HG10020397 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020397
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Mitochondrial inner membrane protease subunit 2
Location	Chr04: 31507192 .. 31510174 (-)
RNA-Seq Expression	HG10020397
Synteny	HG10020397

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAACCGAAATTTAGTGTGGAACGTTGCGAAGAAATGCTTCACATTTGGAATCATAGGGGTTACGGTTTCGGATCGTTATGCGAGTGTTGTCCCTATCCGAGGTGCTTCAATGTCTCCCACTTTTAATCCTAGAGCGACTTCTCTGGCAGGAACAGTGACTGGTAATTTTCTATACGCGGCATGTTTGTTGTAGCGAGATGATACCATCTGATGCTTGGATTTGGTTTCAGGTGACTATGTGCTAGTTGAGAAATTTTGCCTTGAGAAGTATAAATTTTCTCCCGGTGACGTGATTGTTTACCGGTTAGTTTCCCTTCATCGCTGCTAATATAGTTATCTGTGTTGTCTTGTTCTGGACGTTTATTTTGTGTATTGTGGTAATACCTTGAATTAATTTCTCTTTTATGGGATGATCCAGTGCATTGTATATGGATAGTCTTGCTGAATTGCTCAAGGTTCGAATCTTAAAAAGAGCAGGCTAGATAATTTAATATTTGGATTGGCTCTTCTTAGTGGAGAAATCACGTTTGGCCTCCAATTTATTAACTTCCCGAAGAACTGAAAATTAAGATAAGCTTAACTCCATGACCTGCAATTTGCATAGAATGAAATGGTTACTCTTCGGCAACCGGATTTTTGTTTTAGGGATTGGATTTTGTGGTAGGATAGTATTTGGATCAAGAGGAACAAGACTTTTTAGAGATTGGGAGAGACATTGGGAAAAGGTATGGTTGATTTATTTGGACCGATTTTCAGGGATTTTTTAAAAAAATTATCCGATTGGTGTTATTATTTTGAACTGAAGATCTTTTTTTGTATAGCCATAGCTAGTTGGTTAGCTTCTCTTAGTGGGCGGTCCTTTTCCATGCACTTCGGTATTCTTTTATTTTGTCTCAATGAAAACTCGGTTTCTCATAAAAATATTTTTATGAAAGAAATGCATAAGAAGTATATTTACTTAGTCACATTAAGTCATCCGAATTAATGGGTAGCACAGTGATCCATCTTTCTCTTGAAGTATTTTAGTACTGATGATGTATTTGAAGTGACTGAAAACATGTTAAGAGAGTATCAGATAGATAGAAAGCTCATTCCTATCATTTCATGCAGTGTTAAAAGATTAGAAAAGTAAGGATTAAATGTAAAAAATAATTCAGGACCTACTGAGCAGAAGATGTGTGTTTATCCCTTTCCTCTTGGATAAAGCTTTGCTTGAGTGTAGAGATGAAGACCTAGCAAGATTCTTGAGGTTAATAAAGGCTGGAGCCTAGTTTGAACTTTGGTGGATGTTCCATCTCATGGAGGGTGGTTTAAGATTAGGAGTCTTCCTCTTATGTTTCCTTGGTTTCTTTTTGTACTTTGAATATCATCCTTGAAAAGCTTAGTCTCTCAAAATTATTTTATCGGTCTATCTCAAACCATACGTAAATTGCTTATACTTTCCTGAACTTGAAGCAAGGTTGAGATAAAAAATATTTTCATTTCATGTAGGTCATATGTTTAACTGGAGAAAGGCAGAACCTTGTCACTTTTGCATCCTCTTTTCTTATATGAAATGTGCGAAATGTTTTTGATCCACACTTAGTGAACATGCTGTGATCACACTTCCCAATTTGTCACAACTTTACTCTCCGCGACTTGCACAATTTATATAAAATTTCCCTCCCGAAATTGTTGACCTGTTGCAGCTCCCCTTGTAATTACAAGGAGAAACATGTGAAAAGAATTATTGCCTTACCAGGAGATTGGGTTGGAACTCGTCAAACATATGATGTTGTCAAGGTTCCAGAGGGACATTGTTGGGTTGAAGGCGACAATGCAGAATGCAGCATGGACTCAAGATCTTTTGGCCCGGTAAGATACCGTCTGTACTATAATAAACATCTATTTCTTTTGGGGTATGCTATTAGTTTTGAGATGCAACCAGAGTCTCTATGGATGAGCAGCCTCAATCGGATCTCTAAATATTCTTGCAACTGTTTCTGGGACTTGAAAAACACAGTTGAAAATACCATCATTTTTTTTTGAGTTTAAAACTAAGTTATCGTAGAGGGCTCCACTTGTAAGTCTTTAGGATTTTATTGGATCCCTTTCCTGTTTTGGAGATGGTCTTTGATGTTTTATAGAAAATTAAGATACCAAAGAAAGTTAAGTTCTTTTCTTAGCAAGTTTTACTTAGTTGTGTGAACACGATGGATAGGCTTTTGAGAAAGATGCCTTCATTAATGGGTCCTTTTTGTTGTATCCTTTGTCGGTAGGCAGATGGAAACCTAGATCACCTTCTTTGGGGGTGTCAGTTTGTGAGTTTTGTGTGGAATTACTTCTTTTAGAAGTTTCATTTTGTGTTAGCTCACCAAAGGGATGGTTGTTTGATGATCGGGGAGTTCCTCCTTCATCTGCTTTTCAAAGAGAAAGGCCATTTTCTGTGGTTTGTGGGGGTGTGTGCTTTGTTGTGGGATCTTTGGGGAGAAAGAAATAATAGTGTTTAAAGGTGTGGATAGGGATCCTACTAAGGTTTGGTCCTTGGTGATGTTCCATATTTCTCTTTGGGCTTCGGTTTCAATTTTTTTTTTAATTATTCTCTAGGTACATCTTTTTGGGACATGGTTTTTTTGTATGCCCTTGTTTTCTTTCATTTTTTATCAATGAAAGAATTAGTTTTTTTTTTTAAATTAGTTTCTTTAAAACTAAGTTTTCATATGAAGTAGCATTTTAAGAAAATATATTTGTTAATTTACTTGTGCCATAGACATTTCTTGAAATATTTTACTGTAAGTATCTGATATATGTGAGTGCAATTTCTGTTTTATTTTTTTCACTCGAAAGACATGCCTAGTCCAGGCTGACTAAAGTAATTCTTTTGGTGGCAGATACCAATGGGTTTGATTCAAGGGAGGGTGTCACATATCGTATGGCCACCTCAAAGAATTGGTGCTGTTGAGAAAAAATATCCTCAGGGGAGAATCAAGTCCTACTAA

mRNA sequence

ATGGCAAACCGAAATTTAGTGTGGAACGTTGCGAAGAAATGCTTCACATTTGGAATCATAGGGGTTACGGTTTCGGATCGTTATGCGAGTGTTGTCCCTATCCGAGGTGCTTCAATGTCTCCCACTTTTAATCCTAGAGCGACTTCTCTGGCAGGAACAGTGACTGGTGACTATGTGCTAGTTGAGAAATTTTGCCTTGAGAAGTATAAATTTTCTCCCGGTGACGTGATTGTTTACCGCTCCCCTTGTAATTACAAGGAGAAACATGTGAAAAGAATTATTGCCTTACCAGGAGATTGGGTTGGAACTCGTCAAACATATGATGTTGTCAAGGTTCCAGAGGGACATTGTTGGGTTGAAGGCGACAATGCAGAATGCAGCATGGACTCAAGATCTTTTGGCCCGATACCAATGGGTTTGATTCAAGGGAGGGTGTCACATATCGTATGGCCACCTCAAAGAATTGGTGCTGTTGAGAAAAAATATCCTCAGGGGAGAATCAAGTCCTACTAA

Coding sequence (CDS)

ATGGCAAACCGAAATTTAGTGTGGAACGTTGCGAAGAAATGCTTCACATTTGGAATCATAGGGGTTACGGTTTCGGATCGTTATGCGAGTGTTGTCCCTATCCGAGGTGCTTCAATGTCTCCCACTTTTAATCCTAGAGCGACTTCTCTGGCAGGAACAGTGACTGGTGACTATGTGCTAGTTGAGAAATTTTGCCTTGAGAAGTATAAATTTTCTCCCGGTGACGTGATTGTTTACCGCTCCCCTTGTAATTACAAGGAGAAACATGTGAAAAGAATTATTGCCTTACCAGGAGATTGGGTTGGAACTCGTCAAACATATGATGTTGTCAAGGTTCCAGAGGGACATTGTTGGGTTGAAGGCGACAATGCAGAATGCAGCATGGACTCAAGATCTTTTGGCCCGATACCAATGGGTTTGATTCAAGGGAGGGTGTCACATATCGTATGGCCACCTCAAAGAATTGGTGCTGTTGAGAAAAAATATCCTCAGGGGAGAATCAAGTCCTACTAA

Protein sequence

MANRNLVWNVAKKCFTFGIIGVTVSDRYASVVPIRGASMSPTFNPRATSLAGTVTGDYVLVEKFCLEKYKFSPGDVIVYRSPCNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVEGDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGRIKSY

Homology

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BLAST of HG10020397 vs. NCBI nr
Match: XP_038887833.1 (LOW QUALITY PROTEIN: mitochondrial inner membrane protease subunit 2-like [Benincasa hispida])

HSP 1 Score: 349.0 bits (894), Expect = 2.3e-92
Identity = 161/165 (97.58%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   MANRNLVWNVAKKCFTFGIIGVTVSDRYASVVPIRGASMSPTFNPRATSLAGTVTGDYVL 60
           MANRNLVWN AKKCFTFGIIGVTVSDRYASVVPIRG SMSPTFNPRATSLAGTV+GDYVL
Sbjct: 53  MANRNLVWNAAKKCFTFGIIGVTVSDRYASVVPIRGVSMSPTFNPRATSLAGTVSGDYVL 112

Query: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEKYKFSPGDVIVYRSPCNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 113 VEKFCLEKYKFSPGDVIVYRSPCNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 172

Query: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQG 166
           GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIG VEKKYPQG
Sbjct: 173 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGVVEKKYPQG 217

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BLAST of HG10020397 vs. NCBI nr
Match: XP_022145503.1 (mitochondrial inner membrane protease subunit 2 [Momordica charantia])

HSP 1 Score: 344.7 bits (883), Expect = 4.4e-91
Identity = 160/169 (94.67%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 1   MANRNLVWNVAKKCFTFGIIGVTVSDRYASVVPIRGASMSPTFNPRATSLAGTVTGDYVL 60
           MANR+LVW VAKKCFTFGIIGVTVSDRYAS+VP+RGASMSPTFNPRATS AG VTGDYVL
Sbjct: 1   MANRSLVWGVAKKCFTFGIIGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEKYKFSPGDVIVY SP NYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGRIKS 170
           GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVE+KYPQGRIKS
Sbjct: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQGRIKS 169

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BLAST of HG10020397 vs. NCBI nr
Match: KAG7027898.1 (Vacuolar cation/proton exchanger 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 339.7 bits (870), Expect = 1.4e-89
Identity = 155/170 (91.18%), Postives = 165/170 (97.06%), Query Frame = 0


Query: 1   MANRNLVWNVAKKCFTFGIIGVTVSDRYASVVPIRGASMSPTFNPRATSLAGTVTGDYVL 60
           MANR+LVWNVAKKCFT GIIGVT+SDRYASVVPIRGASMSPTFNPRATSLAG V+ DYVL
Sbjct: 454 MANRSLVWNVAKKCFTLGIIGVTISDRYASVVPIRGASMSPTFNPRATSLAGPVSDDYVL 513

Query: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEK++FSPGDVIVYRSP NYKEKHVKR+IALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 514 VEKFCLEKFQFSPGDVIVYRSPSNYKEKHVKRVIALPGDWVGTRQTYDVVKVPEGHCWVE 573

Query: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGRIKSY 171
           GDN++CSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVE+ YPQGR+KSY
Sbjct: 574 GDNSDCSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERIYPQGRVKSY 623

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BLAST of HG10020397 vs. NCBI nr
Match: XP_023538829.1 (mitochondrial inner membrane protease subunit 2 [Cucurbita pepo subsp. pepo] >XP_023538830.1 mitochondrial inner membrane protease subunit 2 [Cucurbita pepo subsp. pepo] >KAG6596348.1 Mitochondrial inner membrane protease subunit 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 339.7 bits (870), Expect = 1.4e-89
Identity = 155/170 (91.18%), Postives = 165/170 (97.06%), Query Frame = 0


Query: 1   MANRNLVWNVAKKCFTFGIIGVTVSDRYASVVPIRGASMSPTFNPRATSLAGTVTGDYVL 60
           MANR+LVWNVAKKCFT GIIGVT+SDRYASVVPIRGASMSPTFNPRATSLAG V+ DYVL
Sbjct: 1   MANRSLVWNVAKKCFTLGIIGVTISDRYASVVPIRGASMSPTFNPRATSLAGPVSDDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEK++FSPGDVIVYRSP NYKEKHVKR+IALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLEKFQFSPGDVIVYRSPSNYKEKHVKRVIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGRIKSY 171
           GDN++CSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVE+ YPQGR+KSY
Sbjct: 121 GDNSDCSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERIYPQGRVKSY 170

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BLAST of HG10020397 vs. NCBI nr
Match: XP_022971541.1 (mitochondrial inner membrane protease subunit 2 [Cucurbita maxima] >XP_022971544.1 mitochondrial inner membrane protease subunit 2 [Cucurbita maxima])

HSP 1 Score: 339.3 bits (869), Expect = 1.9e-89
Identity = 155/170 (91.18%), Postives = 165/170 (97.06%), Query Frame = 0


Query: 1   MANRNLVWNVAKKCFTFGIIGVTVSDRYASVVPIRGASMSPTFNPRATSLAGTVTGDYVL 60
           MANR+LVWNVA+KCFT GIIGVTVSDRYASVVPIRGASMSPTFNPRATS AG V+ DYVL
Sbjct: 1   MANRSLVWNVARKCFTLGIIGVTVSDRYASVVPIRGASMSPTFNPRATSPAGPVSDDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEK++FSPGDVIVYRSP NYKEKHVKR+IALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLEKFQFSPGDVIVYRSPSNYKEKHVKRVIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGRIKSY 171
           GDN++CSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVE+KYPQGR+KSY
Sbjct: 121 GDNSDCSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQGRVKSY 170

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BLAST of HG10020397 vs. ExPASy Swiss-Prot
Match: Q6AZD4 (Mitochondrial inner membrane protease subunit 2 OS=Danio rerio OX=7955 GN=immp2l PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.2e-28
Identity = 61/150 (40.67%), Postives = 89/150 (59.33%), Query Frame = 0


Query: 20  IGVTVSDRYASVVPIRGASMSPTFNPRATSLAGTVTGDYVLVEKFCLEKYKFSPGDVIVY 79
           + VTV DR A V  + GASM P+ NP      G  + D VL+ ++ +  Y    GD++  
Sbjct: 24  VTVTVLDRLAYVARVEGASMQPSLNP-----DGESSPDVVLLNRWSVRNYHVQRGDIVSV 83

Query: 80  RSPCNYKEKHVKRIIALPGDWV---GTRQTYDVVKVPEGHCWVEGDNAECSMDSRSFGPI 139
            SP N ++K +KR+I + GD++   G +  Y  V+VP+GH W+EGD+   S DS +FGP+
Sbjct: 84  LSPKNPQQKIIKRVIGIEGDFIKTLGYKNRY--VRVPDGHLWIEGDHHGHSFDSNAFGPV 143

Query: 140 PMGLIQGRVSHIVWPPQRIGAVEKKYPQGR 167
            +GL+ GR SHI+WPP R   +E   P  R
Sbjct: 144 SLGLVHGRASHIIWPPSRWQRIEPSVPPDR 166

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BLAST of HG10020397 vs. ExPASy Swiss-Prot
Match: Q2KI92 (Mitochondrial inner membrane protease subunit 2 OS=Bos taurus OX=9913 GN=IMMP2L PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-26
Identity = 62/151 (41.06%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 20  IGVTVSDRYASVVPIRGASMSPTFNPRATSLAGTVTGDYVLVEKFCLEKYKFSPGDVIVY 79
           + VT  DR A V  + GASM P+ NP      G+ + D VL+  + +  ++   GD++  
Sbjct: 25  VAVTFLDRVACVARVEGASMQPSLNP-----GGSQSSDVVLLNHWKVRNFEVQRGDIVSL 84

Query: 80  RSPCNYKEKHVKRIIALPGDWV---GTRQTYDVVKVPEGHCWVEGDNAECSMDSRSFGPI 139
            SP N ++K +KR+IAL GD V   G +  Y  VKVP GH WVEGD+   S DS SFGP+
Sbjct: 85  VSPKNPEQKIIKRVIALEGDIVKTMGHKNRY--VKVPRGHIWVEGDHHGHSFDSNSFGPV 144

Query: 140 PMGLIQGRVSHIVWPPQRIGAVEKKYPQGRI 168
            +GL+    +HI+WPP+R   +E   P  R+
Sbjct: 145 SLGLLHAHATHILWPPKRWQKLESVLPPERL 168

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BLAST of HG10020397 vs. ExPASy Swiss-Prot
Match: Q96T52 (Mitochondrial inner membrane protease subunit 2 OS=Homo sapiens OX=9606 GN=IMMP2L PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-26
Identity = 61/151 (40.40%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 20  IGVTVSDRYASVVPIRGASMSPTFNPRATSLAGTVTGDYVLVEKFCLEKYKFSPGDVIVY 79
           + VT  DR A V  + GASM P+ NP      G+ + D VL+  + +  ++   GD++  
Sbjct: 25  VAVTFLDRVACVARVEGASMQPSLNP-----GGSQSSDVVLLNHWKVRNFEVHRGDIVSL 84

Query: 80  RSPCNYKEKHVKRIIALPGD---WVGTRQTYDVVKVPEGHCWVEGDNAECSMDSRSFGPI 139
            SP N ++K +KR+IAL GD    +G +  Y  VKVP GH WVEGD+   S DS SFGP+
Sbjct: 85  VSPKNPEQKIIKRVIALEGDIVRTIGHKNRY--VKVPRGHIWVEGDHHGHSFDSNSFGPV 144

Query: 140 PMGLIQGRVSHIVWPPQRIGAVEKKYPQGRI 168
            +GL+    +HI+WPP+R   +E   P  R+
Sbjct: 145 SLGLLHAHATHILWPPERWQKLESVLPPERL 168

[Close]

BLAST of HG10020397 vs. ExPASy Swiss-Prot
Match: Q8BPT6 (Mitochondrial inner membrane protease subunit 2 OS=Mus musculus OX=10090 GN=Immp2l PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.0e-26
Identity = 60/148 (40.54%), Postives = 86/148 (58.11%), Query Frame = 0


Query: 20  IGVTVSDRYASVVPIRGASMSPTFNPRATSLAGTVTGDYVLVEKFCLEKYKFSPGDVIVY 79
           + VT  DR A V  + G+SM P+ NP      G+ + D VL+  + +  ++   GD++  
Sbjct: 25  VAVTFLDRVACVARVEGSSMQPSLNP-----GGSQSSDVVLLNHWKVRNFEVQRGDIVSL 84

Query: 80  RSPCNYKEKHVKRIIALPGDWVGT-RQTYDVVKVPEGHCWVEGDNAECSMDSRSFGPIPM 139
            SP N ++K +KR+IAL GD V T      +VKVP GH WVEGD+   S DS SFGP+ +
Sbjct: 85  VSPKNPEQKIIKRVIALEGDIVRTIGHKNRLVKVPRGHMWVEGDHHGHSFDSNSFGPVSL 144

Query: 140 GLIQGRVSHIVWPPQRIGAVEKKYPQGR 167
           GL+    +HI+WPP+R   +E   P  R
Sbjct: 145 GLLHAHATHILWPPERWQRLESVLPPER 167

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BLAST of HG10020397 vs. ExPASy Swiss-Prot
Match: Q5PQ63 (Mitochondrial inner membrane protease subunit 2 OS=Xenopus laevis OX=8355 GN=immp2l PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 8.3e-24
Identity = 57/138 (41.30%), Postives = 78/138 (56.52%), Query Frame = 0


Query: 20  IGVTVSDRYASVVPIRGASMSPTFNPRATSLAGTVTGDYVLVEKFCLEKYKFSPGDVIVY 79
           + VT  DR A +  + G SM P+ NP A         D VL+ ++    Y    GD++  
Sbjct: 22  VTVTFLDRVACIARVEGVSMQPSLNPDARG-----ESDIVLLNRWRARNYDVQRGDIVSL 81

Query: 80  RSPCNYKEKHVKRIIALPGDWV---GTRQTYDVVKVPEGHCWVEGDNAECSMDSRSFGPI 139
            SP N ++K +KR+IAL GD V   G +  Y  VKVP GH WVEGD+   S DS +FGP+
Sbjct: 82  VSPKNPEQKIIKRVIALEGDIVKTLGHKNRY--VKVPRGHVWVEGDHHGHSFDSNAFGPV 141

Query: 140 PMGLIQGRVSHIVWPPQR 155
            +GL+    +HI+WPP R
Sbjct: 142 SLGLLHSHATHILWPPNR 152

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BLAST of HG10020397 vs. ExPASy TrEMBL
Match: A0A6J1CW41 (Mitochondrial inner membrane protease subunit 2 OS=Momordica charantia OX=3673 GN=LOC111014939 PE=3 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.1e-91
Identity = 160/169 (94.67%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 1   MANRNLVWNVAKKCFTFGIIGVTVSDRYASVVPIRGASMSPTFNPRATSLAGTVTGDYVL 60
           MANR+LVW VAKKCFTFGIIGVTVSDRYAS+VP+RGASMSPTFNPRATS AG VTGDYVL
Sbjct: 1   MANRSLVWGVAKKCFTFGIIGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEKYKFSPGDVIVY SP NYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGRIKS 170
           GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVE+KYPQGRIKS
Sbjct: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQGRIKS 169

[Close]

BLAST of HG10020397 vs. ExPASy TrEMBL
Match: A0A6J1I8V8 (Mitochondrial inner membrane protease subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111470229 PE=3 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 9.0e-90
Identity = 155/170 (91.18%), Postives = 165/170 (97.06%), Query Frame = 0


Query: 1   MANRNLVWNVAKKCFTFGIIGVTVSDRYASVVPIRGASMSPTFNPRATSLAGTVTGDYVL 60
           MANR+LVWNVA+KCFT GIIGVTVSDRYASVVPIRGASMSPTFNPRATS AG V+ DYVL
Sbjct: 1   MANRSLVWNVARKCFTLGIIGVTVSDRYASVVPIRGASMSPTFNPRATSPAGPVSDDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEK++FSPGDVIVYRSP NYKEKHVKR+IALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLEKFQFSPGDVIVYRSPSNYKEKHVKRVIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGRIKSY 171
           GDN++CSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVE+KYPQGR+KSY
Sbjct: 121 GDNSDCSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQGRVKSY 170

[Close]

BLAST of HG10020397 vs. ExPASy TrEMBL
Match: A0A6J1GA60 (Mitochondrial inner membrane protease subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111452339 PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.5e-89
Identity = 154/170 (90.59%), Postives = 165/170 (97.06%), Query Frame = 0


Query: 1   MANRNLVWNVAKKCFTFGIIGVTVSDRYASVVPIRGASMSPTFNPRATSLAGTVTGDYVL 60
           MANR+LVWNVAKKCFT GIIGVT+SDRYASVVPIRGASMSPTFNPRATSLAG V+ DYVL
Sbjct: 1   MANRSLVWNVAKKCFTLGIIGVTISDRYASVVPIRGASMSPTFNPRATSLAGPVSDDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCL+K++FSPGDVIVYRSP NYKEKHVKR+IALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLDKFQFSPGDVIVYRSPSNYKEKHVKRVIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGRIKSY 171
           GDN++CSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVE+ YPQGR+KSY
Sbjct: 121 GDNSDCSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERIYPQGRVKSY 170

[Close]

BLAST of HG10020397 vs. ExPASy TrEMBL
Match: A0A0A0LFB4 (Mitochondrial inner membrane protease subunit 2 OS=Cucumis sativus OX=3659 GN=Csa_3G731770 PE=3 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 7.6e-89
Identity = 156/165 (94.55%), Postives = 158/165 (95.76%), Query Frame = 0


Query: 1   MANRNLVWNVAKKCFTFGIIGVTVSDRYASVVPIRGASMSPTFNPRATSLAGTVTGDYVL 60
           MANRNLVWNV KK FTFGIIGVT+SDRYASVVPIRGASMSPTFNP ATSL G +TGDYVL
Sbjct: 1   MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEKYKFSPGDVIVYRSPCNYKEK VKRIIALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQG 166
           GDN ECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQG
Sbjct: 121 GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQG 165

[Close]

BLAST of HG10020397 vs. ExPASy TrEMBL
Match: A0A1S3B5N7 (Mitochondrial inner membrane protease subunit 2 OS=Cucumis melo OX=3656 GN=LOC103486302 PE=3 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 7.6e-89
Identity = 156/165 (94.55%), Postives = 158/165 (95.76%), Query Frame = 0


Query: 1   MANRNLVWNVAKKCFTFGIIGVTVSDRYASVVPIRGASMSPTFNPRATSLAGTVTGDYVL 60
           MANRNLVWNV KK FTFGIIGVT+SDRYASVVPIRGASMSPTFNP ATSL G +TGDYVL
Sbjct: 1   MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEKYKFSPGDVIVYRSPCNYKEK VKRIIALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQG 166
           GDN ECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQG
Sbjct: 121 GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQG 165

[Close]

BLAST of HG10020397 vs. TAIR 10
Match: AT3G08980.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 211.1 bits (536), Expect = 7.1e-55
Identity = 92/158 (58.23%), Postives = 124/158 (78.48%), Query Frame = 0


Query: 1   MANRNLVWNVAKKCFTFGIIGVTVSDRYASVVPIRGASMSPTFNPRATSLAGTVTGDYVL 60
           M  +N++W VAKK FT  IIG+T+SDR  SVVP+RG SMSPTFNP+  S       DYVL
Sbjct: 1   MGIQNILWQVAKKSFTGSIIGLTISDRCCSVVPVRGDSMSPTFNPQRNS----YLDDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           V+KFCL+ YKF+ GDV+V+ SP ++ ++++KRI+ +PG+W+ + +  DV++VPEGHCWVE
Sbjct: 61  VDKFCLKDYKFARGDVVVFSSPTHFGDRYIKRIVGMPGEWISSSR--DVIRVPEGHCWVE 120

Query: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAV 159
           GDN   S+DSRSFGPIP+GLIQGRV+ ++WPPQRI  +
Sbjct: 121 GDNKTSSLDSRSFGPIPLGLIQGRVTRVMWPPQRISKI 152

[Close]

BLAST of HG10020397 vs. TAIR 10
Match: AT1G53530.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 99.4 bits (246), Expect = 3.0e-21
Identity = 57/146 (39.04%), Postives = 75/146 (51.37%), Query Frame = 0


Query: 24  VSDRY-ASVVPIRGASMSPTFNPRATSLAGTVTGDYVLVEKFCLEKYKFSPGDVIVYRSP 83
           V+DRY  S   + G SM PT N         +TGD +L E       K   GDV++ RSP
Sbjct: 35  VTDRYIISTTHVHGPSMLPTLN---------LTGDVILAEHLSHRFGKIGLGDVVLVRSP 94

Query: 84  CNYKEKHVKRIIALPGDWVGTRQTYDV----------VKVPEGHCWVEGDNAECSMDSRS 143
            + K    KRI+ L GD    R T+            V VP+GH W++GDN   S DSR 
Sbjct: 95  RDPKRMVTKRILGLEGD----RLTFSADPLVGDASVSVLVPKGHVWIQGDNLYASTDSRH 154

Query: 144 FGPIPMGLIQGRVSHIVWPPQRIGAV 159
           FGP+P  LI+G+    VWPP+  G++
Sbjct: 155 FGPVPYSLIEGKALLRVWPPEYFGSL 167

[Close]

BLAST of HG10020397 vs. TAIR 10
Match: AT1G29960.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 90.9 bits (224), Expect = 1.1e-18
Identity = 50/127 (39.37%), Postives = 73/127 (57.48%), Query Frame = 0


Query: 36  GASMSPTFNPRATSLAGTVTGDYVLVEKFCLEKYKFSPGDVIVYRSPCNYKEKHVKRIIA 95
           G SM+PT +P         +G+ +L E+      K S GD++V RSP N  +  +KR+I 
Sbjct: 45  GPSMTPTLHP---------SGNVLLAERISKRYQKPSRGDIVVIRSPENPNKTPIKRVIG 104

Query: 96  LPGDWVG----TRQTYD--VVKVPEGHCWVEGDNAECSMDSRSFGPIPMGLIQGRVSHIV 155
           + GD +     +R++ +   + VP+GH +V+GD    S DSR+FG +P GLIQGRV   V
Sbjct: 105 IEGDCISFVIDSRKSDESQTIVVPKGHVFVQGDYTHNSRDSRNFGTVPYGLIQGRVLWRV 162

Query: 156 WPPQRIG 157
           WP Q  G
Sbjct: 165 WPFQDFG 162

[Close]

BLAST of HG10020397 vs. TAIR 10
Match: AT1G53530.2 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 90.1 bits (222), Expect = 1.8e-18
Identity = 50/130 (38.46%), Postives = 66/130 (50.77%), Query Frame = 0


Query: 39  MSPTFNPRATSLAGTVTGDYVLVEKFCLEKYKFSPGDVIVYRSPCNYKEKHVKRIIALPG 98
           M PT N         +TGD +L E       K   GDV++ RSP + K    KRI+ L G
Sbjct: 1   MLPTLN---------LTGDVILAEHLSHRFGKIGLGDVVLVRSPRDPKRMVTKRILGLEG 60

Query: 99  DWVGTRQTYDV----------VKVPEGHCWVEGDNAECSMDSRSFGPIPMGLIQGRVSHI 158
           D    R T+            V VP+GH W++GDN   S DSR FGP+P  LI+G+    
Sbjct: 61  D----RLTFSADPLVGDASVSVLVPKGHVWIQGDNLYASTDSRHFGPVPYSLIEGKALLR 117

[Close]

BLAST of HG10020397 vs. TAIR 10
Match: AT1G23465.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 83.6 bits (205), Expect = 1.7e-16
Identity = 44/116 (37.93%), Postives = 63/116 (54.31%), Query Frame = 0


Query: 36  GASMSPTFNPRATSLAGTVTGDYVLVEKFCLEKYKFSPGDVIVYRSPCNYKEKHVKRIIA 95
           G SM PT +P         +G+ +L E+      K S GD++V RSP N  +  +KR++ 
Sbjct: 45  GPSMIPTLHP---------SGNMLLAERISKRYQKPSRGDIVVIRSPENPNKTPIKRVVG 104

Query: 96  LPGDWVG------TRQTYDVVKVPEGHCWVEGDNAECSMDSRSFGPIPMGLIQGRV 146
           + GD +              + VP+GH +V+GD    S DSR+FGP+P GLIQGRV
Sbjct: 105 VEGDCISFVIDPVKSDESQTIVVPKGHVFVQGDYTHNSRDSRNFGPVPYGLIQGRV 151

The following BLAST results are available for this feature:

BLAST of HG10020397 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887833.1	2.3e-92	97.58	LOW QUALITY PROTEIN: mitochondrial inner membrane protease subunit 2-like [Benin...	[more]
XP_022145503.1	4.4e-91	94.67	mitochondrial inner membrane protease subunit 2 [Momordica charantia]	[more]
KAG7027898.1	1.4e-89	91.18	Vacuolar cation/proton exchanger 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023538829.1	1.4e-89	91.18	mitochondrial inner membrane protease subunit 2 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022971541.1	1.9e-89	91.18	mitochondrial inner membrane protease subunit 2 [Cucurbita maxima] >XP_022971544...	[more]

BLAST of HG10020397 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6AZD4	3.2e-28	40.67	Mitochondrial inner membrane protease subunit 2 OS=Danio rerio OX=7955 GN=immp2l...	[more]
Q2KI92	1.4e-26	41.06	Mitochondrial inner membrane protease subunit 2 OS=Bos taurus OX=9913 GN=IMMP2L ...	[more]
Q96T52	1.4e-26	40.40	Mitochondrial inner membrane protease subunit 2 OS=Homo sapiens OX=9606 GN=IMMP2...	[more]
Q8BPT6	4.0e-26	40.54	Mitochondrial inner membrane protease subunit 2 OS=Mus musculus OX=10090 GN=Immp...	[more]
Q5PQ63	8.3e-24	41.30	Mitochondrial inner membrane protease subunit 2 OS=Xenopus laevis OX=8355 GN=imm...	[more]

BLAST of HG10020397 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CW41	2.1e-91	94.67	Mitochondrial inner membrane protease subunit 2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1I8V8	9.0e-90	91.18	Mitochondrial inner membrane protease subunit 2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GA60	1.5e-89	90.59	Mitochondrial inner membrane protease subunit 2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0LFB4	7.6e-89	94.55	Mitochondrial inner membrane protease subunit 2 OS=Cucumis sativus OX=3659 GN=Cs...	[more]
A0A1S3B5N7	7.6e-89	94.55	Mitochondrial inner membrane protease subunit 2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of HG10020397 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08980.1	7.1e-55	58.23	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G53530.1	3.0e-21	39.04	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G29960.1	1.1e-18	39.37	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G53530.2	1.8e-18	38.46	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G23465.1	1.7e-16	37.93	Peptidase S24/S26A/S26B/S26C family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000223	Peptidase S26A, signal peptidase I	PRINTS	PR00727	LEADERPTASE	coord: 89..101 score: 54.76 coord: 27..43 score: 29.83 coord: 112..131 score: 52.86
IPR019533	Peptidase S26	PFAM	PF10502	Peptidase_S26	coord: 110..150 e-value: 1.1E-8 score: 35.2 coord: 9..105 e-value: 4.4E-13 score: 49.5
IPR019533	Peptidase S26	CDD	cd06530	S26_SPase_I	coord: 30..145 e-value: 3.50623E-24 score: 88.0263
None	No IPR available	GENE3D	2.10.109.10	Umud Fragment, subunit A	coord: 27..165 e-value: 2.5E-30 score: 107.0
IPR037730	Mitochondrial inner membrane protease subunit 2	PANTHER	PTHR46041	MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2	coord: 2..167
IPR036286	LexA/Signal peptidase-like superfamily	SUPERFAMILY	51306	LexA/Signal peptidase	coord: 30..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020397.1	HG10020397.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0033108	mitochondrial respiratory chain complex assembly
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0006627	protein processing involved in protein targeting to mitochondrion
biological_process	GO:0006465	signal peptide processing
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0042720	mitochondrial inner membrane peptidase complex
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0008236	serine-type peptidase activity