HG10021101 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021101
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Cysteine-rich receptor-kinase-like protein
Location	Chr05: 5387590 .. 5387760 (+)
RNA-Seq Expression	HG10021101
Synteny	HG10021101

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTATATTTACATGAAGATTCTCGACTTCGAGTTATTCATCGTGATCTTGAAGCTAGCAATGTCTTGTTAGATGAGGAAATGAATCCAAAGATTTCAGATTTTGGTATGGCAAGGATTATTCAAATTGATGAAACTCAAAGAAATACACGTCGAATTGCTGATACCTAG

mRNA sequence

ATGTTATATTTACATGAAGATTCTCGACTTCGAGTTATTCATCGTGATCTTGAAGCTAGCAATGTCTTGTTAGATGAGGAAATGAATCCAAAGATTTCAGATTTTGGTATGGCAAGGATTATTCAAATTGATGAAACTCAAAGAAATACACGTCGAATTGCTGATACCTAG

Coding sequence (CDS)

ATGTTATATTTACATGAAGATTCTCGACTTCGAGTTATTCATCGTGATCTTGAAGCTAGCAATGTCTTGTTAGATGAGGAAATGAATCCAAAGATTTCAGATTTTGGTATGGCAAGGATTATTCAAATTGATGAAACTCAAAGAAATACACGTCGAATTGCTGATACCTAG

Protein sequence

MLYLHEDSRLRVIHRDLEASNVLLDEEMNPKISDFGMARIIQIDETQRNTRRIADT

Homology

[Close]

BLAST of HG10021101 vs. NCBI nr
Match: XP_031745421.1 (putative receptor-like protein kinase At4g00960 [Cucumis sativus])

HSP 1 Score: 103.6 bits (257), Expect = 5.6e-19
Identity = 50/56 (89.29%), Postives = 55/56 (98.21%), Query Frame = 0


Query: 1   MLYLHEDSRLRVIHRDLEASNVLLDEEMNPKISDFGMARIIQIDETQRNTRRIADT 57
           MLYLHEDSRLR++HRDL+ASNVLLDEEM+PKISDFGMARIIQIDETQ+NTRRIA T
Sbjct: 454 MLYLHEDSRLRIVHRDLKASNVLLDEEMDPKISDFGMARIIQIDETQKNTRRIAGT 509

[Close]

BLAST of HG10021101 vs. NCBI nr
Match: XP_022139943.1 (putative receptor-like protein kinase At4g00960 [Momordica charantia])

HSP 1 Score: 99.8 bits (247), Expect = 8.2e-18
Identity = 47/56 (83.93%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 1   MLYLHEDSRLRVIHRDLEASNVLLDEEMNPKISDFGMARIIQIDETQRNTRRIADT 57
           +LYLHEDSRLR+IHRDL+ SN+LLDEEMNPK+SDFGMARII+IDETQRNT RIA T
Sbjct: 439 ILYLHEDSRLRIIHRDLKVSNILLDEEMNPKVSDFGMARIIRIDETQRNTNRIAGT 494

[Close]

BLAST of HG10021101 vs. NCBI nr
Match: XP_021726271.1 (putative receptor-like protein kinase At4g00960 isoform X2 [Chenopodium quinoa])

HSP 1 Score: 95.5 bits (236), Expect = 1.5e-16
Identity = 45/56 (80.36%), Postives = 52/56 (92.86%), Query Frame = 0


Query: 1   MLYLHEDSRLRVIHRDLEASNVLLDEEMNPKISDFGMARIIQIDETQRNTRRIADT 57
           +LYLHEDSRL++IHRDL+ASNVLLDE+MNPKISDFGMAR+ + DETQRNT RIA T
Sbjct: 406 LLYLHEDSRLKIIHRDLKASNVLLDEDMNPKISDFGMARLFKADETQRNTSRIAGT 461

[Close]

BLAST of HG10021101 vs. NCBI nr
Match: XP_021719582.1 (putative receptor-like protein kinase At4g00960 [Chenopodium quinoa])

HSP 1 Score: 95.5 bits (236), Expect = 1.5e-16
Identity = 45/56 (80.36%), Postives = 52/56 (92.86%), Query Frame = 0


Query: 1   MLYLHEDSRLRVIHRDLEASNVLLDEEMNPKISDFGMARIIQIDETQRNTRRIADT 57
           +LYLHEDSRL++IHRDL+ASNVLLDE+MNPKISDFGMAR+ + DETQRNT RIA T
Sbjct: 460 LLYLHEDSRLKIIHRDLKASNVLLDEDMNPKISDFGMARLFKADETQRNTSRIAGT 515

[Close]

BLAST of HG10021101 vs. NCBI nr
Match: XP_021726270.1 (putative receptor-like protein kinase At4g00960 isoform X1 [Chenopodium quinoa])

HSP 1 Score: 95.5 bits (236), Expect = 1.5e-16
Identity = 45/56 (80.36%), Postives = 52/56 (92.86%), Query Frame = 0


Query: 1   MLYLHEDSRLRVIHRDLEASNVLLDEEMNPKISDFGMARIIQIDETQRNTRRIADT 57
           +LYLHEDSRL++IHRDL+ASNVLLDE+MNPKISDFGMAR+ + DETQRNT RIA T
Sbjct: 460 LLYLHEDSRLKIIHRDLKASNVLLDEDMNPKISDFGMARLFKADETQRNTSRIAGT 515

[Close]

BLAST of HG10021101 vs. ExPASy Swiss-Prot
Match: Q9LDQ3 (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana OX=3702 GN=CRK35 PE=3 SV=3)

HSP 1 Score: 87.4 bits (215), Expect = 5.5e-17
Identity = 40/56 (71.43%), Postives = 50/56 (89.29%), Query Frame = 0


Query: 1   MLYLHEDSRLRVIHRDLEASNVLLDEEMNPKISDFGMARIIQIDETQRNTRRIADT 57
           +LYLH+DSRL +IHRDL+ASN+LLD +MNPKI+DFGMARI  +D++Q NTRRIA T
Sbjct: 455 ILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGVDQSQANTRRIAGT 510

[Close]

BLAST of HG10021101 vs. ExPASy Swiss-Prot
Match: Q8L7G3 (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=CRK7 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.7e-16
Identity = 39/56 (69.64%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 1   MLYLHEDSRLRVIHRDLEASNVLLDEEMNPKISDFGMARIIQIDETQRNTRRIADT 57
           +LYLH+DSRL +IHRDL+ASN+LLD +MNPKI+DFGMARI  +D+TQ+NT RI  T
Sbjct: 446 ILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGMDQTQQNTSRIVGT 501

[Close]

BLAST of HG10021101 vs. ExPASy Swiss-Prot
Match: Q9M0X5 (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.6e-16
Identity = 39/56 (69.64%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 1   MLYLHEDSRLRVIHRDLEASNVLLDEEMNPKISDFGMARIIQIDETQRNTRRIADT 57
           +LYLH DSRL +IHRDL+ASN+LLD +M+PKISDFGMARI  +D+TQ NT+RI  T
Sbjct: 457 ILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGMARIFGVDQTQANTKRIVGT 512

[Close]

BLAST of HG10021101 vs. ExPASy Swiss-Prot
Match: P0DH86 (G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana OX=3702 GN=SRK PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 4.6e-16
Identity = 38/56 (67.86%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 1   MLYLHEDSRLRVIHRDLEASNVLLDEEMNPKISDFGMARIIQIDETQRNTRRIADT 57
           +LYLH+DSR ++IHRDL+ASNVLLD+ M PKISDFGMARI + DET+ NTR++  T
Sbjct: 635 LLYLHQDSRFKIIHRDLKASNVLLDKNMTPKISDFGMARIFERDETEANTRKVVGT 690

[Close]

BLAST of HG10021101 vs. ExPASy Swiss-Prot
Match: Q8GYA4 (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3)

HSP 1 Score: 84.0 bits (206), Expect = 6.1e-16
Identity = 38/56 (67.86%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 1   MLYLHEDSRLRVIHRDLEASNVLLDEEMNPKISDFGMARIIQIDETQRNTRRIADT 57
           +LYLH+DSRL +IHRDL+ASN+LLD +MNPKI+DFGMARI  +D+T+ NT RI  T
Sbjct: 458 ILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEENTSRIVGT 513

[Close]

BLAST of HG10021101 vs. ExPASy TrEMBL
Match: A0A6J1CGV0 (putative receptor-like protein kinase At4g00960 OS=Momordica charantia OX=3673 GN=LOC111010733 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.9e-18
Identity = 47/56 (83.93%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 1   MLYLHEDSRLRVIHRDLEASNVLLDEEMNPKISDFGMARIIQIDETQRNTRRIADT 57
           +LYLHEDSRLR+IHRDL+ SN+LLDEEMNPK+SDFGMARII+IDETQRNT RIA T
Sbjct: 439 ILYLHEDSRLRIIHRDLKVSNILLDEEMNPKVSDFGMARIIRIDETQRNTNRIAGT 494

[Close]

BLAST of HG10021101 vs. ExPASy TrEMBL
Match: A0A803LKY9 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 7.4e-17
Identity = 45/56 (80.36%), Postives = 52/56 (92.86%), Query Frame = 0


Query: 1   MLYLHEDSRLRVIHRDLEASNVLLDEEMNPKISDFGMARIIQIDETQRNTRRIADT 57
           +LYLHEDSRL++IHRDL+ASNVLLDE+MNPKISDFGMAR+ + DETQRNT RIA T
Sbjct: 415 LLYLHEDSRLKIIHRDLKASNVLLDEDMNPKISDFGMARLFKADETQRNTSRIAGT 470

[Close]

BLAST of HG10021101 vs. ExPASy TrEMBL
Match: A0A6J1CKQ2 (cysteine-rich receptor-like protein kinase 10 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012334 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-16
Identity = 43/56 (76.79%), Postives = 51/56 (91.07%), Query Frame = 0


Query: 1   MLYLHEDSRLRVIHRDLEASNVLLDEEMNPKISDFGMARIIQIDETQRNTRRIADT 57
           MLYLHEDSRLR++HRDL+ASN+LLDEEMNPKI+DFGMAR+ ++DETQ NT RI  T
Sbjct: 492 MLYLHEDSRLRIVHRDLKASNILLDEEMNPKIADFGMARLFEVDETQGNTSRIVGT 547

[Close]

BLAST of HG10021101 vs. ExPASy TrEMBL
Match: A0A6J1CK26 (putative receptor-like protein kinase At4g00960 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012334 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-16
Identity = 43/56 (76.79%), Postives = 51/56 (91.07%), Query Frame = 0


Query: 1   MLYLHEDSRLRVIHRDLEASNVLLDEEMNPKISDFGMARIIQIDETQRNTRRIADT 57
           MLYLHEDSRLR++HRDL+ASN+LLDEEMNPKI+DFGMAR+ ++DETQ NT RI  T
Sbjct: 454 MLYLHEDSRLRIVHRDLKASNILLDEEMNPKIADFGMARLFEVDETQGNTSRIVGT 509

[Close]

BLAST of HG10021101 vs. ExPASy TrEMBL
Match: A0A0R0END7 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_20G138900 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.7e-16
Identity = 44/56 (78.57%), Postives = 51/56 (91.07%), Query Frame = 0


Query: 1   MLYLHEDSRLRVIHRDLEASNVLLDEEMNPKISDFGMARIIQIDETQRNTRRIADT 57
           +LYLHEDSRLR+IHRDL+ASN+LLDEEMNPKISDFGMAR++ +DETQ NT RI  T
Sbjct: 395 ILYLHEDSRLRIIHRDLKASNILLDEEMNPKISDFGMARLVHMDETQGNTSRIVGT 450

[Close]

BLAST of HG10021101 vs. TAIR 10
Match: AT4G11530.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 34 )

HSP 1 Score: 87.4 bits (215), Expect = 3.9e-18
Identity = 40/56 (71.43%), Postives = 50/56 (89.29%), Query Frame = 0


Query: 1   MLYLHEDSRLRVIHRDLEASNVLLDEEMNPKISDFGMARIIQIDETQRNTRRIADT 57
           +LYLH+DSRL +IHRDL+ASN+LLD +MNPKI+DFGMARI  +D++Q NTRRIA T
Sbjct: 455 ILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGVDQSQANTRRIAGT 510

[Close]

BLAST of HG10021101 vs. TAIR 10
Match: AT4G23150.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 7 )

HSP 1 Score: 85.1 bits (209), Expect = 1.9e-17
Identity = 39/56 (69.64%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 1   MLYLHEDSRLRVIHRDLEASNVLLDEEMNPKISDFGMARIIQIDETQRNTRRIADT 57
           +LYLH+DSRL +IHRDL+ASN+LLD +MNPKI+DFGMARI  +D+TQ+NT RI  T
Sbjct: 446 ILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGMDQTQQNTSRIVGT 501

[Close]

BLAST of HG10021101 vs. TAIR 10
Match: AT4G05200.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 25 )

HSP 1 Score: 84.7 bits (208), Expect = 2.5e-17
Identity = 39/56 (69.64%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 1   MLYLHEDSRLRVIHRDLEASNVLLDEEMNPKISDFGMARIIQIDETQRNTRRIADT 57
           +LYLH DSRL +IHRDL+ASN+LLD +M+PKISDFGMARI  +D+TQ NT+RI  T
Sbjct: 457 ILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGMARIFGVDQTQANTKRIVGT 512

[Close]

BLAST of HG10021101 vs. TAIR 10
Match: AT4G03230.1 (S-locus lectin protein kinase family protein )

HSP 1 Score: 84.0 bits (206), Expect = 4.3e-17
Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 0


Query: 1   MLYLHEDSRLRVIHRDLEASNVLLDEEMNPKISDFGMARIIQIDETQRNTRRIADT 57
           +LYLH+DSRLR+IHRDL+ SN+LLDEEMNPKISDFG+ARI    ET  NT R+  T
Sbjct: 800 LLYLHQDSRLRIIHRDLKTSNILLDEEMNPKISDFGLARIFGGSETSANTNRVVGT 855

[Close]

BLAST of HG10021101 vs. TAIR 10
Match: AT4G23180.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 10 )

HSP 1 Score: 84.0 bits (206), Expect = 4.3e-17
Identity = 38/56 (67.86%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 1   MLYLHEDSRLRVIHRDLEASNVLLDEEMNPKISDFGMARIIQIDETQRNTRRIADT 57
           +LYLH+DSRL +IHRDL+ASN+LLD +MNPKI+DFGMARI  +D+T+ NT RI  T
Sbjct: 458 ILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEENTSRIVGT 513

The following BLAST results are available for this feature:

BLAST of HG10021101 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031745421.1	5.6e-19	89.29	putative receptor-like protein kinase At4g00960 [Cucumis sativus]	[more]
XP_022139943.1	8.2e-18	83.93	putative receptor-like protein kinase At4g00960 [Momordica charantia]	[more]
XP_021726271.1	1.5e-16	80.36	putative receptor-like protein kinase At4g00960 isoform X2 [Chenopodium quinoa]	[more]
XP_021719582.1	1.5e-16	80.36	putative receptor-like protein kinase At4g00960 [Chenopodium quinoa]	[more]
XP_021726270.1	1.5e-16	80.36	putative receptor-like protein kinase At4g00960 isoform X1 [Chenopodium quinoa]	[more]

BLAST of HG10021101 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDQ3	5.5e-17	71.43	Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana O...	[more]
Q8L7G3	2.7e-16	69.64	Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9M0X5	3.6e-16	69.64	Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN...	[more]
P0DH86	4.6e-16	67.86	G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis...	[more]
Q8GYA4	6.1e-16	67.86	Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of HG10021101 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CGV0	3.9e-18	83.93	putative receptor-like protein kinase At4g00960 OS=Momordica charantia OX=3673 G...	[more]
A0A803LKY9	7.4e-17	80.36	Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1	[more]
A0A6J1CKQ2	1.3e-16	76.79	cysteine-rich receptor-like protein kinase 10 isoform X1 OS=Momordica charantia ...	[more]
A0A6J1CK26	1.3e-16	76.79	putative receptor-like protein kinase At4g00960 isoform X2 OS=Momordica charanti...	[more]
A0A0R0END7	1.7e-16	78.57	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_20G138900 PE=4 SV=1	[more]

BLAST of HG10021101 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G11530.1	3.9e-18	71.43	cysteine-rich RLK (RECEPTOR-like protein kinase) 34	[more]
AT4G23150.1	1.9e-17	69.64	cysteine-rich RLK (RECEPTOR-like protein kinase) 7	[more]
AT4G05200.1	2.5e-17	69.64	cysteine-rich RLK (RECEPTOR-like protein kinase) 25	[more]
AT4G03230.1	4.3e-17	69.64	S-locus lectin protein kinase family protein	[more]
AT4G23180.1	4.3e-17	67.86	cysteine-rich RLK (RECEPTOR-like protein kinase) 10	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain	PFAM	PF07714	PK_Tyr_Ser-Thr	coord: 1..50 e-value: 7.1E-11 score: 41.9
None	No IPR available	GENE3D	1.10.510.10	Transferase(Phosphotransferase) domain 1	coord: 1..56 e-value: 4.0E-16 score: 60.8
None	No IPR available	PANTHER	PTHR27002:SF352	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13	coord: 1..56
None	No IPR available	PANTHER	PTHR27002	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	coord: 1..56
IPR000719	Protein kinase domain	PROSITE	PS50011	PROTEIN_KINASE_DOM	coord: 1..56 score: 16.089453
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 1..48

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021101.1	HG10021101.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0004672	protein kinase activity