HG10020568 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020568
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RING/FYVE/PHD zinc finger superfamily protein
Location	Chr05: 627588 .. 628388 (-)
RNA-Seq Expression	HG10020568
Synteny	HG10020568

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCGGCAGAACGCCACTTTCTTGAGGCAGAATACGATGAATATGCCGATGCCAGTGCGAACGGAACGGCATTTTGTCGATCTGCTGCTCTGATTGTGAGACTCTGTCTTTCTTGTTAGATGCTGAATTTTGTTAATCCGAAGTTAGTTGGAGTCTTTCAACATCAAGAAGTTCTGTAGCTTTATTCGATTTCTTAATATCTCTCTCAAAATATTATTTTCTGTTAAGATTATAATAAAACATCTCTTTTTTTCGCACCATAATGTTGATTATTACTGTTGCTTTGCCACAGTTGTTGGCTCTTTTACTGTTGAGGCACGCTCTATACCTTACAAACGGTGATGGAGAAGATGATGCATACACTTTCTTCTCGGTAAGTAAGACATTGAAATCCCCCCCCCCCCCCCCCCCCAAATACTATTATGTTTGTGTACTGGTTATTGTTAACTTTTATGTACATTGACAGCTTTTATTGCTGCGAGCTGCTGGGTTTCTTCTTCCCTGCTACATAATGGCATGGGCCATCAGCATACTACAGCGTCGAAGACAAAGACAGGTGTGTACTAAAGAGCTGAATTTATGCTTCACATTTGCAAAATTTGAGTAATCTCCTGGTTTTAATCTTTATGCAAAACCTGAATTTATTGTTGCTTGATCTTATACTTCTCTTACAGGAAGCTGCAGCGCTTGCAGCAACTGAAGTTGCATTTATGCTGCAGGCAGCACAAGGTCAGAGCCTTCAGTTTACCATTGCTCCAGGGCCCGTGGTTACTCCTCATCAAGAGCCACTCCAATAA

mRNA sequence

ATGGCAGCGGCAGAACGCCACTTTCTTGAGGCAGAATACGATGAATATGCCGATGCCAGTGCGAACGGAACGGCATTTTGTCGATCTGCTGCTCTGATTTTGTTGGCTCTTTTACTGTTGAGGCACGCTCTATACCTTACAAACGGTGATGGAGAAGATGATGCATACACTTTCTTCTCGCTTTTATTGCTGCGAGCTGCTGGGTTTCTTCTTCCCTGCTACATAATGGCATGGGCCATCAGCATACTACAGCGTCGAAGACAAAGACAGGAAGCTGCAGCGCTTGCAGCAACTGAAGTTGCATTTATGCTGCAGGCAGCACAAGGTCAGAGCCTTCAGTTTACCATTGCTCCAGGGCCCGTGGTTACTCCTCATCAAGAGCCACTCCAATAA

Coding sequence (CDS)

ATGGCAGCGGCAGAACGCCACTTTCTTGAGGCAGAATACGATGAATATGCCGATGCCAGTGCGAACGGAACGGCATTTTGTCGATCTGCTGCTCTGATTTTGTTGGCTCTTTTACTGTTGAGGCACGCTCTATACCTTACAAACGGTGATGGAGAAGATGATGCATACACTTTCTTCTCGCTTTTATTGCTGCGAGCTGCTGGGTTTCTTCTTCCCTGCTACATAATGGCATGGGCCATCAGCATACTACAGCGTCGAAGACAAAGACAGGAAGCTGCAGCGCTTGCAGCAACTGAAGTTGCATTTATGCTGCAGGCAGCACAAGGTCAGAGCCTTCAGTTTACCATTGCTCCAGGGCCCGTGGTTACTCCTCATCAAGAGCCACTCCAATAA

Protein sequence

MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFSLLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGPVVTPHQEPLQ

Homology

[Close]

BLAST of HG10020568 vs. NCBI nr
Match: XP_038895194.1 (uncharacterized protein LOC120083491 [Benincasa hispida] >XP_038895195.1 uncharacterized protein LOC120083491 [Benincasa hispida] >XP_038895196.1 uncharacterized protein LOC120083491 [Benincasa hispida])

HSP 1 Score: 249.2 bits (635), Expect = 1.9e-62
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS 60
           MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS
Sbjct: 158 MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS 217

Query: 61  LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGP 120
           LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGP
Sbjct: 218 LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGP 277

Query: 121 VVTPHQEPLQ 131
           VVTPHQEPLQ
Sbjct: 278 VVTPHQEPLQ 287

[Close]

BLAST of HG10020568 vs. NCBI nr
Match: XP_004137411.1 (uncharacterized protein LOC101217964 [Cucumis sativus] >KGN64004.1 hypothetical protein Csa_013088 [Cucumis sativus])

HSP 1 Score: 249.2 bits (635), Expect = 1.9e-62
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS 60
           MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS
Sbjct: 158 MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS 217

Query: 61  LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGP 120
           LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGP
Sbjct: 218 LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGP 277

Query: 121 VVTPHQEPLQ 131
           VVTPHQEPLQ
Sbjct: 278 VVTPHQEPLQ 287

[Close]

BLAST of HG10020568 vs. NCBI nr
Match: XP_022997977.1 (uncharacterized protein LOC111492770 [Cucurbita maxima] >XP_022997978.1 uncharacterized protein LOC111492770 [Cucurbita maxima] >XP_022997979.1 uncharacterized protein LOC111492770 [Cucurbita maxima])

HSP 1 Score: 248.4 bits (633), Expect = 3.3e-62
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS 60
           MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS
Sbjct: 158 MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS 217

Query: 61  LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGP 120
           LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFT+APGP
Sbjct: 218 LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTLAPGP 277

Query: 121 VVTPHQEPLQ 131
           VVTPHQEPLQ
Sbjct: 278 VVTPHQEPLQ 287

[Close]

BLAST of HG10020568 vs. NCBI nr
Match: XP_022948839.1 (uncharacterized protein LOC111452382 [Cucurbita moschata] >XP_022948840.1 uncharacterized protein LOC111452382 [Cucurbita moschata] >XP_022948841.1 uncharacterized protein LOC111452382 [Cucurbita moschata] >XP_023524494.1 uncharacterized protein LOC111788394 [Cucurbita pepo subsp. pepo] >XP_023524495.1 uncharacterized protein LOC111788394 [Cucurbita pepo subsp. pepo] >XP_023524496.1 uncharacterized protein LOC111788394 [Cucurbita pepo subsp. pepo] >KAG7037106.1 putative E3 ubiquitin ligase SUD1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 248.4 bits (633), Expect = 3.3e-62
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS 60
           MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS
Sbjct: 158 MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS 217

Query: 61  LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGP 120
           LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFT+APGP
Sbjct: 218 LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTLAPGP 277

Query: 121 VVTPHQEPLQ 131
           VVTPHQEPLQ
Sbjct: 278 VVTPHQEPLQ 287

[Close]

BLAST of HG10020568 vs. NCBI nr
Match: XP_008442459.1 (PREDICTED: uncharacterized protein LOC103486295 [Cucumis melo] >XP_008442534.1 PREDICTED: uncharacterized protein LOC103486295 [Cucumis melo] >XP_008442612.1 PREDICTED: uncharacterized protein LOC103486295 [Cucumis melo] >TYJ98894.1 RING/FYVE/PHD zinc finger superfamily protein isoform 3 [Cucumis melo var. makuwa])

HSP 1 Score: 248.1 bits (632), Expect = 4.3e-62
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS 60
           MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS
Sbjct: 158 MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS 217

Query: 61  LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGP 120
           LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGP
Sbjct: 218 LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGP 277

Query: 121 VVTPHQEPLQ 131
           +VTPHQEPLQ
Sbjct: 278 LVTPHQEPLQ 287

[Close]

BLAST of HG10020568 vs. ExPASy TrEMBL
Match: A0A0A0LSR3 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G033230 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 9.4e-63
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS 60
           MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS
Sbjct: 158 MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS 217

Query: 61  LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGP 120
           LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGP
Sbjct: 218 LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGP 277

Query: 121 VVTPHQEPLQ 131
           VVTPHQEPLQ
Sbjct: 278 VVTPHQEPLQ 287

[Close]

BLAST of HG10020568 vs. ExPASy TrEMBL
Match: A0A6J1KFH5 (uncharacterized protein LOC111492770 OS=Cucurbita maxima OX=3661 GN=LOC111492770 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.6e-62
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS 60
           MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS
Sbjct: 158 MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS 217

Query: 61  LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGP 120
           LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFT+APGP
Sbjct: 218 LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTLAPGP 277

Query: 121 VVTPHQEPLQ 131
           VVTPHQEPLQ
Sbjct: 278 VVTPHQEPLQ 287

[Close]

BLAST of HG10020568 vs. ExPASy TrEMBL
Match: A0A6J1GB12 (uncharacterized protein LOC111452382 OS=Cucurbita moschata OX=3662 GN=LOC111452382 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.6e-62
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS 60
           MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS
Sbjct: 158 MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS 217

Query: 61  LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGP 120
           LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFT+APGP
Sbjct: 218 LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTLAPGP 277

Query: 121 VVTPHQEPLQ 131
           VVTPHQEPLQ
Sbjct: 278 VVTPHQEPLQ 287

[Close]

BLAST of HG10020568 vs. ExPASy TrEMBL
Match: A0A1S3B5L6 (uncharacterized protein LOC103486295 OS=Cucumis melo OX=3656 GN=LOC103486295 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.1e-62
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS 60
           MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS
Sbjct: 158 MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS 217

Query: 61  LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGP 120
           LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGP
Sbjct: 218 LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGP 277

Query: 121 VVTPHQEPLQ 131
           +VTPHQEPLQ
Sbjct: 278 LVTPHQEPLQ 287

[Close]

BLAST of HG10020568 vs. ExPASy TrEMBL
Match: A0A5A7T1I5 (RING/FYVE/PHD zinc finger superfamily protein isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00810 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.1e-62
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS 60
           MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS
Sbjct: 173 MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFS 232

Query: 61  LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGP 120
           LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGP
Sbjct: 233 LLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAPGP 292

Query: 121 VVTPHQEPLQ 131
           +VTPHQEPLQ
Sbjct: 293 LVTPHQEPLQ 302

[Close]

BLAST of HG10020568 vs. TAIR 10
Match: AT5G62460.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 166.8 bits (421), Expect = 1.2e-41
Identity = 92/137 (67.15%), Postives = 104/137 (75.91%), Query Frame = 0


Query: 1   MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNG---DGEDDAYT 60
           MAAAERHF +A+YDEYAD++++G AFCRSAALIL+ALLLLRHAL LTN    D EDD   
Sbjct: 166 MAAAERHFFDADYDEYADSNSSGAAFCRSAALILMALLLLRHALNLTNNNSDDEEDDPSA 225

Query: 61  FFSLLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQG------QS 120
           FF L +LRAAGFLLPCYIMAWAISILQRRRQRQEAAALAA EVAFML +  G        
Sbjct: 226 FFFLFMLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAAAEVAFMLHSGGGGGGQRRGG 285

Query: 121 LQFTIAPGPVVTPHQEP 129
           L F + P  +  PH +P
Sbjct: 286 LHFAVPPELISNPHHQP 302

[Close]

BLAST of HG10020568 vs. TAIR 10
Match: AT3G47550.3 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 161.0 bits (406), Expect = 6.4e-40
Identity = 90/132 (68.18%), Postives = 103/132 (78.03%), Query Frame = 0


Query: 1   MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYL-TNGDGEDDAYTFF 60
           MAAAERHFLEA+YDEY++ +++G AFCRSAALIL+ALLLLR AL L TN D EDD   FF
Sbjct: 157 MAAAERHFLEADYDEYSENNSSGAAFCRSAALILMALLLLRDALNLTTNPDDEDDPTAFF 216

Query: 61  SLLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAA--QGQSLQFTIA 120
           SL LLRAAGFLLPCYIMAWAI ILQRRRQRQEAAALAA EV FM+     Q + L F +A
Sbjct: 217 SLFLLRAAGFLLPCYIMAWAIGILQRRRQRQEAAALAAAEVTFMIHGGGPQRRGLHFAVA 276

Query: 121 PGPVVTPHQEPL 130
           P P ++    P+
Sbjct: 277 PQPPISNVPTPV 288

[Close]

BLAST of HG10020568 vs. TAIR 10
Match: AT3G47550.6 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 161.0 bits (406), Expect = 6.4e-40
Identity = 90/132 (68.18%), Postives = 103/132 (78.03%), Query Frame = 0


Query: 1   MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYL-TNGDGEDDAYTFF 60
           MAAAERHFLEA+YDEY++ +++G AFCRSAALIL+ALLLLR AL L TN D EDD   FF
Sbjct: 157 MAAAERHFLEADYDEYSENNSSGAAFCRSAALILMALLLLRDALNLTTNPDDEDDPTAFF 216

Query: 61  SLLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAA--QGQSLQFTIA 120
           SL LLRAAGFLLPCYIMAWAI ILQRRRQRQEAAALAA EV FM+     Q + L F +A
Sbjct: 217 SLFLLRAAGFLLPCYIMAWAIGILQRRRQRQEAAALAAAEVTFMIHGGGPQRRGLHFAVA 276

Query: 121 PGPVVTPHQEPL 130
           P P ++    P+
Sbjct: 277 PQPPISNVPTPV 288

[Close]

BLAST of HG10020568 vs. TAIR 10
Match: AT2G02960.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 146.7 bits (369), Expect = 1.3e-35
Identity = 83/121 (68.60%), Postives = 101/121 (83.47%), Query Frame = 0


Query: 1   MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNG-DG-EDDAYTF 60
           +A AER +LE+EY EY  +SA+G AFCRSAALIL+ALLLLRHAL +T+  DG EDD  + 
Sbjct: 131 IAEAERRYLESEYVEYTASSASGAAFCRSAALILMALLLLRHALTITDDTDGEEDDPSSI 190

Query: 61  FSLLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAP 120
            SL+LLRAAGFLLPCYIMAWAISILQRRRQRQEAAAL AT+ A +LQ+ Q +++ FT++P
Sbjct: 191 LSLVLLRAAGFLLPCYIMAWAISILQRRRQRQEAAAL-ATQFALVLQSGQPRTVHFTVSP 250

[Close]

BLAST of HG10020568 vs. TAIR 10
Match: AT2G02960.4 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 146.7 bits (369), Expect = 1.3e-35
Identity = 83/121 (68.60%), Postives = 101/121 (83.47%), Query Frame = 0


Query: 1   MAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNG-DG-EDDAYTF 60
           +A AER +LE+EY EY  +SA+G AFCRSAALIL+ALLLLRHAL +T+  DG EDD  + 
Sbjct: 131 IAEAERRYLESEYVEYTASSASGAAFCRSAALILMALLLLRHALTITDDTDGEEDDPSSI 190

Query: 61  FSLLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQGQSLQFTIAP 120
            SL+LLRAAGFLLPCYIMAWAISILQRRRQRQEAAAL AT+ A +LQ+ Q +++ FT++P
Sbjct: 191 LSLVLLRAAGFLLPCYIMAWAISILQRRRQRQEAAAL-ATQFALVLQSGQPRTVHFTVSP 250

The following BLAST results are available for this feature:

BLAST of HG10020568 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895194.1	1.9e-62	100.00	uncharacterized protein LOC120083491 [Benincasa hispida] >XP_038895195.1 unchara...	[more]
XP_004137411.1	1.9e-62	100.00	uncharacterized protein LOC101217964 [Cucumis sativus] >KGN64004.1 hypothetical ...	[more]
XP_022997977.1	3.3e-62	99.23	uncharacterized protein LOC111492770 [Cucurbita maxima] >XP_022997978.1 uncharac...	[more]
XP_022948839.1	3.3e-62	99.23	uncharacterized protein LOC111452382 [Cucurbita moschata] >XP_022948840.1 unchar...	[more]
XP_008442459.1	4.3e-62	99.23	PREDICTED: uncharacterized protein LOC103486295 [Cucumis melo] >XP_008442534.1 P...	[more]

BLAST of HG10020568 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10020568 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSR3	9.4e-63	100.00	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G03323...	[more]
A0A6J1KFH5	1.6e-62	99.23	uncharacterized protein LOC111492770 OS=Cucurbita maxima OX=3661 GN=LOC111492770...	[more]
A0A6J1GB12	1.6e-62	99.23	uncharacterized protein LOC111452382 OS=Cucurbita moschata OX=3662 GN=LOC1114523...	[more]
A0A1S3B5L6	2.1e-62	99.23	uncharacterized protein LOC103486295 OS=Cucumis melo OX=3656 GN=LOC103486295 PE=...	[more]
A0A5A7T1I5	2.1e-62	99.23	RING/FYVE/PHD zinc finger superfamily protein isoform 1 OS=Cucumis melo var. mak...	[more]

BLAST of HG10020568 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62460.1	1.2e-41	67.15	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT3G47550.3	6.4e-40	68.18	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT3G47550.6	6.4e-40	68.18	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G02960.2	1.3e-35	68.60	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G02960.4	1.3e-35	68.60	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022143	Protein of unknown function DUF3675	PFAM	PF12428	DUF3675	coord: 1..80 e-value: 3.3E-32 score: 111.5
IPR033275	E3 ubiquitin-protein ligase MARCH-like	PANTHER	PTHR23012	RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING	coord: 2..117
None	No IPR available	PANTHER	PTHR23012:SF181	E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED	coord: 2..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020568.1	HG10020568.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding