HG10020439 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020439
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic
Location	Chr04: 31862335 .. 31862622 (-)
RNA-Seq Expression	HG10020439
Synteny	HG10020439

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTAAACCAAAATATGTTATTGCTATGGGAGCATGTACAATTACAGGAGGGATGTTCAGTACCGATTCTTATAGTGTTGTTCGGAGAATCGATAAGTTAATTCCTGTCGATGAGTATTTGTCGGGTTGTCCACCTAAACCCGAGGCTGTTATAGATGCTATAACAAAACTTCGTAAGAAAATATCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGAGGAGAATCGGTATTTTACTACTAACCACAAATTTCATGTTAATGAAAATGAGATTAAGCAATAA

mRNA sequence

ATGCCTAAACCAAAATATGTTATTGCTATGGGAGCATGTACAATTACAGGAGGGATGTTCAGTACCGATTCTTATAGTGTTGTTCGGAGAATCGATAAGTTAATTCCTGTCGATGAGTATTTGTCGGGTTGTCCACCTAAACCCGAGGCTGTTATAGATGCTATAACAAAACTTCGTAAGAAAATATCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGAGGAGAATCGGTATTTTACTACTAACCACAAATTTCATGTTAATGAAAATGAGATTAAGCAATAA

Coding sequence (CDS)

ATGCCTAAACCAAAATATGTTATTGCTATGGGAGCATGTACAATTACAGGAGGGATGTTCAGTACCGATTCTTATAGTGTTGTTCGGAGAATCGATAAGTTAATTCCTGTCGATGAGTATTTGTCGGGTTGTCCACCTAAACCCGAGGCTGTTATAGATGCTATAACAAAACTTCGTAAGAAAATATCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGAGGAGAATCGGTATTTTACTACTAACCACAAATTTCATGTTAATGAAAATGAGATTAAGCAATAA

Protein sequence

MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRYFTTNHKFHVNENEIKQ

Homology

[Close]

BLAST of HG10020439 vs. NCBI nr
Match: YP_009447454.1 (NADH dehydrogenase subunit K [Cucurbita maxima] >ALO22038.1 NdhK [Cucurbita ecuadorensis] >ALO22315.1 NdhK [Cucurbita maxima subsp. andreana] >ATY69871.1 NADH dehydrogenase subunit K [Cucurbita maxima])

HSP 1 Score: 169.1 bits (427), Expect = 1.9e-38
Identity = 81/88 (92.05%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1   MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRK 60
           MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRK
Sbjct: 96  MPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRK 155

Query: 61  KISREIYEDRIKSQEENRYFTTNHKFHV 89
           KISREIYEDRIKSQEENR+FTTNHKFHV
Sbjct: 156 KISREIYEDRIKSQEENRFFTTNHKFHV 183

[Close]

BLAST of HG10020439 vs. NCBI nr
Match: YP_010020248.1 (NADH-plastoquinone oxidoreductase subunit K [Gordonia alpestris] >QOJ51735.1 NADH-plastoquinone oxidoreductase subunit K [Gordonia alpestris])

HSP 1 Score: 168.3 bits (425), Expect = 3.2e-38
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1   MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRK 60
           MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRK
Sbjct: 96  MPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRK 155

Query: 61  KISREIYEDRIKSQEENRYFTTNHKFHV 89
           KISREIYEDRI+SQ+ENRYFTTNHKFHV
Sbjct: 156 KISREIYEDRIRSQQENRYFTTNHKFHV 183

[Close]

BLAST of HG10020439 vs. NCBI nr
Match: YP_009525190.1 (NADH-plastoquinone oxidoreductase subunit K [Hodgsonia macrocarpa] >YP_009751657.1 NADH dehydrogenase subunit K [Hodgsonia heteroclita] >AXR94528.1 NADH-plastoquinone oxidoreductase subunit K [Hodgsonia macrocarpa] >AXR94614.1 NADH-plastoquinone oxidoreductase subunit K [Hodgsonia macrocarpa] >AXR94698.1 NADH-plastoquinone oxidoreductase subunit K [Hodgsonia macrocarpa] >AXR94783.1 NADH-plastoquinone oxidoreductase subunit K [Hodgsonia macrocarpa] >QIT04390.1 NADH dehydrogenase subunit K [Hodgsonia heteroclita])

HSP 1 Score: 167.9 bits (424), Expect = 4.1e-38
Identity = 82/91 (90.11%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 1   MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRK 60
           MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRK
Sbjct: 96  MPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRK 155

Query: 61  KISREIYEDRIKSQEENRYFTTNHKFHVNEN 92
           KISREIYEDRIKSQEENR FTTNHKFHV  N
Sbjct: 156 KISREIYEDRIKSQEENRCFTTNHKFHVGPN 186

[Close]

BLAST of HG10020439 vs. NCBI nr
Match: QLJ92696.1 (NADH-plastoquinone oxidoreductase subunit K [Camellia sinensis] >QNN85035.1 NADH dehydrogenase subunit K [Camellia sinensis])

HSP 1 Score: 167.5 bits (423), Expect = 5.4e-38
Identity = 80/91 (87.91%), Postives = 85/91 (93.41%), Query Frame = 0


Query: 1   MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRK 60
           MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRK
Sbjct: 112 MPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRK 171

Query: 61  KISREIYEDRIKSQEENRYFTTNHKFHVNEN 92
           KISREIYEDRI+SQ+ENRYFTTNHKFHV  +
Sbjct: 172 KISREIYEDRIRSQQENRYFTTNHKFHVGRS 202

[Close]

BLAST of HG10020439 vs. NCBI nr
Match: AXR92940.1 (NADH-plastoquinone oxidoreductase subunit K [Camellia sinensis var. assamica] >AXR93025.1 NADH-plastoquinone oxidoreductase subunit K [Camellia sinensis var. assamica] >AXR93110.1 NADH-plastoquinone oxidoreductase subunit K [Camellia sinensis var. assamica] >AXR93195.1 NADH-plastoquinone oxidoreductase subunit K [Camellia sinensis var. assamica])

HSP 1 Score: 167.5 bits (423), Expect = 5.4e-38
Identity = 80/91 (87.91%), Postives = 85/91 (93.41%), Query Frame = 0


Query: 1   MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRK 60
           MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRK
Sbjct: 123 MPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRK 182

Query: 61  KISREIYEDRIKSQEENRYFTTNHKFHVNEN 92
           KISREIYEDRI+SQ+ENRYFTTNHKFHV  +
Sbjct: 183 KISREIYEDRIRSQQENRYFTTNHKFHVGRS 213

[Close]

BLAST of HG10020439 vs. ExPASy Swiss-Prot
Match: Q4VZH1 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhK PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 9.2e-41
Identity = 81/88 (92.05%), Postives = 83/88 (94.32%), Query Frame = 0


Query: 1   MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRK 60
           MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRK
Sbjct: 96  MPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRK 155

Query: 61  KISREIYEDRIKSQEENRYFTTNHKFHV 89
           KISREIYEDRIKSQEENR FTTNHKFHV
Sbjct: 156 KISREIYEDRIKSQEENRCFTTNHKFHV 183

[Close]

BLAST of HG10020439 vs. ExPASy Swiss-Prot
Match: Q06GZ3 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Drimys granadensis OX=224735 GN=ndhK PE=3 SV=2)

HSP 1 Score: 165.6 bits (418), Expect = 2.7e-40
Identity = 79/91 (86.81%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 1   MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRK 60
           MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRK
Sbjct: 96  MPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRK 155

Query: 61  KISREIYEDRIKSQEENRYFTTNHKFHVNEN 92
           K+SREIYEDRI SQ+ENRYFTTNHKFHV  +
Sbjct: 156 KVSREIYEDRIGSQQENRYFTTNHKFHVGRS 186

[Close]

BLAST of HG10020439 vs. ExPASy Swiss-Prot
Match: B0Z4L3 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera argillicola OX=3940 GN=ndhK PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 2.7e-40
Identity = 79/88 (89.77%), Postives = 83/88 (94.32%), Query Frame = 0


Query: 1   MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRK 60
           MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEA+IDAITKLRK
Sbjct: 96  MPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAIIDAITKLRK 155

Query: 61  KISREIYEDRIKSQEENRYFTTNHKFHV 89
           KISREIYEDRI+SQEENR FTTNHKFHV
Sbjct: 156 KISREIYEDRIRSQEENRCFTTNHKFHV 183

[Close]

BLAST of HG10020439 vs. ExPASy Swiss-Prot
Match: B0Z4U7 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera biennis OX=3942 GN=ndhK PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 2.7e-40
Identity = 79/88 (89.77%), Postives = 83/88 (94.32%), Query Frame = 0


Query: 1   MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRK 60
           MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEA+IDAITKLRK
Sbjct: 96  MPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAIIDAITKLRK 155

Query: 61  KISREIYEDRIKSQEENRYFTTNHKFHV 89
           KISREIYEDRI+SQEENR FTTNHKFHV
Sbjct: 156 KISREIYEDRIRSQEENRCFTTNHKFHV 183

[Close]

BLAST of HG10020439 vs. ExPASy Swiss-Prot
Match: Q9MTP4 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera elata subsp. hookeri OX=85636 GN=ndhK PE=3 SV=2)

HSP 1 Score: 165.6 bits (418), Expect = 2.7e-40
Identity = 79/88 (89.77%), Postives = 83/88 (94.32%), Query Frame = 0


Query: 1   MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRK 60
           MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEA+IDAITKLRK
Sbjct: 96  MPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAIIDAITKLRK 155

Query: 61  KISREIYEDRIKSQEENRYFTTNHKFHV 89
           KISREIYEDRI+SQEENR FTTNHKFHV
Sbjct: 156 KISREIYEDRIRSQEENRCFTTNHKFHV 183

[Close]

BLAST of HG10020439 vs. ExPASy TrEMBL
Match: A0A2H4T1W6 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucurbita maxima OX=3661 GN=ndhK PE=3 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 9.0e-39
Identity = 81/88 (92.05%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1   MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRK 60
           MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRK
Sbjct: 96  MPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRK 155

Query: 61  KISREIYEDRIKSQEENRYFTTNHKFHV 89
           KISREIYEDRIKSQEENR+FTTNHKFHV
Sbjct: 156 KISREIYEDRIKSQEENRFFTTNHKFHV 183

[Close]

BLAST of HG10020439 vs. ExPASy TrEMBL
Match: A0A0S2IFI4 (NADH-quinone oxidoreductase subunit B OS=Cucurbita maxima subsp. andreana OX=61888 GN=ndhK PE=3 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 9.0e-39
Identity = 81/88 (92.05%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1   MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRK 60
           MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRK
Sbjct: 96  MPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRK 155

Query: 61  KISREIYEDRIKSQEENRYFTTNHKFHV 89
           KISREIYEDRIKSQEENR+FTTNHKFHV
Sbjct: 156 KISREIYEDRIKSQEENRFFTTNHKFHV 183

[Close]

BLAST of HG10020439 vs. ExPASy TrEMBL
Match: A0A0S2IEN2 (NADH-quinone oxidoreductase subunit B OS=Cucurbita ecuadorensis OX=184135 GN=ndhK PE=3 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 9.0e-39
Identity = 81/88 (92.05%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1   MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRK 60
           MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRK
Sbjct: 96  MPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRK 155

Query: 61  KISREIYEDRIKSQEENRYFTTNHKFHV 89
           KISREIYEDRIKSQEENR+FTTNHKFHV
Sbjct: 156 KISREIYEDRIKSQEENRFFTTNHKFHV 183

[Close]

BLAST of HG10020439 vs. ExPASy TrEMBL
Match: A0A7L9DCG6 (NADH-quinone oxidoreductase subunit B OS=Gordonia alpestris OX=191082 GN=ndhK PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.5e-38
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1   MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRK 60
           MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRK
Sbjct: 96  MPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRK 155

Query: 61  KISREIYEDRIKSQEENRYFTTNHKFHV 89
           KISREIYEDRI+SQ+ENRYFTTNHKFHV
Sbjct: 156 KISREIYEDRIRSQQENRYFTTNHKFHV 183

[Close]

BLAST of HG10020439 vs. ExPASy TrEMBL
Match: A0A346QNL3 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Hodgsonia macrocarpa OX=2184935 GN=ndhK PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.0e-38
Identity = 82/91 (90.11%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 1   MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRK 60
           MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRK
Sbjct: 96  MPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRK 155

Query: 61  KISREIYEDRIKSQEENRYFTTNHKFHVNEN 92
           KISREIYEDRIKSQEENR FTTNHKFHV  N
Sbjct: 156 KISREIYEDRIKSQEENRCFTTNHKFHVGPN 186

[Close]

BLAST of HG10020439 vs. TAIR 10
Match: ATCG00430.1 (photosystem II reaction center protein G )

HSP 1 Score: 154.1 bits (388), Expect = 5.8e-38
Identity = 74/88 (84.09%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 1   MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRK 60
           MP+PKYVIAMGACTITGGMFSTDSYS VR +DKLIPVD YL GCPPKPEAVIDAITKLRK
Sbjct: 96  MPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRK 155

Query: 61  KISREIYEDRIKSQEENRYFTTNHKFHV 89
           KI+REIY+DRI+ Q+ NR FTTNHKF V
Sbjct: 156 KIAREIYKDRIRPQQGNRCFTTNHKFFV 183

[Close]

BLAST of HG10020439 vs. TAIR 10
Match: AT5G11770.1 (NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial )

HSP 1 Score: 71.2 bits (173), Expect = 4.9e-13
Identity = 32/64 (50.00%), Postives = 48/64 (75.00%), Query Frame = 0


Query: 1   MPKPKYVIAMGACTITGGMFSTDSYSVVRRIDKLIPVDEYLSGCPPKPEAVIDAITKLRK 60
           MP+P++VI+MG+C   GG +   SYSVVR  D+++PVD Y+ GCPP  EA++  + +L+K
Sbjct: 146 MPEPRWVISMGSCANGGGYYHY-SYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQK 205

Query: 61  KISR 65
           KI+R
Sbjct: 206 KINR 208

The following BLAST results are available for this feature:

BLAST of HG10020439 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009447454.1	1.9e-38	92.05	NADH dehydrogenase subunit K [Cucurbita maxima] >ALO22038.1 NdhK [Cucurbita ecua...	[more]
YP_010020248.1	3.2e-38	90.91	NADH-plastoquinone oxidoreductase subunit K [Gordonia alpestris] >QOJ51735.1 NAD...	[more]
YP_009525190.1	4.1e-38	90.11	NADH-plastoquinone oxidoreductase subunit K [Hodgsonia macrocarpa] >YP_009751657...	[more]
QLJ92696.1	5.4e-38	87.91	NADH-plastoquinone oxidoreductase subunit K [Camellia sinensis] >QNN85035.1 NADH...	[more]
AXR92940.1	5.4e-38	87.91	NADH-plastoquinone oxidoreductase subunit K [Camellia sinensis var. assamica] >A...	[more]

BLAST of HG10020439 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZH1	9.2e-41	92.05	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q06GZ3	2.7e-40	86.81	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Drimys granadensis OX...	[more]
B0Z4L3	2.7e-40	89.77	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera argillicola...	[more]
B0Z4U7	2.7e-40	89.77	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera biennis OX=...	[more]
Q9MTP4	2.7e-40	89.77	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera elata subsp...	[more]

BLAST of HG10020439 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2H4T1W6	9.0e-39	92.05	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucurbita maxima OX=3...	[more]
A0A0S2IFI4	9.0e-39	92.05	NADH-quinone oxidoreductase subunit B OS=Cucurbita maxima subsp. andreana OX=618...	[more]
A0A0S2IEN2	9.0e-39	92.05	NADH-quinone oxidoreductase subunit B OS=Cucurbita ecuadorensis OX=184135 GN=ndh...	[more]
A0A7L9DCG6	1.5e-38	90.91	NADH-quinone oxidoreductase subunit B OS=Gordonia alpestris OX=191082 GN=ndhK PE...	[more]
A0A346QNL3	2.0e-38	90.11	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Hodgsonia macrocarpa ...	[more]

BLAST of HG10020439 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00430.1	5.8e-38	84.09	photosystem II reaction center protein G	[more]
AT5G11770.1	4.9e-13	50.00	NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.12280		coord: 1..85 e-value: 1.4E-29 score: 104.5
None	No IPR available	PANTHER	PTHR11995:SF14	NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 7, MITOCHONDRIAL	coord: 1..91
None	No IPR available	PANTHER	PTHR11995	NADH DEHYDROGENASE	coord: 1..91
None	No IPR available	SUPERFAMILY	56770	HydA/Nqo6-like	coord: 1..71
IPR006137	NADH:ubiquinone oxidoreductase-like, 20kDa subunit	PFAM	PF01058	Oxidored_q6	coord: 1..58 e-value: 2.0E-15 score: 56.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020439.1	HG10020439.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0048038	quinone binding
molecular_function	GO:0051536	iron-sulfur cluster binding