A0A5A7UQH5 (Cysteine-rich receptor-like protein kinase 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G00560 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.8e-14
Identity = 40/49 (81.63%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 1    MSPEYAMHGNFSIKSDVYSFGVLMLEIIYGKKNYTFYLSGLAEDIITYS 50
            MSPEYAMHGNFS+KSD+YSFGVL+LEII G+KN TFYLS LAEDI+TY+
Sbjct: 1118 MSPEYAMHGNFSMKSDIYSFGVLVLEIISGRKNNTFYLSDLAEDILTYA 1166

[Close]

BLAST of HG10021102 vs. ExPASy TrEMBL
Match: A0A5D3BHV8 (Cysteine-rich receptor-like protein kinase 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G006080 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.8e-14
Identity = 40/49 (81.63%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 1    MSPEYAMHGNFSIKSDVYSFGVLMLEIIYGKKNYTFYLSGLAEDIITYS 50
            MSPEYAMHGNFS+KSD+YSFGVL+LEII G+KN TFYLS LAEDI+TY+
Sbjct: 1150 MSPEYAMHGNFSMKSDIYSFGVLVLEIISGRKNNTFYLSDLAEDILTYA 1198

[Close]

BLAST of HG10021102 vs. ExPASy TrEMBL
Match: A0A1S3BF04 (cysteine-rich receptor-like protein kinase 10 OS=Cucumis melo OX=3656 GN=LOC103489161 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.8e-14
Identity = 40/49 (81.63%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 1    MSPEYAMHGNFSIKSDVYSFGVLMLEIIYGKKNYTFYLSGLAEDIITYS 50
            MSPEYAMHGNFS+KSD+YSFGVL+LEII G+KN TFYLS LAEDI+TY+
Sbjct: 1068 MSPEYAMHGNFSMKSDIYSFGVLVLEIISGRKNNTFYLSDLAEDILTYA 1116

[Close]

BLAST of HG10021102 vs. TAIR 10
Match: AT4G23180.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 10 )

HSP 1 Score: 72.8 bits (177), Expect = 1.4e-13
Identity = 33/49 (67.35%), Postives = 42/49 (85.71%), Query Frame = 0


Query: 1   MSPEYAMHGNFSIKSDVYSFGVLMLEIIYGKKNYTFYLSGLAEDIITYS 50
           MSPEYAMHG +S+KSDVYSFGVL+LEII GKKN +FY +  A D+++Y+
Sbjct: 517 MSPEYAMHGQYSMKSDVYSFGVLVLEIISGKKNSSFYQTDGAHDLVSYA 565

[Close]

BLAST of HG10021102 vs. TAIR 10
Match: AT4G23230.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 15 )

HSP 1 Score: 71.2 bits (173), Expect = 4.0e-13
Identity = 32/49 (65.31%), Postives = 42/49 (85.71%), Query Frame = 0


Query: 1   MSPEYAMHGNFSIKSDVYSFGVLMLEIIYGKKNYTFYLSGLAEDIITYS 50
           M+PEYA+HG FS+KSDVYSFGVL+LEII GKKN +FY +  A D++T++
Sbjct: 386 MAPEYAIHGQFSVKSDVYSFGVLVLEIISGKKNNSFYETDGAHDLVTHA 434

[Close]

BLAST of HG10021102 vs. TAIR 10
Match: AT4G23250.1 (kinases;protein kinases )

HSP 1 Score: 70.1 bits (170), Expect = 8.9e-13
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 1   MSPEYAMHGNFSIKSDVYSFGVLMLEIIYGKKNYTFY-LSGLAEDIITY 49
           MSPEY  HG FS+KSDVYSFGVL+LEII GKKN +FY + GL  +++TY
Sbjct: 523 MSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTY 571

[Close]

BLAST of HG10021102 vs. TAIR 10
Match: AT4G23260.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 18 )

HSP 1 Score: 70.1 bits (170), Expect = 8.9e-13
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 1   MSPEYAMHGNFSIKSDVYSFGVLMLEIIYGKKNYTFY-LSGLAEDIITY 49
           MSPEY  HG FS+KSDVYSFGVL+LEII GKKN +FY + GL  +++TY
Sbjct: 508 MSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTY 556

[Close]

BLAST of HG10021102 vs. TAIR 10
Match: AT4G23260.2 (cysteine-rich RLK (RECEPTOR-like protein kinase) 18 )

HSP 1 Score: 70.1 bits (170), Expect = 8.9e-13
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 1   MSPEYAMHGNFSIKSDVYSFGVLMLEIIYGKKNYTFY-LSGLAEDIITY 49
           MSPEY  HG FS+KSDVYSFGVL+LEII GKKN +FY + GL  +++TY
Sbjct: 497 MSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTY 545

The following BLAST results are available for this feature:

BLAST of HG10021102 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139943.1	5.2e-15	87.76	putative receptor-like protein kinase At4g00960 [Momordica charantia]	[more]
XP_022139941.1	2.6e-14	85.71	cysteine-rich receptor-like protein kinase 10 [Momordica charantia]	[more]
XP_008446411.2	9.8e-14	81.63	PREDICTED: cysteine-rich receptor-like protein kinase 10 [Cucumis melo]	[more]
KAA0056887.1	9.8e-14	81.63	cysteine-rich receptor-like protein kinase 10 [Cucumis melo var. makuwa]	[more]
TYJ99390.1	9.8e-14	81.63	cysteine-rich receptor-like protein kinase 10 [Cucumis melo var. makuwa]	[more]

BLAST of HG10021102 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYA4	1.9e-12	67.35	Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q8W4G6	5.6e-12	65.31	Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q8L710	1.2e-11	67.35	Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q8RX80	1.2e-11	67.35	Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9M0X5	2.8e-11	64.58	Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of HG10021102 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CGV0	2.5e-15	87.76	putative receptor-like protein kinase At4g00960 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CE69	1.3e-14	85.71	cysteine-rich receptor-like protein kinase 10 OS=Momordica charantia OX=3673 GN=...	[more]
A0A5A7UQH5	4.8e-14	81.63	Cysteine-rich receptor-like protein kinase 10 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5D3BHV8	4.8e-14	81.63	Cysteine-rich receptor-like protein kinase 10 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3BF04	4.8e-14	81.63	cysteine-rich receptor-like protein kinase 10 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of HG10021102 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23180.1	1.4e-13	67.35	cysteine-rich RLK (RECEPTOR-like protein kinase) 10	[more]
AT4G23230.1	4.0e-13	65.31	cysteine-rich RLK (RECEPTOR-like protein kinase) 15	[more]
AT4G23250.1	8.9e-13	67.35	kinases;protein kinases	[more]
AT4G23260.1	8.9e-13	67.35	cysteine-rich RLK (RECEPTOR-like protein kinase) 18	[more]
AT4G23260.2	8.9e-13	67.35	cysteine-rich RLK (RECEPTOR-like protein kinase) 18	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain	PFAM	PF07714	PK_Tyr_Ser-Thr	coord: 1..35 e-value: 3.2E-8 score: 33.2
None	No IPR available	GENE3D	1.10.510.10	Transferase(Phosphotransferase) domain 1	coord: 1..74 e-value: 2.3E-10 score: 41.9
None	No IPR available	PANTHER	PTHR27002	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	coord: 1..49
None	No IPR available	PANTHER	PTHR27002:SF848	PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 1..49
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 1..35

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021102.1	HG10021102.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0004672	protein kinase activity