HG10020424 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGCCTCTAGATTTATTTTCAGTGAAATAACTCAGAAATTTCCTATAATGCCTTTCACAGCAAGGTTTGTGATGTTTCTCATATGGCCACTGAATAATTTTCGTTTCTGCATCTCTACTGTCATATTTATAATCTCATAATTGTAGGGCTTTGGAAGAGAAAAGGGCTCGGCTTGGATTGGTGGAATGTGTTAACCATGATCTATTGCAACCATACCCTGTTCTTCATGAGAAGCCTGGTGAGTCTTCTAATGTCTGAGCTGCTTTTTGGCCTAAACTTTTCAATGTCTATTTTTTGCTGCATAACTAAATTCTGTGTTTATCAGGTGATTACGTTGCTCATATCAAATTCACCGTTTTGCTGATGCCTAATGGATCCGACCGAGTCACATCTCATCCTCTGCAAGATCTTCAGCCTACAAAAACAATAGACGATCCTGAAATCAAGGCATGGTTAGCATTGGGCACGAAGACAAAGAAAAAGGGTGGTGGAAAGAAGAAGAAAGGTTAGCTATCAAAAGATTTATCTCATGTTTATAAACTTTTTTTTGATAAGACCCCGCATTTTATTTTATTGTAATTAGAACTTTGGTTTAGTTTTGTGCTCAAACTGAGTCCAATGACCAACCATTGGTATACTCAGCATGGAAACAAACCAATGGCGTTCAGGTTACAAAATTGGCTTAACGGTTCAGTCTGTTGGTTTCGGTTGGACAAAAGAACATTTTTTCTGGCATTAACACAATTTTCTCATAATTTATGTGTGGTGCACTGATACTTATCGAGTACAAAATAATTTGTTGATCTGAGAATGCCCTTCCAGCCACTTTTTACCTACAGCAACCAATTGATATCTTTTTTTTTAAATAGGAATTTCATCTTCTGAACATTTACTCCATTATTGCAGGTAAGAAAGGAGATAAGACAGAGGACCCTACGGATGCTGAGCCAATGGATACCACAGCCAATGGTGCTGCATCCCAAGAATGA ATGAAAGCCTCTAGATTTATTTTCAGTGAAATAACTCAGAAATTTCCTATAATGCCTTTCACAGCAAGGGCTTTGGAAGAGAAAAGGGCTCGGCTTGGATTGGTGGAATGTGTTAACCATGATCTATTGCAACCATACCCTGTTCTTCATGAGAAGCCTGGTGATTACGTTGCTCATATCAAATTCACCGTTTTGCTGATGCCTAATGGATCCGACCGAGTCACATCTCATCCTCTGCAAGATCTTCAGCCTACAAAAACAATAGACGATCCTGAAATCAAGGCATGGTTAGCATTGGGCACGAAGACAAAGAAAAAGGGTGGTGGAAAGAAGAAGAAAGGTAAGAAAGGAGATAAGACAGAGGACCCTACGGATGCTGAGCCAATGGATACCACAGCCAATGGTGCTGCATCCCAAGAATGA ATGAAAGCCTCTAGATTTATTTTCAGTGAAATAACTCAGAAATTTCCTATAATGCCTTTCACAGCAAGGGCTTTGGAAGAGAAAAGGGCTCGGCTTGGATTGGTGGAATGTGTTAACCATGATCTATTGCAACCATACCCTGTTCTTCATGAGAAGCCTGGTGATTACGTTGCTCATATCAAATTCACCGTTTTGCTGATGCCTAATGGATCCGACCGAGTCACATCTCATCCTCTGCAAGATCTTCAGCCTACAAAAACAATAGACGATCCTGAAATCAAGGCATGGTTAGCATTGGGCACGAAGACAAAGAAAAAGGGTGGTGGAAAGAAGAAGAAAGGTAAGAAAGGAGATAAGACAGAGGACCCTACGGATGCTGAGCCAATGGATACCACAGCCAATGGTGCTGCATCCCAAGAATGA MKASRFIFSEITQKFPIMPFTARALEEKRARLGLVECVNHDLLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRVTSHPLQDLQPTKTIDDPEIKAWLALGTKTKKKGGGKKKKGKKGDKTEDPTDAEPMDTTANGAASQE Homology
BLAST of HG10020424 vs. NCBI nr
Match: XP_038905538.1 (ERBB-3 BINDING PROTEIN 1 [Benincasa hispida]) HSP 1 Score: 280.0 bits (715), Expect = 1.1e-71 Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of HG10020424 vs. NCBI nr
Match: KAA0044186.1 (ERBB-3 BINDING PROTEIN 1 [Cucumis melo var. makuwa] >TYK24946.1 ERBB-3 BINDING PROTEIN 1 [Cucumis melo var. makuwa]) HSP 1 Score: 275.8 bits (704), Expect = 2.1e-70 Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0
BLAST of HG10020424 vs. NCBI nr
Match: XP_008442393.1 (PREDICTED: ERBB-3 BINDING PROTEIN 1 [Cucumis melo]) HSP 1 Score: 275.8 bits (704), Expect = 2.1e-70 Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0
BLAST of HG10020424 vs. NCBI nr
Match: XP_023539747.1 (ERBB-3 BINDING PROTEIN 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 271.2 bits (692), Expect = 5.1e-69 Identity = 135/140 (96.43%), Postives = 137/140 (97.86%), Query Frame = 0
BLAST of HG10020424 vs. NCBI nr
Match: XP_022949494.1 (ERBB-3 BINDING PROTEIN 1 [Cucurbita moschata] >XP_022949502.1 ERBB-3 BINDING PROTEIN 1 [Cucurbita moschata] >KAG6596335.1 ERBB-3 BINDING PROTEIN 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027887.1 ERBB-3 BINDING PROTEIN 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 270.8 bits (691), Expect = 6.7e-69 Identity = 135/140 (96.43%), Postives = 136/140 (97.14%), Query Frame = 0
BLAST of HG10020424 vs. ExPASy Swiss-Prot
Match: M1CZC0 (ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum OX=4113 GN=EBP1 PE=2 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 1.4e-58 Identity = 114/131 (87.02%), Postives = 122/131 (93.13%), Query Frame = 0
BLAST of HG10020424 vs. ExPASy Swiss-Prot
Match: Q96327 (ERBB-3 BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=EBP1 PE=1 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 7.2e-50 Identity = 105/135 (77.78%), Postives = 116/135 (85.93%), Query Frame = 0
BLAST of HG10020424 vs. ExPASy Swiss-Prot
Match: P50580 (Proliferation-associated protein 2G4 OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=3) HSP 1 Score: 112.5 bits (280), Expect = 4.0e-24 Identity = 66/138 (47.83%), Postives = 87/138 (63.04%), Query Frame = 0
BLAST of HG10020424 vs. ExPASy Swiss-Prot
Match: Q6AYD3 (Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 4.0e-24 Identity = 66/138 (47.83%), Postives = 87/138 (63.04%), Query Frame = 0
BLAST of HG10020424 vs. ExPASy Swiss-Prot
Match: Q9UQ80 (Proliferation-associated protein 2G4 OS=Homo sapiens OX=9606 GN=PA2G4 PE=1 SV=3) HSP 1 Score: 112.1 bits (279), Expect = 5.2e-24 Identity = 66/138 (47.83%), Postives = 87/138 (63.04%), Query Frame = 0
BLAST of HG10020424 vs. ExPASy TrEMBL
Match: A0A5D3DMT2 (ERBB-3 BINDING PROTEIN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00620 PE=3 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 1.0e-70 Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0
BLAST of HG10020424 vs. ExPASy TrEMBL
Match: A0A1S3B5K8 (ERBB-3 BINDING PROTEIN 1 OS=Cucumis melo OX=3656 GN=LOC103486273 PE=3 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 1.0e-70 Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0
BLAST of HG10020424 vs. ExPASy TrEMBL
Match: A0A6J1GC78 (ERBB-3 BINDING PROTEIN 1 OS=Cucurbita moschata OX=3662 GN=LOC111452821 PE=3 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 3.2e-69 Identity = 135/140 (96.43%), Postives = 136/140 (97.14%), Query Frame = 0
BLAST of HG10020424 vs. ExPASy TrEMBL
Match: A0A6J1I1P8 (ERBB-3 BINDING PROTEIN 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470100 PE=3 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 1.2e-68 Identity = 134/140 (95.71%), Postives = 135/140 (96.43%), Query Frame = 0
BLAST of HG10020424 vs. ExPASy TrEMBL
Match: A0A6J1CVY2 (ERBB-3 BINDING PROTEIN 1 OS=Momordica charantia OX=3673 GN=LOC111015067 PE=3 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 1.6e-68 Identity = 132/140 (94.29%), Postives = 136/140 (97.14%), Query Frame = 0
BLAST of HG10020424 vs. TAIR 10
Match: AT3G51800.1 (metallopeptidase M24 family protein ) HSP 1 Score: 198.0 bits (502), Expect = 5.1e-51 Identity = 105/135 (77.78%), Postives = 116/135 (85.93%), Query Frame = 0
BLAST of HG10020424 vs. TAIR 10
Match: AT3G51800.2 (metallopeptidase M24 family protein ) HSP 1 Score: 190.3 bits (482), Expect = 1.1e-48 Identity = 105/144 (72.92%), Postives = 116/144 (80.56%), Query Frame = 0
BLAST of HG10020424 vs. TAIR 10
Match: AT3G51800.3 (metallopeptidase M24 family protein ) HSP 1 Score: 186.0 bits (471), Expect = 2.0e-47 Identity = 98/134 (73.13%), Postives = 108/134 (80.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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