HG10020477 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020477
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	UPF0430 protein CG31712 isoform X1
Location	Chr04: 32129598 .. 32139507 (+)
RNA-Seq Expression	HG10020477
Synteny	HG10020477

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAATGAAAAGAAGAAGAGAAAAAACAAGAAAAAGAAGAACAAACCGATTAGAACCTCAGAAGATGAAATGATTGTATCAGAATCGACTTCTGTGGATGATACTCACATGAGAAATGGACAGAATGATCAAAATCCAATTTCTGACACAGTAGATCTTTCATACCAGCATAGCAGTGGAACAAAAGATGTATGTTTGTCTTTAAATTCAATAATGGTTCATCACCTATCTATATAATTGGGTGGTGTGATTCATCGCTAGCTGCTGGATGTAGTGGATGACATGAACGTGTGCAGTCCCTTCTATTTATTCATATATCTTATTTTATAAACACGAATAAGCTCTATCTTTGAATCTGATGCATACCATCTTACTAAAGACCAGAAAGCAACCCTGAAAAAATTGATGCCCTTAGCTCTGTCTTCTCACCCAAGGTCCCCGTAGATCAAAATAAATAAAGATACGAAATCCATGCAATCTAAATTCATTACTAATATTTGAACTACACTTAACATGGTTTTCCGTCTTAGAAGAGATAATCGAAGATTTGAGGAAGGAAAGCCTTTTGCTTGCACATAAAAAGGCGATGTCATAATTGCACAAATTCCACCGATGACAATCGGGTGCTTTCTTTCCCCTATTAATGCATTTTCTATTTCTTTGCAGGCTAAGCTGGAGGATACAATTAAGCATTTACATGAGGAAAACAATGTACATATACAAAAAATGGTAATCAATTTAAGCAAACATTCAGACCCCATTTGATAACCATTTGATTTTTTGTTTTTGAAAATCAAGTTTATAAATACTACTTCTACCTATATGTTCATTTGTTTTATTATCCATTTCTGCTAATGTTTTAAAAAACCAAACCAAGTTTGAAAACTAACTAAAGTAACCTTTAAAAACTTGCTTTTGTTTTGAGACTGATTAAGAATTCAAGTGTATCATTAAGAAATGTGAAAACCGTGGTGCAAAAATTTGGAGGAAAAAAGTATAGATTTCAAAATAAGAAAACTGAAAACGAAATCGTTTTTAAACGAGGCCTCAAGTAACTGATCTATGTGCTTGTGAATTGTGTCTTTTCAAATAATTTTTTCTTGCAGGCTGACCTAGAGTTGAAGCTTGTGGAATGCGAGGGTGAAAAACACTCATGGCTTCAAAAAGAGGTGATTTTTTTAAAAGTATCTTTTTTCTATGCACTAATCTAATCATTTAAATTTTAAAGTGGCCATATTTAATTTTCTAAAAGCAGGAAGCACATTGAAGTACACTAAATTTCTATACTAAAGTGTGAAGTGCAAAAAGAGCAAGCAAGGACTTCTTTTTTATTGTCAAGCGCATAAATTGAAAATAAAAATAAGAATATCTTATATGGAAAACCATAGTATTAAAAATAAAAACAAAGAAAAGTAAAAGAAATGTTAAGAGCAGGATTTTAGAGAACATTGCATATTTTGTTAACAAATATCTATATCTATACTATATTAAAAGGGGCTATGAGGGGAGAAATTTTAATTCCCCTCTTTGCCTTTAAATTTTTTGATAATGTCCATTATACCCTTATAGTCACACCCCTTCACTATATGTAGCTTTCATGTCTTCGCCAGTAACTGTCCATGCATCGCTTCAATAAAAATCAATATAAGCTATAAGGGGAGAATTTTTAACTCCCCTCTTTGCCCTTAAATTTTTTCATAATGTCTATTTTACCCTTATAGTTATACCCCTTCATTATACGTAGCTTTCATGCCTTAGCCAATAATTATCCACGCATCGCTTGAACAAAAATCAATAAAACAAAAAAATTGAACCCCAAAATCTTCAAGCATAAACCTTGCATGCTCACACGTAATCAAAATAGCATTTTTTTGCAAATAAAAATTGAAGATGGAGTCGGAGAATCTTAAGTGCTTTATGAGGTGAAATCAACTATGGAAGAAAGAAGATCACAAGAAGTTTTAAGGACAGGGCCATGGAAATTTCCCTATCCTTTCTTCCAATCTTCAAAGAGTAACAATTTGAGAGAAACAATCGCCGAAAACTGAGAAAAAAATATGGAGAGAAATTCAAGCAAGAAGGAGACGAGGGTGATGGTGGATAGACATGGTTATGGTGGAAGATGCTTTTAGGAATTTAGAGGTTCCTTTGGTTGGAGGTCAATTTCTCTCTTTTTTAAGTAACCAACAAAGAAATCCATCATTCACAACCTTTCTTTGATATCACCCTAAAATTAGGGTTAAAGAGCTCTCATGTAGTTGATTCAATACCATGTCTATAGATACATAAAATTCAGTAAAATCTATCTAATATTGCCCATAATACATGGCAATCAAATAAAATAAAAATAGAAAATAATTTTAAGAAATTATATTAATCCTAAAATCTAGGAAAGGAATAATATGGAACCTCTTTGTCCTTCTTTTTTTCAATAATGGTGAGTTTTTATTATCCAATTTGTTAATTCATTGGGTTAGTTATAGGTTGACACTCTTTTCTTAATTTAACATTTCATCGTTCAAACATTTTGCTTAATGTCTTACTTCATTTTACGTCTTTGATTACTTTTAAATTTCATGTCCAGTATTTGTATTTCACCCTAGAAAATTTTGCACCCAACACATTTCATATTCATTATGACCAAATAAAACATATATAGTATTTTAGCCATTATCTCTTTCATTACTCTTATATTTGGTGTTAGACATTTACTATTTAAATTAAATTAAAAGTATATTCATTTTATAATTTATGTTCTACAGATTTTAAATTCTAACTAGTAAGAAAAATTTGAGACTCTGATGTGGCATCCTGGATGTCTGCTTTTTTAGCATCGGTCATGCCCCCATACAACATTCATTTTGCATTACAGTTTTGTTTTTTATTTTTTAATGCATCTGTTGGTTTCTTGTTCTATCTATTTACCTCTTTAGAGATTGGGGTTCCATTGTTTTCAATCTGCAGGCAGCGTTAGTGGATAAAATTACAAGCTTACAAGAGGACAAGACTGCCTTGGATTTAGAAGGGGTAATATTTTTATGCTACATAGTTCCTTCCTCTACAAAGCGATTTAATCATTACTTTTTTCAGCTTTCCTCGTCGATGTGCACAATTATTTGTTCTATTAATTTTGCACTAAATTTCCTCCTTTTGTATTATCAAGGCCAGGTTATTGCACACAATTGAGCATCTAGAGAGAGATAAAGCTTCATTAATTCTTAATGAGGTAATCGATATATTGTTGATGCTTGATAGAGACATGGTGTGAATTCTCCTTTTTTTTTTATTTGTAACCCTTTTATGTGGGAAAAAATACATTTTTTCGAGTAAGGGTACATGTTTCTTAATAGTATTACTTATGTATGCATAGAAGAGAGGGAGGATAGGTGATGTAATAGGATTTAGGATTCCTTTAATCCAACCAGCTCTTGGTTTTGATTTTCTTGAATTATTTCTTTCTTGAACTCTTGCCATTATTCTGAAAGCTGATCCATGTTTTGAGTCATCTTTCCTAACAAACGTTGGATTTCTTTTACTCCATTCTTCATTTCCTCCAATACTTCAGGATTGATATAGGACTTGGGTGTTCTTGAATAAGTTTTAGTCTCATAGTTGTTGTAGGGCCGATTCTTGGGTTCTCTTGAATATGTTTCAACCTTTCTTCATTCTCCATAACTAAGATAATGAGTTTTGACCCTAAACGTATTAGTTCTACTATAAAAACCCATTCTTGGATGATTCTTCAAATTTCTTCTTGCTCTTCTTGAATTTAAAGGGTTCCCCCTGATTAGGTGTGTGTTGTTCGGCAATGAGCACAACTTACGAAGCTCCCTCTTGCGATCGTCGTTGTCAAGAGTTTCTCAGTCTTCCATCGGCGGCAGTCAACGTTGGCCTAGGTGGCTGCTCTGATACCAAATTGATGTAGCCTAAAGTAGGGATGGCAAAATTCCCCGCAGGTACCTGCCCCGATCGGGGCGGGAAATCTCTAGTTTGACTGGGGATGGGGTCAAACTGGGGACACAAAACGGGTCGCTGAACTGGGGACAAGGCAGGGACGGGGAGGGTATCCCGACCCTGTCCCCGACTATTAACTTTTTTAATATATGTGTGTGTGTGTGTGTTTGTTAAATTTTTTAAAACTTTTTTTTAAAAAATTTTCATTTCATAATATAATTAATTTAACTTGTTATTAAACTTACAATAAAAAATGTTAAAATATTTTTTTTTTATTAATTTAAATAAAGAAAACAATAATAATACTTATTTGTTAGGGCTGTTTTCAAATATAGAAAAAATATCAAACTATTTACAAATATAGAAAATTTTTACTGTCTATTAGTGGTAGATCGCAATAGAATTCTATCGCTCATAGAATTCTATGCAGTCTATCGCTGTTAGACAATGAAATTTTTCTATATTTGTAAATAGTTTGATATTTTTTCTGTTTATAATAATTTTCCTATTTGGTTACCTTAAATATTTACAATTTTAACATAAATATCAATTTTTAATTGATTTTAAATAAAAAATAATTAAAAATAAAAATAAAAAACGAGAATTTTTTCCCTGCGGGGATCTAATCCCCGAATGGGGATTCCCCGACCCCGACTCCCATTCCCCAAAACGGGGAATGTGGTGGGTACGGAGATTATAAATCCCCACGAGGACGGGGATGGGGAGTGCATCCCTGGCCCCGCCCCGCCCCGCCCCGCCCCATTGCGAACCCTAGCCTAAAGAGATAAAAGGAGAGAAATCTTCAAGAATCCAAACAAAATCTTTATTATTATGTGAGGCCCCCTCTTACATACATACAGTAGGAGGGGTAGAAGGGGAAATTCACCCATTTAGTTAATTTTTCTGTTAGTGGGCGAAATCATATATATGTATTTTGTGTTACATTTTGGTTATGTATTTTTTAAGTTAAGACTTTGGTAGTCAATTGGGAGAGAACCACCCTCTCGAATAGGTGGAGAGTCTGTAATCTTGTTTTAATAAATATCAAATCATAGCTTCCTATAGGAAGTGTTACATAGTATTTCTTTTGAAACAGAAATAAGTATTTTTCATTTAATTAATGAAATGAGTCTAATGCTCAAAGTACAATGAAACAAACAAAATACAACAAAGAAAATGGAGCAACAAGAACAAAATGAAAGATAAAGGAGACCAATCCTTAATACAAGTACAACACCCAATAGACAAAAAATTCCAGGCTGCCAATCTTCTAGCAAAGTACAAGACTTGAGACATGAATGCCATAAAGTTTTGAAAGTAGAGGAAACTTGAAAAGGAGCTCAAAACCAGACTGGCTTGCCTACTACCAACCCTAGAGATCTAGCCAGCCAAACATAAAACACCAAAACCACCGACCAATAATAATAACACAAATGGAGGAGAGCACAAGAATTCGAAAAATAAAATAATGCATTGAAGACTTGCACCACATATCCAAAATACTATAAAAACTCCATAGCTGAAATTGACCAAAATAAGATCTCCAATCATAACACTATATGAACAACCACAAACCAAACAAAACAACCTTACAAGTAGTGAAAGGCCTCCTAACCAAACATTTCATCTTTCAATGAGTTCAATTTCTGGACAAAACCACCAAATTATGCTTGAATTGAGGGAGATTGAGGAGGAATTGCTTCCATCTGAAAACCACATTTTTCAATCAAAATAGTGAACTTGGCAGGAATTATGGGAGACAATTTTGCTTGGACATTTTCACCCTTCTCAAACAAAGTATCAAAACCATTTGCAAAGCAAACCTCTAGAGTCTCCTCAACAATATCAACTTGTACTAGAGAATCCATAATATCCTCACTGCTTAAACTAGCATCTGAATCACCATTAGAATCGTAACCAGAAGGAGTGTCTTTAGGAGATGGATGACTATAAACTCTTTTTACAAAAGTAATATTTGATCCAACAAAATCTTTATTATAAATGAAAGGTTGTTTAATACAAGAGAGGGGATTCTCTATCTATAGAGAATAAAATGCAAGAAAGAATCCTAAAAGGATAACTAAAAGAAAACTAATTTCTATGTAAAAAAGGAATTAATTAAGGAATTAAACTAAGTTATACTAAATCCTATTACATCAATAGGAGTTGGTGCAAAAGTGTTAATAGGAATATGATAGATACAACTCTATTGATTTATATTATAGAATATTACAAATATGACGGTGGAGATTCAAACCTCAACCTACGAGGGAGGTTACTGTCGCCTTGACCCATAATCATTTAAGTTATGTTAAAGTTATTAATTGTTCATGCATTACCACTTGTGGTTGCTTGTTGGCCAATTTCCTGATGTTGCTTGCCTTTCGTCTGAGTCGTGTGTTGCCTTGAAAACACTGTTTGAGTGTATTGATGATTGAGCATCGAGCATTGCCATTGACTATAGACTATAGTTGAAGCTTCAAGCCCAAAGTTAACAACGAGGCAAGTGCAAGGAATTAGGAAGGAGATTTGGTGACATGAGATTTGGGAGATCTATTCCAAACATTGGTAGGAGCTACAACTTATAAGAAATCTTGCCCATTGTTTCCAAAATGGAGGAGGCTGATGGAATCTACTTGCCAACTTCTTCAAATATCTTGGTTGTAAATTGTAAGTCGAGAATTATCGAGTTGCGTGGTTTAAATTCCATGTCTGATGTCCCTTCTATCATCTATGTTAATCTACAAATGTGACTTTTTTTTTTTTGATATCCGTGAGTGTTCGGGCCAGCTTACGTGCACCTTGACTAATTTCACGGGATAACCCGCCTGACCGTACAACATTTGGGTGTCAAGGAAACTCGTAGGAAATTAATTCCCTGGGTAAGTGATCACCATGGATTGAACCTATGACCTCTACCATGGATTGAACCTATGACCTCTTAGCCATTTATTGAGACTATGTCTCCTTTTTTACCATTAGGCTAACCCATGATGGTTTCGGCAGATGTGACTTTTATCAGATAATATGTCTATTTACCTCCTTCAATTGACTATCAGGATGGGGTAATAGTGATAGTGACACTATGTTCAAAGTATTCTCGTAGGTTCTAATTAGATCATCCCAAAATAAACTCATCGACACCTTGTCTCTACTTGAAGTTGGCAATTTGTGGATGCCATATGATTTCACAATTCCTCAGTCAATCCATCCACTGCTATTTTGAATTTATTTGTACAACAAATATGGGGGTGGGAATTTGAATAATCAATTCACCGCTATTAGGATAGTGTATCCTATAGCGGAATCCATCTAAGGTCATGCCTTGCCGATGTAATTTGAGAATGAGGAGTGGTTAAATCCGACAGACCTACTAAACACACTTATATTAGGAGAAAGAAGAGTAGAGAAGTGGAGACAGAAAAGAAATTAGTTAGTTAGAGGCAGCACGGGGAGGGAATATTTTGTGTGTGTGGGTGACAATGGCATTAGGGCCCCATTTGGGTATTTTTTTAACAAGTGGTATAGATAATAGTTGATGTATTGGGAAAAGAAATTGTTTGTTGTGCAGTAGCTTCTGGGAGATGCTCATGCCTCTTGTAATGCCCGAGAGTTGTCTCTTTCCTCTCACTGTGAGCTATTCAAGAGATCAGTAAACTCTAATTATCAACAATCATCATATCTCAACCTCGGCGGTGATGTGAACTGCTTGTGTTAGCAAACATTACAACTCCTCATGTCTTGTTAGTACAAAATAAGCTGAAAGGCTTGAGCTTAGGAGTAACCAACCATCATACTATAATGGCACACTTATTACAAGAGGGATGCCGGGGGTTGATCCCCTAGCCCAGTAAACATTCTTTTATACTGGAATTGACCCAGTTCAACTTTAAAATGTGGGAAAGCATCCCTCGCCTGACCCATGGCCTTTTTCATGAGAGAAAGCAAAAATCATTATCCATATATGCTTGTTGTTTGTGGACAAATACTATAACCCATCCCCTCAAGCGTTTGGGTTAAGTGAAATATCAGTCAGTTTCTTTAATAGATCCAGCTAATGACTCCTTGTTGGCCTGGTGATTATTTGCAAATTCTTCTCTAGCGTCCAACTTCTTATGTGTTTAAATGCTCAATGAACATTTAGGGACTGGGGAAATTTGGTTTAAAAGGTTTATTATATGCAAAATGATTGATGCTAGATTAGTGATTCATCAACAAGTTAATTAAAATTTTAAGGTCTACAAATATGGTTTTTAGTCTTTTATTAACTAGGGAGGAGAAGGAAAAAATTGTGGACAGGATTTAGCTTTATTGTATATGTTATTTTGGATCCACAATGGGCTCTCATTGTGTGCTGTCATTATAGGGGGATTATATTCTTACCGAAGTTGGTTTTTTCATTCACAGAAATCAAGCAGGGAGACGATAATTGATAAGAACAAGGACATCTCTAGGTTGCAGGCACGGGTATGCTGCTTCATTAACTTAAGTAAACCACTAATAAATTGCATAAAGTAAACACGAGTTTTATCTCTTTCAGTTGCTTTCTGGTTGTGCAAACAGCCACCAACTTTGATTGTGATGTCACCATGTTTATTGGAAGAATTAGTAACAAGTTGAATAGGGTCTGGAGGATGTTGGTGGCTTTAACTTGAAACTTATCATACAGGACCATTTATTTACTTATGGGTACTTGTTCATTCACGAGCTGCGAGCATAGGACACTACTTTTTGTTCTAATGAGGAATTGAAACCAAAGTTTGACAGGTTGTGGAGTTGGAAAAACAAAGACATGATCTGTTGCAAGAAAACAAACAACTGACGGAAAATGTTGCTGATTATCAGTCAAAACTTCTGAACCTTGAGAGGAAAATATCTTCCACTTACACACACTCTTCAGATCGAGTCACAAAGGTAAACGTCTTATCCTCACCTATTAAACGGTTAAACTTCACAAGTTTATTTTTGCATTGAGAATAAAGTCCCTTAGAAGAACTTCGCAAGATCTGCTAAAACCAAGCTGTAGACAATTCTCTTTTGGGAGATAACTTTTGGTCTCCTTTAAGATGATGGTTTTTTTGTTCTTTTCCCTGAATTATAGTGCACGAATAATTAATTACTCCTTGTATACCTCATGTCAATGTGTACGAGATGAGCAGGAGATGTTGAGTTCACAAGTTGATGCAGCTTGTATTCTGGTTGATAAATTGATTACAGAAAATGCAGAGCTTATTGGGAAGGTAATAGCACTGCTGTAATATCCGTAGTGCACATCTGTGATACTTCCTTGTGCCTAGTTTCATTTCGGAAATTTTTTAGTTTGATCTGAACTGACCTTGTATTGAAAGAGAGCATAATTGCTGAACTCCTGATATCATGTTTTATGATATAGTGATGTTATATTTAGATGCAGAGTAGCTGGATAAAAATCCATTTCTTACAGATGTTATGAAATTATGGTCATTGCTTTATCTGGAGGTTAACAACTCACGCTTTTTATTCTTAGGTGAATGAGTTATTTGTTGAGCTTCAAAGAGTTACAAAGACTGAGCTATCTCCAGGCGTGGAGCCTGACCAGACGGCTGAAGCTACTGACACCGCCACTTTCAACGATCCCAAGCCTCCCTTGATTCTGAATAGCATCACATCAAGTAAAAGTTTGGACGCATTAAAATCTGTTCCAATCCACAACCATAGCATTAGTAATGATTTTGTGGAGCTGGACAACGATTTTCTGGCTCCAAAATCCTCAATGCCTCTGGCGGCAGGAGAAATCGAACAAATTCCGTTGCATGAAATTGAAGATAGGAACAGGGACCGAGAACTGCCAGCTACAGAGAGCGATGAGAAGGATGTGCTGCTTTCAGATGCTCCTTTGATTGGGGCTCCTTATCGGTTGATGTCATTTATGGCCAAATACGTAAGCGGCGCTGACCTGGTTGGCAAAAGCTGA

mRNA sequence

ATGGAAAATGAAAAGAAGAAGAGAAAAAACAAGAAAAAGAAGAACAAACCGATTAGAACCTCAGAAGATGAAATGATTGTATCAGAATCGACTTCTGTGGATGATACTCACATGAGAAATGGACAGAATGATCAAAATCCAATTTCTGACACAGTAGATCTTTCATACCAGCATAGCAGTGGAACAAAAGATGCTAAGCTGGAGGATACAATTAAGCATTTACATGAGGAAAACAATGTACATATACAAAAAATGGCTGACCTAGAGTTGAAGCTTGTGGAATGCGAGGGTGAAAAACACTCATGGCTTCAAAAAGAGGCAGCGTTAGTGGATAAAATTACAAGCTTACAAGAGGACAAGACTGCCTTGGATTTAGAAGGGAAATCAAGCAGGGAGACGATAATTGATAAGAACAAGGACATCTCTAGGTTGCAGGCACGGGTTGTGGAGTTGGAAAAACAAAGACATGATCTGTTGCAAGAAAACAAACAACTGACGGAAAATGTTGCTGATTATCAGTCAAAACTTCTGAACCTTGAGAGGAAAATATCTTCCACTTACACACACTCTTCAGATCGAGTCACAAAGGAGATGTTGAGTTCACAAGTTGATGCAGCTTGTATTCTGGTTGATAAATTGATTACAGAAAATGCAGAGCTTATTGGGAAGGTGAATGAGTTATTTGTTGAGCTTCAAAGAGTTACAAAGACTGAGCTATCTCCAGGCGTGGAGCCTGACCAGACGGCTGAAGCTACTGACACCGCCACTTTCAACGATCCCAAGCCTCCCTTGATTCTGAATAGCATCACATCAAGTAAAAGTTTGGACGCATTAAAATCTGTTCCAATCCACAACCATAGCATTAGTAATGATTTTGTGGAGCTGGACAACGATTTTCTGGCTCCAAAATCCTCAATGCCTCTGGCGGCAGGAGAAATCGAACAAATTCCGTTGCATGAAATTGAAGATAGGAACAGGGACCGAGAACTGCCAGCTACAGAGAGCGATGAGAAGGATGTGCTGCTTTCAGATGCTCCTTTGATTGGGGCTCCTTATCGGTTGATGTCATTTATGGCCAAATACGTAAGCGGCGCTGACCTGGTTGGCAAAAGCTGA

Coding sequence (CDS)

ATGGAAAATGAAAAGAAGAAGAGAAAAAACAAGAAAAAGAAGAACAAACCGATTAGAACCTCAGAAGATGAAATGATTGTATCAGAATCGACTTCTGTGGATGATACTCACATGAGAAATGGACAGAATGATCAAAATCCAATTTCTGACACAGTAGATCTTTCATACCAGCATAGCAGTGGAACAAAAGATGCTAAGCTGGAGGATACAATTAAGCATTTACATGAGGAAAACAATGTACATATACAAAAAATGGCTGACCTAGAGTTGAAGCTTGTGGAATGCGAGGGTGAAAAACACTCATGGCTTCAAAAAGAGGCAGCGTTAGTGGATAAAATTACAAGCTTACAAGAGGACAAGACTGCCTTGGATTTAGAAGGGAAATCAAGCAGGGAGACGATAATTGATAAGAACAAGGACATCTCTAGGTTGCAGGCACGGGTTGTGGAGTTGGAAAAACAAAGACATGATCTGTTGCAAGAAAACAAACAACTGACGGAAAATGTTGCTGATTATCAGTCAAAACTTCTGAACCTTGAGAGGAAAATATCTTCCACTTACACACACTCTTCAGATCGAGTCACAAAGGAGATGTTGAGTTCACAAGTTGATGCAGCTTGTATTCTGGTTGATAAATTGATTACAGAAAATGCAGAGCTTATTGGGAAGGTGAATGAGTTATTTGTTGAGCTTCAAAGAGTTACAAAGACTGAGCTATCTCCAGGCGTGGAGCCTGACCAGACGGCTGAAGCTACTGACACCGCCACTTTCAACGATCCCAAGCCTCCCTTGATTCTGAATAGCATCACATCAAGTAAAAGTTTGGACGCATTAAAATCTGTTCCAATCCACAACCATAGCATTAGTAATGATTTTGTGGAGCTGGACAACGATTTTCTGGCTCCAAAATCCTCAATGCCTCTGGCGGCAGGAGAAATCGAACAAATTCCGTTGCATGAAATTGAAGATAGGAACAGGGACCGAGAACTGCCAGCTACAGAGAGCGATGAGAAGGATGTGCTGCTTTCAGATGCTCCTTTGATTGGGGCTCCTTATCGGTTGATGTCATTTATGGCCAAATACGTAAGCGGCGCTGACCTGGTTGGCAAAAGCTGA

Protein sequence

MENEKKKRKNKKKKNKPIRTSEDEMIVSESTSVDDTHMRNGQNDQNPISDTVDLSYQHSSGTKDAKLEDTIKHLHEENNVHIQKMADLELKLVECEGEKHSWLQKEAALVDKITSLQEDKTALDLEGKSSRETIIDKNKDISRLQARVVELEKQRHDLLQENKQLTENVADYQSKLLNLERKISSTYTHSSDRVTKEMLSSQVDAACILVDKLITENAELIGKVNELFVELQRVTKTELSPGVEPDQTAEATDTATFNDPKPPLILNSITSSKSLDALKSVPIHNHSISNDFVELDNDFLAPKSSMPLAAGEIEQIPLHEIEDRNRDRELPATESDEKDVLLSDAPLIGAPYRLMSFMAKYVSGADLVGKS

Homology

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BLAST of HG10020477 vs. NCBI nr
Match: XP_038906167.1 (myosin-6 [Benincasa hispida] >XP_038906168.1 myosin-6 [Benincasa hispida] >XP_038906169.1 myosin-6 [Benincasa hispida] >XP_038906170.1 myosin-6 [Benincasa hispida])

HSP 1 Score: 591.3 bits (1523), Expect = 5.9e-165
Identity = 330/393 (83.97%), Postives = 348/393 (88.55%), Query Frame = 0


Query: 1   MENEKKKRKNKKKKNKPIRTSEDEMIVSESTSVDDTHMRNGQNDQNPISDTVDLSYQHSS 60
           M+NEKKKRKNKKKK + IRTSEDE+IVSESTSVDDTHMRNG NDQNPISD VDLSYQH S
Sbjct: 1   MDNEKKKRKNKKKKKQQIRTSEDELIVSESTSVDDTHMRNGLNDQNPISDAVDLSYQHIS 60

Query: 61  GTKDAKLEDTIKHLHEENNVHIQKMADLELKLVECEGEKHSWLQKEAALVDKITSLQEDK 120
           GTKDAK EDTIKHLHEENN+H Q+MADLELKLVE E EKHSWLQKEAAL+DKI SLQEDK
Sbjct: 61  GTKDAK-EDTIKHLHEENNIHTQRMADLELKLVEYESEKHSWLQKEAALMDKIRSLQEDK 120

Query: 121 TALDLEG---------------------KSSRETIIDKNKDISRLQARVVELEKQRHDLL 180
           TALDLEG                     KSS ETI+DKNKDISRLQA+VVELE+QR DLL
Sbjct: 121 TALDLEGARLLDTIELLERDKASLILNEKSSWETIVDKNKDISRLQAQVVELEEQRRDLL 180

Query: 181 QENKQLTENVADYQSKLLNLERKISSTYTHSSDRVTKEMLSSQVDAACILVDKLITENAE 240
           QENKQLTENVADYQSKLLNLERK+SSTY HSS RVTKEMLSSQVDAA ILVDKLITENAE
Sbjct: 181 QENKQLTENVADYQSKLLNLERKLSSTYMHSSGRVTKEMLSSQVDAARILVDKLITENAE 240

Query: 241 LIGKVNELFVELQRVTKTELSPGVEPDQTA-EATDTATFNDPKPPLILNSITSSKSLDAL 300
           LIGKVN LFVELQRVTKTELS GVEPDQ A EAT TATFNDP+PPLILNS+TSSKSLDAL
Sbjct: 241 LIGKVNGLFVELQRVTKTELSSGVEPDQMAKEATGTATFNDPEPPLILNSVTSSKSLDAL 300

Query: 301 KSVPIHNHSISNDFVELDNDFLAPKSSMPLAAGEIEQIPLHEIEDRNRDRELPATESDEK 360
           +SVPIHNHSI +DFV+LDNDFLA KSSMP+AAGEIEQ PLHEIEDRNRDRELPAT SDE+
Sbjct: 301 ESVPIHNHSIGSDFVDLDNDFLASKSSMPMAAGEIEQTPLHEIEDRNRDRELPATGSDEQ 360

Query: 361 DVLLSDAPLIGAPYRLMSFMAKYVSGADLVGKS 372
           DVLLSDAPLIGAPYRL+SFMAKYVSGADLVGKS
Sbjct: 361 DVLLSDAPLIGAPYRLISFMAKYVSGADLVGKS 392

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BLAST of HG10020477 vs. NCBI nr
Match: XP_008442312.1 (PREDICTED: uncharacterized protein LOC103486222 [Cucumis melo] >XP_008442313.1 PREDICTED: uncharacterized protein LOC103486222 [Cucumis melo])

HSP 1 Score: 567.8 bits (1462), Expect = 7.0e-158
Identity = 313/393 (79.64%), Postives = 341/393 (86.77%), Query Frame = 0


Query: 1   MENEKKKRKNKKKKNKPIRTSEDEMIVSESTSVDDTHMRNGQNDQNPISDTVDLSYQHSS 60
           M+N KKKRKNKKKKNK IRTSEDEM+VSESTSVDDTH RN QNDQNPISDT+ LSYQ SS
Sbjct: 1   MDNGKKKRKNKKKKNKQIRTSEDEMVVSESTSVDDTHPRNRQNDQNPISDTLLLSYQQSS 60

Query: 61  GTKDAKLEDTIKHLHEENNVHIQKMADLELKLVECEGEKHSWLQKEAALVDKITSLQEDK 120
             KDAKL+DTIKHLHEENN+HIQ+MADLELKLVECEGEKHSWLQKE AL+DKI +LQEDK
Sbjct: 61  AKKDAKLDDTIKHLHEENNIHIQRMADLELKLVECEGEKHSWLQKEEALMDKIRNLQEDK 120

Query: 121 TALDLEG---------------------KSSRETIIDKNKDISRLQARVVELEKQRHDLL 180
           T+LDLEG                     KSS+ETI+DKNKDISRLQA+VVELE+QR DLL
Sbjct: 121 TSLDLEGARLLNTIKLLERDKASLILDEKSSKETIVDKNKDISRLQAQVVELEEQRCDLL 180

Query: 181 QENKQLTENVADYQSKLLNLERKISSTYTHSSDRVTKEMLSSQVDAACILVDKLITENAE 240
            ENK+LTE VADYQSKLLNLERKISSTY HSSDRVTKE+L+SQVDAA ILVD+LITENAE
Sbjct: 181 HENKELTEKVADYQSKLLNLERKISSTYIHSSDRVTKEILNSQVDAARILVDRLITENAE 240

Query: 241 LIGKVNELFVELQRVTKTELSPGVEPDQTA-EATDTATFNDPKPPLILNSITSSKSLDAL 300
           LIGKVNELFVELQRVTKTELS GVEPDQ A EATDT TFNDP+PPLILNS+T  KS DAL
Sbjct: 241 LIGKVNELFVELQRVTKTELSSGVEPDQMAKEATDTTTFNDPEPPLILNSVTCGKSSDAL 300

Query: 301 KSVPIHNHSISNDFVELDNDFLAPKSSMPLAAGEIEQIPLHEIEDRNRDRELPATESDEK 360
            SVPIH+HSI  DFV+LD+D+LA KSSM +A GEIEQIPL + +DRNR+RELPATE DEK
Sbjct: 301 NSVPIHSHSIGGDFVDLDSDYLASKSSMRMATGEIEQIPLPQFDDRNRNRELPATEIDEK 360

Query: 361 DVLLSDAPLIGAPYRLMSFMAKYVSGADLVGKS 372
           DVLLSDAPLIGAPYRL+SFMAKYVSGADLVGKS
Sbjct: 361 DVLLSDAPLIGAPYRLISFMAKYVSGADLVGKS 393

[Close]

BLAST of HG10020477 vs. NCBI nr
Match: XP_004137671.1 (uncharacterized protein LOC101221440 [Cucumis sativus] >KGN58680.1 hypothetical protein Csa_002486 [Cucumis sativus])

HSP 1 Score: 558.9 bits (1439), Expect = 3.3e-155
Identity = 309/393 (78.63%), Postives = 341/393 (86.77%), Query Frame = 0


Query: 1   MENEKKKRKNKKKKNKPIRTSEDEMIVSESTSVDDTHMRNGQNDQNPISDTVDLSYQHSS 60
           M+ EKKKRKNKKKKNK IRTSEDEM+VSESTSVDDTH RN QNDQNPISDT+ +SYQHSS
Sbjct: 1   MDKEKKKRKNKKKKNKQIRTSEDEMVVSESTSVDDTHPRNRQNDQNPISDTL-ISYQHSS 60

Query: 61  GTKDAKLEDTIKHLHEENNVHIQKMADLELKLVECEGEKHSWLQKEAALVDKITSLQEDK 120
           GTKDAKL+DTIKHLHEENN+HI++MADL+LKLVECEGEK+SWLQKE AL+DKI +LQEDK
Sbjct: 61  GTKDAKLDDTIKHLHEENNIHIKRMADLDLKLVECEGEKYSWLQKEEALMDKIRNLQEDK 120

Query: 121 TALDLEG---------------------KSSRETIIDKNKDISRLQARVVELEKQRHDLL 180
           TALDLEG                     KSSRETI+DKNKDISRLQA+VVELE+Q+ DLL
Sbjct: 121 TALDLEGARLLNIIKLLERDKASLILDEKSSRETIVDKNKDISRLQAQVVELEEQKRDLL 180

Query: 181 QENKQLTENVADYQSKLLNLERKISSTYTHSSDRVTKEMLSSQVDAACILVDKLITENAE 240
            ENKQLT  VADYQSKLLNLERKISSTY HSSDRVTKE+L+SQVDAA ILVDKLITENAE
Sbjct: 181 HENKQLTGKVADYQSKLLNLERKISSTYIHSSDRVTKEILNSQVDAARILVDKLITENAE 240

Query: 241 LIGKVNELFVELQRVTKTELSPGVEPDQTA-EATDTATFNDPKPPLILNSITSSKSLDAL 300
           LIGKVNELFVELQRVTKTEL  GV PDQ A EATDT TFN+ +PP+ILNS+TS KSLDAL
Sbjct: 241 LIGKVNELFVELQRVTKTELPSGVVPDQMATEATDTTTFNESEPPVILNSVTSGKSLDAL 300

Query: 301 KSVPIHNHSISNDFVELDNDFLAPKSSMPLAAGEIEQIPLHEIEDRNRDRELPATESDEK 360
           KSV IH+HSI  DFV+L +DF+A ++SMP+AAGEIEQI LH+ ED+N  RELPATE DEK
Sbjct: 301 KSVSIHSHSIGGDFVDLGSDFMASEASMPMAAGEIEQIQLHQFEDQNGTRELPATEIDEK 360

Query: 361 DVLLSDAPLIGAPYRLMSFMAKYVSGADLVGKS 372
           DVLLSDAPLIGAPYRL+SFMAKYVSGADLVGKS
Sbjct: 361 DVLLSDAPLIGAPYRLISFMAKYVSGADLVGKS 392

[Close]

BLAST of HG10020477 vs. NCBI nr
Match: XP_023540633.1 (uncharacterized protein LOC111800938 [Cucurbita pepo subsp. pepo] >XP_023540634.1 uncharacterized protein LOC111800938 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 521.5 bits (1342), Expect = 5.8e-144
Identity = 300/416 (72.12%), Postives = 329/416 (79.09%), Query Frame = 0


Query: 1   MENEKKKRKNKKKKNKPIRTSEDEMIVSESTSVDDTHMRNGQNDQNPISDTVDLSYQHSS 60
           MENEKKKRKNKKKKNK IRTSEDE+I SESTSVDDTH  NGQNDQNPIS TVD S QHS 
Sbjct: 1   MENEKKKRKNKKKKNKQIRTSEDEIIASESTSVDDTHTTNGQNDQNPISGTVDSSCQHSR 60

Query: 61  GTKD---------------------AKLEDTIKHLHEENNVHIQKMADLELKLVECEGEK 120
           GTKD                     AKLEDTIK LHEENNVH+QK+ADLELKLVE EGEK
Sbjct: 61  GTKDAVSEETNEHLRKESLLLAHDKAKLEDTIKRLHEENNVHMQKLADLELKLVEFEGEK 120

Query: 121 HSWLQKEAALVDKITSLQEDKTALDLEG---------------------KSSRETIIDKN 180
           HSWL+KE  LVDKI  LQEDKTALDLEG                      SS E I+DKN
Sbjct: 121 HSWLRKEETLVDKIRRLQEDKTALDLEGARLLHTIEQLERDKASLIFNENSSTEMIVDKN 180

Query: 181 KDISRLQARVVELEKQRHDLLQENKQLTENVADYQSKLLNLERKISSTYTHSSDRVTKEM 240
           KDISRL A+VVELE+QR DLLQENKQLTENVADYQSK+  LERKISST+THSSDRVTKEM
Sbjct: 181 KDISRLHAQVVELEEQRRDLLQENKQLTENVADYQSKITILERKISSTHTHSSDRVTKEM 240

Query: 241 LSSQVDAACILVDKLITENAELIGKVNELFVELQRVTKTELSPGVEPDQTAE-ATDTATF 300
           LSSQVDAA ILVDKLITENAELIGKVNEL+VELQRVTK E++ G+EPDQ  E ATDTATF
Sbjct: 241 LSSQVDAARILVDKLITENAELIGKVNELYVELQRVTKAEVNSGMEPDQMVEAATDTATF 300

Query: 301 NDPKPPLILNSITSSKSLDALKSVPIHNHSISNDFVELDNDFLAPKSS--MPLAAGEIEQ 360
           N+P+PPLI N +TSSKSLDAL+SVPIHNHS+ ++ +++D+D L   +S  +P+  GEIEQ
Sbjct: 301 NEPEPPLIHNMVTSSKSLDALESVPIHNHSVGDNIMDMDHDLLLSPTSLILPMEEGEIEQ 360

Query: 361 IPLHEIEDRNRDRELPATESDEKDVLLSDAPLIGAPYRLMSFMAKYVSGADLVGKS 372
           IP  E EDRNR+REL   ESDEKDVLLSDAPLIGAPYRL+SFMAKYVSGADLVGKS
Sbjct: 361 IPPQENEDRNRNRELSGAESDEKDVLLSDAPLIGAPYRLISFMAKYVSGADLVGKS 416

[Close]

BLAST of HG10020477 vs. NCBI nr
Match: XP_022971477.1 (UPF0430 protein CG31712 isoform X1 [Cucurbita maxima] >XP_022971478.1 UPF0430 protein CG31712 isoform X1 [Cucurbita maxima])

HSP 1 Score: 518.5 bits (1334), Expect = 4.9e-143
Identity = 299/415 (72.05%), Postives = 326/415 (78.55%), Query Frame = 0


Query: 1   MENEKKKRKNKKKKNKPIRTSEDEMIVSESTSVDDTHMRNGQNDQNPISDTVDLSYQHSS 60
           MENEKKKRKNKKKKNK IRTSED+ I SESTSVDDTH  NGQNDQNPIS TVD SYQHS 
Sbjct: 1   MENEKKKRKNKKKKNKQIRTSEDDTIASESTSVDDTHTTNGQNDQNPISGTVDPSYQHSR 60

Query: 61  GTKD---------------------AKLEDTIKHLHEENNVHIQKMADLELKLVECEGEK 120
            TKD                     AKLEDTIK LHEENN+H+QK+ADLELKLVE EGEK
Sbjct: 61  ETKDAVSEETNEHLRKESHLLAHDKAKLEDTIKRLHEENNLHMQKLADLELKLVEFEGEK 120

Query: 121 HSWLQKEAALVDKITSLQEDKTALDLEG---------------------KSSRETIIDKN 180
           HSWL+KE  LVDKI  LQEDKTALDLEG                      SS E I+DKN
Sbjct: 121 HSWLRKEETLVDKIRRLQEDKTALDLEGARLLHTIEQLERDKASLIFNENSSTEMIVDKN 180

Query: 181 KDISRLQARVVELEKQRHDLLQENKQLTENVADYQSKLLNLERKISSTYTHSSDRVTKEM 240
           KDISRLQA+VVELE+QR DLLQENKQLTENVADY+SK+  LERKISST+TH SDRVTKEM
Sbjct: 181 KDISRLQAQVVELEEQRRDLLQENKQLTENVADYRSKITILERKISSTHTHFSDRVTKEM 240

Query: 241 LSSQVDAACILVDKLITENAELIGKVNELFVELQRVTKTELSPGVEPDQTAE-ATDTATF 300
           LSSQVDAA ILVDKLITENAELIGKVN L+VELQRVTK E++ G+EPDQ  E ATDTATF
Sbjct: 241 LSSQVDAARILVDKLITENAELIGKVNALYVELQRVTKAEVNSGMEPDQMVESATDTATF 300

Query: 301 NDPKPPLILNSITSSKSLDALKSVPIHNHSISNDFVELDNDFLAPKSS--MPLAAGEIEQ 360
           NDPKPPLI N +TSSKSLDAL+SVPIHNHS+ ++ V++DND L   +S  +P+  GEIEQ
Sbjct: 301 NDPKPPLIHNMVTSSKSLDALESVPIHNHSVGDNVVDMDNDLLLSPTSLILPMEEGEIEQ 360

Query: 361 IPLHEIEDRNRDRELPATESDEKDVLLSDAPLIGAPYRLMSFMAKYVSGADLVGK 371
           IP  E EDRNR+REL   ESDEKDVLLSDAPLIGAPYRL+SFMAKYVSGADLVGK
Sbjct: 361 IPPQENEDRNRNRELSGAESDEKDVLLSDAPLIGAPYRLISFMAKYVSGADLVGK 415

[Close]

BLAST of HG10020477 vs. ExPASy TrEMBL
Match: A0A1S3B4X8 (uncharacterized protein LOC103486222 OS=Cucumis melo OX=3656 GN=LOC103486222 PE=4 SV=1)

HSP 1 Score: 567.8 bits (1462), Expect = 3.4e-158
Identity = 313/393 (79.64%), Postives = 341/393 (86.77%), Query Frame = 0


Query: 1   MENEKKKRKNKKKKNKPIRTSEDEMIVSESTSVDDTHMRNGQNDQNPISDTVDLSYQHSS 60
           M+N KKKRKNKKKKNK IRTSEDEM+VSESTSVDDTH RN QNDQNPISDT+ LSYQ SS
Sbjct: 1   MDNGKKKRKNKKKKNKQIRTSEDEMVVSESTSVDDTHPRNRQNDQNPISDTLLLSYQQSS 60

Query: 61  GTKDAKLEDTIKHLHEENNVHIQKMADLELKLVECEGEKHSWLQKEAALVDKITSLQEDK 120
             KDAKL+DTIKHLHEENN+HIQ+MADLELKLVECEGEKHSWLQKE AL+DKI +LQEDK
Sbjct: 61  AKKDAKLDDTIKHLHEENNIHIQRMADLELKLVECEGEKHSWLQKEEALMDKIRNLQEDK 120

Query: 121 TALDLEG---------------------KSSRETIIDKNKDISRLQARVVELEKQRHDLL 180
           T+LDLEG                     KSS+ETI+DKNKDISRLQA+VVELE+QR DLL
Sbjct: 121 TSLDLEGARLLNTIKLLERDKASLILDEKSSKETIVDKNKDISRLQAQVVELEEQRCDLL 180

Query: 181 QENKQLTENVADYQSKLLNLERKISSTYTHSSDRVTKEMLSSQVDAACILVDKLITENAE 240
            ENK+LTE VADYQSKLLNLERKISSTY HSSDRVTKE+L+SQVDAA ILVD+LITENAE
Sbjct: 181 HENKELTEKVADYQSKLLNLERKISSTYIHSSDRVTKEILNSQVDAARILVDRLITENAE 240

Query: 241 LIGKVNELFVELQRVTKTELSPGVEPDQTA-EATDTATFNDPKPPLILNSITSSKSLDAL 300
           LIGKVNELFVELQRVTKTELS GVEPDQ A EATDT TFNDP+PPLILNS+T  KS DAL
Sbjct: 241 LIGKVNELFVELQRVTKTELSSGVEPDQMAKEATDTTTFNDPEPPLILNSVTCGKSSDAL 300

Query: 301 KSVPIHNHSISNDFVELDNDFLAPKSSMPLAAGEIEQIPLHEIEDRNRDRELPATESDEK 360
            SVPIH+HSI  DFV+LD+D+LA KSSM +A GEIEQIPL + +DRNR+RELPATE DEK
Sbjct: 301 NSVPIHSHSIGGDFVDLDSDYLASKSSMRMATGEIEQIPLPQFDDRNRNRELPATEIDEK 360

Query: 361 DVLLSDAPLIGAPYRLMSFMAKYVSGADLVGKS 372
           DVLLSDAPLIGAPYRL+SFMAKYVSGADLVGKS
Sbjct: 361 DVLLSDAPLIGAPYRLISFMAKYVSGADLVGKS 393

[Close]

BLAST of HG10020477 vs. ExPASy TrEMBL
Match: A0A0A0L9P2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G727980 PE=4 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 1.6e-155
Identity = 309/393 (78.63%), Postives = 341/393 (86.77%), Query Frame = 0


Query: 1   MENEKKKRKNKKKKNKPIRTSEDEMIVSESTSVDDTHMRNGQNDQNPISDTVDLSYQHSS 60
           M+ EKKKRKNKKKKNK IRTSEDEM+VSESTSVDDTH RN QNDQNPISDT+ +SYQHSS
Sbjct: 1   MDKEKKKRKNKKKKNKQIRTSEDEMVVSESTSVDDTHPRNRQNDQNPISDTL-ISYQHSS 60

Query: 61  GTKDAKLEDTIKHLHEENNVHIQKMADLELKLVECEGEKHSWLQKEAALVDKITSLQEDK 120
           GTKDAKL+DTIKHLHEENN+HI++MADL+LKLVECEGEK+SWLQKE AL+DKI +LQEDK
Sbjct: 61  GTKDAKLDDTIKHLHEENNIHIKRMADLDLKLVECEGEKYSWLQKEEALMDKIRNLQEDK 120

Query: 121 TALDLEG---------------------KSSRETIIDKNKDISRLQARVVELEKQRHDLL 180
           TALDLEG                     KSSRETI+DKNKDISRLQA+VVELE+Q+ DLL
Sbjct: 121 TALDLEGARLLNIIKLLERDKASLILDEKSSRETIVDKNKDISRLQAQVVELEEQKRDLL 180

Query: 181 QENKQLTENVADYQSKLLNLERKISSTYTHSSDRVTKEMLSSQVDAACILVDKLITENAE 240
            ENKQLT  VADYQSKLLNLERKISSTY HSSDRVTKE+L+SQVDAA ILVDKLITENAE
Sbjct: 181 HENKQLTGKVADYQSKLLNLERKISSTYIHSSDRVTKEILNSQVDAARILVDKLITENAE 240

Query: 241 LIGKVNELFVELQRVTKTELSPGVEPDQTA-EATDTATFNDPKPPLILNSITSSKSLDAL 300
           LIGKVNELFVELQRVTKTEL  GV PDQ A EATDT TFN+ +PP+ILNS+TS KSLDAL
Sbjct: 241 LIGKVNELFVELQRVTKTELPSGVVPDQMATEATDTTTFNESEPPVILNSVTSGKSLDAL 300

Query: 301 KSVPIHNHSISNDFVELDNDFLAPKSSMPLAAGEIEQIPLHEIEDRNRDRELPATESDEK 360
           KSV IH+HSI  DFV+L +DF+A ++SMP+AAGEIEQI LH+ ED+N  RELPATE DEK
Sbjct: 301 KSVSIHSHSIGGDFVDLGSDFMASEASMPMAAGEIEQIQLHQFEDQNGTRELPATEIDEK 360

Query: 361 DVLLSDAPLIGAPYRLMSFMAKYVSGADLVGKS 372
           DVLLSDAPLIGAPYRL+SFMAKYVSGADLVGKS
Sbjct: 361 DVLLSDAPLIGAPYRLISFMAKYVSGADLVGKS 392

[Close]

BLAST of HG10020477 vs. ExPASy TrEMBL
Match: A0A6J1I220 (UPF0430 protein CG31712 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470185 PE=4 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 2.4e-143
Identity = 299/415 (72.05%), Postives = 326/415 (78.55%), Query Frame = 0


Query: 1   MENEKKKRKNKKKKNKPIRTSEDEMIVSESTSVDDTHMRNGQNDQNPISDTVDLSYQHSS 60
           MENEKKKRKNKKKKNK IRTSED+ I SESTSVDDTH  NGQNDQNPIS TVD SYQHS 
Sbjct: 1   MENEKKKRKNKKKKNKQIRTSEDDTIASESTSVDDTHTTNGQNDQNPISGTVDPSYQHSR 60

Query: 61  GTKD---------------------AKLEDTIKHLHEENNVHIQKMADLELKLVECEGEK 120
            TKD                     AKLEDTIK LHEENN+H+QK+ADLELKLVE EGEK
Sbjct: 61  ETKDAVSEETNEHLRKESHLLAHDKAKLEDTIKRLHEENNLHMQKLADLELKLVEFEGEK 120

Query: 121 HSWLQKEAALVDKITSLQEDKTALDLEG---------------------KSSRETIIDKN 180
           HSWL+KE  LVDKI  LQEDKTALDLEG                      SS E I+DKN
Sbjct: 121 HSWLRKEETLVDKIRRLQEDKTALDLEGARLLHTIEQLERDKASLIFNENSSTEMIVDKN 180

Query: 181 KDISRLQARVVELEKQRHDLLQENKQLTENVADYQSKLLNLERKISSTYTHSSDRVTKEM 240
           KDISRLQA+VVELE+QR DLLQENKQLTENVADY+SK+  LERKISST+TH SDRVTKEM
Sbjct: 181 KDISRLQAQVVELEEQRRDLLQENKQLTENVADYRSKITILERKISSTHTHFSDRVTKEM 240

Query: 241 LSSQVDAACILVDKLITENAELIGKVNELFVELQRVTKTELSPGVEPDQTAE-ATDTATF 300
           LSSQVDAA ILVDKLITENAELIGKVN L+VELQRVTK E++ G+EPDQ  E ATDTATF
Sbjct: 241 LSSQVDAARILVDKLITENAELIGKVNALYVELQRVTKAEVNSGMEPDQMVESATDTATF 300

Query: 301 NDPKPPLILNSITSSKSLDALKSVPIHNHSISNDFVELDNDFLAPKSS--MPLAAGEIEQ 360
           NDPKPPLI N +TSSKSLDAL+SVPIHNHS+ ++ V++DND L   +S  +P+  GEIEQ
Sbjct: 301 NDPKPPLIHNMVTSSKSLDALESVPIHNHSVGDNVVDMDNDLLLSPTSLILPMEEGEIEQ 360

Query: 361 IPLHEIEDRNRDRELPATESDEKDVLLSDAPLIGAPYRLMSFMAKYVSGADLVGK 371
           IP  E EDRNR+REL   ESDEKDVLLSDAPLIGAPYRL+SFMAKYVSGADLVGK
Sbjct: 361 IPPQENEDRNRNRELSGAESDEKDVLLSDAPLIGAPYRLISFMAKYVSGADLVGK 415

[Close]

BLAST of HG10020477 vs. ExPASy TrEMBL
Match: A0A6J1FUD8 (uncharacterized protein LOC111446955 OS=Cucurbita moschata OX=3662 GN=LOC111446955 PE=4 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 4.0e-143
Identity = 299/416 (71.88%), Postives = 327/416 (78.61%), Query Frame = 0


Query: 1   MENEKKKRKNKKKKNKPIRTSEDEMIVSESTSVDDTHMRNGQNDQNPISDTVDLSYQHSS 60
           MENEKKKRKNKKKKNK IRTSED+ I SESTSVDDTH  NGQNDQNPIS TVD SYQ S 
Sbjct: 1   MENEKKKRKNKKKKNKQIRTSEDDTIASESTSVDDTHTTNGQNDQNPISGTVDPSYQQSR 60

Query: 61  GTKD---------------------AKLEDTIKHLHEENNVHIQKMADLELKLVECEGEK 120
           GTKD                     AKLEDTIK LHEENNVH+QK+ADLELKLVE EGEK
Sbjct: 61  GTKDAVSEETNEHLRKESLLLAHDKAKLEDTIKRLHEENNVHMQKLADLELKLVEFEGEK 120

Query: 121 HSWLQKEAALVDKITSLQEDKTALDLEG---------------------KSSRETIIDKN 180
           HSWL+KE  LVDKI  LQEDKTALDLEG                      SS E I+DKN
Sbjct: 121 HSWLRKEETLVDKIRRLQEDKTALDLEGARLLHTIEQLERDKASLIFNENSSTEMIVDKN 180

Query: 181 KDISRLQARVVELEKQRHDLLQENKQLTENVADYQSKLLNLERKISSTYTHSSDRVTKEM 240
           KDISRLQA+VV LE+QR DLLQENKQLTENVADYQSK+  LERKISST+THSSDRVTKEM
Sbjct: 181 KDISRLQAQVVALEEQRRDLLQENKQLTENVADYQSKITILERKISSTHTHSSDRVTKEM 240

Query: 241 LSSQVDAACILVDKLITENAELIGKVNELFVELQRVTKTELSPGVEPDQTAEA-TDTATF 300
           LSSQVDAA ILVDKLITENAELIGKVNEL+VELQRVTK E++ G+EPDQ  EA T+TATF
Sbjct: 241 LSSQVDAARILVDKLITENAELIGKVNELYVELQRVTKAEVNSGMEPDQMVEATTNTATF 300

Query: 301 NDPKPPLILNSITSSKSLDALKSVPIHNHSISNDFVELDNDFLAPKSS--MPLAAGEIEQ 360
           N+P+PPLI N +TSSKSLDAL+SVPIHNHS+  + V++DND L   +S  +P+  GEIEQ
Sbjct: 301 NEPEPPLIHNMVTSSKSLDALESVPIHNHSVGYNIVDMDNDLLLSPTSLILPMEEGEIEQ 360

Query: 361 IPLHEIEDRNRDRELPATESDEKDVLLSDAPLIGAPYRLMSFMAKYVSGADLVGKS 372
           IP  E EDRNR+REL   ESDE+DVLLSDAPLIGAPYRL+SFMAKYVSGADLVGKS
Sbjct: 361 IPPQENEDRNRNRELSGAESDEEDVLLSDAPLIGAPYRLISFMAKYVSGADLVGKS 416

[Close]

BLAST of HG10020477 vs. ExPASy TrEMBL
Match: A0A6J1I8P0 (UPF0430 protein CG31712 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470185 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 6.4e-141
Identity = 289/394 (73.35%), Postives = 319/394 (80.96%), Query Frame = 0


Query: 1   MENEKKKRKNKKKKNKPIRTSEDEMIVSESTSVDDTHMRNGQNDQNPISDTVDLSYQHSS 60
           MENEKKKRKNKKKKNK IRTSED+ I SESTSVDDTH  NGQNDQNPIS TVD SYQHS 
Sbjct: 1   MENEKKKRKNKKKKNKQIRTSEDDTIASESTSVDDTHTTNGQNDQNPISGTVDPSYQHSR 60

Query: 61  GTKD---------------------AKLEDTIKHLHEENNVHIQKMADLELKLVECEGEK 120
            TKD                     AKLEDTIK LHEENN+H+QK+ADLELKLVE EGEK
Sbjct: 61  ETKDAVSEETNEHLRKESHLLAHDKAKLEDTIKRLHEENNLHMQKLADLELKLVEFEGEK 120

Query: 121 HSWLQKEAALVDKITSLQEDKTALDLEGKSSRETIIDKNKDISRLQARVVELEKQRHDLL 180
           HSWL+KEA L+  I  L+ DK +L     SS E I+DKNKDISRLQA+VVELE+QR DLL
Sbjct: 121 HSWLRKEARLLHTIEQLERDKASLIFNENSSTEMIVDKNKDISRLQAQVVELEEQRRDLL 180

Query: 181 QENKQLTENVADYQSKLLNLERKISSTYTHSSDRVTKEMLSSQVDAACILVDKLITENAE 240
           QENKQLTENVADY+SK+  LERKISST+TH SDRVTKEMLSSQVDAA ILVDKLITENAE
Sbjct: 181 QENKQLTENVADYRSKITILERKISSTHTHFSDRVTKEMLSSQVDAARILVDKLITENAE 240

Query: 241 LIGKVNELFVELQRVTKTELSPGVEPDQTAE-ATDTATFNDPKPPLILNSITSSKSLDAL 300
           LIGKVN L+VELQRVTK E++ G+EPDQ  E ATDTATFNDPKPPLI N +TSSKSLDAL
Sbjct: 241 LIGKVNALYVELQRVTKAEVNSGMEPDQMVESATDTATFNDPKPPLIHNMVTSSKSLDAL 300

Query: 301 KSVPIHNHSISNDFVELDNDFLAPKSS--MPLAAGEIEQIPLHEIEDRNRDRELPATESD 360
           +SVPIHNHS+ ++ V++DND L   +S  +P+  GEIEQIP  E EDRNR+REL   ESD
Sbjct: 301 ESVPIHNHSVGDNVVDMDNDLLLSPTSLILPMEEGEIEQIPPQENEDRNRNRELSGAESD 360

Query: 361 EKDVLLSDAPLIGAPYRLMSFMAKYVSGADLVGK 371
           EKDVLLSDAPLIGAPYRL+SFMAKYVSGADLVGK
Sbjct: 361 EKDVLLSDAPLIGAPYRLISFMAKYVSGADLVGK 394

[Close]

BLAST of HG10020477 vs. TAIR 10
Match: AT2G38580.1 (Mitochondrial ATP synthase D chain-related protein )

HSP 1 Score: 147.1 bits (370), Expect = 2.7e-35
Identity = 109/314 (34.71%), Postives = 176/314 (56.05%), Query Frame = 0


Query: 64  DAKLEDTIKHLHEENNVHIQKMADLELKLVECEGEKHSWLQKEAALVDKITSLQEDKTAL 123
           + KLE+ +     +N++ +++M+  E ++ +   E+ ++ QKEA+L  K+  LQ D+ +L
Sbjct: 207 EEKLEERLVQYKNKNDMLLREMSSTEAQMRQLLDERSTFTQKEASLEKKVQQLQHDEESL 266

Query: 124 DLEGKSSRETIIDKNKDISRLQARVVELEKQRHDLLQENKQLTENVADYQSKLLNLERKI 183
             E KSSRE I   N +I+RL+A+V ELEK + +LL++N+ L E +++ Q +  N     
Sbjct: 267 VAEEKSSREMISSLNNEIARLRAQVTELEKSKSNLLEQNQSLKETISNLQVQHEN----- 326

Query: 184 SSTYTHSSDRVTKEMLSSQVDAACILVDKLITENAELIGKVNELFVELQRVTKTELSPGV 243
              +  ++   ++E L+SQ++AAC LV+KLITENA+L+ KVNEL ++L +      S   
Sbjct: 327 ---HDSNAKGASEEELNSQIEAACTLVEKLITENADLVEKVNELCIKLNQ------SQHA 386

Query: 244 EPDQTAEATDTATFNDPKPPLILNSITSSKSLDALKSVPIHNHSISNDFVELDN--DFLA 303
            P+  A                   I   KS ++L+ +PIH     ++ + +DN  D   
Sbjct: 387 SPESLA-------------------IEVEKS-ESLEEIPIH-----DELIRIDNSRDMDT 446

Query: 304 PKSSMPLAAGEIEQ-IPLHEIEDRNRDRELPATESDEKD----VLLSDAPLIGAPYRLMS 363
                  + GEIE+ +PL    +   D E     + E +    V L+DAPLIGAP+RL+S
Sbjct: 447 ASIKRNFSEGEIEETVPLSLNANGEVDVESQVAVAGEDEINAGVPLADAPLIGAPFRLVS 481

Query: 364 FMAKYVSGADLVGK 371
           F+A+YVSGADL  K
Sbjct: 507 FVARYVSGADLAAK 481

The following BLAST results are available for this feature:

BLAST of HG10020477 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906167.1	5.9e-165	83.97	myosin-6 [Benincasa hispida] >XP_038906168.1 myosin-6 [Benincasa hispida] >XP_03...	[more]
XP_008442312.1	7.0e-158	79.64	PREDICTED: uncharacterized protein LOC103486222 [Cucumis melo] >XP_008442313.1 P...	[more]
XP_004137671.1	3.3e-155	78.63	uncharacterized protein LOC101221440 [Cucumis sativus] >KGN58680.1 hypothetical ...	[more]
XP_023540633.1	5.8e-144	72.12	uncharacterized protein LOC111800938 [Cucurbita pepo subsp. pepo] >XP_023540634....	[more]
XP_022971477.1	4.9e-143	72.05	UPF0430 protein CG31712 isoform X1 [Cucurbita maxima] >XP_022971478.1 UPF0430 pr...	[more]

BLAST of HG10020477 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10020477 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B4X8	3.4e-158	79.64	uncharacterized protein LOC103486222 OS=Cucumis melo OX=3656 GN=LOC103486222 PE=...	[more]
A0A0A0L9P2	1.6e-155	78.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G727980 PE=4 SV=1	[more]
A0A6J1I220	2.4e-143	72.05	UPF0430 protein CG31712 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470185 P...	[more]
A0A6J1FUD8	4.0e-143	71.88	uncharacterized protein LOC111446955 OS=Cucurbita moschata OX=3662 GN=LOC1114469...	[more]
A0A6J1I8P0	6.4e-141	73.35	UPF0430 protein CG31712 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470185 P...	[more]

BLAST of HG10020477 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38580.1	2.7e-35	34.71	Mitochondrial ATP synthase D chain-related protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 134..182
None	No IPR available	COILS	Coil	Coil	coord: 71..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 247..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 240..262

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020477.1	HG10020477.1	mRNA